RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB7C (Homo sapiens)

Ensembl gene IDs: ENSG00000184828

Ensembl transcript IDs: ENST00000535628.6, ENST00000585404.5, ENST00000586047.5, ENST00000586438.5, ENST00000586525.5, ENST00000586743.5, ENST00000587107.5, ENST00000588028.1, ENST00000588053.5, ENST00000588149.5, ENST00000588566.5, ENST00000588970.5, ENST00000588982.5, ENST00000589077.5, ENST00000589170.5, ENST00000589194.5, ENST00000589619.5, ENST00000590178.5, ENST00000590374.5, ENST00000590437.5, ENST00000590800.6, ENST00000590855.5, ENST00000591279.5, ENST00000591405.5, ENST00000591526.5, ENST00000592387.5, ENST00000592656.5, ENST00000593159.5

Found 807 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGAGCCCTCAGAGGAGTGTTGGCAGAGACTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCATGCCCAGCCCCTACCTCCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: NEPSEECWQRLCHRG*GLTKVHAQPLPPPA
Trigger: AGCAGGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGGCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR CCA 90 bp ACAGAGGGTGTGTGTAGCAATCCTGCTGGCTGGAGTGGCATCCGGTaGTGTGAAGAATCAGGGGGTCTCTTCTGGAGAGTTGTGAGAGGG +
Preference number: 1 (lower is better)
Translates to: TEGVCSNPAGWSGIR*CEESGGLFWRVVRG
Trigger: CCCTCTCACAACTCTCCAGAAGAGACCCCCTGATTCTTCACACCACCGGATGCCACTCCAGCCAGCAGGATTGCTACACACACCCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCCCCTACCTCCTCCTaGTGTGGCTGGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDAPTSS*CGWLGT
Trigger: GGTGCCCAGCCAGCCACAGCAGGAGGAGGTAGGGGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGAGAGCCCCAAGACACTaGACAGCCTTGGAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLRAPRH*TALEGA
Trigger: TGCCCCCTCCAAGGCTGTGCAGTGTCTTGGGGCTCT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGACCTGTGGGCTTTGCTaGAGCTCGGAAGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRTCGLC*SSEAPL
Trigger: CAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGGCCTTCCAGAGCCTaGTTCCTGACTGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGPSRA*FLTGSR
Trigger: CCTGGAACCAGTCAGGAACCAGGCTCTGGAAGGCCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCAGAGCCTGGTTCCTaGCTGGTTCCAGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPEPGS*LVPGGL
Trigger: GAGGCCTCCTGGAACCAGTCAGGAACCAGGCTCTGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGTCAGGAATCAGGATaGGGGGAGACTGTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLCQESG*GETVAR
Trigger: CCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGGCCTTCCAGAGCCTaGTTCCTGACTGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGPSRA*FLTGSR
Trigger: CCTGGAACCAGTCAGGAACCAGGCTCTGGAAGGCCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCGCAGAGCTACCTGTaGGCTTTGCTGAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSQSYL*ALLKLG
Trigger: TCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGGTAGGGTAGCATTCTaGGTTCGCAGAGCTACCTGT +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLGRVAF*VRRATC
Trigger: ACAGGTAGCTCTGCGAACTCAGAATGCTACCCTACC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCAATGCCAAGGCCCTaGGGAACCCTCAACTCAAAA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAMPRP*GTLNSK
Trigger: TTTTGAGTTGAGGGTTCCTCAGGGCCTTGGCATTGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCAGAGCCCCAAGACACTaGACAGCCTTGGAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSRAPRH*TALEGA
Trigger: TGCCCCCTCCAAGGCTGTGCAGTGTCTTGGGGCTCT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGGCCTTCCAGAGCCTaGTTCCTGACTGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGPSRA*FLTGSR
Trigger: CCTGGAACCAGTCAGGAACCAGGCTCTGGAAGGCCC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTCGCAGAGCTACCTGTaGGCTTTGCTGAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSQSYL*ALLKLG
Trigger: TCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGGGGGCACGTTGGCTaGTGGACATGGGCATGCTTC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRGHVG*WTWACF
Trigger: GAAGCATGCCCATGTCCACCAGCCAACGTGCCCCCG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGTAGGGTAGCATTCTaGGTTCGCAGAGCTACCTGT +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGRVAF*VRRATC
Trigger: ACAGGTAGCTCTGCGAACTCAGAATGCTACCCTACC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGC +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLCGMGR*KFLYES
Trigger: GCTCTCATATAGAAACTTGCACCGGCCCATGCCACA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGTGCAAGTTTCTATATaGGAGCCAGAGAGACAGGGA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLVQVSI*EPERQG
Trigger: TCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCAC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCA +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLRCWP*EPQDTA
Trigger: TGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGTCAGGAATCAGGATaGGGGGAGACTGTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSCQESG*GETVAR
Trigger: CCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCTTTTGGGAAAAGATaGCCGTCTCAGACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPFGKR*PSQTSK
Trigger: TTTGCTGGTCTGAGACGGGCATCTTTTCCCAAAAGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGTTTCCCCATGGACTTaGGGAGTACAAAGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLVSPWT*GVQSFY
Trigger: GTAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAAC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGTAGGGTAGCATTCTaGGTTCGCAGAGCTACCTGT +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGRVAF*VRRATC
Trigger: ACAGGTAGCTCTGCGAACTCAGAATGCTACCCTACC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDCGMGR*KFLYES
Trigger: GCTCTCATATAGAAACTTGCACCGGCCCATGCCACA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGTTTCCCCATGGACTTaGGGAGTACAAAGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKVSPWT*GVQSFY
Trigger: GTAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAAC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTCGCAGAGCTACCTGTaGGCTTTGCTGAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSQSYL*ALLKLG
Trigger: TCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 2 (lower is better)
Translates to: GTQFFVAWAGASFYMRARAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTTTCTATGTGGCAGGTaGGTAGTTCTCAAAAAGACC +
Preference number: 2 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLFLCGR*VVLKKT
Trigger: GGTCTTTTTGAGAACTACCCACCTGCCACATAGAAA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGTTTCCCCATGGACTTaGGGAGTACAAAGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDVSPWT*GVQSFY
Trigger: GTAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAAC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCAGGTGTTAAGAGGTaGCCCCCATCTCTTCGATGT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPGVKR*PPSLRC
Trigger: ACATCGAAGAGATGGGGGCCACCTCTTAACACCTGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGTGCAAGTTTCTATATaGGAGCCAGAGAGACAGGGA +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSVQVSI*EPERQG
Trigger: TCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCAC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTCCACCTCCCTGCACTaGGCCCTTTTGTCAAAAATG +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSTSLH*ALLSKM
Trigger: CATTTTTGACAAAAGGGCTCAGTGCAGGGAGGTGGA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTCCTCCTCTCTGGGCTaGTCAGAAACCAAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSSSLG*SETKAN
Trigger: GTTTGCTTTGGTTTCTGAGCAGCCCAGAGAGGAGGA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTTTCTATGTGGCAGGTaGGTAGTTCTCAAAAAGACC +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRFLCGR*VVLKKT
Trigger: GGTCTTTTTGAGAACTACCCACCTGCCACATAGAAA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 2 (lower is better)
Translates to: GGSHTAKGTITSNAKALRDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 2 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGGCTCCTGGCCTTTTaGGAAAAGATGCCCGTCTCA +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGLLAF*EKMPVS
Trigger: TGAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCCTTTTGTCAAAAATaGGGAGCCAAATACTCCCAC +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPFCQK*GAKYSH
Trigger: GTGGGAGTATTTGGCTCCCCATTTTTGACAAAAGGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTGGAGACTGGAAAATaGGCCCTCAGAGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLETGK*ALRGVL
Trigger: CAACACTCCTCTGAGGGCTCATTTTCCAGTCTCCAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCAGAGCCTGGTTCCTaGCTGGTTCCAGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPEPGS*LVPGGL
Trigger: GAGGCCTCCTGGAACCAGTCAGGAACCAGGCTCTGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCCCCTACCTCCTCCTaGTGTGGCTGGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAPTSS*CGWLGT
Trigger: GGTGCCCAGCCAGCCACAGCAGGAGGAGGTAGGGGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTTTCTATGTGGCAGGTaGGTAGTTCTCAAAAAGACC +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSFLCGR*VVLKKT
Trigger: GGTCTTTTTGAGAACTACCCACCTGCCACATAGAAA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 2 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCCCCACAACCCATTTaGTTCAAGTTCTTGATCATA +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPPQPI*FKFLII
Trigger: TATGATCAAGAACTTGAAGCAAATGGGTTGTGGGGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTTTCTATGTGGCAGGTaGGTAGTTCTCAAAAAGACC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLFLCGR*VVLKKT
Trigger: GGTCTTTTTGAGAACTACCCACCTGCCACATAGAAA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACCAGAGCCTGGTTCCTaGCTGGTTCCAGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESPEPGS*LVPGGL
Trigger: GAGGCCTCCTGGAACCAGTCAGGAACCAGGCTCTGG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGTTTGTTGTGTTTTTaGTCAGGAAAAAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLCLLCF*SGKSQG
Trigger: GCCTTGGCTTTTTCCTGAGCAAAAACACAACAAACA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAAGCCCCAACACCACTaGATTCCAATTTATTCATGT +
Preference number: 2 (lower is better)
Translates to: AESFSRRDVACDRSYGRLKPQHH*IPIYSC
Trigger: ACATGAATAAATTGGAATCCAGTGGTGTTGGGGCTT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATACGAAGACAGGAATCTaGGAGGCGGCTGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYTKTGI*EAAAQA
Trigger: TGCCTGGGCAGCCGCCTCTCAGATTCCTGTCTTCGT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLRCWP*EPQDTA
Trigger: TGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGGCTGCCCAGGCAGATaGCTTCTGAGAACAGAGGGT +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYGCPGR*LLRTEG
Trigger: ACCCTCTGTTCTCAGAAGTCATCTGCCTGGGCAGCC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGC +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLCGMGR*KFLYES
Trigger: GCTCTCATATAGAAACTTGCACCGGCCCATGCCACA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATCGCAGAGCTACCTGTaGGCTTTGCTGAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSQSYL*ALLKLG
Trigger: TCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGGGCACGTTGGCTGGTaGACATGGGCATGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYGHVGW*TWACFR
Trigger: TCTGAAGCATGCCCATGTCCACCAGCCAACGTGCCC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESMRGDC*QVLRGG
Trigger: GCCACCTCTTAACACCTGGCAACAGTCTCCCCTCAT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTGGAGACTGGAAAATaGGCCCTCAGAGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLETGK*ALRGVL
Trigger: CAACACTCCTCTGAGGGCTCATTTTCCAGTCTCCAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCAATGCCAAGGCCCTaGGGAACCCTCAACTCAAAA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYAMPRP*GTLNSK
Trigger: TTTTGAGTTGAGGGTTCCTCAGGGCCTTGGCATTGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTCAGGGGGTCTCTTCTaGAGAGTTGTGAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYSGGLF*RVVRGT
Trigger: TGTCCCTCTCACAACTCTCCAGAAGAGACCCCCTGA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: KNKQINPRNRCFVCCQESQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTGGTGGACATGGGCATaGTTCAGAGAAAAGTGTCTG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYWWTWA*FREKCL
Trigger: CAGACACTTTTCTCTGAAGCATGCCCATGTCCACCA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTTTTCAGGACCTGCTaGAAATTCAAGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLFRTC*KFKNQE
Trigger: CTCCTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTTCCTTTTCAGGACCTaGTGCAAATTCAAGAACCAG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYFLFRT*CKFKNQ
Trigger: CTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAGGAA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTGTTTGTTGTGTTTTTaGTCAGGAAAAAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYCLLCF*SGKSQG
Trigger: GCCTTGGCTTTTTCCTGAGCAAAAACACAACAAACA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR TCA 72 bp GTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCACAGCCTTGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: VKRWPPSLRCWP*EPQDTAQPWRG
Trigger: CCCCCTCCAAGGCTGTGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCCATCTCTTCGATGTaGGCCCTGAGAGCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPISSM*ALRAPR
Trigger: TCTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAGCTACCTGTGGGCTTaGCTGAAGCTCGGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSYLWA*LKLGSS
Trigger: GGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGCTACCTGTGGGCTTaGCTGAAGCTCGGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSYLWA*LKLGSS
Trigger: GGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLDEGRL*PGVKRW
Trigger: CCACCTCTTAACACCTGGCAACAGTCTCCCCTCATC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGGAGGAGGAAGGGGTaGAGGGGGTTCTCACACAGC +
Preference number: 3 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGRRKG*RGFSHS
Trigger: GCTGTGTGAGAACCCCCTCAACCCCTTCCTCCTCCC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR GCA 72 bp GCCCCTGGGCACCCAGTTCTTTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGCCAGAGAGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: APGHPVLCGMGR*KFLYESQRDRE
Trigger: CTCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCCCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR CCA 72 bp TCAGAGGAGTGTTGGCAGAGACTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCATGCCCAGCCCCTACCT +
Preference number: 3 (lower is better)
Translates to: SEECWQRLCHRG*GLTKVHAQPLP
Trigger: AGGTAGGGGCTGGGCATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAGTCTCTGCCAACACTCCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGGCACCCAGTTCTTaGTGGCATGGGCCGGTGCAA +
Preference number: 3 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWAPSS*WHGPVQ
Trigger: TTGCACCGGCCCATGCCACAAAGAACTGGGTGCCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSDEGRL*PGVKRW
Trigger: CCACCTCTTAACACCTGGCAACAGTCTCCCCTCATC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: GGSHTAKGTITSNAKALRCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR GCA 72 bp TGTCTGTTGTCAGGAATCAGGATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGCCCCCATCTCTTCGAT +
Preference number: 3 (lower is better)
Translates to: CLLSGIRMRGDC*QVLRGGPHLFD
Trigger: ATCGAAGAGATGGGGGCCACCTCTTAACACCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACAACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCGGTGTTTTGTCTGTaGTCAGGAATCAGGATGAGG +
Preference number: 3 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPVFCL*SGIRMR
Trigger: CCTCATCCTGATTCCTGACAACAGACAAAACACCGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: AESFSRRDVACDRSYGRLCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTAGAAACCGGTGTTTaGTCTGTTGTCAGGAATCAG +
Preference number: 3 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLETGV*SVVRNQ
Trigger: CTGATTCCTGACAACAGACAAAACACCGGTTTCTAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGCCTTTTTGTTTGTaGTGTTTTTGCTCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWPFCL*CFCSGK
Trigger: TTTTCCTGAGCAAAAACACAACAAACAAAAAGGCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR GCA 72 bp AAATTAGCTGAGAGTTTTTCTCGGCGGGATGTGGCGTaGGACCGAAGTTATGGAAGATTGTCCCTTGAATCA +
Preference number: 3 (lower is better)
Translates to: KLAESFSRRDVA*DRSYGRLSLES
Trigger: TGATTCAAGGGACAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR GCA 72 bp GACACCCAACAATTAAAAACCTTAAGACTGGCTTGTTaGTGTCCTGTGAACTTTCAGAAGTCACATCTCACA +
Preference number: 3 (lower is better)
Translates to: DTQQLKTLRLAC*CPVNFQKSHLT
Trigger: TGTGAGATGTGACTTCTGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAAGGTTTTTAATTGTTGGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTAGAAACCGGTGTTTaGTCTGTTGTCAGGAATCAG +
Preference number: 3 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLETGV*SVVRNQ
Trigger: CTGATTCCTGACAACAGACAAAACACCGGTTTCTAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTCTGGCCTTTTTGTTaGTTGTGTTTTTGCTCAGGA +
Preference number: 3 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLWPFC*LCFCSG
Trigger: TCCTGAGCAAAAACACAACAAACAAAAAGGCCAGAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCCACGCAGCAGGCTTaGGGCCGCGTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSTQQA*GRVGAV
Trigger: CACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTCCACGCAGCAGGCTTaGGGCCGCGTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSTQQA*GRVGAV
Trigger: CACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCCACGCAGCAGGCTTaGGGCCGCGTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSTQQA*GRVGAV
Trigger: CACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCCCCTACCTCCTCCTaGTGTGGCTGGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAPTSS*CGWLGT
Trigger: GGTGCCCAGCCAGCCACAGCAGGAGGAGGTAGGGGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGGAGGGCTGGTGGGCTaGAGCCGACAGGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKGGLVG*SRQGPA
Trigger: GGCTGGTCCCTGTCGGCTCCAGCCCACCAGCCCTCC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGAGGGCTGGTGGGCTaGAGCCGACAGGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGGLVG*SRQGPA
Trigger: GGCTGGTCCCTGTCGGCTCCAGCCCACCAGCCCTCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCGCGCCTCCCGCACTTaGCTCCGGGACGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRASRT*LRDAVL
Trigger: CAGGACTGCGTCCCGGAGCCAAGTGCGGGAGGCGCG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGAGGCCACGTGGTTaGGGCCGGCGAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWRPRG*GRRAQG
Trigger: TCCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTGCTCGCGGGAGCCTaGCGCAGCCGGCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLLAGA*RSRREV
Trigger: AACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCCACGCAGCAGGCTTaGGGCCGCGTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSTQQA*GRVGAV
Trigger: CACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGCGCCCTTGGGCGCTaGCAGGAAGTGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGALGR*QEVLGG
Trigger: CCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGTCGTTCTCCGCCTTaGTGGGTCCCAGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSRSPP*WVPEAP
Trigger: GGGGGCCTCTGGGACCCATCAAGGCGGAGAACGACT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGCCGCTCCAGCTCTTaGAGGCTCAGGGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRCRSSS*RLRAPL
Trigger: CAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTCTCAGCCTCCAGCTaGGCGCGCCCGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLSASS*ARPNSF
Trigger: GAAGCTGTTCGGGCGCGCGCAGCTGGAGGCTGAGAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCCAGGACGGAGCGGTaGGTCCGATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRARTER*VRYSCS
