RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB7B (Homo sapiens)

Ensembl gene IDs: ENSG00000160685

Ensembl transcript IDs: ENST00000292176.2, ENST00000368426.3, ENST00000417934.6, ENST00000461530.1, ENST00000483226.1, ENST00000487542.1, ENST00000535420.5

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAGGAGAAGAGGGTAGGACGCCGCCCGGCCCGCCCTGCCCTCTaGCCCCGGGGAGGGAGCGGCGGGAACAAGACATTCCCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: EEEKRVGRRPARPAL*PRGGSGGNKTFPAQ
Trigger: CTGGGCAGGGAATGTCTTGTTCCCGCCGCTCCCTCCCCGGGGCCAGAGGGCAGGGCGGGCCGGGCGGCGTCCTACCCTCTTCTCCTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR CCA 90 bp CCAGACCCCTGCTGTGTCTGTCCTGCGTGCTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCT +
Preference number: 1 (lower is better)
Translates to: PDPCCVCPACSHCLA*VSPALCCFSLALVP
Trigger: AGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAGACACAGCAGGGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR GCA 90 bp GAAGGGCTGATGCTGATGCCAGCAAGGCTCCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCC +
Preference number: 1 (lower is better)
Translates to: EGLMLMPARLRAPDP*CVCPACSHCLAWVS
Trigger: GGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAGACACAGCAGGGGTCTGGGGCACGGAGCCTTGCTGGCATCAGCATCAGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAGGCGGGGCAAGGCTTTaGTCCCAAGCCCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: RSPTQSMAARWRRLARSPGGARL*SQAPTP
Trigger: GGGGGTGGGGGCTTGGGACCAAAGCCTTGCCCCGCC...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCGCTCCGGCTCGCACCTaGGCGGGGAGGAGATGGGGA +
Preference number: 2 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLAPART*AGRRWG
Trigger: TCCCCATCTCCTCCCCGCCCAGGTGCGAGCCGGAGC...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGGCTCCGGCTCGCACCTaGGCGGGGAGGAGATGGGGA +
Preference number: 2 (lower is better)
Translates to: VRSPFPCGQARSSVPTALAPART*AGRRWG
Trigger: TCCCCATCTCCTCCCCGCCCAGGTGCGAGCCGGAGC...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLRAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 2 (lower is better)
Translates to: GARPLRAWPPDGAGSPALGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: VRSPFPCGQARSSVPTALRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCGCTCCGGCTCGCACCTaGGCGGGGAGGAGATGGGGA +
Preference number: 2 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRAPART*AGRRWG
Trigger: TCCCCATCTCCTCCCCGCCCAGGTGCGAGCCGGAGC...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCTGTGCCCACTGCCTTaGCAAGGGGGCGCCGCTCAC +
Preference number: 2 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPLCPLP*QGGAAH
Trigger: GTGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: VRSPFPCGQARSSVPTALVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCTTTGCCGGCCCCCTTTaGATAATTCACTGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: GARPLRAWPPDGAGSPALFAGPL*IIHCQE
Trigger: TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAA...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAARAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTCTCCCCAGGAGCAGCTaGGGACAGGGACCCCACTTT +
Preference number: 2 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSLPRSS*GQGPHF
Trigger: AAAGTGGGGTCCCTGTCCCCAGCTGCTCCTGGGGAG...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR TCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTTCTCCACGACCCCATaGCTCAGCGCCGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRFSTTP*LSAGSR
Trigger: CCTGCTCCCGGCGCTGAGTCATGGGGTCGTGGAGAA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTCCCCGGCCTTGTGCTaGTTCAGTCTGGCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAASPALC*FSLALV
Trigger: GACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCGAACAAGACATTCCCTaGCCAGGGCCGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAEQDIP*PGPWGG
Trigger: CCCTCCCCACGGCCCTGGGCAGGGAATGTCTTGTTC...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 2 (lower is better)
Translates to: RSPTQSMAARWRRLARSPNLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQERAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCAATACCTTCTTAGCTTaGAATTGGAATGAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: GARPLRAWPPDGAGSPALNTFLA*NWNEGS
Trigger: AGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTTTCAAGCTTCCACCTaGCTTTCCCCCACCTACCCT +
Preference number: 2 (lower is better)
Translates to: VRSPFPCGQARSSVPTALFQAST*LSPTYP
Trigger: AGGGTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCTCACCAGCTGGGGTaGATGAGGAGCGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAAHQLG*MRSVKT
Trigger: TGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAAAGCGAGAAGTTCTGTaGCCACTGCCTTGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAKREVL*PLPWQG
Trigger: CCCTTGCCAAGGCAGTGGGCACAGAACTTCTCGCTT...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGGGGATTATTCTCCCCTaGCTGACAGGAAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREGIILP*LTGSPA
Trigger: AGCCGGGCTTCCTGTCAGGCAGGGGAGAATAATCCC...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCCTGCGTGCTCCCACTaGTTGGCATGGGTGTCCCCG +
Preference number: 2 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGPACSH*LAWVSP
Trigger: CGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGAAGCGAGAAGTTCTGTaGCCACTGCCTTGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREKREVL*PLPWQG
Trigger: CCCTTGCCAAGGCAGTGGGCACAGAACTTCTCGCTT...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTTTCAAGCTTCCACCTaGCTTTCCCCCACCTACCCT +
Preference number: 2 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRFQAST*LSPTYP
Trigger: AGGGTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTGTGTCTGTCCTGCGTaGTCCCACTGCTTGGCATGG +
Preference number: 2 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGCVCPA*SHCLAW
Trigger: CCATGCCAAGCAGTGGGAGCACGCAGGACAGACACA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 2 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRENLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACGCCCACTCAGAGCATaGCCGCCAGATGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRRPLRA*PPDGAG
Trigger: GCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 2 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYNLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTTTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACTGTGCCCACTGCCTTaGCAAGGGGGCGCCGCTCAC +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRLCPLP*QGGAAH
Trigger: GTGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR TCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGATTCTCCACGACCCCATaGCTCAGCGCCGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRFSTTP*LSAGSR
Trigger: CCTGCTCCCGGCGCTGAGTCATGGGGTCGTGGAGAA...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTTAGAAATACATTATTaGTTCTACTCCCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRLEIHY*FYSPGA
Trigger: TGCTCCTGGGGAGTAGAAGCAATAATGTATTTCTAA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCATTAGAAATACATTATTaGTTCTACTCCCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSALEIHY*FYSPGA
Trigger: TGCTCCTGGGGAGTAGAAGCAATAATGTATTTCTAA...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACGCAGCCCCTTCCCCTaGGGCCAAGCGAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRRSPFP*GQARSS
Trigger: AGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACTCCCCAGGAGCAGCTaGGGACAGGGACCCCACTTT +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRLPRSS*GQGPHF
Trigger: AAAGTGGGGTCCCTGTCCCCAGCTGCTCCTGGGGAG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACACCTACCCTTCCTTTaGCGGCCCCCTTTGCATAAT +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRHLPFL*RPPLHN
Trigger: ATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGATTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAATACCTTCTTAGCTTaGAATTGGAATGAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRNTFLA*NWNEGS
Trigger: AGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR GCA 72 bp GGAGGAGAAGAGGGTAGGACGCCGCCCGGCCCGCCCTaGCCTCTGGCCCCGGGGAGGGAGCGGCGGGAACAA +
Preference number: 3 (lower is better)
Translates to: GGEEGRTPPGPP*PLAPGRERREQ
Trigger: TTGTTCCCGCCGCTCCCTCCCCGGGGCCAGAGGGCAGGGCGGGCCGGGCGGCGTCCTACCCTCTTCTCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR CCA 72 bp CTGCCTTGGCAAGGGGGCGCCGCTCACCAGCTGGGGTaGATGAGGAGCGTGAAGACAGCTCGCTCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: LPWQGGAAHQLG*MRSVKTARSSG
Trigger: GCCACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCTTGCCAAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: VRSPFPCGQARSSVPTALWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCGCGTGCTCCCACTGCTaGGCATGGGTGTCCCCGGCC +