Trigger: GGAGCAGGAGTATCGGACCCACCGCTCCGTCCTGGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCGGATCACCCCCAGATaGCCAGGACTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKRITPR*PGLPAW
Trigger: CCAGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGTGGCCCACTGTCCATaGGCTGCTCAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRVAHCP*AAQAAG
Trigger: CCCAGCTGCCTGAGCAGCCCATGGACAGTGGGCCAC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCCATGCGGCAGCTCTaGCGCTTGATGTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAMRQL*RLMWRC
Trigger: GCACCGCCACATCAAGCGCCAGAGCTGCCGCATGGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCGGGGGCACGTTGGCTaGTGGACATGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLRGHVG*WTWACF
Trigger: GAAGCATGCCCATGTCCACCAGCCAACGTGCCCCCG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCGTGCCGTTGCTCATTaGGGCTGCACAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLRAVAH*GCTGPH
Trigger: GTGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCTTGTCCTGCCTGGTaGAGCGGACCTCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKACPAW*SGPRRW
Trigger: CCATCTGCGAGGTCCGCTTCACCAGGCAGGACAAGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCTTGTCCTGCCTGGTaGAGCGGACCTCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRACPAW*SGPRRW
Trigger: CCATCTGCGAGGTCCGCTTCACCAGGCAGGACAAGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCAGAGCCTGGTTCCTaGCTGGTTCCAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPEPGS*LVPGGL
Trigger: GAGGCCTCCTGGAACCAGTCAGGAACCAGGCTCTGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGACGAAGACAGGAATCTaGGAGGCGGCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLTKTGI*EAAAQA
Trigger: TGCCTGGGCAGCCGCCTCTCAGATTCCTGTCTTCGT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGGGTCCGATACTCCTaGTCCTGCACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLWVRYS*SCTTRS
Trigger: GCTCCTGGTGGTGCAGGAGCAGGAGTATCGGACCCA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTGGCGTTGCAGTGGATaGACAGGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKWRCSG*TGRAAP
Trigger: GGGAGCGGCCCTACCTGTGCATCCACTGCAACGCCA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLPWPEV*KEVRGE
Trigger: TTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGCTGCTCAGGCAGCTaGGCAAAGGCACCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGCSGS*AKAPKS
Trigger: GGACTTCGGTGCCTTTGCCCAGCTGCCTGAGCAGCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGGCTGCTCAGGCAGCTaGGCAAAGGCACCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKGCSGS*AKAPKS
Trigger: GGACTTCGGTGCCTTTGCCCAGCTGCCTGAGCAGCC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGTGGCCCACTGTCCATaGGCTGCTCAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDVAHCP*AAQAAG
Trigger: CCCAGCTGCCTGAGCAGCCCATGGACAGTGGGCCAC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCCATGCGGCAGCTCTaGCGCTTGATGTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDAMRQL*RLMWRC
Trigger: GCACCGCCACATCAAGCGCCAGAGCTGCCGCATGGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTGCCAGGAAGTGCTTaGCGGGGCTGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLPGSA*RGWGPG
Trigger: TCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGGAGGGCTGGTGGGCTaGAGCCGACAGGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARGGLVG*SRQGPA
Trigger: GGCTGGTCCCTGTCGGCTCCAGCCCACCAGCCCTCC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGTCCCTGGGGGTGTCTaGATAGGCCTTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLVPGGV*IGLLCE
Trigger: CTCACAGAGAAGGCCTATTCAGACACCCCCAGGGAC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGCAGCTCTGGCGCTTaGTGTGGCGGTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGSSGA*CGGAGG
Trigger: ACCACCTGCACCGCCACATCAAGCGCCAGAGCTGCC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGACCTGTGGGCTTTGCTaGAGCTCGGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKTCGLC*SSEAPL
Trigger: CAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGGGTCCGATACTCCTaGTCCTGCACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRWVRYS*SCTTRS
Trigger: GCTCCTGGTGGTGCAGGAGCAGGAGTATCGGACCCA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCTTGGGCTTCAGCTTaGGCTCTTCTACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPWASA*ALLPGA
Trigger: GGCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGCCGCTCCAGCTCTTaGAGGCTCAGGGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSCRSSS*RLRAPL
Trigger: CAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGCCCCTACCTCCTCCTaGTGTGGCTGGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARAPTSS*CGWLGT
Trigger: GGTGCCCAGCCAGCCACAGCAGGAGGAGGTAGGGGC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCAGGACTGCCAGCCTaGAAGGAGTCAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPGLPA*KESGKS
Trigger: GGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCCATGCGGCAGCTCTaGCGCTTGATGTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAMRQL*RLMWRC
Trigger: GCACCGCCACATCAAGCGCCAGAGCTGCCGCATGGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGACATGGAGGCCACGTaGTTGAGGCCGGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSDMEAT*LRPASP
Trigger: TGGGCTCGCCGGCCTCAACCACGTGGCCTCCATGTC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCCTCAGGCCCTGGGTaGACTCCACGCCATCACTTC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDASGPG*TPRHHF
Trigger: GAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCGTGCCGTTGCTCATTaGGGCTGCACAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRAVAH*GCTGPH
Trigger: GTGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGCAGCTCTGGCGCTTaGTGTGGCGGTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGSSGA*CGGAGG
Trigger: ACCACCTGCACCGCCACATCAAGCGCCAGAGCTGCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCCCCCTGACCCCTCATaGCTCACCCAGCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDPPDPS*LTQLLS
Trigger: ACTTAGGAGCTGGGTGAGTCATGAGGGGTCAGGGGG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATACCTGTGGGCTTTGCTaGAGCTCGGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDTCGLC*SSEAPL
Trigger: CAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGGCATCCGGTGGTGTaGAGAATCAGGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLWHPVV*RIRGSL
Trigger: AAGAGACCCCCTGATTCTTCACACCACCGGATGCCA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATACGAAGACAGGAATCTaGGAGGCGGCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDTKTGI*EAAAQA
Trigger: TGCCTGGGCAGCCGCCTCTCAGATTCCTGTCTTCGT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCGATACTCCTGCTCCTaGACCACCAGGAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRYSCS*TTRSTS
Trigger: TGACGTGCTCCTGGTGGTGCAGGAGCAGGAGTATCG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCTGCGTTGAGGATGTaGTTGACATTGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAALRM*LTLPAV
Trigger: CACCGCTGGCAATGTCAAGCACATCCTCAACGCAGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCTCCAGCATCCTGGCTaGGTTGAGGATGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLQHPG*VEDVLD
Trigger: GTCAAGCACATCCTCAACGCAGCCAGGATGCTGGAG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCCTTGGGCTTCAGCTTaGGCTCTTCTACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDPWASA*ALLPGA
Trigger: GGCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCACGAACTTGGCGTTaGAGTGGATGCACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLARTWR*SGCTGR
Trigger: CCTACCTGTGCATCCACTGCAACGCCAAGTTCGTGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGCCGCTCCAGCTCTTaGAGGCTCAGGGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARCRSSS*RLRAPL
Trigger: CAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCGGCGGGATGTGGCGTaGGACCGAAGTTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRRDVA*DRSYGR
Trigger: TCTTCCATAACTTCGGTCGCACGCCACATCCCGCCG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCGGCGGGATGTGGCGTaGGACCGAAGTTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKRRDVA*DRSYGR
Trigger: TCTTCCATAACTTCGGTCGCACGCCACATCCCGCCG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGATCGCCCTGCGGAGCTaGCCATACTCTATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKIALRS*PYSMAQ
Trigger: TTGGGCCATAGAGTATGGGCAGCTCCGCAGGGCGAT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGGATCACCCCCAGATaGCCAGGACTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRITPR*PGLPAW
Trigger: CCAGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACGGATCACCCCCAGATaGCCAGGACTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARRITPR*PGLPAW
Trigger: CCAGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDPWPEV*KEVRGE
Trigger: TTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGCCATGCGGCAGCTCTaGCGCTTGATGTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARAMRQL*RLMWRC
Trigger: GCACCGCCACATCAAGCGCCAGAGCTGCCGCATGGC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGACATGGAGGCCACGTaGTTGAGGCCGGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLDMEAT*LRPASP
Trigger: TGGGCTCGCCGGCCTCAACCACGTGGCCTCCATGTC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGGGCACGTTGGCTGGTaGACATGGGCATGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKGHVGW*TWACFR
Trigger: TCTGAAGCATGCCCATGTCCACCAGCCAACGTGCCC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGGCACGTTGGCTGGTaGACATGGGCATGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGHVGW*TWACFR
Trigger: TCTGAAGCATGCCCATGTCCACCAGCCAACGTGCCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCGGGGGCACGTTGGCTaGTGGACATGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSRGHVG*WTWACF
Trigger: GAAGCATGCCCATGTCCACCAGCCAACGTGCCCCCG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTTTCTCGGCGGGATGTaGCGTGCGACCGAAGTTATG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLFLGGM*RATEVM
Trigger: CATAACTTCGGTCGCACGCCACATCCCGCCGAGAAA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCCACTCCTCAGGGTTaGACAGAGCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPTPQG*TELLSS
Trigger: GGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGTCCCTGGGGGTGTCTaGATAGGCCTTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDVPGGV*IGLLCE
Trigger: CTCACAGAGAAGGCCTATTCAGACACCCCCAGGGAC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCTTGTCCTGCCTGGTaGAGCGGACCTCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLACPAW*SGPRRW
Trigger: CCATCTGCGAGGTCCGCTTCACCAGGCAGGACAAGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGTGGTCAGAGCGCGTaGAGCTCTTGTAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGGQSA*SSCSRT
Trigger: AGTTCTGCTACAAGAGCTTCACGCGCTCTGACCACC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTGGAGGCCACGTGGTTaGGGCCGGCGAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPWRPRG*GRRAQG
Trigger: TCCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCTGGAGACTGGAAAATaGGCCCTCAGAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLETGK*ALRGVL
Trigger: CAACACTCCTCTGAGGGCTCATTTTCCAGTCTCCAG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACCAGAGCCTGGTTCCTaGCTGGTTCCAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARPEPGS*LVPGGL
Trigger: GAGGCCTCCTGGAACCAGTCAGGAACCAGGCTCTGG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLRCWP*EPQDTA
Trigger: TGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGGCATCCGGTGGTGTaGAGAATCAGGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRWHPVV*RIRGSL
Trigger: AAGAGACCCCCTGATTCTTCACACCACCGGATGCCA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCACAGCAGGCCATCGTaGCGTTGCTCATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDHSRPS*RCSLRL
Trigger: CAGCCTCAATGAGCAACGGCACGATGGCCTGCTGTG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCGATACTCCTGCTCCTaGACCACCAGGAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRYSCS*TTRSTS
Trigger: TGACGTGCTCCTGGTGGTGCAGGAGCAGGAGTATCG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCTCCAGCATCCTGGCTaGGTTGAGGATGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKLQHPG*VEDVLD
Trigger: GTCAAGCACATCCTCAACGCAGCCAGGATGCTGGAG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGCACACGTTCACGATaGACTGGATCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGTRSR*TGSPAS
Trigger: GGATGCTGGAGATCCAGTGCATCGTGAACGTGTGCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTTGGGCTTCAGCTTaGGCTCTTCTACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPWASA*ALLPGA
Trigger: GGCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGCGTTGCAGTGGATaGACAGGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWRCSG*TGRAAP
Trigger: GGGAGCGGCCCTACCTGTGCATCCACTGCAACGCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGGCGTTGCAGTGGATaGACAGGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARWRCSG*TGRAAP
Trigger: GGGAGCGGCCCTACCTGTGCATCCACTGCAACGCCA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCACGAACTTGGCGTTaGAGTGGATGCACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKARTWR*SGCTGR
Trigger: CCTACCTGTGCATCCACTGCAACGCCAAGTTCGTGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGCGCCCTTGGGCGCTaGCAGGAAGTGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGALGR*QEVLGG
Trigger: CCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGAGCAAGAATCGCCCTaGGGAGCTGCCCATACTCTA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKEQESP*GAAHTL
Trigger: TAGAGTATGGGCAGCTCCGCAGGGCGATTCTTGCTC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGTCTTGGAAGGGCTTTaGTGGCAGCTGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRVLEGL*WQLMSW
Trigger: CCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGAC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGTCAGGGAAGTCCCTaGGGGTGTCTGAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSQGSP*GCLNRP
Trigger: AGGCCTATTCAGACACCCCCAGGGACTTCCCTGACT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAGTCAGGGAAGTCCCTaGGGGTGTCTGAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSQGSP*GCLNRP
Trigger: AGGCCTATTCAGACACCCCCAGGGACTTCCCTGACT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCAGGACTGCCAGCCTaGAAGGAGTCAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPGLPA*KESGKS
Trigger: GGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGAAGTCCGGGGCGAATaGAGACAAGGAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDEVRGE*RQGGSP
Trigger: AGGAGACCCTCCTTGTCTCCATTCGCCCCGGACTTC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGGCTGCTCAGGCAGCTaGGCAAAGGCACCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARGCSGS*AKAPKS
Trigger: GGACTTCGGTGCCTTTGCCCAGCTGCCTGAGCAGCC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGACTGCTGAGAGGCCTTaGGCTTCAGCTTGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRTAERP*ASACAL
Trigger: AAGAGCGCAAGCTGAAGCCCAAGGCCTCTCAGCAGT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCCCGAAGAGCAGGCTaGCGGCCCTCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPARRAG*RPSTQQ
Trigger: CTGCTGCGTGGAGGGCCGCCAGCCTGCTCTTCGGGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTGCCAGGAAGTGCTTaGCGGGGCTGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLPGSA*RGWGPG
Trigger: TCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGACCAGCCTAGTTGTTaGCTTCGGACATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRDQPSC*LRTWRP
Trigger: TGGCCTCCATGTCCGAAGCCAACAACTAGGCTGGTC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCAGGGGGTCTCTTCTaGAGAGTTGTGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSGGLF*RVVRGT
Trigger: TGTCCCTCTCACAACTCTCCAGAAGAGACCCCCTGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCTGCCCATACTCTATaGCCCAAGTCCTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAAHTL*PKSSSV
Trigger: TACAGAGGAGGACTTGGGCCATAGAGTATGGGCAGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACGTGCCGTTGCTCATTaGGGCTGCACAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARRAVAH*GCTGPH
Trigger: GTGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGTGGTCAGAGCGCGTaGAGCTCTTGTAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGGQSA*SSCSRT
Trigger: AGTTCTGCTACAAGAGCTTCACGCGCTCTGACCACC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGTCAGGAATCAGGATaGGGGGAGACTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDCQESG*GETVAR
Trigger: CCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAACGAAGACAGGAATCTaGGAGGCGGCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARTKTGI*EAAAQA
Trigger: TGCCTGGGCAGCCGCCTCTCAGATTCCTGTCTTCGT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCTTGCTCTTGTGGCTaGCCCACTCCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSCSCG*PTPQGW
Trigger: CCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTGCTGGGACACCTTTaGAGACAAAGCCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLLGHL*RQSLSL
Trigger: GAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGGGTCCGATACTCCTaGTCCTGCACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARWVRYS*SCTTRS
Trigger: GCTCCTGGTGGTGCAGGAGCAGGAGTATCGGACCCA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCTGCGTTGAGGATGTaGTTGACATTGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDAALRM*LTLPAV
Trigger: CACCGCTGGCAATGTCAAGCACATCCTCAACGCAGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTCCAGCATCCTGGCTaGGTTGAGGATGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLQHPG*VEDVLD
Trigger: GTCAAGCACATCCTCAACGCAGCCAGGATGCTGGAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCACTGTCCATGGGCTaGTCAGGCAGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPLSMG*SGSWAK
Trigger: CTTTGCCCAGCTGCCTGAGCAGCCCATGGACAGTGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACCACTGTCCATGGGCTaGTCAGGCAGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARPLSMG*SGSWAK
Trigger: CTTTGCCCAGCTGCCTGAGCAGCCCATGGACAGTGG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCTTGGGCTTCAGCTTaGGCTCTTCTACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPWASA*ALLPGA
Trigger: GGCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCACGAACTTGGCGTTaGAGTGGATGCACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDARTWR*SGCTGR
Trigger: CCTACCTGTGCATCCACTGCAACGCCAAGTTCGTGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGAGCCCCAAGACACTaGACAGCCTTGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRAPRH*TALEGA
Trigger: TGCCCCCTCCAAGGCTGTGCAGTGTCTTGGGGCTCT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGTGGATTCTGCTCATaGCTCAGGCCCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRGFCS*LRPWVD
Trigger: GTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCAATGGGCGTGGATTCTaGTCATGCCTCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSNGRGF*SCLRPW
Trigger: CCAGGGCCTGAGGCATGAGCAGAATCCACGCCCATT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGACAGAGGAGGAAATTTaGAGTCCAGGAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRTEEEI*SPGRGG
Trigger: CCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCAGGACTGCCAGCCTaGAAGGAGTCAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPGLPA*KESGKS
Trigger: GGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLAEIR*RSPGSP
Trigger: GGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCGGGGATGTTGGCCTTaGGGTACAGGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRGCWP*GTGSPL
Trigger: TAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCCTGTCGGGGATGTTaGCCTTGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSCRGC*PWGTGS
Trigger: AGAACCTGTACCCCAAGGCCAACATCCCCGACAGGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARPWPEV*KEVRGE
Trigger: TTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGGCTCCTGGCCTTTTaGGAAAAGATGCCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGLLAF*EKMPVS
Trigger: TGAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCGCAGAGCTACCTGTaGGCTTTGCTGAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSQSYL*ALLKLG
Trigger: TCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCAGGTGTTAAGAGGTaGCCCCCATCTCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPGVKR*PPSLRC
Trigger: ACATCGAAGAGATGGGGGCCACCTCTTAACACCTGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCAGGTGTTAAGAGGTaGCCCCCATCTCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPGVKR*PPSLRC
Trigger: ACATCGAAGAGATGGGGGCCACCTCTTAACACCTGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGAGTGGCATCCGGTaGTGTGAAGAATCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWSGIR*CEESGG
Trigger: ACCCCCTGATTCTTCACACCACCGGATGCCACTCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCGGGAGGTTGTCATTaGTTCGTGCTGGGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAGGCH*FVLGEL
Trigger: TAACTCGCCCAGCACGAATCAATGACAACCTCCCGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGTCGTTCTCCGCCTTaGTGGGTCCCAGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSRSPP*WVPEAP
Trigger: GGGGGCCTCTGGGACCCATCAAGGCGGAGAACGACT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGCACTCAGGAAGTTaGGATAGGCACCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWHSGS*DRHRSR
Trigger: ACGACTACGGTGCCTATCTCAACTTCCTGAGTGCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGCAGCTCTGGCGCTTaGTGTGGCGGTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGSSGA*CGGAGG
Trigger: ACCACCTGCACCGCCACATCAAGCGCCAGAGCTGCC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTCCACCTCCCTGCACTaGGCCCTTTTGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSTSLH*ALLSKM
Trigger: CATTTTTGACAAAAGGGCTCAGTGCAGGGAGGTGGA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCAGGCAGATGACTTCTaGGAACAGAGGGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRQADDF*EQRVCV
Trigger: TACACACACCCTCTGTTCTCAGAAGTCATCTGCCTG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCAGGCAGATGACTTCTaGGAACAGAGGGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKQADDF*EQRVCV
Trigger: TACACACACCCTCTGTTCTCAGAAGTCATCTGCCTG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGCTGCCCAGGCAGATaGCTTCTGAGAACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGCPGR*LLRTEG
Trigger: ACCCTCTGTTCTCAGAAGTCATCTGCCTGGGCAGCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGCCAGAAAATTAGCTaGGAGTTTTTCTCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGQKIS*EFFSAG
Trigger: TCCCGCCGAGAAAAACTCTCAGCTAATTTTCTGGCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGATACTCCTGCTCCTaGACCACCAGGAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRYSCS*TTRSTS
Trigger: TGACGTGCTCCTGGTGGTGCAGGAGCAGGAGTATCG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGCACACGTTCACGATaGACTGGATCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGTRSR*TGSPAS
Trigger: GGATGCTGGAGATCCAGTGCATCGTGAACGTGTGCC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTCTCAGCCTCCAGCTaGGCGCGCCCGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLSASS*ARPNSF
Trigger: GAAGCTGTTCGGGCGCGCGCAGCTGGAGGCTGAGAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTCCTCCTCTCTGGGCTaGTCAGAAACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSSSLG*SETKAN
Trigger: GTTTGCTTTGGTTTCTGAGCAGCCCAGAGAGGAGGA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGCTCATCAATGTCATTaGCCATGTTCTCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLAHQCH*PCSQPE
Trigger: CTCTGGCTGAGAACATGGCCAATGACATTGATGAGC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATACGTTCACGATGCACTaGATCTCCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDTFTMH*ISSILA
Trigger: AGCCAGGATGCTGGAGATCCAGTGCATCGTGAACGT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCAGGCAAGTTTTCTTaGTCAGCAAAGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSGKFS*SAKSSV
Trigger: CACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATTGGAAGGGCTTTGGTaGCAGCTGATGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARLEGLW*QLMSWG
Trigger: CCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLAEIR*RSPGSP
Trigger: GGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCCTGTCGGGGATGTTaGCCTTGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSCRGC*PWGTGS
Trigger: AGAACCTGTACCCCAAGGCCAACATCCCCGACAGGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAGCGGACCTCGCAGATaGTGCACATGTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSGPRR*CTCMAS
Trigger: AGAAGCCATACATGTGCACCATCTGCGAGGTCCGCT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGACCAGCCTAGTTGTTaGCTTCGGACATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSDQPSC*LRTWRP
Trigger: TGGCCTCCATGTCCGAAGCCAACAACTAGGCTGGTC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGGCACGTTGGCTGGTaGACATGGGCATGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGHVGW*TWACFR
Trigger: TCTGAAGCATGCCCATGTCCACCAGCCAACGTGCCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTTTCTCGGCGGGATGTaGCGTGCGACCGAAGTTATG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSFLGGM*RATEVM
Trigger: CATAACTTCGGTCGCACGCCACATCCCGCCGAGAAA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGGAAGGGAATGCCAATaGGCTCATCAATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKGRECQ*AHQCHW
Trigger: CCAATGACATTGATGAGCTCATTGGCATTCCCTTCC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGAAGGGAATGCCAATaGGCTCATCAATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGRECQ*AHQCHW
Trigger: CCAATGACATTGATGAGCTCATTGGCATTCCCTTCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAATAGGCCTTCTCTGTaGGATGGTCTGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKNRPSL*DGLSWK
Trigger: CTTCCAAGACAGACCATCTCACAGAGAAGGCCTATT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGGTGGTCAGAGCGCGTaGAGCTCTTGTAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARGGQSA*SSCSRT
Trigger: AGTTCTGCTACAAGAGCTTCACGCGCTCTGACCACC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGTGCAAGTTTCTATATaGGAGCCAGAGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRVQVSI*EPERQG
Trigger: TCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCAC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGTCAGGAATCAGGATaGGGGGAGACTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARCQESG*GETVAR
Trigger: CCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCAATGCCAAGGCCCTaGGGAACCCTCAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAMPRP*GTLNSK
Trigger: TTTTGAGTTGAGGGTTCCTCAGGGCCTTGGCATTGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCCACCTCCCTGCACTaGGCCCTTTTGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSTSLH*ALLSKM
Trigger: CATTTTTGACAAAAGGGCTCAGTGCAGGGAGGTGGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGCATCCGGTGGTGTaGAGAATCAGGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWHPVV*RIRGSL
Trigger: AAGAGACCCCCTGATTCTTCACACCACCGGATGCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCAGGCAGATGACTTCTaGGAACAGAGGGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDQADDF*EQRVCV
Trigger: TACACACACCCTCTGTTCTCAGAAGTCATCTGCCTG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGCCAGAAAATTAGCTaGGAGTTTTTCTCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGQKIS*EFFSAG
Trigger: TCCCGCCGAGAAAAACTCTCAGCTAATTTTCTGGCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGCACACGTTCACGATaGACTGGATCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGTRSR*TGSPAS
Trigger: GGATGCTGGAGATCCAGTGCATCGTGAACGTGTGCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCTTTTGGGAAAAGATaGCCGTCTCAGACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPFGKR*PSQTSK
Trigger: TTTGCTGGTCTGAGACGGGCATCTTTTCCCAAAAGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCTTTTCAGGACCTGCTaGAAATTCAAGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLFRTC*KFKNQE
Trigger: CTCCTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCCTCCTCTCTGGGCTaGTCAGAAACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSSSLG*SETKAN
Trigger: GTTTGCTTTGGTTTCTGAGCAGCCCAGAGAGGAGGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGAGCAAGAATCGCCCTaGGGAGCTGCCCATACTCTA +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRAREQESP*GAAHTL
Trigger: TAGAGTATGGGCAGCTCCGCAGGGCGATTCTTGCTC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGCTCATCAATGTCATTaGCCATGTTCTCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRAHQCH*PCSQPE
Trigger: CTCTGGCTGAGAACATGGCCAATGACATTGATGAGC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCACGTTCACGATGCACTaGATCTCCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSTFTMH*ISSILA
Trigger: AGCCAGGATGCTGGAGATCCAGTGCATCGTGAACGT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGTCTTGGAAGGGCTTTaGTGGCAGCTGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARVLEGL*WQLMSW
Trigger: CCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGAC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGTCAGGGAAGTCCCTaGGGGTGTCTGAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSQGSP*GCLNRP
Trigger: AGGCCTATTCAGACACCCCCAGGGACTTCCCTGACT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACGGGGATGTTGGCCTTaGGGTACAGGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARRGCWP*GTGSPL
Trigger: TAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTCCTGTCGGGGATGTTaGCCTTGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSCRGC*PWGTGS
Trigger: AGAACCTGTACCCCAAGGCCAACATCCCCGACAGGA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAGTTGTGCACGAACTTaGCGTTGCAGTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSCART*RCSGCT
Trigger: TGTGCATCCACTGCAACGCCAAGTTCGTGCACAACT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGACCAGCCTAGTTGTTaGCTTCGGACATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLDQPSC*LRTWRP
Trigger: TGGCCTCCATGTCCGAAGCCAACAACTAGGCTGGTC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGTTTCCCCATGGACTTaGGGAGTACAAAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRVSPWT*GVQSFY
Trigger: GTAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAAC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCAGGGGGTCTCTTCTaGAGAGTTGTGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSGGLF*RVVRGT
Trigger: TGTCCCTCTCACAACTCTCCAGAAGAGACCCCCTGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGTTGGCTGGTGGACATaGGCATGCTTCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDVGWWT*ACFREK
Trigger: CTTTTCTCTGAAGCATGCCCATGTCCACCAGCCAAC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTGTCAGAGTCTCGTaGCGGGGCTGCGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAVRVS*RGCAGG
Trigger: CCCGCCGGCGCAGCCCCGCCACGAGACTCTGACAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGAAGGGAATGCCAATaGGCTCATCAATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGRECQ*AHQCHW
Trigger: CCAATGACATTGATGAGCTCATTGGCATTCCCTTCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGGCACTCAGGAAGTTaGGATAGGCACCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARWHSGS*DRHRSR
Trigger: ACGACTACGGTGCCTATCTCAACTTCCTGAGTGCCA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGACCTGTGGGCTTTGCTaGAGCTCGGAAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPTCGLC*SSEAPL
Trigger: CAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCAATGCCAAGGCCCTaGGGAACCCTCAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLAMPRP*GTLNSK
Trigger: TTTTGAGTTGAGGGTTCCTCAGGGCCTTGGCATTGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCAGGCAGATGACTTCTaGGAACAGAGGGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSQADDF*EQRVCV
Trigger: TACACACACCCTCTGTTCTCAGAAGTCATCTGCCTG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGACGAAGACAGGAATCTaGGAGGCGGCTGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPTKTGI*EAAAQA
Trigger: TGCCTGGGCAGCCGCCTCTCAGATTCCTGTCTTCGT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGGCCAGAAAATTAGCTaGGAGTTTTTCTCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSGQKIS*EFFSAG
Trigger: TCCCGCCGAGAAAAACTCTCAGCTAATTTTCTGGCC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTTGTTGCTGTCCTGTaGACTTTCAGAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLVAVL*TFRSHI
Trigger: GATGTGACTTCTGAAAGTTCACAGGACAGCAACAAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGTCCTTCAGAGACAATaGGTGTCCAGTGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDVLQRQ*VSSDEQ
Trigger: TTGCTCATCACTGGACACTCATTGTCTCTGAAGGAC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCCTTTTGGGAAAAGATaGCCGTCTCAGACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDPFGKR*PSQTSK
Trigger: TTTGCTGGTCTGAGACGGGCATCTTTTCCCAAAAGG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGC +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSCGMGR*KFLYES
Trigger: GCTCTCATATAGAAACTTGCACCGGCCCATGCCACA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARMRGDC*QVLRGG
Trigger: GCCACCTCTTAACACCTGGCAACAGTCTCCCCTCAT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLMRGDC*QVLRGG
Trigger: GCCACCTCTTAACACCTGGCAACAGTCTCCCCTCAT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTTTTCAGGACCTGCTaGAAATTCAAGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLFRTC*KFKNQE
Trigger: CTCCTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTTAAGACTGGCTTGTTaGTGTCCTGTGAACTTTCAG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLRLAC*CPVNFQ
Trigger: CTGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTCTCAGCCAGAGCCCTaGTGGGTGACCTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSQPEP*WVTLGK
Trigger: CTTGCCCAAGGTCACCCAGCAGGGCTCTGGCTGAGA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588982.5
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAGTCCTTGTTGTAACTaGTGGGACACCTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSPCCN*WDTFED
Trigger: GTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGCAGCTGATGTCCTaGGGGTCAGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWQLMS*GSGKFS
Trigger: AGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATGGCAGCTGATGTCCTaGGGGTCAGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARWQLMS*GSGKFS
Trigger: AGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCCCGAAGAGCAGGCTaGCGGCCCTCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLARRAG*RPSTQQ
Trigger: CTGCTGCGTGGAGGGCCGCCAGCCTGCTCTTCGGGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACTTTGCCATAGGGGGTaGGGCTTAACCAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARLCHRG*GLTKVH
Trigger: ATGCACCTTGGTTAAGCCCCACCCCCTATGGCAAAG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCCTCAGAGGAGTGTTaGCAGAGACTTTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPSEEC*QRLCHR
Trigger: CCTATGGCAAAGTCTCTGCCAACACTCCTCTGAGGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGGCCTTCCAGAGCCTaGTTCCTGACTGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGPSRA*FLTGSR
Trigger: CCTGGAACCAGTCAGGAACCAGGCTCTGGAAGGCCC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACCAGGTGTTAAGAGGTaGCCCCCATCTCTTCGATGT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARPGVKR*PPSLRC
Trigger: ACATCGAAGAGATGGGGGCCACCTCTTAACACCTGG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCCTTTTGTCAAAAATaGGGAGCCAAATACTCCCAC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPFCQK*GAKYSH
Trigger: GTGGGAGTATTTGGCTCCCCATTTTTGACAAAAGGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCCTTTTGTCAAAAATaGGGAGCCAAATACTCCCAC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPFCQK*GAKYSH
Trigger: GTGGGAGTATTTGGCTCCCCATTTTTGACAAAAGGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAACCCTCCTCCTCTCTaGGCTGCTCAGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLNPPPL*AAQKPK
Trigger: CTTTGGTTTCTGAGCAGCCCAGAGAGGAGGAGGGTT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAACCCTCCTCCTCTCTaGGCTGCTCAGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARNPPPL*AAQKPK
Trigger: CTTTGGTTTCTGAGCAGCCCAGAGAGGAGGAGGGTT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGTCTGTGCTCTTCTCTaGCCTTTTTGTTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLVCALL*PFCLLC
Trigger: ACACAACAAACAAAAAGGCCAGAGAAGAGCACAGAC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGTTGGCTGGTGGACATaGGCATGCTTCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSVGWWT*ACFREK
Trigger: CTTTTCTCTGAAGCATGCCCATGTCCACCAGCCAAC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
3UTR CAA 72 bp TTGTCTGTTGTCAGGAATCAGGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGGCCCCCATCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LSVVRNQDEGRL*PGVKRWPPSLR
Trigger: TCGAAGAGATGGGGGCCACCTCTTAACACCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACAACAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCAATAGGCCTTCTCTGTaGGATGGTCTGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSNRPSL*DGLSWK
Trigger: CTTCCAAGACAGACCATCTCACAGAGAAGGCCTATT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGTCCCTGGGGGTGTCTaGATAGGCCTTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPVPGGV*IGLLCE
Trigger: CTCACAGAGAAGGCCTATTCAGACACCCCCAGGGAC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLRCWP*EPQDTA
Trigger: TGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTCAGAGAAAAGTGTCTaGAACGAAGACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSEKSV*NEDRNL
Trigger: CAGATTCCTGTCTTCGTTTCAGACACTTTTCTCTGA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGGCCATCGTGCCGTTaGTCATTGAGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPRPSCR*SLRLHR
Trigger: CCTGTGCAGCCTCAATGAGCAACGGCACGATGGCCT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGTGGCATGGGCCGGTaGAAGTTTCTATATGAGAGC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLCGMGR*KFLYES
Trigger: GCTCTCATATAGAAACTTGCACCGGCCCATGCCACA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTTCCTTTTCAGGACCTaGTGCAAATTCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRFLFRT*CKFKNQ
Trigger: CTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAGGAA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATCCTCCTCTCTGGGCTaGTCAGAAACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARSSSLG*SETKAN
Trigger: GTTTGCTTTGGTTTCTGAGCAGCCCAGAGAGGAGGA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGTTTGTTGTGTTTTTaGTCAGGAAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLCLLCF*SGKSQG
Trigger: GCCTTGGCTTTTTCCTGAGCAAAAACACAACAAACA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGGTGGACATGGGCATaGTTCAGAGAAAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSWWTWA*FREKCL
Trigger: CAGACACTTTTCTCTGAAGCATGCCCATGTCCACCA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCAAGTGACTTCTCTATaGCTCAGTTGTTGCATCAAC +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKQVTSL*LSCCIN
Trigger: GTTGATGCAACAACTGAGGCATAGAGAAGTCACTTG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588982.5
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTTGGAAGGGCTTTGGTaGCAGCTGATGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLEGLW*QLMSWG
Trigger: CCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLAEIR*RSPGSP
Trigger: GGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGAAGTCCGGGGCGAATaGAGACAAGGAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPEVRGE*RQGGSP
Trigger: AGGAGACCCTCCTTGTCTCCATTCGCCCCGGACTTC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGATGACCAGATCCAGTaGCCCACTGTCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPDDQIQ*PTVHGL
Trigger: CAGCCCATGGACAGTGGGCCACTGGATCTGGTCATC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGGTCTGTGCTCTTCTCTaGCCTTTTTGTTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKVCALL*PFCLLC