Preference number: 3 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRACSHC*AWVSPA
Trigger: GGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGCGTGCTCCCACTGCTaGGCATGGGTGTCCCCGGCC +
Preference number: 3 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPACSHC*AWVSPA
Trigger: GGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTCTGTGCCCACTGCCTaGGCAAGGGGGCGCCGCTCA +
Preference number: 3 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRESVPTA*ARGRRS
Trigger: TGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAGA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR GCA 72 bp GGGATCACTTTCCCACAGGTCCGCAGCCCCTTCCCCTaGGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GITFPQVRSPFP*GQARSSVPTAL
Trigger: CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGACCTGTGGGAAAGTGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCATATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 3 (lower is better)
Translates to: RSPTQSMAARWRRLARSPYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR TCA 72 bp ATCCTAAGAGCAGAGTGGGGATTATTCTCCCCTGCCTaGCAGGAAGCCCGGCTGGCAAGGATCTGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: ILRAEWGLFSPA*QEARLARIWEG
Trigger: CCCTTCCCAGATCCTTGCCAGCCGGGCTTCCTGTCAGGCAGGGGAGAATAATCCCCACTCTGCTCTTAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
3UTR-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGATATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 3 (lower is better)
Translates to: KALVPSPHPLETRIAEVGYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGGGGGCTTGGGGCCCTaGTCCGGTCCTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALGGLGP*SGPVLL
Trigger: CAGCAGGACAGGACCGGAGCAGGGCCCCAAGCCCCC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368426.3
CDS-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAACACACACCGGCCCCTaGTCCCCCAGTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPTHTGP*SPSGRP
Trigger: GGGACGGCCACTGGGGGAGCAGGGGCCGGTGTGTGT...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCAGCCGTCGGGTCCGCTaGCTGGAGCTGCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALSRRVR*LELLRL
Trigger: GAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCAAGCTTTCCGGGGCTTaGGGCTGCGGCGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALKLSGA*GCGGQQ
Trigger: CTGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGCTGGCGCTGCTCATTaGGGCAGCTCAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALAGAAH*GSSGAH
Trigger: GTGAGCTCCTGAGCTGCCTCAATGAGCAGCGCCAGC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGCTGTCCAGGCCTGGTaGCAGGTTGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALAVQAW*QVVLVQ
Trigger: CTGCACCAGGACAACCTGGCACCAGGCCTGGACAGC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCACCTGCGTGCTCCCACTaGTTGGCATGGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPPACSH*LAWVSP
Trigger: CGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGG...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCACGCAGCCCCTTCCCCTaGGGCCAAGCGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPRSPFP*GQARSS
Trigger: AGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCG...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAAGGTGGCGCTGCAGGTaGTCCTCCTTGGCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPRWRCR*SSLAKA
Trigger: GGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCT...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCATTGTCCCCACTTTCTaGGGCTGGGCCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALIVPTF*GWAPGL
Trigger: GAGACCTGGGGCCCAGCCCCAGAAAGTGGGGACAAT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCATTATTCTCCCCTGCCTaGCAGGAAGCCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPLFSPA*QEARLA
Trigger: TGCCAGCCGGGCTTCCTGTCAGGCAGGGGAGAATAA...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCACTGGCATGTTGGCGCTaGTGGTGGTCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPLACWR*WWSVWL
Trigger: CAGCCACACTGACCACCAGCAGCGCCAACATGCCAG...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTCCGGGGCTTGCGGCTaGGGCGGGCAACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLSGACG*GGQQAE
Trigger: CTCGGCCTGTTGCCCGCCGCAGCCGCAAGCCCCGGA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAGCTAGCACAGCCCTGTaGGTGCGGTATTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPASTAL*VRYSRP
Trigger: GGGCCTTGAATACCGCACCCACAGGGCTGTGCTAGC...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCGGTGGCGGAGGTGGTaGGAGGGGCACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLRWRRW*EGHLWR
Trigger: CCTCCACAGGTGCCCCTCCCACCACCTCCGCCACCG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAAGCGGTAGAGGGTGGTaGGTAGTGGGGTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPSGRGW*VVGWCI
Trigger: GATGCACCACCCCACTACCCACCACCCTCTACCGCT...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCACTGAGGCTCACAGTGTaGGAAGAAGCGCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPLRLTV*EEARPP
Trigger: TGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAG...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTAGCATGGCCGCCAGATaGCGCCGGCTCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSMAAR*RRLARS
Trigger: AGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCTGTGCCCACTGCCTTaGCAAGGGGGCGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLLCPLP*QGGAAH
Trigger: GTGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAG...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGACAGGGCACTCCTaGGGCATCTGGGAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLQTGHS*GIWERR
Trigger: ACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCTG...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGGGGCCCAGTGGGGGCTaGCTGCTCCCAGAATCGAGC +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALGPSGG*LLPESS
Trigger: GCTCGATTCTGGGAGCAGTCAGCCCCCACTGGGCCC...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCAGCTTGGAATTGGAATaGGGGCTCTGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALSLELE*GLWEEG
Trigger: CCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGACACACACCGGCCCCTaGTCCCCCAGTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWTHTGP*SPSGRP
Trigger: GGGACGGCCACTGGGGGAGCAGGGGCCGGTGTGTGT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCAAGCTTTCCGGGGCTTaGGGCTGCGGCGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLKLSGA*GCGGQQ
Trigger: CTGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTT...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCCCACTGCCCCCACTaGTGCCCACTCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLAHCPH*CPLCPP
Trigger: TGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCGCCCACTGCCCCCACTaGTGCCCACTCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAAHCPH*CPLCPP
Trigger: TGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGC...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTGCGGCGCCGTCGGGTaGGCACCTCCAGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLCGAVG*APPGSS
Trigger: AGAACTGCCTGGAGGTGCGCACCCGACGGCGCCGCA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTGCGAGGGGAGTTGGCTaGTTCCCGGTGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSARGVG*FPVLWG
Trigger: CCCCCACAGCACCGGGAAGCAGCCAACTCCCCTCGC...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGCATGTTGGCGCTGCTaGTGGTCAGTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALACWRC*WSVWLY
Trigger: ATACAGCCACACTGACCACCAGCAGCGCCAACATGC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCCGGTGGCGGAGGTGGTaGGAGGGGCACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALRWRRW*EGHLWR
Trigger: CCTCCACAGGTGCCCCTCCCACCACCTCCGCCACCG...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCGGTGGCGGAGGTGGTaGGAGGGGCACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPRWRRW*EGHLWR
Trigger: CCTCCACAGGTGCCCCTCCCACCACCTCCGCCACCG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GARPLRAWPPDGAGSPALLGGLL*PPWFAG
Trigger: TCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAG...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGAGACCGGGGGCCCAGTaGGGGCTGACTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALRPGAQ*GLTAPR
Trigger: TCTGGGAGCAGTCAGCCCCCACTGGGCCCCCGGTCT...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCGGCGGGGCAAGGCTTTaGTCCCAAGCCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAGGARL*SQAPTP
Trigger: GGGGGTGGGGGCTTGGGACCAAAGCCTTGCCCCGCC...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCTCCGGCTCGCACCTaGGCGGGGAGGAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLAPART*AGRRWG