Trigger: ACACAACAAACAAAAAGGCCAGAGAAGAGCACAGAC...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGAAGGGAATGCCAATaGGCTCATCAATGTCATTGG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGRECQ*AHQCHW
Trigger: CCAATGACATTGATGAGCTCATTGGCATTCCCTTCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAGTCGTTCTCCGCCTTaGTGGGTCCCAGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLSRSPP*WVPEAP
Trigger: GGGGGCCTCTGGGACCCATCAAGGCGGAGAACGACT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGTGGTCAGAGCGCGTaGAGCTCTTGTAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGGQSA*SSCSRT
Trigger: AGTTCTGCTACAAGAGCTTCACGCGCTCTGACCACC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTGTCAGGAATCAGGATaGGGGGAGACTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPCQESG*GETVAR
Trigger: CCTGGCAACAGTCTCCCCTCATCCTGATTCCTGACA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTCAGAGAAAAGTGTCTaGAACGAAGACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSEKSV*NEDRNL
Trigger: CAGATTCCTGTCTTCGTTTCAGACACTTTTCTCTGA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCTCTCAGCCTCCAGCTaGGCGCGCCCGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLLSASS*ARPNSF
Trigger: GAAGCTGTTCGGGCGCGCGCAGCTGGAGGCTGAGAG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGTTTGTTGTGTTTTTaGTCAGGAAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GGSHTAKGTITSNAKALRCLLCF*SGKSQG
Trigger: GCCTTGGCTTTTTCCTGAGCAAAAACACAACAAACA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGTGGACATGGGCATaGTTCAGAGAAAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWWTWA*FREKCL
Trigger: CAGACACTTTTCTCTGAAGCATGCCCATGTCCACCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGGATCTCCCCAGCAGTaGAGCCCCAAACGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLGSPQQ*SPKRPG
Trigger: GCCTGGGCGTTTGGGGCTGCACTGCTGGGGAGATCC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCCAGGACGGAGCGGTaGGTCCGATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLARTER*VRYSCS
Trigger: GGAGCAGGAGTATCGGACCCACCGCTCCGTCCTGGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGTCTTGGAAGGGCTTTaGTGGCAGCTGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPVLEGL*WQLMSW
Trigger: CCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGAC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGTTTCCCCATGGACTTaGGGAGTACAAAGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLVSPWT*GVQSFY
Trigger: GTAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAAC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTGGAGTGGCATCCGGTaGTGTGAAGAATCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPWSGIR*CEESGG
Trigger: ACCCCCTGATTCTTCACACCACCGGATGCCACTCCA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAAGCCCCAACACCACTaGATTCCAATTTATTCATGT +
Preference number: 4 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKKPQHH*IPIYSC
Trigger: ACATGAATAAATTGGAATCCAGTGGTGTTGGGGCTT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTTGTCCTGCCTGGTaGAGCGGACCTCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLACPAW*SGPRRW
Trigger: CCATCTGCGAGGTCCGCTTCACCAGGCAGGACAAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAGGCCAACCACCCCCTaGCCCCTCATGACTCACCCA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRPTTP*PLMTHP
Trigger: TGGGTGAGTCATGAGGGGTCAGGGGGTGGTTGGCCT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCAATGCCAAGGCCCTaGGGAACCCTCAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPAMPRP*GTLNSK
Trigger: TTTTGAGTTGAGGGTTCCTCAGGGCCTTGGCATTGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGAAGATTGTCCCTTaGATCACTAAGGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWKIVP*ITKANF
Trigger: AAAGTTTGCCTTAGTGATTCAAGGGACAATCTTCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTTGTTGCTGTCCTGTaGACTTTCAGAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLVAVL*TFRSHI
Trigger: GATGTGACTTCTGAAAGTTCACAGGACAGCAACAAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTGGCGTTGCAGTGGATaGACAGGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLWRCSG*TGRAAP
Trigger: GGGAGCGGCCCTACCTGTGCATCCACTGCAACGCCA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCGCTTGATGTGGCGGTaGAGGTGGTCAGAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRLMWR*RWSERV
Trigger: CACGCGCTCTGACCACCTGCACCGCCACATCAAGCG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGGCGCCCTTGGGCGCTaGCAGGAAGTGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYGALGR*QEVLGG
Trigger: CCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPMRGDC*QVLRGG
Trigger: GCCACCTCTTAACACCTGGCAACAGTCTCCCCTCAT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACTTTTCAGGACCTGCTaGAAATTCAAGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARLFRTC*KFKNQE
Trigger: CTCCTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTTTTCAGGACCTGCTaGAAATTCAAGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLFRTC*KFKNQE
Trigger: CTCCTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTTCCTTTTCAGGACCTaGTGCAAATTCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSFLFRT*CKFKNQ
Trigger: CTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAGGAA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGTTTGTTGTGTTTTTaGTCAGGAAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDCLLCF*SGKSQG
Trigger: GCCTTGGCTTTTTCCTGAGCAAAAACACAACAAACA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCCCCACAACCCATTTaGTTCAAGTTCTTGATCATA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPPQPI*FKFLII
Trigger: TATGATCAAGAACTTGAAGCAAATGGGTTGTGGGGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGACAGAGGAGGAAATTTaGAGTCCAGGAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPTEEEI*SPGRGG
Trigger: CCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR GCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAGTCCTTGTTGTAACTaGTGGGACACCTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARSPCCN*WDTFED
Trigger: GTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGACGTTCACGATGCACTaGATCTCCAGCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPTFTMH*ISSILA
Trigger: AGCCAGGATGCTGGAGATCCAGTGCATCGTGAACGT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTGGCAGCTGATGTCCTaGGGGTCAGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPWQLMS*GSGKFS
Trigger: AGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGCGGACCTCGCAGATaGTGCACATGTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSGPRR*CTCMAS
Trigger: AGAAGCCATACATGTGCACCATCTGCGAGGTCCGCT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCCCGAAGAGCAGGCTaGCGGCCCTCCACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYARRAG*RPSTQQ
Trigger: CTGCTGCGTGGAGGGCCGCCAGCCTGCTCTTCGGGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTGCCAGGAAGTGCTTaGCGGGGCTGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLPGSA*RGWGPG
Trigger: TCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGGAGGGCTGGTGGGCTaGAGCCGACAGGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYGGLVG*SRQGPA
Trigger: GGCTGGTCCCTGTCGGCTCCAGCCCACCAGCCCTCC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACCTGCTGTGGCTGGCTaGGCACCAGGCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESPAVAG*APGQPP
Trigger: GGGTGGTTGGCCTGGTGCCCAGCCAGCCACAGCAGG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAACCCTCCTCCTCTCTaGGCTGCTCAGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPNPPPL*AAQKPK
Trigger: CTTTGGTTTCTGAGCAGCCCAGAGAGGAGGAGGGTT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTCCGGGACGCAGTCCTaGCGTCCTCCTTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYSGTQS*RPPSPP
Trigger: CGGCGGCGAAGGAGGACGCCAGGACTGCGTCCCGGA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590800.6
3UTR CAA 72 bp CGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATaGTCCCTTGAATCACTAAGGCAAACTTTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RRDVACDRSYGR*SLESLRQTLLS
Trigger: ACTCAACAAAGTTTGCCTTAGTGATTCAAGGGACAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCGTGCCGTTGCTCATTaGGGCTGCACAGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRAVAH*GCTGPH
Trigger: GTGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAGTCGTTCTCCGCCTTaGTGGGTCCCAGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSRSPP*WVPEAP
Trigger: GGGGGCCTCTGGGACCCATCAAGGCGGAGAACGACT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGGCAGCTCTGGCGCTTaGTGTGGCGGTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESGSSGA*CGGAGG
Trigger: ACCACCTGCACCGCCACATCAAGCGCCAGAGCTGCC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTCAGAGAAAAGTGTCTaGAACGAAGACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSEKSV*NEDRNL
Trigger: CAGATTCCTGTCTTCGTTTCAGACACTTTTCTCTGA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGGAAGATTGTCCCTTaGATCACTAAGGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSWKIVP*ITKANF
Trigger: AAAGTTTGCCTTAGTGATTCAAGGGACAATCTTCCA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCAGAGCCAAGCACCGATaGCTTAGTTTTAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSRAKHR*LSFKFQ
Trigger: CTGAAATTTAAAACTAAGGCATCGGTGCTTGGCTCT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCCAGGACGGAGCGGTaGGTCCGATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESARTER*VRYSCS
Trigger: GGAGCAGGAGTATCGGACCCACCGCTCCGTCCTGGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGTGGCCCACTGTCCATaGGCTGCTCAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESVAHCP*AAQAAG
Trigger: CCCAGCTGCCTGAGCAGCCCATGGACAGTGGGCCAC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGTTGTGCACGAACTTaGCGTTGCAGTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSCART*RCSGCT
Trigger: TGTGCATCCACTGCAACGCCAAGTTCGTGCACAACT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAAAAGTTCAGATCCATaGGGTAGGGTAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPKSSDP*GRVEWA
Trigger: GGCCCACTCTACCCTACCCCATGGATCTGAACTTTT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGTGCAAGTTTCTATATaGGAGCCAGAGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPVQVSI*EPERQG
Trigger: TCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCAC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGGCTGCCCAGGCAGATaGCTTCTGAGAACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLGCPGR*LLRTEG
Trigger: ACCCTCTGTTCTCAGAAGTCATCTGCCTGGGCAGCC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGTGGAAGATTGTCCCTTaGATCACTAAGGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: AESFSRRDVACDRSYGRLWKIVP*ITKANF
Trigger: AAAGTTTGCCTTAGTGATTCAAGGGACAATCTTCCA...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGTCCTTCAGAGACAATaGGTGTCCAGTGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPVLQRQ*VSSDEQ
Trigger: TTGCTCATCACTGGACACTCATTGTCTCTGAAGGAC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAGGCCATCGTGCCGTTaGTCATTGAGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRPSCR*SLRLHR
Trigger: CCTGTGCAGCCTCAATGAGCAACGGCACGATGGCCT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACGCTTGATGTGGCGGTaGAGGTGGTCAGAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRLMWR*RWSERV
Trigger: CACGCGCTCTGACCACCTGCACCGCCACATCAAGCG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCTTAACCAAGGTGCATaGCCAGCCCCTACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLLNQGA*PAPTSS
Trigger: GGAGGAGGTAGGGGCTGGGCATGCACCTTGGTTAAG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTGGTGGACATGGGCATaGTTCAGAGAAAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPWWTWA*FREKCL
Trigger: CAGACACTTTTCTCTGAAGCATGCCCATGTCCACCA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTCAGGCAAGTTTTCTTaGTCAGCAAAGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSGKFS*SAKSSV
Trigger: CACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGATGACCAGATCCAGTaGCCCACTGTCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLDDQIQ*PTVHGL
Trigger: CAGCCCATGGACAGTGGGCCACTGGATCTGGTCATC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGACATGGAGGCCACGTaGTTGAGGCCGGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYDMEAT*LRPASP
Trigger: TGGGCTCGCCGGCCTCAACCACGTGGCCTCCATGTC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTCCTAAGTGCCCCTaGGCACCCAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAPKCP*APSSLW
Trigger: CCACAAAGAACTGGGTGCCCAGGGGCACTTAGGAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAAGCCCCAACACCACTaGATTCCAATTTATTCATGT +
Preference number: 4 (lower is better)
Translates to: GTQFFVAWAGASFYMRARKPQHH*IPIYSC
Trigger: ACATGAATAAATTGGAATCCAGTGGTGTTGGGGCTT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTTGTTGCTGTCCTGTaGACTTTCAGAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLVAVL*TFRSHI
Trigger: GATGTGACTTCTGAAAGTTCACAGGACAGCAACAAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTGCGTTGAGGATGTaGTTGACATTGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAALRM*LTLPAV
Trigger: CACCGCTGGCAATGTCAAGCACATCCTCAACGCAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCGCTTGATGTGGCGGTaGAGGTGGTCAGAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYRLMWR*RWSERV
Trigger: CACGCGCTCTGACCACCTGCACCGCCACATCAAGCG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCGGGGATGTTGGCCTTaGGGTACAGGTTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRGCWP*GTGSPL
Trigger: TAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESPWPEV*KEVRGE
Trigger: TTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGACTGCTGAGAGGCCTTaGGCTTCAGCTTGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLTAERP*ASACAL
Trigger: AAGAGCGCAAGCTGAAGCCCAAGGCCTCTCAGCAGT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGACCAGCCTAGTTGTTaGCTTCGGACATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLDQPSC*LRTWRP
Trigger: TGGCCTCCATGTCCGAAGCCAACAACTAGGCTGGTC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGGGCTCCTGGCCTTTTaGGAAAAGATGCCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLGLLAF*EKMPVS
Trigger: TGAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTGGAGTGGCATCCGGTaGTGTGAAGAATCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLWSGIR*CEESGG
Trigger: ACCCCCTGATTCTTCACACCACCGGATGCCACTCCA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCGGGGGCACGTTGGCTaGTGGACATGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYRGHVG*WTWACF
Trigger: GAAGCATGCCCATGTCCACCAGCCAACGTGCCCCCG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTTTCTCGGCGGGATGTaGCGTGCGACCGAAGTTATG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLFLGGM*RATEVM
Trigger: CATAACTTCGGTCGCACGCCACATCCCGCCGAGAAA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGTCCCTGGGGGTGTCTaGATAGGCCTTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESVPGGV*IGLLCE
Trigger: CTCACAGAGAAGGCCTATTCAGACACCCCCAGGGAC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCTCCCCTGATGACCTaGTCTCTGTCTAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAPLMT*SLSSLA
Trigger: GGCCAGACTAGACAGAGATCAGGTCATCAGGGGAGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACTTCGATGTTGGCCCTaGGAGCCCCAAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLRCWP*EPQDTA
Trigger: TGCAGTGTCTTGGGGCTCTCAGGGCCAACATCGAAG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCTGCTGGGACACCTTTaGAGACAAAGCCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLLLGHL*RQSLSL
Trigger: GAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTGGGTCCGATACTCCTaGTCCTGCACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYWVRYS*SCTTRS
Trigger: GCTCCTGGTGGTGCAGGAGCAGGAGTATCGGACCCA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCACTGTCCATGGGCTaGTCAGGCAGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPLSMG*SGSWAK
Trigger: CTTTGCCCAGCTGCCTGAGCAGCCCATGGACAGTGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCACCCAGCTCCTAAGTaGCCCTGGGCACCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYHPAPK*PWAPSS
Trigger: AGAACTGGGTGCCCAGGGGCACTTAGGAGCTGGGTG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATAGAGCCCCAAGACACTaGACAGCCTTGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYRAPRH*TALEGA
Trigger: TGCCCCCTCCAAGGCTGTGCAGTGTCTTGGGGCTCT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTTCCTTTTCAGGACCTaGTGCAAATTCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPFLFRT*CKFKNQ
Trigger: CTGGTTCTTGAATTTGCAGCAGGTCCTGAAAAGGAA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACGGCGGGATGTGGCGTaGGACCGAAGTTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRRDVA*DRSYGR
Trigger: TCTTCCATAACTTCGGTCGCACGCCACATCCCGCCG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTTAAGACTGGCTTGTTaGTGTCCTGTGAACTTTCAG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLRLAC*CPVNFQ
Trigger: CTGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAATCGCCCTGCGGAGCTaGCCATACTCTATGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESIALRS*PYSMAQ
Trigger: TTGGGCCATAGAGTATGGGCAGCTCCGCAGGGCGAT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGGCCGGGAGCCCCTTTaGTCCACCTGTACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESGREPL*STCTVK
Trigger: CTTAACAGTACAGGTGGACCAAAGGGGCTCCCGGCC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATTGGAAGGGCTTTGGTaGCAGCTGATGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLEGLW*QLMSWG
Trigger: CCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCAGGACTGCCAGCCTaGAAGGAGTCAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPGLPA*KESGKS
Trigger: GGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGATGACCAGATCCAGTaGCCCACTGTCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESDDQIQ*PTVHGL
Trigger: CAGCCCATGGACAGTGGGCCACTGGATCTGGTCATC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGATCTCTGTCTAGTCTaGCCATATTTCTCACCTATG +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPDLCLV*PYFSPM
Trigger: CATAGGTGAGAAATATGGCCAGACTAGACAGAGATC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGGGCACGTTGGCTGGTaGACATGGGCATGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESGHVGW*TWACFR
Trigger: TCTGAAGCATGCCCATGTCCACCAGCCAACGTGCCC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTGCCCATACTCTATaGCCCAAGTCCTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAAHTL*PKSSSV
Trigger: TACAGAGGAGGACTTGGGCCATAGAGTATGGGCAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTCCACCTCCCTGCACTaGGCCCTTTTGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLSTSLH*ALLSKM
Trigger: CATTTTTGACAAAAGGGCTCAGTGCAGGGAGGTGGA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGGCCAGAAAATTAGCTaGGAGTTTTTCTCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLGQKIS*EFFSAG
Trigger: TCCCGCCGAGAAAAACTCTCAGCTAATTTTCTGGCC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATAGGCCATCGTGCCGTTaGTCATTGAGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYRPSCR*SLRLHR
Trigger: CCTGTGCAGCCTCAATGAGCAACGGCACGATGGCCT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCTGCGTTGAGGATGTaGTTGACATTGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAALRM*LTLPAV
Trigger: CACCGCTGGCAATGTCAAGCACATCCTCAACGCAGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTCCTCCTCTCTGGGCTaGTCAGAAACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLSSSLG*SETKAN
Trigger: GTTTGCTTTGGTTTCTGAGCAGCCCAGAGAGGAGGA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGAAGTCCGGGGCGAATaGAGACAAGGAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYEVRGE*RQGGSP
Trigger: AGGAGACCCTCCTTGTCTCCATTCGCCCCGGACTTC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAACTGCTGAGAGGCCTTaGGCTTCAGCTTGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESTAERP*ASACAL
Trigger: AAGAGCGCAAGCTGAAGCCCAAGGCCTCTCAGCAGT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAGTTGTGCACGAACTTaGCGTTGCAGTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLSCART*RCSGCT