Trigger: TCCCCATCTCCTCCCCGCCCAGGTGCGAGCCGGAGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCAGCATGGCCGCCAGATaGCGCCGGCTCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAASMAAR*RRLARS
Trigger: AGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCT...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCGCCCACTCAGAGCATaGCCGCCAGATGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFRPLRA*PPDGAG
Trigger: GCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCG...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCTGTGCCCACTGCCTTaGCAAGGGGGCGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLLCPLP*QGGAAH
Trigger: GTGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGGCCCTGCTCCGGTCCTaGTCAGAAGGCCGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALALLRS*SEGRGQ
Trigger: CTGACCGCGGCCTTCTGACCAGGACCGGAGCAGGGC...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGGGCCCAGTGGGGGCTaGCTGCTCCCAGAATCGAGC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLGPSGG*LLPESS
Trigger: GCTCGATTCTGGGAGCAGTCAGCCCCCACTGGGCCC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGGGCCCAGTGGGGGCTaGCTGCTCCCAGAATCGAGC +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWGPSGG*LLPESS
Trigger: GCTCGATTCTGGGAGCAGTCAGCCCCCACTGGGCCC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAAGCTTGGAATTGGAATaGGGGCTCTGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPSLELE*GLWEEG
Trigger: CCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCT...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTTCTCCACGACCCCATaGCTCAGCGCCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSFSTTP*LSAGSR
Trigger: CCTGCTCCCGGCGCTGAGTCATGGGGTCGTGGAGAA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCGCACAGCCCTGTGGGTaGGGTATTCAAGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLAQPCG*GIQGPA
Trigger: CGCAGGGCCTTGAATACCGCACCCACAGGGCTGTGC...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCACACACACCGGCCCCTaGTCCCCCAGTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRTHTGP*SPSGRP
Trigger: GGGACGGCCACTGGGGGAGCAGGGGCCGGTGTGTGT...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTCCGGGGCTTGCGGCTaGGGCGGGCAACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRESGACG*GGQQAE
Trigger: CTCGGCCTGTTGCCCGCCGCAGCCGCAAGCCCCGGA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTGCGGCGCCGTCGGGTaGGCACCTCCAGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWCGAVG*APPGSS
Trigger: AGAACTGCCTGGAGGTGCGCACCCGACGGCGCCGCA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTGGTGCATCGTCCTTaGGGCGCCGTCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLVVHRP*GAVGCA
Trigger: TGCGCACCCGACGGCGCCGCAAGGACGATGCACCAC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTGTGGTGCATCGTCCTTaGGGCGCCGTCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPVVHRP*GAVGCA
Trigger: TGCGCACCCGACGGCGCCGCAAGGACGATGCACCAC...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGTGGTGCATCGTCCTTaGGGCGCCGTCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWVVHRP*GAVGCA
Trigger: TGCGCACCCGACGGCGCCGCAAGGACGATGCACCAC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTAAGGCCGCGGTCAGTTaGTCGCCGCTCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPKAAVS*SPLAAG
Trigger: CCCAGCAGCGAGCGGCGAGCAACTGACCGCGGCCTT...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGGGGGCTTGGGGCCCTaGTCCGGTCCTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFGGLGP*SGPGQK
Trigger: CTTCTGACCAGGACCGGAGCAGGGCCCCAAGCCCCC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCAGCATGTTGGCGCTGCTaGTGGTCAGTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPACWRC*WSVWLY
Trigger: ATACAGCCACACTGACCACCAGCAGCGCCAACATGC...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGAGACCGGGGGCCCAGTaGGGGCTGACTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWRPGAQ*GLTAPR
Trigger: TCTGGGAGCAGTCAGCCCCCACTGGGCCCCCGGTCT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLRAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGAGCCGTCGGGTCCGCTaGCTGGAGCTGCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLSRRVR*LELLRL
Trigger: GAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCT...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCAGCCGTCGGGTCCGCTaGCTGGAGCTGCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAASRRVR*LELLRL
Trigger: GAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCT...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCGGCGGGGCAAGGCTTTaGTCCCAAGCCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRGGARL*SQAPTP
Trigger: GGGGGTGGGGGCTTGGGACCAAAGCCTTGCCCCGCC...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCGCTGGCGCTGCTCATTaGGGCAGCTCAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLAGAAH*GSSGAH
Trigger: GTGAGCTCCTGAGCTGCCTCAATGAGCAGCGCCAGC...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCAGACAGGGCACTCCTaGGGCATCTGGGAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPQTGHS*GIWERR
Trigger: ACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCTG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTTCTCCACGACCCCATaGCTCAGCGCCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLFSTTP*LSAGSR
Trigger: CCTGCTCCCGGCGCTGAGTCATGGGGTCGTGGAGAA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTTCTCCACGACCCCATaGCTCAGCGCCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPFSTTP*LSAGSR
Trigger: CCTGCTCCCGGCGCTGAGTCATGGGGTCGTGGAGAA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTCTGGGAGCGGCGTTTaGGCACCAGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLSGSGV*APACLG
Trigger: GCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCCTTTGAGGTGGCGCTaGAGGTGGTCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLPLRWR*RWSSLA
Trigger: CGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCATGCGGCGCCGTCGGGTaGGCACCTCCAGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSACGAVG*APPGSS
Trigger: AGAACTGCCTGGAGGTGCGCACCCGACGGCGCCGCA...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGTGGTGCATCGTCCTTaGGGCGCCGTCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAVVHRP*GAVGCA
Trigger: TGCGCACCCGACGGCGCCGCAAGGACGATGCACCAC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGGGTAGTGGGGTGGTaGATCGTCCTTGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFWVVGW*IVLAAP
Trigger: CGGCGCCGCAAGGACGATGCACCACCCCACTACCCA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTCCCCGGCCTTGTGCTaGTTCAGTCTGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSPALC*FSLALV
Trigger: GACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCCTGCGTGCTCCCACTaGTTGGCATGGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFPACSH*LAWVSP
Trigger: CGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGG...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCTGCGTGCTCCCACTaGTTGGCATGGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWPACSH*LAWVSP
Trigger: CGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCGGGGGCTTGGGGCCCTaGTCCGGTCCTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRGGLGP*SGPGQK
Trigger: CTTCTGACCAGGACCGGAGCAGGGCCCCAAGCCCCC...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCGGGAGGCAGTTCCTGTaGGAGGGCTGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLGRQFL*EGCSCP
Trigger: GGGACAGCTACAGCCCTCCCACAGGAACTGCCTCCC...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLWWVVG*CIVLAA
Trigger: CGCCGCAAGGACGATGCACCACCCCACTACCCACCA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCAGCAGCGGTAGAGGGTaGTGGGTAGTGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLSSGRG*WVVGWC
Trigger: GCACCACCCCACTACCCACCACCCTCTACCGCTGCT...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGACCGGGGGCCCAGTaGGGGCTGACTGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRRPGAQ*GLTAPR
Trigger: TCTGGGAGCAGTCAGCCCCCACTGGGCCCCCGGTCT...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWRAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCTGAGGCTCACAGTGTaGGAAGAAGCGCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLLRLTV*EEARPP
Trigger: TGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAG...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGGGCGGGGCAAGGCTTTaGTCCCAAGCCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREGGARL*SQAPTP
Trigger: GGGGGTGGGGGCTTGGGACCAAAGCCTTGCCCCGCC...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCATTTCAAGCTTCCACCTaGCTTTCCCCCACCTACCCT +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPFQAST*LSPTYP
Trigger: AGGGTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAA...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGCTGGCGCTGCTCATTaGGGCAGCTCAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALAGAAH*GSSGAH
Trigger: GTGAGCTCCTGAGCTGCCTCAATGAGCAGCGCCAGC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCTGGCGCTGCTCATTaGGGCAGCTCAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLAGAAH*GSSGAH
Trigger: GTGAGCTCCTGAGCTGCCTCAATGAGCAGCGCCAGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCTGCGTCCGGATGGTaGGGTCACATAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWPASGW*GHIGGP
Trigger: TGGGCCACCTATGTGACCTCACCATCCGGACGCAGG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCCTGCGTCCGGATGGTaGGGTCACATAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPPASGW*GHIGGP
Trigger: TGGGCCACCTATGTGACCTCACCATCCGGACGCAGG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCCCTGCGTCCGGATGGTaGGGTCACATAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALPASGW*GHIGGP
Trigger: TGGGCCACCTATGTGACCTCACCATCCGGACGCAGG...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGCAGTTCTGGCCTTTaGGGTGGCGCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLGSSGL*GGAAGG
Trigger: ACCACCTGCAGCGCCACCTCAAAGGCCAGAACTGCC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGGCCCAGCTGGCGCTaGTCATTGAGGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFWPSWR*SLRQLR
Trigger: CCTGAGCTGCCTCAATGAGCAGCGCCAGCTGGGCCA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGCACAGCCCTGTGGGTaGGGTATTCAAGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWAQPCG*GIQGPA
Trigger: CGCAGGGCCTTGAATACCGCACCCACAGGGCTGTGC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCACAGCCCTGTGGGTaGGGTATTCAAGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLAQPCG*GIQGPA
Trigger: CGCAGGGCCTTGAATACCGCACCCACAGGGCTGTGC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGCCCACTGCCCCCACTaGTGCCCACTCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYAHCPH*CPLCPP
Trigger: TGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGCTGTCCAGGCCTGGTaGCAGGTTGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALAVQAW*QVVLVQ
Trigger: CTGCACCAGGACAACCTGGCACCAGGCCTGGACAGC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCGCTGTCCAGGCCTGGTaGCAGGTTGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAAVQAW*QVVLVQ
Trigger: CTGCACCAGGACAACCTGGCACCAGGCCTGGACAGC...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTCTGGGAGCGGCGTTTaGGCACCAGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLSGSGV*APACLG
Trigger: GCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTCTGGGAGCGGCGTTTaGGCACCAGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSGSGV*APACLG
Trigger: GCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCTTTGAGGTGGCGCTaGAGGTGGTCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLPLRWR*RWSSLA
Trigger: CGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTGCGGCGCCGTCGGGTaGGCACCTCCAGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRECGAVG*APPGSS
Trigger: AGAACTGCCTGGAGGTGCGCACCCGACGGCGCCGCA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTGGGTAGTGGGGTGGTaGATCGTCCTTGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRWVVGW*IVLAAP
Trigger: CGGCGCCGCAAGGACGATGCACCACCCCACTACCCA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTGTGTCTGTCCTGCGTaGTCCCACTGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLCVCPA*SHCLAW
Trigger: CCATGCCAAGCAGTGGGAGCACGCAGGACAGACACA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGAACAAGACATTCCCTaGCCAGGGCCGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLEQDIP*PGPWGG
Trigger: CCCTCCCCACGGCCCTGGGCAGGGAATGTCTTGTTC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGAACAAGACATTCCCTaGCCAGGGCCGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALEQDIP*PGPWGG
Trigger: CCCTCCCCACGGCCCTGGGCAGGGAATGTCTTGTTC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCGCAGCCCCTTCCCCTaGGGCCAAGCGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAARSPFP*GQARSS
Trigger: AGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCG...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCGGGATTATTCTCCCCTaGCTGACAGGAAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLGIILP*LTGSPA
Trigger: AGCCGGGCTTCCTGTCAGGCAGGGGAGAATAATCCC...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCATAGGTGGCCCAGCTaGCGCTGCTCATTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLHRWPS*RCSLRQ
Trigger: CTGCCTCAATGAGCAGCGCCAGCTGGGCCACCTATG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCGTGAGGTCACATAGGTaGCCCAGCTGGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLVRSHR*PSWRCS
Trigger: TGAGCAGCGCCAGCTGGGCCACCTATGTGACCTCAC...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCAGCCTGGAGCACAGCTaGCATGTTGGCGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLSLEHS*HVGAAG
Trigger: ACCAGCAGCGCCAACATGCCAGCTGTGCTCCAGGCT...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGAGCCTGGAGCACAGCTaGCATGTTGGCGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALSLEHS*HVGAAG
Trigger: ACCAGCAGCGCCAACATGCCAGCTGTGCTCCAGGCT...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLHPRPG*ELLAHC
Trigger: GCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGCATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLHPRPG*ELLAHC
Trigger: GCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATG...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGT +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALDGRAL*APQGLG
Trigger: ACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGT +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLDGRAL*APQGLG
Trigger: ACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCGCCAGCCCATAGGCTaGGGGATATACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLRQPIG*GIYQLL
Trigger: GAGGAGCTGGTATATCCCCCAGCCTATGGGCTGGCG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTTGGCTGTCCAGGCCTaGTGCCAGGTTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSLAVQA*CQVVLV
Trigger: CACCAGGACAACCTGGCACCAGGCCTGGACAGCCAA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTTCTGGCCTTTGAGGTaGCGCTGCAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLFWPLR*RCRWSS
Trigger: GGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTAGCAGCGGTAGAGGGTaGTGGGTAGTGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLSSGRG*WVVGWC
Trigger: GCACCACCCCACTACCCACCACCCTCTACCGCTGCT...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLRKVSR*PLERSR
Trigger: CCTCGACCTCTCCAATGGCCACCTGGACACCTTCCG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTTCAGCCTGGGGTGTaGTGGGTGCCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLLQPGV*WVPLPP
Trigger: AGGAGGAAGGGGCACCCACCACACCCCAGGCTGAAG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCTTCAGCCTGGGGTGTaGTGGGTGCCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPLQPGV*WVPLPP
Trigger: AGGAGGAAGGGGCACCCACCACACCCCAGGCTGAAG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGCTCCCCAGGAGCAGCTaGGGACAGGGACCCCACTTT +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLLPRSS*GQGPHF
Trigger: AAAGTGGGGTCCCTGTCCCCAGCTGCTCCTGGGGAG...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCTCCCCAGGAGCAGCTaGGGACAGGGACCCCACTTT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAALPRSS*GQGPHF
Trigger: AAAGTGGGGTCCCTGTCCCCAGCTGCTCCTGGGGAG...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTAGCATGGCCGCCAGATaGCGCCGGCTCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPSMAAR*RRLARS
Trigger: AGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCT...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCGCCCACTCAGAGCATaGCCGCCAGATGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYRPLRA*PPDGAG
Trigger: GCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCG...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGACAGGAAGCCCGGCTaGCAAGGATCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLDRKPG*QGSGKG
Trigger: CCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCTGTC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAAGCCTGAGAGGGGCCTaGCCAGGCTTCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSASLRGA*PGFSRS
Trigger: GCTCCTGGAGAAGCCTGGCCAGGCCCCTCTCAGGCT...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR TCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGGGCCCAGTGGGGGCTaGCTGCTCCCAGAATCGAGC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPGPSGG*LLPESS
Trigger: GCTCGATTCTGGGAGCAGTCAGCCCCCACTGGGCCC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTTATTCTCCCCTGCCTaGCAGGAAGCCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAALFSPA*QEARLA