Trigger: TGTGCATCCACTGCAACGCCAAGTTCGTGCACAACT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATGGAGTGGCATCCGGTaGTGTGAAGAATCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESWSGIR*CEESGG
Trigger: ACCCCCTGATTCTTCACACCACCGGATGCCACTCCA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAAGCCCCAACACCACTaGATTCCAATTTATTCATGT +
Preference number: 4 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPKPQHH*IPIYSC
Trigger: ACATGAATAAATTGGAATCCAGTGGTGTTGGGGCTT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACACTTCTTGCTCTTGTaGCTGACCCACTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESHFLLL*LTHSSG
Trigger: CCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACTGGAGACTGGAAAATaGGCCCTCAGAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLETGK*ALRGVL
Trigger: CAACACTCCTCTGAGGGCTCATTTTCCAGTCTCCAG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCAAAAGGAGGCAGCTaGTTTAGGAGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAKGGS*FRSPGK
Trigger: TTTTCCCGGGCTCCTAAAGCAGCTGCCTCCTTTTGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTGGTGGACATGGGCATaGTTCAGAGAAAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLWWTWA*FREKCL
Trigger: CAGACACTTTTCTCTGAAGCATGCCCATGTCCACCA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCAACCAGAAGTATTTaGCCGGGAGCCCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPTRSI*PGAPLV
Trigger: GACCAAAGGGGCTCCCGGCCAAATACTTCTGGTTGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCTCATCAATGTCATTaGCCATGTTCTCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLAHQCH*PCSQPE
Trigger: CTCTGGCTGAGAACATGGCCAATGACATTGATGAGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATGGCAGCTGATGTCCTaGGGGTCAGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESWQLMS*GSGKFS
Trigger: AGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATAGTCAGGGAAGTCCCTaGGGGTGTCTGAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYSQGSP*GCLNRP
Trigger: AGGCCTATTCAGACACCCCCAGGGACTTCCCTGACT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATACTGCTGAGAGGCCTTaGGCTTCAGCTTGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYTAERP*ASACAL
Trigger: AAGAGCGCAAGCTGAAGCCCAAGGCCTCTCAGCAGT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAGCGGACCTCGCAGATaGTGCACATGTATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSGPRR*CTCMAS
Trigger: AGAAGCCATACATGTGCACCATCTGCGAGGTCCGCT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCACCCAGTTCTTTGTaGCATGGGCCGGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYAPSSL*HGPVQV
Trigger: AACTTGCACCGGCCCATGCCACAAAGAACTGGGTGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTTTCTCGGCGGGATGTaGCGTGCGACCGAAGTTATG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYFLGGM*RATEVM
Trigger: CATAACTTCGGTCGCACGCCACATCCCGCCGAGAAA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATTCAGAGAGCAAACTTaGGCAGAGAGAGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESFREQT*AERGDL
Trigger: CAGGTCCCCTCTCTCTGCCCAAGTTTGCTCTCTGAA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCAGGGGCCAAAGCATTaGTTCTTCTTGGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYQGPKH*FFLDLP
Trigger: GGGGAGATCCAAGAAGAATCAATGCTTTGGCCCCTG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATATGAGGGGAGACTGTTaGCAGGTGTTAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYMRGDC*QVLRGG
Trigger: GCCACCTCTTAACACCTGGCAACAGTCTCCCCTCAT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLAEIR*RSPGSP
Trigger: GGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTTCAGAGAGCAAACTTaGGCAGAGAGAGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYFREQT*AERGDL
Trigger: CAGGTCCCCTCTCTCTGCCCAAGTTTGCTCTCTGAA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGTGCAAGTTTCTATATaGGAGCCAGAGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESVQVSI*EPERQG
Trigger: TCCCTGTCTCTCTGGCTCTCATATAGAAACTTGCAC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGTGACCTTGGGCAAGTaGCTTCTCTATGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYVTLGK*LLYASV
Trigger: AACTGAGGCATAGAGAAGTCACTTGCCCAAGGTCAC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588982.5
CDS-3UTR GCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACCTTTTGGGAAAAGATaGCCGTCTCAGACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESPFGKR*PSQTSK
Trigger: TTTGCTGGTCTGAGACGGGCATCTTTTCCCAAAAGG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCCCCACAACCCATTTaGTTCAAGTTCTTGATCATA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPPQPI*FKFLII
Trigger: TATGATCAAGAACTTGAAGCAAATGGGTTGTGGGGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGTCTGTGCTCTTCTCTaGCCTTTTTGTTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLVCALL*PFCLLC
Trigger: ACACAACAAACAAAAAGGCCAGAGAAGAGCACAGAC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCTTGTTGTAACTGCTaGGACACCTTTGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPCCNC*DTFEDK
Trigger: TTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACTTGTTGCTGTCCTGTaGACTTTCAGAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLVAVL*TFRSHI
Trigger: GATGTGACTTCTGAAAGTTCACAGGACAGCAACAAG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCAGTTCTTTGTGGCATaGGCCGGTGCAAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYQFFVA*AGASFY
Trigger: ATAGAAACTTGCACCGGCCCATGCCACAAAGAACTG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATTTCTATGTGGCAGGTaGGTAGTTCTCAAAAAGACC +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESFLCGR*VVLKKT
Trigger: GGTCTTTTTGAGAACTACCCACCTGCCACATAGAAA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGCATTTCTTTCTATGTaGCAGGTGGGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: KNKQINPRNRCFVCCQESAFLSM*QVGSSQ
Trigger: TTGAGAACTACCCACCTGCCACATAGAAAGAAATGC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATATCTCTGTGATTCTCTaGGGGGATAGGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYISVIL*GDRCVC
Trigger: ACATACACACCTATCCCCCCAGAGAATCACAGAGAT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCCTTTTGTCAAAAATaGGGAGCCAAATACTCCCAC +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPFCQK*GAKYSH
Trigger: GTGGGAGTATTTGGCTCCCCATTTTTGACAAAAGGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTCAGAGAAAAGTGTCTaGAACGAAGACAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYSEKSV*NEDRNL
Trigger: CAGATTCCTGTCTTCGTTTCAGACACTTTTCTCTGA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR GCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCCCCACAACCCATTTaGTTCAAGTTCTTGATCATA +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPPQPI*FKFLII
Trigger: TATGATCAAGAACTTGAAGCAAATGGGTTGTGGGGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGTCTGTGCTCTTCTCTaGCCTTTTTGTTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYVCALL*PFCLLC
Trigger: ACACAACAAACAAAAAGGCCAGAGAAGAGCACAGAC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCTTGTTGTAACTGCTaGGACACCTTTGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPCCNC*DTFEDK
Trigger: TTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR TCA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTGGAAGATTGTCCCTTaGATCACTAAGGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYWKIVP*ITKANF
Trigger: AAAGTTTGCCTTAGTGATTCAAGGGACAATCTTCCA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp CGCTCGTGCCCGGGCCGTGTCCTGAGCGCCGCCAGGGTCCCGGGCTaGGAATCCACGCGGCCGCGCTGCTCGCGGGAGCCTGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: RSCPGRVLSAARVPG*ESTRPRCSREPAAA
Trigger: GGCTGCGGCAGGCTCCCGCGAGCAGCGCGGCCGCGTGGATTCCCAGCCCGGGACCCTGGCGGCGCTCAGGACACGGCCCGGGCACGAGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CCA 90 bp CGCCGGCCCTGCGCGCCTCCCGCACTTGGCTCCGGGACGCAGTCCTaGCGTCCTCCTTCGCCGCCGGTGTCCGCCGGTCCCTGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: RRPCAPPALGSGTQS*RPPSPPVSAGPCAP
Trigger: GGGCGCGCAGGGACCGGCGGACACCGGCGGCGAAGGAGGACGCCAGGACTGCGTCCCGGAGCCAAGTGCGGGAGGCGCGCAGGGCCGGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS GCA 90 bp ATGTTCTCAGCCAGAGCCCTGGCCGCCCCGGGGACGCCGCGCTCGTaGCCGGGCCGTGTCCTGAGCGCCGCCAGGGTCCCGGGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: MFSARALAAPGTPRS*PGRVLSAARVPGWE
Trigger: TTCCCAGCCCGGGACCCTGGCGGCGCTCAGGACACGGCCCGGGCACGAGCGCGGCGTCCCCGGGGCGGCCAGGGCTCTGGCTGAGAACAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CCA 90 bp GCTCTTGCAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAGTGCTTaGCGGGGCTGGGGCCCGGGAGGCACACAGCTGCGCCGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALAGSGRPWALPGSA*RGWGPGGTQLRRPG
Trigger: ACCTGGGCGGCGCAGCTGTGTGCCTCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 90 bp CTGAGCGCCGCCAGGGTCCCGGGCTGGGAATCCACGCGGCCGCGCTaGTCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTTGTCATTGATT +
Preference number: 5 (lower is better)
Translates to: LSAARVPGWESTRPR*SREPAAAGGRLSLI
Trigger: AATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCGCGGCCGCGTGGATTCCCAGCCCGGGACCCTGGCGGCGCTCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS GCA 90 bp GGTCCCGGGCTGGGAATCCACGCGGCCGCGCTGCTCGCGGGAGCCTaGCGCAGCCGGCGGGAGGTTGTCATTGATTCGTGCTGGGCGAGT +
Preference number: 5 (lower is better)
Translates to: GPGLGIHAAALLAGA*RSRREVVIDSCWAS
Trigger: ACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCGCGGCCGCGTGGATTCCCAGCCCGGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS GCA 90 bp TCCAGCTGCGCGCGCCCGAACAGCTTCATCTGTGTCTCCTCGAACTaGCGCTCCAGCTCTTGCAGGCTCAGGGCGCCCTTGGGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSCARPNSFICVSSN*RSSSCRLRAPLGAA
Trigger: GGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGTTCGAGGAGACACAGATGAAGCTGTTCGGGCGCGCGCAGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 90 bp CTTGCTCTTGTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTaGGCTCCCAGCTGCTCAGAGGGGATCTCCGCGCGCCGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LALVADPLLRVGQSF*APSCSEGISARRRP
Trigger: GGGCCGGCGGCGCGCGGAGATCCCCTCTGAGCAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588970.5
ENST00000589194.5
ENST00000590800.6
ENST00000590855.5
CDS CCA 90 bp CGGCGACAGGCACCGGGCCAGGCTCGGCTTCACTTGTCCGAGGCTTaGAGGAACTGTGTGCGTGCGCCCATTTCCCCCAGCTTCCCGACT +
Preference number: 5 (lower is better)
Translates to: RRQAPGQARLHLSEA*RNCVRAPISPSFPT
Trigger: AGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCGGTGCCTGTCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 90 bp CTCATTTCCTTGAGAGAAGACGCACGCAGTTCCCGTGCGTGTCGCTaGGAACAGACCTCGCACTACCCCGCGCGGCGACAGGCACCGGGC +
Preference number: 5 (lower is better)
Translates to: LISLREDARSSRACR*EQTSHYPARRQAPG
Trigger: GCCCGGTGCCTGTCGCCGCGCGGGGTAGTGCGAGGTCTGTTCCCAGCGACACGCACGGGAACTGCGTGCGTCTTCTCTCAAGGAAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTCCACGCAGCAGGCTaGCGGCCGCGTCGGGGCCGT +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLHAAG*RPRRGR
Trigger: ACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDITKAA*SGAGPP
Trigger: CGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGAT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGATGGAGGCCACGTGGTaGAGGCCGGCGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLMEATW*RPASPG
Trigger: CCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCAT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 90 bp CCGAACAGCTTCATCTGTGTCTCCTCGAACTGCCGCTCCAGCTCTTaGAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAGTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PNSFICVSSNCRSSS*RLRAPLGAARKCLA
Trigger: CGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGTTCGAGGAGACACAGATGAAGCTGTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGGCTCAGGGCGCCCTaGGGCGCTGCCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRLRAP*GAARKC
Trigger: GCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 90 bp CGCGCTGCTCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTTGTCATTaGTTCGTGCTGGGCGAGTTAAGCCATTCCAGGAGTGGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: RAARGSLPQPAGGCH*FVLGELSHSRSGFE
Trigger: CTCAAAACCACTCCTGGAATGGCTTAACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS GCA 90 bp CGGGCCAGGCTCGGCTTCACTTGTCCGAGGCTTGGAGGAACTGTGTaGGTGCGCCCATTTCCCCCAGCTTCCCGACTTGACAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RARLGFTCPRLGGTV*VRPFPPASRLDSSK
Trigger: CTTGCTGCTGTCAAGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCGGCAGCTCTGGCGCTaGATGTGGCGGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKRQLWR*MWRCRW
Trigger: CCACCTGCACCGCCACATCAAGCGCCAGAGCTGCCG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACTCCACGCAGCAGGCTaGCGGCCGCGTCGGGGCCGT +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARLHAAG*RPRRGR
Trigger: ACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGAG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARITKAA*SGAGPP
Trigger: CGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGAT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLITKAA*SGAGPP
Trigger: CGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGAT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp CTCAGGCAGCTGGGCAAAGGCACCGAAGTCCCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAATGGAGACAAGGAGGGTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: LRQLGKGTEVPWPEV*KEVRGEWRQGGSPV
Trigger: GACAGGAGACCCTCCTTGTCTCCATTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGGGACTTCGGTGCCTTTGCCCAGCTGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCCATAGCACAGGGATaGGGGACTCCAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPIAQG*GTPALG
Trigger: GCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 90 bp CAGGCCCTGGGTGGACTCCACGCCATCACTTCTTGCTCTTGTGGCTaGCCCACTCCTCAGGGTTGGACAGAGCTTCTGAGCTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QALGGLHAITSCSCG*PTPQGWTELLSSQL
Trigger: CAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS GCA 90 bp CCAGGCTCGGCTTCACTTGTCCGAGGCTTGGAGGAACTGTGTGCGTaGGCCCATTTCCCCCAGCTTCCCGACTTGACAGCAGCAAGGATC +
Preference number: 5 (lower is better)
Translates to: PGSASLVRGLEELCA*AHFPQLPDLTAARI
Trigger: GATCCTTGCTGCTGTCAAGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 90 bp TCCCTTAGCAGAGATTCGATGGAGAAGTCCCGGATCACCCCCAGATaGCCAGGACTGCCAGCCTGGAAGGAGTCAGGGAAGTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLSRDSMEKSRITPR*PGLPAWKESGKSLG
Trigger: CCCCAGGGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp GCCTCAGGCCCTGGGTGGACTCCACGCCATCACTTCTTGCTCTTGTaGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTGAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: ASGPGWTPRHHFLLL*LTHSSGLDRASELP
Trigger: TGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAGGCTCAGGGCGCCCTaGGGCGCTGCCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARRLRAP*GAARKC
Trigger: GCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGGCTCAGGGCGCCCTaGGGCGCTGCCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRLRAP*GAARKC
Trigger: GCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLPLQL*QAQGAL
Trigger: AAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAATGGAGGCCACGTGGTaGAGGCCGGCGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARMEATW*RPASPG
Trigger: CCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCAT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGATGGAGGCCACGTGGTaGAGGCCGGCGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLMEATW*RPASPG
Trigger: CCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCAT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGGGCACCCAGTTCTTaGTGGCATGGGCCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLWAPSS*WHGPVQ
Trigger: TTGCACCGGCCCATGCCACAAAGAACTGGGTGCCCA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGGAGGAGGAAGGGGTaGAGGGGGTTCTCACACAGC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGRRKG*RGFSHS
Trigger: GCTGTGTGAGAACCCCCTCAACCCCTTCCTCCTCCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 90 bp CCCAAACGCCCAGGCTCCAGGTCTAATGGGCGTGGATTCTGCTCATaGCTCAGGCCCTGGGTGGACTCCACGCCATCACTTCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: PKRPGSRSNGRGFCS*LRPWVDSTPSLLAL
Trigger: AAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACGCCCATTAGACCTGGAGCCTGGGCGTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS GCA 90 bp TGCAAATCTGCTCATTTCCTTGAGAGAAGACGCACGCAGTTCCCGTaGGTGTCGCTGGGAACAGACCTCGCACTACCCCGCGCGGCGACA +
Preference number: 5 (lower is better)
Translates to: CKSAHFLERRRTQFP*VSLGTDLALPRAAT
Trigger: TGTCGCCGCGCGGGGTAGTGCGAGGTCTGTTCCCAGCGACACGCACGGGAACTGCGTGCGTCTTCTCTCAAGGAAATGAGCAGATTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 90 bp CCAGGTCTAATGGGCGTGGATTCTGCTCATGCCTCAGGCCCTGGGTaGACTCCACGCCATCACTTCTTGCTCTTGTGGCTGACCCACTCC +
Preference number: 5 (lower is better)
Translates to: PGLMGVDSAHASGPG*TPRHHFLLLWLTHS
Trigger: GGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACGCCCATTAGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS CCA 90 bp GGCTCCAGGTCTAATGGGCGTGGATTCTGCTCATGCCTCAGGCCCTaGGTGGACTCCACGCCATCACTTCTTGCTCTTGTGGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: GSRSNGRGFCSCLRP*VDSTPSLLALVADP
Trigger: TGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACGCCCATTAGACCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCAGGCCATCGTGCCGTaGCTCATTGAGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRQAIVP*LIEAAQ
Trigger: CTGTGCAGCCTCAATGAGCAACGGCACGATGGCCTG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCAGGCCATCGTGCCGTaGCTCATTGAGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKQAIVP*LIEAAQ
Trigger: CTGTGCAGCCTCAATGAGCAACGGCACGATGGCCTG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTCCTGTCGGGGATGTaGGCCTTGGGGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLLSGM*ALGYRF
Trigger: GAACCTGTACCCCAAGGCCAACATCCCCGACAGGAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGACGGCAGCTCTGGCGCTaGATGTGGCGGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARRQLWR*MWRCRW
Trigger: CCACCTGCACCGCCACATCAAGCGCCAGAGCTGCCG...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTCCACGCAGCAGGCTaGCGGCCGCGTCGGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLHAAG*RPRRGR
Trigger: ACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLPLQL*QAQGAL
Trigger: AAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTGGGCACCCAGTTCTTaGTGGCATGGGCCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRWAPSS*WHGPVQ
Trigger: TTGCACCGGCCCATGCCACAAAGAACTGGGTGCCCA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGGGAGGAGGAAGGGGTaGAGGGGGTTCTCACACAGC +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDGRRKG*RGFSHS
Trigger: GCTGTGTGAGAACCCCCTCAACCCCTTCCTCCTCCC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 90 bp CTTGCTCTTGTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTaGGCTCCCAGCTGCTCAGAGGGGATCTGCATCCTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LALVADPLLRVGQSF*APSCSEGICILSGQ
Trigger: CTGCCCAGAAAGGATGCAGATCCCCTCTGAGCAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588053.5
ENST00000590178.5
ENST00000590374.5
ENST00000591405.5
ENST00000591526.5
ENST00000593159.5
CDS CCA 90 bp TCCCTCCCCACCCTCCAACCAGAAGTATTTGGCCGGGAGCCCCTTTaGTCCACCTGTACTGTTAAGCGCAGGACAGGACGATCTCACCAC +
Preference number: 5 (lower is better)
Translates to: SLPTLQPEVFGREPL*STCTVKRRTGRSHH
Trigger: GTGGTGAGATCGTCCTGTCCTGCGCTTAACAGTACAGGTGGACCAAAGGGGCTCCCGGCCAAATACTTCTGGTTGGAGGGTGGGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CCA 90 bp GGATGTTGGCCTTGGGGTACAGGTTCTCCCTTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCCCCAGATGGCCAGGACTGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GCWPWGTGSPLAEIR*RSPGSPPDGQDCQP