Trigger: TGCCAGCCGGGCTTCCTGTCAGGCAGGGGAGAATAA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAACACACACCGGCCCCTaGTCCCCCAGTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQETHTGP*SPSGRP
Trigger: GGGACGGCCACTGGGGGAGCAGGGGCCGGTGTGTGT...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGGCATGTTGGCGCTaGTGGTGGTCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLLACWR*WWSVWL
Trigger: CAGCCACACTGACCACCAGCAGCGCCAACATGCCAG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCTGGCATGTTGGCGCTaGTGGTGGTCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFLACWR*WWSVWL
Trigger: CAGCCACACTGACCACCAGCAGCGCCAACATGCCAG...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCGAGCTTCTAGCCCACTaGCCTGCAGAATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLELLAH*PAESPC
Trigger: GCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTC...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGGCCGGTCCCCTGTGTaGAGGTGCATGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFGRSPV*RCMWFL
Trigger: CAAGAACCACATGCACCTGCACACAGGGGACCGGCC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGGCCGGTCCCCTGTGTaGAGGTGCATGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLGRSPV*RCMWFL
Trigger: CAAGAACCACATGCACCTGCACACAGGGGACCGGCC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCCCTTTGAGGTGGCGCTaGAGGTGGTCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRPLRWR*RWSSLA
Trigger: CGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGG...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCCCAGTGGGGGCTGACTaGTCCCAGAATCGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLPVGAD*SQNRAR
Trigger: TCTAGCTCGATTCTGGGAGCAGTCAGCCCCCACTGG...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGCCTGCGTGCTCCCACTaGTTGGCATGGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREPACSH*LAWVSP
Trigger: CGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGG...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACGTGCCCCAGACCCCTaGTGTGTCTGTCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGRAPDP*CVCPAC
Trigger: GCACGCAGGACAGACACAGCAGGGGTCTGGGGCACG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTCCGCCTCACCTGTCCTaGTGTCTCACCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPPPHLS*CLTCPP
Trigger: TGGAGGACAGGTGAGACAGCAGGACAGGTGAGGCGG...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACAAGGCCGCGGTCAGTTaGTCGCCGCTCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYKAAVS*SPLAAG
Trigger: CCCAGCAGCGAGCGGCGAGCAACTGACCGCGGCCTT...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGCTAGCACAGCCCTGTaGGTGCGGTATTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFASTAL*VRYSRP
Trigger: GGGCCTTGAATACCGCACCCACAGGGCTGTGCTAGC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTGCTAGCACAGCCCTGTaGGTGCGGTATTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPASTAL*VRYSRP
Trigger: GGGCCTTGAATACCGCACCCACAGGGCTGTGCTAGC...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGCACAGCTGGCATGTTaGCGCTGCTGGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALAQLAC*RCWWSV
Trigger: CACTGACCACCAGCAGCGCCAACATGCCAGCTGTGC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCACAGCTGGCATGTTaGCGCTGCTGGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLAQLAC*RCWWSV
Trigger: CACTGACCACCAGCAGCGCCAACATGCCAGCTGTGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTAAGGCCTCCAGATACTaGCGGGCTCGCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSKASRY*RARSQS
Trigger: TGACTGTGAGCGAGCCCGCCAGTATCTGGAGGCCTT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACGGTGGCGGAGGTGGTaGGAGGGGCACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQERWRRW*EGHLWR
Trigger: CCTCCACAGGTGCCCCTCCCACCACCTCCGCCACCG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGGGAGGCAGTTCCTGTaGGAGGGCTGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAGRQFL*EGCSCP
Trigger: GGGACAGCTACAGCCCTCCCACAGGAACTGCCTCCC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCGCCAGCCCATAGGCTaGGGGATATACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWRQPIG*GIYQLL
Trigger: GAGGAGCTGGTATATCCCCCAGCCTATGGGCTGGCG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTTGGCTGTCCAGGCCTaGTGCCAGGTTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALLAVQA*CQVVLV
Trigger: CACCAGGACAACCTGGCACCAGGCCTGGACAGCCAA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGGTGGCGCTGCAGGTaGTCCTCCTTGGCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRRWRCR*SSLAKA
Trigger: GGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCT...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTTCTGGCCTTTGAGGTaGCGCTGCAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLFWPLR*RCRWSS
Trigger: GGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCACCTCCAGGCAGTTCTaGCCTTTGAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALTSRQF*PLRWRC
Trigger: GCAGCGCCACCTCAAAGGCCAGAACTGCCTGGAGGT...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRWWVVG*CIVLAA
Trigger: CGCCGCAAGGACGATGCACCACCCCACTACCCACCA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCATGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAWWVVG*CIVLAA
Trigger: CGCCGCAAGGACGATGCACCACCCCACTACCCACCA...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTAGCGGTAGAGGGTGGTaGGTAGTGGGGTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLSGRGW*VVGWCI
Trigger: GATGCACCACCCCACTACCCACCACCCTCTACCGCT...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWRKVSR*PLERSR
Trigger: CCTCGACCTCTCCAATGGCCACCTGGACACCTTCCG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCATTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSPTQSMAARWRRLARSPFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCCTGAGGCTCACAGTGTaGGAAGAAGCGCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALLRLTV*EEARPP
Trigger: TGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAG...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACGCCCACTCAGAGCATaGCCGCCAGATGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQERPLRA*PPDGAG
Trigger: GCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGCTGTGCAAATGGGCATaGGGGTGCATGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALLCKWA*GCMEGR
Trigger: CCTCCCTTCCATGCACCCCCATGCCCATTTGCACAG...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTCTGTGCAAATGGGCATaGGGGTGCATGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSLCKWA*GCMEGR
Trigger: CCTCCCTTCCATGCACCCCCATGCCCATTTGCACAG...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTGGGCAGCTGTGCAAATaGGCATGGGGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSGQLCK*AWGCME
Trigger: TTCCATGCACCCCCATGCCCATTTGCACAGCTGCCC...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCGGGCAGCTGTGCAAATaGGCATGGGGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLGQLCK*AWGCME
Trigger: TTCCATGCACCCCCATGCCCATTTGCACAGCTGCCC...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTATTGTCCCCACTTTCTaGGGCTGGGCCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLIVPTF*GWAPGL
Trigger: GAGACCTGGGGCCCAGCCCCAGAAAGTGGGGACAAT...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTAGCTTGGAATTGGAATaGGGGCTCTGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSLELE*GLWEEG
Trigger: CCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTCTCCCCCTAAGGCACTaGCTGGGAAAGCCGAAAGTA +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSLPLRH*LGKPKV
Trigger: TACTTTCGGCTTTCCCAGTCAGTGCCTTAGGGGGAG...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTAGCTCAGGAGCTCACTaGTGTGGTCCGGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSSGAH*CGPGME
Trigger: TTCCATTCCCGGACCACAGCAGTGAGCTCCTGAGCT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCCGGTATTCAAGGCCCTaGGTCCGGATGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFRYSRP*VRMVRS
Trigger: TGACCTCACCATCCGGACGCAGGGCCTTGAATACCG...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGGTATTCAAGGCCCTaGGTCCGGATGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLRYSRP*VRMVRS
Trigger: TGACCTCACCATCCGGACGCAGGGCCTTGAATACCG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGGCACAGCCCTGTGGGTaGGGTATTCAAGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREAQPCG*GIQGPA
Trigger: CGCAGGGCCTTGAATACCGCACCCACAGGGCTGTGC...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCACTGGCATGTTGGCGCTaGTGGTGGTCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSALACWR*WWSVWL
Trigger: CAGCCACACTGACCACCAGCAGCGCCAACATGCCAG...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTCCGGGGCTTGCGGCTaGGGCGGGCAACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGSGACG*GGQQAE
Trigger: CTCGGCCTGTTGCCCGCCGCAGCCGCAAGCCCCGGA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTCCCCTGTGTGCAGGTaGATGTGGTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLSPVCR*MWFLRS