Trigger: AGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAAGGGAGAACCTGTACCCCAAGGCCAACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTCGTGCCGTTGCTCATaGAGGCTGCACAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSCRCS*RLHRTS
Trigger: TGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACGA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCTCCTGTCGGGGATGTaGGCCTTGGGGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDLLSGM*ALGYRF
Trigger: GAACCTGTACCCCAAGGCCAACATCCCCGACAGGAG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGGCACCCAGTTCTTaGTGGCATGGGCCGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWAPSS*WHGPVQ
Trigger: TTGCACCGGCCCATGCCACAAAGAACTGGGTGCCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCCCATCTCTTCGATGTaGGCCCTGAGAGCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRPISSM*ALRAPR
Trigger: TCTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCGCGCCTCCCGCACTaGGCTCCGGGACGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPARLPH*APGRSP
Trigger: AGGACTGCGTCCCGGAGCCAAGTGCGGGAGGCGCGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS TCA 90 bp CGCCCATTTCCCCCAGCTTCCCGACTTGACAGCAGCAAGGATCTTTaGGTCCTGCATGAGCGACACCTCGGGCAAGGACTGTACTCTGCT +
Preference number: 5 (lower is better)
Translates to: RPFPPASRLDSSKDL*VLHERHLGQGLYSA
Trigger: AGCAGAGTACAGTCCTTGCCCGAGGTGTCGCTCATGCAGGACTCAAAGATCCTTGCTGCTGTCAAGTCGGGAAGCTGGGGGAAATGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 90 bp GGGCGAATGGAGACAAGGAGGGTCTCCTGTCGGGGATGTTGGCCTTaGGGTACAGGTTCTCCCTTAGCAGAGATTCGATGGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GRMETRRVSCRGCWP*GTGSPLAEIRWRSP
Trigger: GGGACTTCTCCATCGAATCTCTGCTAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGACAGGAGACCCTCCTTGTCTCCATTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTCCAACCAGAAGTATTaGGCCGGGAGCCCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSNQKY*AGSPFG
Trigger: ACCAAAGGGGCTCCCGGCCAAATACTTCTGGTTGGA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGAGGATGTGCTTGACATaGCCAGCGGTGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRRMCLT*PAVMVS
Trigger: GCTCACCATCACCGCTGGCAATGTCAAGCACATCCT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGAGCATCCTGGCTGCGTaGAGGATGTGCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSILAA*RMCLTL
Trigger: CAATGTCAAGCACATCCTCAACGCAGCCAGGATGCT...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGCCTTGGGCTTCAGCTaGCGCTCTTCTACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARALGFS*RSSTRG
Trigger: GCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGGC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGCCTTGGGCTTCAGCTaGCGCTCTTCTACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLALGFS*RSSTRG
Trigger: GCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGGC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGGGGAGGAGGAAGGGGTaGAGGGGGTTCTCACACAGC +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLGRRKG*RGFSHS
Trigger: GCTGTGTGAGAACCCCCTCAACCCCTTCCTCCTCCC...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAGAGGGGACCTGGCCTaGTTAGGGATCAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRGDLA*LGIRLP
Trigger: TGGGAGTCTGATCCCTAACAAGGCCAGGTCCCCTCT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS TCA 90 bp AGGACTGCCAGCCTGGAAGGAGTCAGGGAAGTCCCTGGGGGTGTCTaGATAGGCCTTCTCTGTGAGATGGTCTGTCTTGGAAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RTASLEGVREVPGGV*IGLLCEMVCLGRAL
Trigger: CAAAGCCCTTCCAAGACAGACCATCTCACAGAGAAGGCCTATTCAGACACCCCCAGGGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp GTAAGCAGAGTGTCACTGGGCGCTGCTTCCTTCTGTCTCAATGGCTaGTTTCCCCAGAGCGGGGCTAACAGACCATCAGAGGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VSRVSLGAASFCLNG*FPQSGANRPSEERF
Trigger: GAACCTCTCCTCTGATGGTCTGTTAGCCCCGCTCTGGGGAAACCAGCCATTGAGACAGAAGGAAGCAGCGCCCAGTGACACTCTGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCGTGCCGTTGCTCATaGAGGCTGCACAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSCRCS*RLHRTS
Trigger: TGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGGTCAGGCAAGTTTTCTaGGTCAGCAAAGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLVRQVF*VSKVLR
Trigger: ACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGAC...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCGGGGATGTTGGCCTaGGGGTACAGGTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSGMLA*GYRFSL
Trigger: AAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGATGTGGATTTTCAGCTaGTCCTGCCTGGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRMWIFS*SCLVKR
Trigger: CCGCTTCACCAGGCAGGACAAGCTGAAAATCCACAT...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCAGCTACCTGTGGGCTTaGCTGAAGCTCGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSYLWA*LKLGSS
Trigger: GGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCCATCTCTTCGATGTaGGCCCTGAGAGCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPISSM*ALRAPR
Trigger: TCTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDDEGRL*PGVKRW
Trigger: CCACCTCTTAACACCTGGCAACAGTCTCCCCTCATC...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCACCCACTCCTCAGGGTaGGACAGAGCTTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSTHSSG*DRASEL
Trigger: GAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCATCACTTCTTGCTCTaGTGGCTGACCCACTCCTCA +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKHHFLL*WLTHSS
Trigger: TGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGGAAGGGGAGGGTTCTaGTCCAAGGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRGRGGF*SKVTKQ
Trigger: TTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS GCA 90 bp TTCCCCCAGCTTCCCGACTTGACAGCAGCAAGGATCTTTGAGTCCTaGATGAGCGACACCTCGGGCAAGGACTGTACTCTGCTCAGATCT +
Preference number: 5 (lower is better)
Translates to: FPQLPDLTAARIFES*MSDTSGKDCTLLRS
Trigger: AGATCTGAGCAGAGTACAGTCCTTGCCCGAGGTGTCGCTCATGCAGGACTCAAAGATCCTTGCTGCTGTCAAGTCGGGAAGCTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAGCATCCTGGCTGCGTaGAGGATGTGCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDSILAA*RMCLTL
Trigger: CAATGTCAAGCACATCCTCAACGCAGCCAGGATGCT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGGTCAGGCAAGTTTTCTaGGTCAGCAAAGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRVRQVF*VSKVLR
Trigger: ACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGAC...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTTGATCTTCCGATTCTaGATGACCAGATCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLIFRF*MTRSSG
Trigger: GCCACTGGATCTGGTCATCAAGAATCGGAAGATCAA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCCTTCTCCTCCTCCTaGATCTTCCGATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSFSSS*IFRFLM
Trigger: CATCAAGAATCGGAAGATCAAGGAGGAGGAGAAGGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLITKAA*SGAGPP
Trigger: CGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGAT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCCCATCTCTTCGATGTaGGCCCTGAGAGCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLPISSM*ALRAPR
Trigger: TCTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCCGGTGTTTTGTCTGTaGTCAGGAATCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKPVFCL*SGIRMR
Trigger: CCTCATCCTGATTCCTGACAACAGACAAAACACCGG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTACAGAGGAGGAAATTaGCAGTCCAGGAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDYRGGN*QSRKGR
Trigger: CCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGAGGGGACCTGGCCTaGTTAGGGATCAGACTCCCA +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRGDLA*LGIRLP
Trigger: TGGGAGTCTGATCCCTAACAAGGCCAGGTCCCCTCT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS TCA 90 bp TGGGCAACAGAACGAGACCCTTTCTCTTGGCCTCCACCAACCAAATaGCAGAGTCTTCAGCTGGCCCTTCAGGAGCTCAAAGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: WATERDPFSWPPPTK*QSLQLALQELKGGT
Trigger: TGTCCCTCCTTTGAGCTCCTGAAGGGCCAGCTGAAGACTCTGTCATTTGGTTGGTGGAGGCCAAGAGAAAGGGTCTCGTTCTGTTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585404.5
CDS GCA 90 bp CAGAGTCTTCAGCTGGCCCTTCAGGAGCTCAAAGGAGGGACACATTaGTCTAAGTCTGGGCTGTCAAAGAAACAGGCAAGCACCGATGCC +
Preference number: 5 (lower is better)
Translates to: QSLQLALQELKGGTH*SKSGLSKKQASTDA
Trigger: GGCATCGGTGCTTGCCTGTTTCTTTGACAGCCCAGACTTAGAGCAATGTGTCCCTCCTTTGAGCTCCTGAAGGGCCAGCTGAAGACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585404.5
CDS CCA 90 bp GTGAGATGGTCTGTCTTGGAAGGGCTTTGGTGGCAGCTGATGTCCTaGGGGTCAGGCAAGTTTTCTTGGTCAGCAAAGTCCTCCGTGTCA +
Preference number: 5 (lower is better)
Translates to: VRWSVLEGLWWQLMS*GSGKFSWSAKSSVS
Trigger: TGACACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGACAGACCATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCAGCCGGCGGGAGGTaGTCATTGATTCGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPAAGGR*SLIRAG
Trigger: CCCAGCACGAATCAATGACAACCTCCCGCCGGCTGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGCGTTGAGGATGTGCTaGACATTGCCAGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARALRMC*TLPAVM
Trigger: CATCACCGCTGGCAATGTCAAGCACATCCTCAACGC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTTGATCTTCCGATTCTaGATGACCAGATCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKLIFRF*MTRSSG
Trigger: GCCACTGGATCTGGTCATCAAGAATCGGAAGATCAA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTCCTTCTCCTCCTCCTaGATCTTCCGATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKSFSSS*IFRFLM
Trigger: CATCAAGAATCGGAAGATCAAGGAGGAGGAGAAGGA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTCAGGGAACATGTCCTaGAAGAAGTCATTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLSGNMS*KKSLGK
Trigger: CTTCCCTAATGACTTCTTCAAGGACATGTTCCCTGA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCCTTGGGCTTCAGCTaGCGCTCTTCTACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPALGFS*RSSTRG
Trigger: GCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCATGTGGATTTTCAGCTaGTCCTGCCTGGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSMWIFS*SCLVKR
Trigger: CCGCTTCACCAGGCAGGACAAGCTGAAAATCCACAT...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARDEGRL*PGVKRW
Trigger: CCACCTCTTAACACCTGGCAACAGTCTCCCCTCATC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGGGAGGAGGAAGGGGTaGAGGGGGTTCTCACACAGC +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPGRRKG*RGFSHS
Trigger: GCTGTGTGAGAACCCCCTCAACCCCTTCCTCCTCCC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGCTTAAGACTGGCTTGTaGCTGTCCTGTGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLLKTGL*LSCELS
Trigger: TGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAAG...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp TGTGTCTGTGTTCTGGATAGGAGAGGTTGCTTGCAGGCTGGTCTCTaGGTAAGCAGAGTGTCACTGGGCGCTGCTTCCTTCTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: CVCVLDRRGCLQAGL*VSRVSLGAASFCLN
Trigger: ATTGAGACAGAAGGAAGCAGCGCCCAGTGACACTCTGCTTACCCAGAGACCAGCCTGCAAGCAACCTCTCCTATCCAGAACACAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCAGGCCATCGTGCCGTaGCTCATTGAGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPQAIVP*LIEAAQ
Trigger: CTGTGCAGCCTCAATGAGCAACGGCACGATGGCCTG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAGCATCCTGGCTGCGTaGAGGATGTGCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARSILAA*RMCLTL
Trigger: CAATGTCAAGCACATCCTCAACGCAGCCAGGATGCT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGTCAGGGAACATGTCCTaGAAGAAGTCATTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRSGNMS*KKSLGK
Trigger: CTTCCCTAATGACTTCTTCAAGGACATGTTCCCTGA...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGATGTGGATTTTCAGCTaGTCCTGCCTGGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLMWIFS*SCLVKR
Trigger: CCGCTTCACCAGGCAGGACAAGCTGAAAATCCACAT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGATGGAGGCCACGTGGTaGAGGCCGGCGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLMEATW*RPASPG
Trigger: CCCTGGGCTCGCCGGCCTCAACCACGTGGCCTCCAT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCGGTGTTTTGTCTGTaGTCAGGAATCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSPVFCL*SGIRMR
Trigger: CCTCATCCTGATTCCTGACAACAGACAAAACACCGG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTAGAAACCGGTGTTTaGTCTGTTGTCAGGAATCAG +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLETGV*SVVRNQ
Trigger: CTGATTCCTGACAACAGACAAAACACCGGTTTCTAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGGGGTTCTCACACAGCAAAGGGGACCATCACTAGCAATGCCAAGGCCCTGAGGCTTAAGACTGGCTTGTaGCTGTCCTGTGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: GGSHTAKGTITSNAKALRLKTGL*LSCELS
Trigger: TGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAAG...CCTCAGGGCCTTGGCATTGCTAGTGATGGTCCCCTTTGCTGTGTGAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGAACCTTAAGACTGGCTaGTTGCTGTCCTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKNLKTG*LLSCEL
Trigger: AAGTTCACAGGACAGCAACAAGCCAGTCTTAAGGTT...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAGGAAGGGGAGGGTTCTaGTCCAAGGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARGRGGF*SKVTKQ
Trigger: TTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCC...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS CCA 90 bp ACCCTTTCTCTTGGCCTCCACCAACCAAATGACAGAGTCTTCAGCTaGCCCTTCAGGAGCTCAAAGGAGGGACACATTGCTCTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: TLSLGLHQPNDRVFS*PFRSSKEGHIALSL
Trigger: CAGACTTAGAGCAATGTGTCCCTCCTTTGAGCTCCTGAAGGGCCAGCTGAAGACTCTGTCATTTGGTTGGTGGAGGCCAAGAGAAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585404.5
CDS CCA 90 bp TGCCTGCTGCTTCTCGTGGATTTCCCAGAGCTTCCAGGTGCTGCCTaGCACAAGCACCGATGCCTTAGTTTTAAATTTCAGGACACCAGT +
Preference number: 5 (lower is better)
Translates to: CLLLLVDFPELPGAA*HKHRCLSFKFQDTS
Trigger: ACTGGTGTCCTGAAATTTAAAACTAAGGCATCGGTGCTTGTGCCAGGCAGCACCTGGAAGCTCTGGGAAATCCACGAGAAGCAGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTCGTGCCGTTGCTCATaGAGGCTGCACAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSCRCS*RLHRTS
Trigger: TGAGGTCCTGTGCAGCCTCAATGAGCAACGGCACGA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTTGATCTTCCGATTCTaGATGACCAGATCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLIFRF*MTRSSG
Trigger: GCCACTGGATCTGGTCATCAAGAATCGGAAGATCAA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCCTTCTCCTCCTCCTaGATCTTCCGATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSFSSS*IFRFLM
Trigger: CATCAAGAATCGGAAGATCAAGGAGGAGGAGAAGGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLLPLQL*QAQGAL
Trigger: AAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGAGCTACCTGTGGGCTTaGCTGAAGCTCGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSYLWA*LKLGSS
Trigger: GGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGTGTTAAGAGGTGGCCCCCATCTCTTCGATGTTGGCCCTGAGAGCCCCAAGCGAAGTTATGGAAGATaGTCCCTTGAATCACTAAGG +
Preference number: 5 (lower is better)
Translates to: QVLRGGPHLFDVGPESPKRSYGR*SLESLR
Trigger: CCTTAGTGATTCAAGGGACAATCTTCCATAACTTCG...CTTGGGGCTCTCAGGGCCAACATCGAAGAGATGGGGGCCACCTCTTAACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATAACCTTAAGACTGGCTaGTTGCTGTCCTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDNLKTG*LLSCEL
Trigger: AAGTTCACAGGACAGCAACAAGCCAGTCTTAAGGTT...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCCACGCCATCACTTCTaGCTCTTGTGGCTGACCCAC +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPPRHHF*LLWLTH
Trigger: GTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS GCA 90 bp CCAAACTGCGGCCTCATCAGCACCTGCTCTAGTCCTTGTTGTAACTaGTGGGACACCTTTGAAGACAAAGCCTTTCCCTCTGTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PNCGLISTCSSPCCN*WDTFEDKAFPSVPV
Trigger: AACAGGAACAGAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAGGCCGCAGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS GCA 90 bp GCCTTGTTAGGGATCAGACTCCCAAACTGCGGCCTCATCAGCACCTaGTCTAGTCCTTGTTGTAACTGCTGGGACACCTTTGAAGACAAA +
Preference number: 5 (lower is better)
Translates to: ALLGIRLPNCGLIST*SSPCCNCWDTFEDK
Trigger: TTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAGGCCGCAGTTTGGGAGTCTGATCCCTAACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS CCA 90 bp AACTGCGGCCTCATCAGCACCTGCTCTAGTCCTTGTTGTAACTGCTaGGACACCTTTGAAGACAAAGCCTTTCCCTCTGTTCCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: NCGLISTCSSPCCNC*DTFEDKAFPSVPVV
Trigger: CACAACAGGAACAGAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAGGCCGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLSSSMS*AMFSAR
Trigger: TCTGGCTGAGAACATGGCCAATGACATTGATGAGCT...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGCGTTGAGGATGTGCTaGACATTGCCAGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPALRMC*TLPAVM
Trigger: CATCACCGCTGGCAATGTCAAGCACATCCTCAACGC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCTCAGGGAACATGTCCTaGAAGAAGTCATTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSSGNMS*KKSLGK
Trigger: CTTCCCTAATGACTTCTTCAAGGACATGTTCCCTGA...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGATGAGGGGAGACTGTaGCCAGGTGTTAAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPDEGRL*PGVKRW
Trigger: CCACCTCTTAACACCTGGCAACAGTCTCCCCTCATC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCCCATAGCACAGGGATaGGGGACTCCAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLPIAQG*GTPALG
Trigger: GCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp TCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCCTGGGCTCTCCCTGTGGCCTTTTTGTTTGTaGTGTTTTTGCTCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SLCAHSTGIGDSSPGLSLWPFCL*CFCSGK
Trigger: TTTTCCTGAGCAAAAACACAACAAACAAAAAGGCCA...CAGGGAGAGCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATCGAAGTTATGGAAGATaGTCCCTTGAATCACTAAGG +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDRSYGR*SLESLR
Trigger: CCTTAGTGATTCAAGGGACAATCTTCCATAACTTCG...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGATCAGGGAACATGTCCTaGAAGAAGTCATTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARSGNMS*KKSLGK
Trigger: CTTCCCTAATGACTTCTTCAAGGACATGTTCCCTGA...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGATGTGGATTTTCAGCTaGTCCTGCCTGGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPMWIFS*SCLVKR
Trigger: CCGCTTCACCAGGCAGGACAAGCTGAAAATCCACAT...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACGGCAGCTCTGGCGCTaGATGTGGCGGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRQLWR*MWRCRW
Trigger: CCACCTGCACCGCCACATCAAGCGCCAGAGCTGCCG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATAGGCTCAGGGCGCCCTaGGGCGCTGCCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYRLRAP*GAARKC
Trigger: GCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTAGAAACCGGTGTTTaGTCTGTTGTCAGGAATCAG +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLETGV*SVVRNQ
Trigger: CTGATTCCTGACAACAGACAAAACACCGGTTTCTAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTCTGGCCTTTTTGTTaGTTGTGTTTTTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLWPFC*LCFCSG
Trigger: TCCTGAGCAAAAACACAACAAACAAAAAGGCCAGAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GGCACCCAGTTCTTTGTGGCATGGGCCGGTGCAAGTTTCTATATGAGAGCCAGAAACCTTAAGACTGGCTaGTTGCTGTCCTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: GTQFFVAWAGASFYMRARNLKTG*LLSCEL
Trigger: AAGTTCACAGGACAGCAACAAGCCAGTCTTAAGGTT...TCTGGCTCTCATATAGAAACTTGCACCGGCCCATGCCACAAAGAACTGGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCAGGCCATCGTGCCGTaGCTCATTGAGGCTGCACAG +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLQAIVP*LIEAAQ
Trigger: CTGTGCAGCCTCAATGAGCAACGGCACGATGGCCTG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGGTCAGGCAAGTTTTCTaGGTCAGCAAAGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPVRQVF*VSKVLR
Trigger: ACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGAC...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLPLQL*QAQGAL