Trigger: CGACCTCAAGAACCACATGCACCTGCACACAGGGGA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGGCCGGTCCCCTGTGTaGAGGTGCATGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAGRSPV*RCMWFL
Trigger: CAAGAACCACATGCACCTGCACACAGGGGACCGGCC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCAGTGGGGGCTGACTaGTCCCAGAATCGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWPVGAD*SQNRAR
Trigger: TCTAGCTCGATTCTGGGAGCAGTCAGCCCCCACTGG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCCCAGTGGGGGCTGACTaGTCCCAGAATCGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALPVGAD*SQNRAR
Trigger: TCTAGCTCGATTCTGGGAGCAGTCAGCCCCCACTGG...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTGTGTCTGTCCTGCGTaGTCCCACTGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWCVCPA*SHCLAW
Trigger: CCATGCCAAGCAGTGGGAGCACGCAGGACAGACACA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTGTGTCTGTCCTGCGTaGTCCCACTGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPCVCPA*SHCLAW
Trigger: CCATGCCAAGCAGTGGGAGCACGCAGGACAGACACA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGTGTCTGTCCTGCGTaGTCCCACTGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFCVCPA*SHCLAW
Trigger: CCATGCCAAGCAGTGGGAGCACGCAGGACAGACACA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTAAGCGAGAAGTTCTGTaGCCACTGCCTTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSKREVL*PLPWQG
Trigger: CCCTTGCCAAGGCAGTGGGCACAGAACTTCTCGCTT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGTGAGGTCACATAGGTaGCCCAGCTGGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAVRSHR*PSWRCS
Trigger: TGAGCAGCGCCAGCTGGGCCACCTATGTGACCTCAC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCGCATGTTGGCGCTGCTaGTGGTCAGTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLACWRC*WSVWLY
Trigger: ATACAGCCACACTGACCACCAGCAGCGCCAACATGC...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGHPRPG*ELLAHC
Trigger: GCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTAAGGCCTCCAGATACTaGCGGGCTCGCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLKASRY*RARSQS
Trigger: TGACTGTGAGCGAGCCCGCCAGTATCTGGAGGCCTT...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGAAGGCCTCCAGATACTaGCGGGCTCGCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWKASRY*RARSQS
Trigger: TGACTGTGAGCGAGCCCGCCAGTATCTGGAGGCCTT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCACCTCAGGGACTAGGTaGTTTGCTCTGGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALTSGTR*FALAPL
Trigger: CAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGT...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTTCTGGCCTTTGAGGTaGCGCTGCAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRFWPLR*RCRWSS
Trigger: GGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREWWVVG*CIVLAA
Trigger: CGCCGCAAGGACGATGCACCACCCCACTACCCACCA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTGCTCACCAGCTGGGGTaGATGAGGAGCGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPAHQLG*MRSVKT
Trigger: TGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGC...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACTGTGCCCACTGCCTTaGCAAGGGGGCGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQELCPLP*QGGAAH
Trigger: GTGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGGCTGGCAAGGATCTaGGAAGGGGATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLRLARI*EGDHFP
Trigger: GGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGCGGCTGGCAAGGATCTaGGAAGGGGATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLRLARI*EGDHFP
Trigger: GGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCG...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCATAGATAACAGGGACTaGTCCCGCTACCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLIDNRD*SRYPLP
Trigger: AGGGAGGGGGTAGCGGGACCAGTCCCTGTTATCTAT...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGATAGATAACAGGGACTaGTCCCGCTACCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALIDNRD*SRYPLP
Trigger: AGGGAGGGGGTAGCGGGACCAGTCCCTGTTATCTAT...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTGCTTCCCGGTGCTGTaGGGGTTAAGTCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLCFPVL*GLSLCP
Trigger: TGGGCAGAGACTTAACCCCCACAGCACCGGGAAGCA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR CCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTAACATCTTCACTTCCTaGGGGCCGAGGCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPNIFTS*GPRRGR
Trigger: TCTTCCCCGCCTCGGCCCCCAGGAAGTGAAGATGTT...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR TCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCTTGTCGTTCCTGGTaGATCGAACACCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLACRSW*IEHRRP
Trigger: AGGTCTGCGGTGTTCGATTCACCAGGAACGACAAGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCGCTTGTCGTTCCTGGTaGATCGAACACCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAACRSW*IEHRRP
Trigger: AGGTCTGCGGTGTTCGATTCACCAGGAACGACAAGC...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGAGCTTGGAATTGGAATaGGGGCTCTGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWSLELE*GLWEEG
Trigger: CCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYAGWSC*GSQCGK
Trigger: CTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTAGCTCAGGAGCTCACTaGTGTGGTCCGGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLSSGAH*CGPGME
Trigger: TTCCATTCCCGGACCACAGCAGTGAGCTCCTGAGCT...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGAGCTTCTAGCCCACTaGCCTGCAGAATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLELLAH*PAESPC
Trigger: GCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGCCCACTGCCCCCACTaGTGCCCACTCTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGAHCPH*CPLCPP
Trigger: TGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTCCCCTGTGTGCAGGTaGATGTGGTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLSPVCR*MWFLRS
Trigger: CGACCTCAAGAACCACATGCACCTGCACACAGGGGA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTCCCCTGTGTGCAGGTaGATGTGGTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPSPVCR*MWFLRS
Trigger: CGACCTCAAGAACCACATGCACCTGCACACAGGGGA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACTCCCCGGCCTTGTGCTaGTTCAGTCTGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYSPALC*FSLALV
Trigger: GACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGA...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGTGTCCCCGGCCTTGTaGTGCTTCAGTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPVSPAL*CFSLAL
Trigger: GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACAC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCGCAGCCCCTTCCCCTaGGGCCAAGCGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYRSPFP*GQARSS
Trigger: AGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCG...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTGTTGGCGCTGCTGGTaGTCAGTGTGGCTGTATAGG +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWCWRCW*SVWLYR
Trigger: CCTATACAGCCACACTGACCACCAGCAGCGCCAACA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTGTTGGCGCTGCTGGTaGTCAGTGTGGCTGTATAGG +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAACWRCW*SVWLYR
Trigger: CCTATACAGCCACACTGACCACCAGCAGCGCCAACA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTCATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPHPRPG*ELLAHC
Trigger: GCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATG...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTGGGAGGGGCACCTGTaGAGGACTGTCTTCACCATT +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALWEGHL*RTVFTI
Trigger: AATGGTGAAGACAGTCCTCCACAGGTGCCCCTCCCA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTGGGAGGGGCACCTGTaGAGGACTGTCTTCACCATT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAWEGHL*RTVFTI
Trigger: AATGGTGAAGACAGTCCTCCACAGGTGCCCCTCCCA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTGGGAGGGGCACCTGTaGAGGACTGTCTTCACCATT +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLWEGHL*RTVFTI
Trigger: AATGGTGAAGACAGTCCTCCACAGGTGCCCCTCCCA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSLLWPP*FAGKLS
Trigger: GGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALLLWPP*FAGKLS
Trigger: GGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLLGGLL*PPWFAG
Trigger: TCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCACCTCAGGGACTAGGTaGTTTGCTCTGGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRTSGTR*FALAPL
Trigger: CAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGT...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGT +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYDGRAL*APQGLG
Trigger: ACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGGGAGGCAGTTCCTGTaGGAGGGCTGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYGRQFL*EGCSCP
Trigger: GGGACAGCTACAGCCCTCCCACAGGAACTGCCTCCC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACGCCAGCCCATAGGCTaGGGGATATACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGRQPIG*GIYQLL
Trigger: GAGGAGCTGGTATATCCCCCAGCCTATGGGCTGGCG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGCGCCAGCCCATAGGCTaGGGGATATACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRERQPIG*GIYQLL
Trigger: GAGGAGCTGGTATATCCCCCAGCCTATGGGCTGGCG...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTCAGGTCAGGATCGATaGCATCCTCATCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALSGQDR*HPHLSP
Trigger: TGGGCTCAGATGAGGATGCCATCGATCCTGACCTGA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGATTCTGGCCTTTGAGGTaGCGCTGCAGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGFWPLR*RCRWSS
Trigger: GGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAA...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACAGCAGCGGTAGAGGGTaGTGGGTAGTGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYSSGRG*WVVGWC
Trigger: GCACCACCCCACTACCCACCACCCTCTACCGCTGCT...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCTTCAGCCTGGGGTGTaGTGGGTGCCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYLQPGV*WVPLPP
Trigger: AGGAGGAAGGGGCACCCACCACACCCCAGGCTGAAG...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTGTGCTGCTTCAGTCTaGCCCTCGTCCCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALCAASV*PSSLFK
Trigger: CTTAAAGAGGGACGAGGGCCAGACTGAAGCAGCACA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACTCCCACTGCTTGGCATaGGTGTCCCCGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYSHCLA*VSPALC
Trigger: GCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTTTCAAGCTTCCACCTaGCTTTCCCCCACCTACCCT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLFQAST*LSPTYP
Trigger: AGGGTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCCGGCTGGCAAGGATCTaGGAAGGGGATCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRRLARI*EGDHFP
Trigger: GGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCG...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGACTGTTAGGGGTACCTaGGCAGCTGTGCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWTVRGT*AAVQMG
Trigger: GCCCATTTGCACAGCTGCCCAGGTACCCCTAACAGT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCATAGATAACAGGGACTaGTCCCGCTACCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAIDNRD*SRYPLP
Trigger: AGGGAGGGGGTAGCGGGACCAGTCCCTGTTATCTAT...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACCCCAGTCCTGGTTCTaGGGCTCCTCTCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEPQSWF*GSSQPS
Trigger: CGACGGCTGAGAGGAGCCCCAGAACCAGGACTGGGG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR TCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCAGACAGGGCACTCCTaGGGCATCTGGGAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGQTGHS*GIWERR
Trigger: ACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCTG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEAGWSC*GSQCGK
Trigger: CTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGC...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACTTATTCTCCCCTGCCTaGCAGGAAGCCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYLFSPA*QEARLA
Trigger: TGCCAGCCGGGCTTCCTGTCAGGCAGGGGAGAATAA...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCTCAGGAGCTCACTaGTGTGGTCCGGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRSSGAH*CGPGME
Trigger: TTCCATTCCCGGACCACAGCAGTGAGCTCCTGAGCT...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACGGTATTCAAGGCCCTaGGTCCGGATGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGRYSRP*VRMVRS
Trigger: TGACCTCACCATCCGGACGCAGGGCCTTGAATACCG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTCTAGCCCACTGCCCTaGAGAATCTCCATGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAASSPLP*RISMQA
Trigger: TGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTCTAGCCCACTGCCCTaGAGAATCTCCATGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLSSPLP*RISMQA
Trigger: TGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTCTAGCCCACTGCCCTaGAGAATCTCCATGCAAGCA +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFSSPLP*RISMQA
Trigger: TGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAAGCTTTCCGGGGCTTaGGGCTGCGGCGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGKLSGA*GCGGQQ
Trigger: CTGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAGCTGTCCAGGCCTGGTaGCAGGTTGTCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEAVQAW*QVVLVQ
Trigger: CTGCACCAGGACAACCTGGCACCAGGCCTGGACAGC...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTGGGTAGTGGGGTGGTaGATCGTCCTTGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGWVVGW*IVLAAP
Trigger: CGGCGCCGCAAGGACGATGCACCACCCCACTACCCA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCACCTACCCTTCCTTTaGCGGCCCCCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLHLPFL*RPPLHN
Trigger: ATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTG...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCCACCTACCCTTCCTTTaGCGGCCCCCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALHLPFL*RPPLHN
Trigger: ATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTG...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAGGGATTATTCTCCCCTaGCTGACAGGAAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGGIILP*LTGSPA
Trigger: AGCCGGGCTTCCTGTCAGGCAGGGGAGAATAATCCC...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGCTGTGGTCCGGGAATaGAATCCCAATCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFAVVRE*NPNQVI
Trigger: GATGACCTGATTGGGATTCCATTCCCGGACCACAGC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGCTAGCACAGCCCTGTaGGTGCGGTATTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPASTAL*VRYSRP
Trigger: GGGCCTTGAATACCGCACCCACAGGGCTGTGCTAGC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLLLWPP*FAGKLS
Trigger: GGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCACTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSALGGLL*PPWFAG
Trigger: TCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAG...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGACCTCAGGGACTAGGTaGTTTGCTCTGGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRETSGTR*FALAPL
Trigger: CAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGT...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTCAGGTCAGGATCGATaGCATCCTCATCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALSGQDR*HPHLSP
Trigger: TGGGCTCAGATGAGGATGCCATCGATCCTGACCTGA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACACCTCCAGGCAGTTCTaGCCTTTGAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYTSRQF*PLRWRC
Trigger: GCAGCGCCACCTCAAAGGCCAGAACTGCCTGGAGGT...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCTCCAGGCAGTTCTaGCCTTTGAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPTSRQF*PLRWRC
Trigger: GCAGCGCCACCTCAAAGGCCAGAACTGCCTGGAGGT...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTTTAAGAGGACTCCATaGCACCTTCAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLFKRTP*HLQPGV
Trigger: CACCCCAGGCTGAAGGTGCCATGGAGTCCTCTTAAA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGTGCTGCTTCAGTCTaGCCCTCGTCCCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: CPACSHCLAWVSPALCCFCAASV*PSSLFK
Trigger: CTTAAAGAGGGACGAGGGCCAGACTGAAGCAGCACA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCGTGCTCCCACTGCTTaGCATGGGTGTCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGRAPTA*HGCPRP
Trigger: AGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAGCTCACCAGCTGGGGTaGATGAGGAGCGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGAHQLG*MRSVKT
Trigger: TGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGC...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAGACAGGAAGCCCGGCTaGCAAGGATCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEDRKPG*QGSGKG
Trigger: CCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCTGTC...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAACTGTTAGGGGTACCTaGGCAGCTGTGCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSATVRGT*AAVQMG
Trigger: GCCCATTTGCACAGCTGCCCAGGTACCCCTAACAGT...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTATTGTCCCCACTTTCTaGGGCTGGGCCCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPIVPTF*GWAPGL
Trigger: GAGACCTGGGGCCCAGCCCCAGAAAGTGGGGACAAT...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACAAATCCCCCAGTCCTaGTTCTGGGGCTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGQIPQS*FWGSSQ