Trigger: AAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCCGGTGTTTTGTCTGTaGTCAGGAATCAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPPVFCL*SGIRMR
Trigger: CCTCATCCTGATTCCTGACAACAGACAAAACACCGG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACCCATAGCACAGGGATaGGGGACTCCAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESPIAQG*GTPALG
Trigger: GCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CTGAGTTCGCAGAGCTACCTGTGGGCTTTGCTGAAGCTCGGAAGCTCCCCTGATTGGCCTTTTTGTTTGTaGTGTTTTTGCTCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LSSQSYLWALLKLGSSPDWPFCL*CFCSGK
Trigger: TTTTCCTGAGCAAAAACACAACAAACAAAAAGGCCA...ATCAGGGGAGCTTCCGAGCTTCAGCAAAGCCCACAGGTAGCTCTGCGAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCTCTGGCCTTTTTGTTaGTTGTGTTTTTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLLWPFC*LCFCSG
Trigger: TCCTGAGCAAAAACACAACAAACAAAAAGGCCAGAG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGAGAGTTTTTCTCGGCGGGATGTGGCGTGCGACCGAAGTTATGGAAGATTGCGAAGTTATGGAAGATaGTCCCTTGAATCACTAAGG +
Preference number: 5 (lower is better)
Translates to: AESFSRRDVACDRSYGRLRSYGR*SLESLR
Trigger: CCTTAGTGATTCAAGGGACAATCTTCCATAACTTCG...CAATCTTCCATAACTTCGGTCGCACGCCACATCCCGCCGAGAAAAACTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 90 bp ACAGCACCTAAGTTCCCAACCCTTCATTTTACAGAGGAGGAAATTTaGAGTCCAGGAAGGGGAGGGTTCTTGTCCAAGGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: TAPKFPTLHFTEEEI*SPGRGGFLSKVTKQ
Trigger: TTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTAAAATGAAGGGTTGGGAACTTAGGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586743.5
ENST00000593159.5
CDS GCA 90 bp GCCTCAGTTGTTGCATCAACCCTTCATTTTACAGAGGAGGAAATTTaGAGTCCAGGAAGGGGAGGGTTCTTGTCCAAGGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: ASVVASTLHFTEEEI*SPGRGGFLSKVTKQ
Trigger: TTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTAAAATGAAGGGTTGATGCAACAACTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588053.5
ENST00000588982.5
ENST00000591526.5
ENST00000592387.5
ENST00000592656.5
CDS GCA 90 bp GTGGATTTCCCAGAGCTTCCAGGTGCTGCCTGGCACAAGCACCGATaGCTTAGTTTTAAATTTCAGGACACCAGTTTTTCTGCAAATCTG +
Preference number: 5 (lower is better)
Translates to: VDFPELPGAAWHKHR*LSFKFQDTSFSANL
Trigger: CAGATTTGCAGAAAAACTGGTGTCCTGAAATTTAAAACTAAGGCATCGGTGCTTGTGCCAGGCAGCACCTGGAAGCTCTGGGAAATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS GCA 90 bp CACCTAAGTTCCTCACCAACCCTTCATTTTACAGAGGAGGAAATTTaGAGTCCAGGAAGGGGAGGGTTCTTGTCCAAGGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: HLSSSPTLHFTEEEI*SPGRGGFLSKVTKQ
Trigger: TTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTAAAATGAAGGGTTGGTGAGGAACTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589619.5
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTCGGGGATGTTGGCCTaGGGGTACAGGTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLSGMLA*GYRFSL
Trigger: AAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGTCCTTCTCCTCCTCCTaGATCTTCCGATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPSFSSS*IFRFLM
Trigger: CATCAAGAATCGGAAGATCAAGGAGGAGGAGAAGGA...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCCCATAGCACAGGGATaGGGGACTCCAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYPIAQG*GTPALG
Trigger: GCCCAGGGCTGGAGTCCCCAATCCCTGTGCTATGGG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CAGGAAGAGCTGAAGTCTCTTTGTGCCCATAGCACAGGGATTGGGGACTCCAGCCTAAGGCAAACTTTGTaGAGTGTCATTTTACGTAGA +
Preference number: 5 (lower is better)
Translates to: QEELKSLCAHSTGIGDSSLRQTL*SVILRR
Trigger: TCTACGTAAAATGACACTCAACAAAGTTTGCCTTAG...GCTGGAGTCCCCAATCCCTGTGCTATGGGCACAAAGAGACTTCAGCTCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGAGGATGTGCTTGACATaGCCAGCGGTGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLRMCLT*PAVMVS
Trigger: GCTCACCATCACCGCTGGCAATGTCAAGCACATCCT...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGGCGTTGAGGATGTGCTaGACATTGCCAGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLALRMC*TLPAVM
Trigger: CATCACCGCTGGCAATGTCAAGCACATCCTCAACGC...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACGGGCTCCTGGCCTTTaGGGAAAAGATGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRAPGL*GKDARL
Trigger: GAGACGGGCATCTTTTCCCAAAAGGCCAGGAGCCCG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 90 bp GAAGACAAGGGTCTGGAGACAGAAGCTTTCATGTCACCTATGCCATaGCTGGTCATAAAGTTCTTTGTCTCATATGCAGGTGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: EDKGLETEAFMSPMP*LVIKFFVSYAGVFS
Trigger: AGAGAAGACACCTGCATATGAGACAAAGAACTTTATGACCAGGCATGGCATAGGTGACATGAAAGCTTCTGTCTCCAGACCCTTGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATCGGGGATGTTGGCCTaGGGGTACAGGTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSGMLA*GYRFSL
Trigger: AAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTCCTGTCGGGGATGTaGGCCTTGGGGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLLSGM*ALGYRF
Trigger: GAACCTGTACCCCAAGGCCAACATCCCCGACAGGAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp CCAACAGAGCATTTCTTTCTATGTGGCAGGTGGGTAGTTCTCAAAAAGACCCCGCTCTGGCCTTTTTGTTaGTTGTGTTTTTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PTEHFFLCGRWVVLKKTPLWPFC*LCFCSG
Trigger: TCCTGAGCAAAAACACAACAAACAAAAAGGCCAGAG...CGGGGTCTTTTTGAGAACTACCCACCTGCCACATAGAAAGAAATGCTCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 90 bp ACCAGTTTTTCTGCAAATCTGCTCATTTCTATTAGCCAGAAGAACTaGGAGACTGCGTTACAAAGCACTACTGGCTTTGGACTCAACCCA +
Preference number: 5 (lower is better)
Translates to: TSFSANLLISISQKN*ETALQSTTGFGLNP
Trigger: TGGGTTGAGTCCAAAGCCAGTAGTGCTTTGTAACGCAGTCTCCCAGTTCTTCTGGCTAATAGAAATGAGCAGATTTGCAGAAAAACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGGCGGGAGGTTGTCATaGATTCGTGCTGGGCGAGTT +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYGGRLS*IRAGRV
Trigger: AACTCGCCCAGCACGAATCAATGACAACCTCCCGCC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAGGATGTGCTTGACATaGCCAGCGGTGATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRMCLT*PAVMVS
Trigger: GCTCACCATCACCGCTGGCAATGTCAAGCACATCCT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 90 bp GCAGGACAGGACGATCTCACCACTCGCGCGTTACGCTTCACTTTATaGCACCAAATTAAGATCTTTGGAAAAGGTAAAGCAGAAATAAAG +
Preference number: 5 (lower is better)
Translates to: AGQDDLTTRALRFTL*HQIKIFGKGKAEIK
Trigger: CTTTATTTCTGCTTTACCTTTTCCAAAGATCTTAATTTGGTGTCATAAAGTGAAGCGTAACGCGCGAGTGGTGAGATCGTCCTGTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATGCGTTGAGGATGTGCTaGACATTGCCAGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYALRMC*TLPAVM
Trigger: CATCACCGCTGGCAATGTCAAGCACATCCTCAACGC...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGTGTTTCCCCATGGACTaGGGGAGTACAAAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLCFPMD*GSTKLL
Trigger: TAGAAGCTTTGTACTCCCCAAGTCCATGGGGAAACA...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATAGCATCCTGGCTGCGTaGAGGATGTGCTTGACATTG +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYSILAA*RMCLTL
Trigger: CAATGTCAAGCACATCCTCAACGCAGCCAGGATGCT...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAGTCAGGCAAGTTTTCTaGGTCAGCAAAGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESVRQVF*VSKVLR
Trigger: ACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGAC...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATTACAGAGGAGGAAATTaGCAGTCCAGGAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYYRGGN*QSRKGR
Trigger: CCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTA...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSSSMS*AMFSAR
Trigger: TCTGGCTGAGAACATGGCCAATGACATTGATGAGCT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATTGATCTTCCGATTCTaGATGACCAGATCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLIFRF*MTRSSG
Trigger: GCCACTGGATCTGGTCATCAAGAATCGGAAGATCAA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACTTAAGACTGGCTTGTaGCTGTCCTGTGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESLKTGL*LSCELS
Trigger: TGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAAG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCAAACCTTAAGACTGGCTaGTTGCTGTCCTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESNLKTG*LLSCEL
Trigger: AAGTTCACAGGACAGCAACAAGCCAGTCTTAAGGTT...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp GCTGGATGTGATAAAACTAAGTCCAGAAAGATAAACTGTTTCCCCATGGACTTGCTAAGGCAAACTTTGTaGAGTGTCATTTTACGTAGA +
Preference number: 5 (lower is better)
Translates to: AGCDKTKSRKINCFPMDLLRQTL*SVILRR
Trigger: TCTACGTAAAATGACACTCAACAAAGTTTGCCTTAG...CAAGTCCATGGGGAAACAGTTTATCTTTCTGGACTTAGTTTTATCACATCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCACGAAGTTATGGAAGATaGTCCCTTGAATCACTAAGG +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESRSYGR*SLESLR
Trigger: CCTTAGTGATTCAAGGGACAATCTTCCATAACTTCG...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTTAAGACTGGCTTGTaGCTGTCCTGTGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLKTGL*LSCELS
Trigger: TGAAAGTTCACAGGACAGCAACAAGCCAGTCTTAAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS-3UTR CAA 90 bp AAAAACAAACAGATAAACCCTAGAAACCGGTGTTTTGTCTGTTGTCAGGAATCATCTATGCCTCAGTTGTaGCATCAACCCTTCATTTTA +
Preference number: 5 (lower is better)
Translates to: KNKQINPRNRCFVCCQESSMPQL*HQPFIL
Trigger: TAAAATGAAGGGTTGATGCAACAACTGAGGCATAGA...TGATTCCTGACAACAGACAAAACACCGGTTTCTAGGGTTTATCTGTTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588982.5
CDS-3UTR CAA 90 bp ACAACCCATTTGCTTCAAGTTCTTGATCATACAGTACTCAACATCTTTGGATATCTAAGGCAAACTTTGTaGAGTGTCATTTTACGTAGA +
Preference number: 5 (lower is better)
Translates to: TTHLLQVLDHTVLNIFGYLRQTL*SVILRR
Trigger: TCTACGTAAAATGACACTCAACAAAGTTTGCCTTAG...ATATCCAAAGATGTTGAGTACTGTATGATCAAGAACTTGAAGCAAATGGGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 90 bp TGGCCGCCCACCTCGCCCAGCGCAGGGGGCATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCGGGCCCGAAGAGCAGGCTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: WPPTSPSAGGITKAA*SGAGPPGPKSRLAA
Trigger: GGCCGCCAGCCTGCTCTTCGGGCCCGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGATGCCCCCTGCGCTGGGCGAGGTGGGCGGCCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 72 bp GCCAGGGTCCCGGGCTGGGAATCCACGCGGCCGCGCTaGTCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: ARVPGWESTRPR*SREPAAAGGRL
Trigger: CAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCGCGGCCGCGTGGATTCCCAGCCCGGGACCCTGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CCA 72 bp CCGGGCCGTGTCCTGAGCGCCGCCAGGGTCCCGGGCTaGGAATCCACGCGGCCGCGCTGCTCGCGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: PGRVLSAARVPG*ESTRPRCSREP
Trigger: AGGCTCCCGCGAGCAGCGCGGCCGCGTGGATTCCCAGCCCGGGACCCTGGCGGCGCTCAGGACACGGCCCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CAA 72 bp ACCTCGCCCAGCGCAGGGGGCATCACGAAGGCCGCCTaGTCGGGGGCCGGGCCGCCGGGCCCGAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: TSPSAGGITKAA*SGAGPPGPKSR
Trigger: CCTGCTCTTCGGGCCCGGCGGCCCGGCCCCCGACAAGGCGGCCTTCGTGATGCCCCCTGCGCTGGGCGAGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp GGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAGTGCTTaGCGGGGCTGGGGCCCGGGAGGCACACAGCTGCGC +
Preference number: 6 (lower is better)
Translates to: GSGRPWALPGSA*RGWGPGGTQLR
Trigger: GCGCAGCTGTGTGCCTCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp TGCGCGCCTCCCGCACTTGGCTCCGGGACGCAGTCCTaGCGTCCTCCTTCGCCGCCGGTGTCCGCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: CAPPALGSGTQS*RPPSPPVSAGP
Trigger: GGGACCGGCGGACACCGGCGGCGAAGGAGGACGCCAGGACTGCGTCCCGGAGCCAAGTGCGGGAGGCGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590800.6
CDS CAA 90 bp AGCTCTTGCAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAGTGCTaGGCGGGGCTGGGGCCCGGGAGGCACACAGCTGCGCCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSCRLRAPLGAARKC*AGLGPGRHTAAPPR
Trigger: CCTGGGCGGCGCAGCTGTGTGCCTCCCGGGCCCCAGCCCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 72 bp CCTCCACGCAGCAGGCTTGCGGCCGCGTCGGGGCCGTaGCATGCGGCAGCTCTGGCGCTTGATGTGGCGGTG +
Preference number: 6 (lower is better)
Translates to: PPRSRLAAASGP*HAAALALDVAV
Trigger: CACCGCCACATCAAGCGCCAGAGCTGCCGCATGGCACGGCCCCGACGCGGCCGCAAGCCTGCTGCGTGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp ACTGCCGCTCCAGCTCTTGCAGGCTCAGGGCGCCCTTaGGCGCTGCCAGGAAGTGCTTGGCGGGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: TAAPALAGSGRP*ALPGSAWRGWG
Trigger: GCCCCAGCCCCGCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 72 bp GCGCGGCGACAGGCACCGGGCCAGGCTCGGCTTCACTaGTCCGAGGCTTGGAGGAACTGTGTGCGTGCGCCC +
Preference number: 6 (lower is better)
Translates to: ARRQAPGQARLH*SEAWRNCVRAP
Trigger: GGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCGGTGCCTGTCGCCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CAA 90 bp CACTACCCCGCGCGGCGACAGGCACCGGGCCAGGCTCGGCTTCACTaGTCCGAGGCTTGGAGGAACTGTGTGCGTGCGCCCATTTCCCCC +
Preference number: 6 (lower is better)
Translates to: HYPARRQAPGQARLH*SEAWRNCVRAPISP
Trigger: GGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCGGTGCCTGTCGCCGCGCGGGGTAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CAA 90 bp ACGCGGCCGCGCTGCTCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTaGTCATTGATTCGTGCTGGGCGAGTTAAGCCATTCCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: TRPRCSREPAAAGGR*SLIRAGRVKPFQEW
Trigger: CCACTCCTGGAATGGCTTAACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCGCGGCCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CAA 90 bp GCGGCGACAGGCACCGGGCCAGGCTCGGCTTCACTTGTCCGAGGCTaGGAGGAACTGTGTGCGTGCGCCCATTTCCCCCAGCTTCCCGAC +
Preference number: 6 (lower is better)
Translates to: AATGTGPGSASLVRG*EELCACAHFPQLPD
Trigger: GTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCGGTGCCTGTCGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS GCA 72 bp CAGGCAGCCAGGACGGAGCGGTGGGTCCGATACTCCTaGTCCTGCACCACCAGGAGCACGTCACACAGCAGG +
Preference number: 6 (lower is better)
Translates to: QAARTERWVRYS*SCTTRSTSHSR
Trigger: CCTGCTGTGTGACGTGCTCCTGGTGGTGCAGGAGCAGGAGTATCGGACCCACCGCTCCGTCCTGGCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590437.5
ENST00000590800.6
CDS CAA 72 bp GGCACCGGGCCAGGCTCGGCTTCACTTGTCCGAGGCTaGGAGGAACTGTGTGCGTGCGCCCATTTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GTGPGSASLVRG*EELCACAHFPQ
Trigger: CTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAGCCTGGCCCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS TCA 72 bp GTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTaGGCTCCCAGCTGCTCAGAGGGGATCTCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: VADPLLRVGQSF*APSCSEGISAR
Trigger: GCGCGCGGAGATCCCCTCTGAGCAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588970.5
ENST00000589194.5
ENST00000590800.6
ENST00000590855.5
CDS CCA 72 bp TTGAGAGAAGACGCACGCAGTTCCCGTGCGTGTCGCTaGGAACAGACCTCGCACTACCCCGCGCGGCGACAG +
Preference number: 6 (lower is better)
Translates to: LREDARSSRACR*EQTSHYPARRQ
Trigger: CTGTCGCCGCGCGGGGTAGTGCGAGGTCTGTTCCCAGCGACACGCACGGGAACTGCGTGCGTCTTCTCTCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CAA 72 bp CGCTGCTCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTaGTCATTGATTCGTGCTGGGCGAGTTAAGCCATTC +
Preference number: 6 (lower is better)
Translates to: RCSREPAAAGGR*SLIRAGRVKPF
Trigger: GAATGGCTTAACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGAGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CAA 90 bp CCCGAACAGCTTCATCTGTGTCTCCTCGAACTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAGTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: PEQLHLCLLELPLQL*QAQGALGRCQEVLG
Trigger: GCCAAGCACTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGTTCGAGGAGACACAGATGAAGCTGTTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 72 bp CGCGGGAGCCTGCCGCAGCCGGCGGGAGGTTGTCATTaGTTCGTGCTGGGCGAGTTAAGCCATTCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: RGSLPQPAGGCH*FVLGELSHSRS
Trigger: ACTCCTGGAATGGCTTAACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS GCA 72 bp AGATGGGGCACTGCTGAGAGGCCTTGGGCTTCAGCTTaGGCTCTTCTACCAGGGGCCAGGGTGGGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: RWGTAERPWASA*ALLPGARVGRG
Trigger: GCCTCTTCCCACCCTGGCCCCTGGTAGAAGAGCGCAAGCTGAAGCCCAAGGCCTCTCAGCAGTGCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 72 bp TTCATCTGTGTCTCCTCGAACTGCCGCTCCAGCTCTTaGAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FICVSSNCRSSS*RLRAPLGAARK
Trigger: CTTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGTTCGAGGAGACACAGATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp TCCCGGATCACCCCCAGATGGCCAGGACTGCCAGCCTaGAAGGAGTCAGGGAAGTCCCTGGGGGTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: SRITPRWPGLPA*KESGKSLGVSE
Trigger: TTCAGACACCCCCAGGGACTTCCCTGACTCCTTCCAGGCTGGCAGTCCTGGCCATCTGGGGGTGATCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 72 bp TCGCGGGAGCCTGCCGCAGCCGGCGGGAGGTTGTCATaGATTCGTGCTGGGCGAGTTAAGCCATTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SREPAAAGGRLS*IRAGRVKPFQE
Trigger: CTCCTGGAATGGCTTAACTCGCCCAGCACGAATCAATGACAACCTCCCGCCGGCTGCGGCAGGCTCCCGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CAA 72 bp CTTCATCTGTGTCTCCTCGAACTGCCGCTCCAGCTCTaGCAGGCTCAGGGCGCCCTTGGGCGCTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: LHLCLLELPLQL*QAQGALGRCQE
Trigger: TTCCTGGCAGCGCCCAAGGGCGCCCTGAGCCTGCAAGAGCTGGAGCGGCAGTTCGAGGAGACACAGATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp CCCTGGCCAGAGGTGTGGAAAGAAGTCCGGGGCGAATaGAGACAAGGAGGGTCTCCTGTCGGGGATGTTGGC +
Preference number: 6 (lower is better)
Translates to: PWPEVWKEVRGE*RQGGSPVGDVG
Trigger: GCCAACATCCCCGACAGGAGACCCTCCTTGTCTCCATTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp CTGGGCAAAGGCACCGAAGTCCCCTGGCCAGAGGTGTaGAAAGAAGTCCGGGGCGAATGGAGACAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: LGKGTEVPWPEV*KEVRGEWRQGG
Trigger: CCCTCCTTGTCTCCATTCGCCCCGGACTTCTTTCCACACCTCTGGCCAGGGGACTTCGGTGCCTTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 72 bp GCCTCAGGCCCTGGGTGGACTCCACGCCATCACTTCTaGCTCTTGTGGCTGACCCACTCCTCAGGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: ASGPGWTPRHHF*LLWLTHSSGLD
Trigger: GTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS TCA 72 bp GTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTaGGCTCCCAGCTGCTCAGAGGGGATCTCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: VADPLLRVGQSF*APSCSEGISVS
Trigger: GGACACTGAGATCCCCTCTGAGCAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588566.5
CDS GCA 72 bp CCAGGCTCCAGGTCTAATGGGCGTGGATTCTGCTCATaGCTCAGGCCCTGGGTGGACTCCACGCCATCACTT +
Preference number: 6 (lower is better)
Translates to: PGSRSNGRGFCS*LRPWVDSTPSL
Trigger: AAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACGCCCATTAGACCTGGAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS GCA 72 bp CTCGGCTTCACTTGTCCGAGGCTTGGAGGAACTGTGTaGGTGCGCCCATTTCCCCCAGCTTCCCGACTTGAC +
Preference number: 6 (lower is better)
Translates to: LGFTCPRLGGTV*VRPFPPASRLD
Trigger: GTCAAGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS GCA 72 bp GCTCATTTCCTTGAGAGAAGACGCACGCAGTTCCCGTaGGTGTCGCTGGGAACAGACCTCGCACTACCCCGC +
Preference number: 6 (lower is better)
Translates to: AHFLERRRTQFP*VSLGTDLALPR
Trigger: GCGGGGTAGTGCGAGGTCTGTTCCCAGCGACACGCACGGGAACTGCGTGCGTCTTCTCTCAAGGAAATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CAA 90 bp CATGCCTCAGGCCCTGGGTGGACTCCACGCCATCACTTCTTGCTCTaGTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: HASGPGWTPRHHFLL*WLTHSSGLDRASEL
Trigger: GAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS TCA 72 bp GTGGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCTaGGCTCCCAGCTGCTCAGAGGGGATCTGCATCCTT +
Preference number: 6 (lower is better)
Translates to: VADPLLRVGQSF*APSCSEGICIL
Trigger: AAGGATGCAGATCCCCTCTGAGCAGCTGGGAGCTCAGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588053.5
ENST00000590178.5
ENST00000590374.5
ENST00000591405.5
ENST00000591526.5
ENST00000593159.5
CDS TCA 72 bp CCCCCAGCTTCCCGACTTGACAGCAGCAAGGATCTTTaGGTCCTGCATGAGCGACACCTCGGGCAAGGACTG +
Preference number: 6 (lower is better)
Translates to: PPASRLDSSKDL*VLHERHLGQGL
Trigger: CAGTCCTTGCCCGAGGTGTCGCTCATGCAGGACTCAAAGATCCTTGCTGCTGTCAAGTCGGGAAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS GCA 72 bp GCTTCACTTGTCCGAGGCTTGGAGGAACTGTGTGCGTaGGCCCATTTCCCCCAGCTTCCCGACTTGACAGCA +
Preference number: 6 (lower is better)
Translates to: ASLVRGLEELCA*AHFPQLPDLTA
Trigger: TGCTGTCAAGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAAGCCTCGGACAAGTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 72 bp ATGGGCGTGGATTCTGCTCATGCCTCAGGCCCTGGGTaGACTCCACGCCATCACTTCTTGCTCTTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: MGVDSAHASGPG*TPRHHFLLLWL
Trigger: CAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGGGCCTGAGGCATGAGCAGAATCCACGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS CAA 90 bp TTGGAGGAACTGTGTGCGTGCGCCCATTTCCCCCAGCTTCCCGACTaGACAGCAGCAAGGATCTTTGAGTCCTGCATGAGCGACACCTCG +
Preference number: 6 (lower is better)
Translates to: LEELCACAHFPQLPD*TAARIFESCMSDTS
Trigger: CGAGGTGTCGCTCATGCAGGACTCAAAGATCCTTGCTGCTGTCAAGTCGGGAAGCTGGGGGAAATGGGCGCACGCACACAGTTCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS GCA 72 bp GGCTGGTCTCTGGGTAAGCAGAGTGTCACTGGGCGCTaGTTCCTTCTGTCTCAATGGCTGGTTTCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: GWSLGKQSVTGR*FLLSQWLVSPE
Trigger: CTCTGGGGAAACCAGCCATTGAGACAGAAGGAAGCAGCGCCCAGTGACACTCTGCTTACCCAGAGACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CCA 72 bp CCTTGGGGTACAGGTTCTCCCTTAGCAGAGATTCGATaGAGAAGTCCCGGATCACCCCCAGATGGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: PWGTGSPLAEIR*RSPGSPPDGQD
Trigger: GTCCTGGCCATCTGGGGGTGATCCGGGACTTCTCCATCGAATCTCTGCTAAGGGAGAACCTGTACCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp CTCCTTGATCTTCCGATTCTTGATGACCAGATCCAGTaGCCCACTGTCCATGGGCTGCTCAGGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLDLPILDDQIQ*PTVHGLLRQLG
Trigger: GCCCAGCTGCCTGAGCAGCCCATGGACAGTGGGCCACTGGATCTGGTCATCAAGAATCGGAAGATCAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp GTGTCACTGGGCGCTGCTTCCTTCTGTCTCAATGGCTaGTTTCCCCAGAGCGGGGCTAACAGACCATCAGAG +
Preference number: 6 (lower is better)
Translates to: VSLGAASFCLNG*FPQSGANRPSE
Trigger: CTCTGATGGTCTGTTAGCCCCGCTCTGGGGAAACCAGCCATTGAGACAGAAGGAAGCAGCGCCCAGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CCA 72 bp CCTGGGTGGACTCCACGCCATCACTTCTTGCTCTTGTaGCTGACCCACTCCTCAGGGTTGGACAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: PGWTPRHHFLLL*LTHSSGLDRAS
Trigger: AGAAGCTCTGTCCAACCCTGAGGAGTGGGTCAGCCACAAGAGCAAGAAGTGATGGCGTGGAGTCCACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000585404.5
ENST00000586743.5
ENST00000587107.5
ENST00000588028.1
ENST00000588053.5
ENST00000588149.5
ENST00000588566.5
ENST00000588970.5
ENST00000589077.5
ENST00000589170.5
ENST00000589194.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590800.6
ENST00000590855.5
ENST00000591405.5
ENST00000591526.5
ENST00000592656.5
ENST00000593159.5
CDS TCA 72 bp GGAAGTCCCTGGGGGTGTCTGAATAGGCCTTCTCTGTaGGATGGTCTGTCTTGGAAGGGCTTTGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: GSPWGCLNRPSL*DGLSWKGFGGS
Trigger: GCTGCCACCAAAGCCCTTCCAAGACAGACCATCTCACAGAGAAGGCCTATTCAGACACCCCCAGGGACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS TCA 72 bp TCTCAGCCAGAGCCCACGGTAATCAGGCACGCTCATTaGCAGGCCAGCACTCCTCTTGAAGACAAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SQPEPTVIRHAH*QASTPLEDKGL
Trigger: CAGACCCTTGTCTTCAAGAGGAGTGCTGGCCTGTCAATGAGCGTGCCTGATTACCGTGGGCTCTGGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589077.5
CDS GCA 72 bp AGGAGGCCAAGCTTCACAGTGTCTCCCCGGGGCGCTTaGAACAAGCAAACAAGCAAAGAAAGCACCGATGCC +
Preference number: 6 (lower is better)
Translates to: RRPSFTVSPRGA*NKQTSKESTDA
Trigger: GGCATCGGTGCTTTCTTTGCTTGTTTGCTTGTTGCAAGCGCCCCGGGGAGACACTGTGAAGCTTGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588970.5
CDS CCA 72 bp ACCCTCCAACCAGAAGTATTTGGCCGGGAGCCCCTTTaGTCCACCTGTACTGTTAAGCGCAGGACAGGACGA +
Preference number: 6 (lower is better)
Translates to: TLQPEVFGREPL*STCTVKRRTGR
Trigger: TCGTCCTGTCCTGCGCTTAACAGTACAGGTGGACCAAAGGGGCTCCCGGCCAAATACTTCTGGTTGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535628.6
CDS CCA 72 bp GAGACAAGGAGGGTCTCCTGTCGGGGATGTTGGCCTTaGGGTACAGGTTCTCCCTTAGCAGAGATTCGATGG +
Preference number: 6 (lower is better)
Translates to: ETRRVSCRGCWP*GTGSPLAEIRW
Trigger: CCATCGAATCTCTGCTAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGACAGGAGACCCTCCTTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp CTCCTCCAAAACAGAGCCAATGCCTGCTGCTTCTCGTaGATTTCCCAGAGCTTCCAGGTGCTGCCTGGCACA +
Preference number: 6 (lower is better)
Translates to: LLQNRANACCFS*ISQSFQVLPGT
Trigger: TGTGCCAGGCAGCACCTGGAAGCTCTGGGAAATCCACGAGAAGCAGCAGGCATTGGCTCTGTTTTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS CAA 72 bp GGAGACAAGGAGGGTCTCCTGTCGGGGATGTTGGCCTaGGGGTACAGGTTCTCCCTTAGCAGAGATTCGATG +
Preference number: 6 (lower is better)
Translates to: GDKEGLLSGMLA*GYRFSLSRDSM
Trigger: CATCGAATCTCTGCTAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGACAGGAGACCCTCCTTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 72 bp CAGGAGGCCAAGCTTCACAGTGTCTCCCCGGGGCGCTaGCAACAAGCAAACAAGCAAAGAAAGCACCGATGC +
Preference number: 6 (lower is better)
Translates to: QEAKLHSVSPGR*QQANKQRKHRC
Trigger: GCATCGGTGCTTTCTTTGCTTGTTTGCTTGTTGCAAGCGCCCCGGGGAGACACTGTGAAGCTTGGCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588970.5
CDS CAA 90 bp TCTGTATTCAGAGAGCAAACTTGGGCAGAGAGAGGGGACCTGGCCTaGTTAGGGATCAGACTCCCAAACTGCGGCCTCATCAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: SVFREQTWAERGDLA*LGIRLPNCGLISTC
Trigger: GCAGGTGCTGATGAGGCCGCAGTTTGGGAGTCTGATCCCTAACAAGGCCAGGTCCCCTCTCTCTGCCCAAGTTTGCTCTCTGAATACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS GCA 72 bp CACGTTCACGATGCACTGGATCTCCAGCATCCTGGCTaGGTTGAGGATGTGCTTGACATTGCCAGCGGTGAT +
Preference number: 6 (lower is better)
Translates to: HVHDALDLQHPG*VEDVLDIASGD
Trigger: ATCACCGCTGGCAATGTCAAGCACATCCTCAACGCAGCCAGGATGCTGGAGATCCAGTGCATCGTGAACGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS GCA 72 bp CTTCCCGACTTGACAGCAGCAAGGATCTTTGAGTCCTaGATGAGCGACACCTCGGGCAAGGACTGTACTCTG +
Preference number: 6 (lower is better)
Translates to: LPDLTAARIFES*MSDTSGKDCTL
Trigger: CAGAGTACAGTCCTTGCCCGAGGTGTCGCTCATGCAGGACTCAAAGATCCTTGCTGCTGTCAAGTCGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 72 bp GCCTTCTCTGTGAGATGGTCTGTCTTGGAAGGGCTTTaGTGGCAGCTGATGTCCTGGGGGTCAGGCAAGTTT +
Preference number: 6 (lower is better)
Translates to: AFSVRWSVLEGL*WQLMSWGSGKF
Trigger: AAACTTGCCTGACCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGACAGACCATCTCACAGAGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp CGAATGGAGACAAGGAGGGTCTCCTGTCGGGGATGTTaGCCTTGGGGTACAGGTTCTCCCTTAGCAGAGATT +
Preference number: 6 (lower is better)
Translates to: RMETRRVSCRGC*PWGTGSPLAEI
Trigger: AATCTCTGCTAAGGGAGAACCTGTACCCCAAGGCCAACATCCCCGACAGGAGACCCTCCTTGTCTCCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 90 bp TCTGACTTTGCCATCTGTGTCTGTGTTCTGGATAGGAGAGGTTGCTaGCAGGCTGGTCTCTGGGTAAGCAGAGTGTCACTGGGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: SDFAICVCVLDRRGC*QAGLWVSRVSLGAA
Trigger: AGCAGCGCCCAGTGACACTCTGCTTACCCAGAGACCAGCCTGCAAGCAACCTCTCCTATCCAGAACACAGACACAGATGGCAAAGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCACGGTAATCAGGCACGCTCA +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARAHGNQARS
Trigger: TGAGCGTGCCTGATTACCGTGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589077.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCTTTCCCAGGTCGATCTGCAG +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARALSQVDLQ
Trigger: CTGCAGATCGACCTGGGAAAGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588970.5
CDS TCA 72 bp TCGCTGGTGATTACCACGGTAATCAGGCACGCTCATTaGCAGGCCAGCACTCCTCTTGAAGACAAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SLVITTVIRHAH*QASTPLEDKGL
Trigger: CAGACCCTTGTCTTCAAGAGGAGTGCTGGCCTGTCAATGAGCGTGCCTGATTACCGTGGTAATCACCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS GCA 72 bp CAGCTGGCCCTTCAGGAGCTCAAAGGAGGGACACATTaGTCTAAGTCTGGGCTGTCAAAGAAACAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: QLALQELKGGTH*SKSGLSKKQAS
Trigger: GCTTGCCTGTTTCTTTGACAGCCCAGACTTAGAGCAATGTGTCCCTCCTTTGAGCTCCTGAAGGGCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585404.5
CDS GCA 72 bp GGGATCAGACTCCCAAACTGCGGCCTCATCAGCACCTaGTCTAGTCCTTGTTGTAACTGCTGGGACACCTTT +
Preference number: 6 (lower is better)
Translates to: GIRLPNCGLIST*SSPCCNCWDTF
Trigger: AAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAGGCCGCAGTTTGGGAGTCTGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS CCA 72 bp TGGCAGCTGATGTCCTGGGGGTCAGGCAAGTTTTCTTaGTCAGCAAAGTCCTCCGTGTCATCATCGTCATCC +
Preference number: 6 (lower is better)
Translates to: WQLMSWGSGKFS*SAKSSVSSSSS
Trigger: GGATGACGATGATGACACGGAGGACTTTGCTGACCAAGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CCA 72 bp AGAGGGGATCTGACTTTGCCATCTGTGTCTGTGTTCTaGATAGGAGAGGTTGCTTGCAGGCTGGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RGDLTLPSVSVF*IGEVACRLVSG
Trigger: CCCAGAGACCAGCCTGCAAGCAACCTCTCCTATCCAGAACACAGACACAGATGGCAAAGTCAGATCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CCA 72 bp CTTGGCCTCCACCAACCAAATGACAGAGTCTTCAGCTaGCCCTTCAGGAGCTCAAAGGAGGGACACATTGCT +
Preference number: 6 (lower is better)
Translates to: LGLHQPNDRVFS*PFRSSKEGHIA
Trigger: AGCAATGTGTCCCTCCTTTGAGCTCCTGAAGGGCCAGCTGAAGACTCTGTCATTTGGTTGGTGGAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585404.5
CDS CAA 72 bp GCCATCTGTGTCTGTGTTCTGGATAGGAGAGGTTGCTaGCAGGCTGGTCTCTGGGTAAGCAGAGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: AICVCVLDRRGC*QAGLWVSRVSL
Trigger: CAGTGACACTCTGCTTACCCAGAGACCAGCCTGCAAGCAACCTCTCCTATCCAGAACACAGACACAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CCA 72 bp TTCTCTGTGAGATGGTCTGTCTTGGAAGGGCTTTGGTaGCAGCTGATGTCCTGGGGGTCAGGCAAGTTTTCT +
Preference number: 6 (lower is better)
Translates to: FSVRWSVLEGLW*QLMSWGSGKFS
Trigger: AGAAAACTTGCCTGACCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGACAGACCATCTCACAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535628.6
ENST00000586438.5
ENST00000588982.5
ENST00000590800.6
CDS CAA 72 bp TTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCAAGCACCGATGC +
Preference number: 6 (lower is better)
Translates to: LGKGMPMSSSMS*AMFSARAKHRC
Trigger: GCATCGGTGCTTGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586047.5
ENST00000588566.5
ENST00000590800.6
ENST00000591279.5
ENST00000591405.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCAACCCTTCATTTTACAGAGG +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARAQPFILQR
Trigger: CCTCTGTAAAATGAAGGGTTGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586438.5
ENST00000586525.5
ENST00000587107.5
ENST00000590178.5
ENST00000590855.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCAAGCACCGATGCCTTAGTTTT +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARAKHRCLSF
Trigger: AAAACTAAGGCATCGGTGCTTGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586047.5
ENST00000590800.6
ENST00000591279.5
ENST00000591405.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCTGGCTTTAACACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARALALTLLH
Trigger: ATGGAGAAGTGTTAAAGCCAGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586743.5
ENST00000589619.5
CDS GCA 72 bp GGCCTCATCAGCACCTGCTCTAGTCCTTGTTGTAACTaGTGGGACACCTTTGAAGACAAAGCCTTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: GLISTCSSPCCN*WDTFEDKAFPS
Trigger: AGAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS CCA 72 bp ATTGACAGGCCAGCACTCCTCTTGAAGACAAGGGTCTaGAGACAGAAGCTTTCATGTCACCTATGCCATGCC +
Preference number: 6 (lower is better)
Translates to: IDRPALLLKTRV*RQKLSCHLCHA
Trigger: GGCATGGCATAGGTGACATGAAAGCTTCTGTCTCCAGACCCTTGTCTTCAAGAGGAGTGCTGGCCTGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS CAA 72 bp TTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCACGGTAATCAG +
Preference number: 6 (lower is better)
Translates to: LGKGMPMSSSMS*AMFSARAHGNQ
Trigger: CTGATTACCGTGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589077.5
CDS CAA 90 bp CATTTTACAGAGGAGGAAATTTGCAGTCCAGGAAGGGGAGGGTTCTaGTCCAAGGTCACAAAGCAATTTAGAGGAGAGCTCCCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: HFTEEEICSPGRGGF*SKVTKQFRGELPAS
Trigger: GGAGGCTGGGAGCTCTCCTCTAAATTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCCTGGACTGCAAATTTCCTCCTCTGTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000586438.5
ENST00000586525.5
ENST00000586743.5
ENST00000587107.5
ENST00000588053.5
ENST00000588982.5
ENST00000589170.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590437.5
ENST00000590855.5
ENST00000591526.5
ENST00000592387.5
ENST00000592656.5
ENST00000593159.5
CDS GCA 72 bp GCCCTGCTGGGTGACCTTGGGCAAGTGACTTCTCTATaGCTCAGTTGTTGCATCAACCCTTCATTTTACAGA +
Preference number: 6 (lower is better)
Translates to: ALLGDLGQVTSL*LSCCINPSFYR
Trigger: TCTGTAAAATGAAGGGTTGATGCAACAACTGAGGCATAGAGAAGTCACTTGCCCAAGGTCACCCAGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588053.5
ENST00000588982.5
ENST00000591526.5
ENST00000592387.5
ENST00000592656.5
CDS GCA 72 bp GCAAGGACTGTACTCTGCTCAGATCTCATCGAGAGGTaGTGGATCCCAGCCTTTCCAGCTCATTTTCCAATT +
Preference number: 6 (lower is better)
Translates to: ARTVLCSDLIER*WIPAFPAHFPI
Trigger: AATTGGAAAATGAGCTGGAAAGGCTGGGATCCAGCACCTCTCGATGAGATCTGAGCAGAGTACAGTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591279.5
CDS CCA 72 bp ATTGACAGGCCAGCACTCCTCTTGAAGACAAGGGTCTaGAGACAGAAGCTTTCATGTCACCTATGCCATGCA +
Preference number: 6 (lower is better)
Translates to: IDRPALLLKTRV*RQKLSCHLCHA
Trigger: TGCATGGCATAGGTGACATGAAAGCTTCTGTCTCCAGACCCTTGTCTTCAAGAGGAGTGCTGGCCTGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589077.5
CDS CCA 72 bp CTTCTCGTGGATTTCCCAGAGCTTCCAGGTGCTGCCTaGCACAAGCACCGATGCCTTAGTTTTAAATTTCAG +
Preference number: 6 (lower is better)
Translates to: LLVDFPELPGAA*HKHRCLSFKFQ
Trigger: CTGAAATTTAAAACTAAGGCATCGGTGCTTGTGCCAGGCAGCACCTGGAAGCTCTGGGAAATCCACGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS CAA 72 bp GAGGAGGAAATTTGCAGTCCAGGAAGGGGAGGGTTCTaGTCCAAGGTCACAAAGCAATTTAGAGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: EEEICSPGRGGF*SKVTKQFRGEL
Trigger: GAGCTCTCCTCTAAATTGCTTTGTGACCTTGGACAAGAACCCTCCCCTTCCTGGACTGCAAATTTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000586438.5
ENST00000586525.5
ENST00000586743.5
ENST00000587107.5
ENST00000588053.5
ENST00000588982.5
ENST00000589170.5
ENST00000589619.5
ENST00000590178.5
ENST00000590374.5
ENST00000590437.5
ENST00000590855.5
ENST00000591526.5
ENST00000592387.5
ENST00000592656.5
ENST00000593159.5
CDS CAA 72 bp TTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCAACCCTTCATT +
Preference number: 6 (lower is better)
Translates to: LGKGMPMSSSMS*AMFSARAQPFI
Trigger: AATGAAGGGTTGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586438.5
ENST00000586525.5
ENST00000587107.5
ENST00000589170.5
ENST00000590178.5
ENST00000590374.5
ENST00000590855.5
CDS CAA 72 bp TTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCTGGTCATAAAG +
Preference number: 6 (lower is better)
Translates to: LGKGMPMSSSMS*AMFSARALVIK
Trigger: CTTTATGACCAGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588149.5
CDS CAA 90 bp CTGCTGTGGTTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCTGTTCATATTTCAGATGGAA +
Preference number: 6 (lower is better)
Translates to: LLWLGKGMPMSSSMS*AMFSARALFIFQME
Trigger: TTCCATCTGAAATATGAACAGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAACCACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS GCA 72 bp CCAGAGCTTCCAGGTGCTGCCTGGCACAAGCACCGATaGCTTAGTTTTAAATTTCAGGACACCAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PELPGAAWHKHR*LSFKFQDTSFS
Trigger: AGAAAAACTGGTGTCCTGAAATTTAAAACTAAGGCATCGGTGCTTGTGCCAGGCAGCACCTGGAAGCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS CCA 72 bp CTCATCAGCACCTGCTCTAGTCCTTGTTGTAACTGCTaGGACACCTTTGAAGACAAAGCCTTTCCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LISTCSSPCCNC*DTFEDKAFPSV
Trigger: AACAGAGGGAAAGGCTTTGTCTTCAAAGGTGTCCCAGCAGTTACAACAAGGACTAGAGCAGGTGCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586438.5
ENST00000588982.5
CDS CAA 72 bp TTGGGGAAGGGAATGCCAATGAGCTCATCAATGTCATaGGCCATGTTCTCAGCCAGAGCCCTGTTCATATTT +
Preference number: 6 (lower is better)
Translates to: LGKGMPMSSSMS*AMFSARALFIF
Trigger: AAATATGAACAGGGCTCTGGCTGAGAACATGGCCAATGACATTGATGAGCTCATTGGCATTCCCTTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS GCA 72 bp CTTGGTTATTTATTAAAAGATTCCAAGGTGCCAAATTaGAGGTTGCAGGGGGTGCTGCATCCTTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LGYLLKDSKVPN*RLQGVLHPFWA
Trigger: TGCCCAGAAAGGATGCAGCACCCCCTGCAACCTGCAATTTGGCACCTTGGAATCTTTTAATAAATAACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588028.1
ENST00000589170.5
CDS GCA 72 bp GGTCTGGAGACAGAAGCTTTCATGTCACCTATGCCATaGCTGGTCATAAAGTTCTTTGTCTCATATGCAGGT +
Preference number: 6 (lower is better)
Translates to: GLETEAFMSPMP*LVIKFFVSYAG
Trigger: ACCTGCATATGAGACAAAGAACTTTATGACCAGGCATGGCATAGGTGACATGAAAGCTTCTGTCTCCAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589194.5
CDS TCA 72 bp AAGTTCTTTGTCTCATATGCAGGTGTCTTCTCTTCCTaGACTGGACTGAAAGCTCCTCCAAAACAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: KFFVSYAGVFSS*TGLKAPPKQSQ
Trigger: TTGGCTCTGTTTTGGAGGAGCTTTCAGTCCAGTTCAGGAAGAGAAGACACCTGCATATGAGACAAAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587107.5
ENST00000588149.5
ENST00000589194.5
ENST00000590374.5
ENST00000592656.5
CDS GCA 72 bp CCTGGGCAACAGAACGAGACCCTTTCTAAGCACCGATaGCTTAGTTTTAAATTTCAGGACACCAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PGQQNETLSKHR*LSFKFQDTSFS
Trigger: AGAAAAACTGGTGTCCTGAAATTTAAAACTAAGGCATCGGTGCTTAGAAAGGGTCTCGTTCTGTTGCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588028.1
CDS CCA 72 bp TCTGCAAATCTGCTCATTTCTATTAGCCAGAAGAACTaGGAGACTGCGTTACAAAGCACTACTGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: SANLLISISQKN*ETALQSTTGFG
Trigger: TCCAAAGCCAGTAGTGCTTTGTAACGCAGTCTCCCAGTTCTTCTGGCTAATAGAAATGAGCAGATTTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CAA 90 bp TTGGACTCAACCCAGGGGTTGAAACATGTTTTTAGCTGTGTGGTTTaGGGAAAGTTTATCCACCTTCCTGACCTTCCATTTCTTCATAGC +
Preference number: 6 (lower is better)
Translates to: LDSTQGLKHVFSCVV*GKFIHLPDLPFLHS
Trigger: GCTATGAAGAAATGGAAGGTCAGGAAGGTGGATAAACTTTCCCAAAACCACACAGCTAAAAACATGTTTCAACCCCTGGGTTGAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589170.5
CDS CCA 72 bp AGAAATCTTAAAGCTGCTGAGAAGGACAAAACAGCTTaGGTCCACTGTAGGAATGTTCTGCAGTGCAAAAGA +
Preference number: 6 (lower is better)
Translates to: RNLKAAEKDKTA*VHCRNVLQCKR
Trigger: TCTTTTGCACTGCAGAACATTCCTACAGTGGACCCAAGCTGTTTTGTCCTTCTCAGCAGCTTTAAGATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586047.5
CDS CAA 72 bp ACCCAGGGGTTGAAACATGTTTTTAGCTGTGTGGTTTaGGGAAAGTTTATCCACCTTCCTGACCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: TQGLKHVFSCVV*GKFIHLPDLPF
Trigger: AAATGGAAGGTCAGGAAGGTGGATAAACTTTCCCAAAACCACACAGCTAAAAACATGTTTCAACCCCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589170.5