Trigger: CTGAGAGGAGCCCCAGAACCAGGACTGGGGGATTTG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTGGGTAGTGGGGTGGTaGATCGTCCTTGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGWVVGW*IVLAAP
Trigger: CGGCGCCGCAAGGACGATGCACCACCCCACTACCCA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCTTTGCCGGCCCCCTTTaGATAATTCACTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAFAGPL*IIHCQE
Trigger: TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAA...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACCGCCTCACCTGTCCTaGTGTCTCACCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEPPHLS*CLTCPP
Trigger: TGGAGGACAGGTGAGACAGCAGGACAGGTGAGGCGG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCTGTGGTCCGGGAATaGAATCCCAATCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAAVVRE*NPNQVI
Trigger: GATGACCTGATTGGGATTCCATTCCCGGACCACAGC...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAGTGAGGTCACATAGGTaGCCCAGCTGGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEVRSHR*PSWRCS
Trigger: TGAGCAGCGCCAGCTGGGCCACCTATGTGACCTCAC...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGGCATGTTGGCGCTGCTaGTGGTCAGTGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGREACWRC*WSVWLY
Trigger: ATACAGCCACACTGACCACCAGCAGCGCCAACATGC...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAAGCCTGGAGCACAGCTaGCATGTTGGCGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQESLEHS*HVGAAG
Trigger: ACCAGCAGCGCCAACATGCCAGCTGTGCTCCAGGCT...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGT +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGDGRAL*APQGLG
Trigger: ACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGTGGCGCTGCAGGTaGTCCTCCTTGGCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGRWRCR*SSLAKA
Trigger: GGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQERKVSR*PLERSR
Trigger: CCTCGACCTCTCCAATGGCCACCTGGACACCTTCCG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCTTCAGCCTGGGGTGTaGTGGGTGCCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGLQPGV*WVPLPP
Trigger: AGGAGGAAGGGGCACCCACCACACCCCAGGCTGAAG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCATTTAAGAGGACTCCATaGCACCTTCAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAFKRTP*HLQPGV
Trigger: CACCCCAGGCTGAAGGTGCCATGGAGTCCTCTTAAA...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTTTAAGAGGACTCCATaGCACCTTCAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRFKRTP*HLQPGV
Trigger: CACCCCAGGCTGAAGGTGCCATGGAGTCCTCTTAAA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGTTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRSPFPCGQARSSVPTALFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGACAGGAAGCCCGGCTaGCAAGGATCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGDRKPG*QGSGKG
Trigger: CCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCTGTC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp AGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCATCCTAAGAGCAGAGTaGGGATTATTCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPAGKDLGRGSLSHRSAAILRAE*GLFSPA
Trigger: GGCAGGGGAGAATAATCCCCACTCTGCTCTTAGGAT...GGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGATCCTAAGAGCAGAGTaGGGATTATTCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLILRAE*GLFSPA
Trigger: GGCAGGGGAGAATAATCCCCACTCTGCTCTTAGGAT...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGGAGGCGAGGGGAGTTaGCTGCTTCCCGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGGGEGS*LLPGAV
Trigger: CACAGCACCGGGAAGCAGCCAACTCCCCTCGCCTCC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR TCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGGCAGTTCTGGCCTTTaGGGTGGCGCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGGSSGL*GGAAGG
Trigger: ACCACCTGCAGCGCCACCTCAAAGGCCAGAACTGCC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGAGWSC*GSQCGK
Trigger: CTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACCTGAAATGCTAAGATaGGGCCCAGGACAACCCGAT +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGPEMLR*GPGQPD
Trigger: ATCGGGTTGTCCTGGGCCTCATCTTAGCATTTCAGG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTCTCCCCCTAAGGCACTaGCTGGGAAAGCCGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPLPLRH*LGKPKV
Trigger: TACTTTCGGCTTTCCCAGTCAGTGCCTTAGGGGGAG...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACGGTATTCAAGGCCCTaGGTCCGGATGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQERYSRP*VRMVRS
Trigger: TGACCTCACCATCCGGACGCAGGGCCTTGAATACCG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGAGCTTCTAGCCCACTaGCCTGCAGAATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPELLAH*PAESPC
Trigger: GCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCTGGCCCCCTTGGTTTaGAGGAAAGCTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGLAPLV*RKAFRG
Trigger: GCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCCTTTGAGGTGGCGCTaGAGGTGGTCCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGPLRWR*RWSSLA
Trigger: CGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTCCCCGGCCTTGTGCTaGTTCAGTCTGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGSPALC*FSLALV
Trigger: GACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLNLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCATTTGCCGGCCCCCTTTaGATAATTCACTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAFAGPL*IIHCQE
Trigger: TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAA...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTAAGCGAGAAGTTCTGTaGCCACTGCCTTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPKREVL*PLPWQG
Trigger: CCCTTGCCAAGGCAGTGGGCACAGAACTTCTCGCTT...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTGCTGGTGGTCAGTGTaGCTGTATAGGCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLCWWSV*LYRQIQ
Trigger: TTGAATTTGCCTATACAGCCACACTGACCACCAGCA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTTGTTGGCGCTGCTGGTaGTCAGTGTGGCTGTATAGG +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPCWRCW*SVWLYR
Trigger: CCTATACAGCCACACTGACCACCAGCAGCGCCAACA...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGCACAGCTGGCATGTTaGCGCTGCTGGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGAQLAC*RCWWSV
Trigger: CACTGACCACCAGCAGCGCCAACATGCCAGCTGTGC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGACTGTCTTCACCATTaGGAACTCCAGAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPDCLHH*ELQRPW
Trigger: CCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRELLWPP*FAGKLS
Trigger: GGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGGGAGGCAGTTCCTGTaGGAGGGCTGTAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGGRQFL*EGCSCP
Trigger: GGGACAGCTACAGCCCTCCCACAGGAACTGCCTCCC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTTGGCTGTCCAGGCCTaGTGCCAGGTTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGLAVQA*CQVVLV
Trigger: CACCAGGACAACCTGGCACCAGGCCTGGACAGCCAA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCAGGTGGCGCTGCAGGTaGTCCTCCTTGGCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGRWRCR*SSLAKA
Trigger: GGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCT...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGACCTCCAGGCAGTTCTaGCCTTTGAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGTSRQF*PLRWRC
Trigger: GCAGCGCCACCTCAAAGGCCAGAACTGCCTGGAGGT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGCGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGRKVSR*PLERSR
Trigger: CCTCGACCTCTCCAATGGCCACCTGGACACCTTCCG...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTTCTTAGCTTGGAATTaGAATGAGGGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLFLAWN*NEGSGR
Trigger: CCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTGGGATCACCCCAATTTaGGGAGCCTCTGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPGITPI*GASAPI
Trigger: TATTGGGGCAGAGGCTCCCCAAATTGGGGTGATCCC...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCTCCCCAGGAGCAGCTaGGGACAGGGACCCCACTTT +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGLPRSS*GQGPHF
Trigger: AAAGTGGGGTCCCTGTCCCCAGCTGCTCCTGGGGAG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCCTGAAATGCTAAGATaGGGCCCAGGACAACCCGAT +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYPEMLR*GPGQPD
Trigger: ATCGGGTTGTCCTGGGCCTCATCTTAGCATTTCAGG...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACTCCCCCTAAGGCACTaGCTGGGAAAGCCGAAAGTA +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQELPLRH*LGKPKV
Trigger: TACTTTCGGCTTTCCCAGTCAGTGCCTTAGGGGGAG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTGGGGTGAGGGAGGATaGGGACCAGGCTGTAACATC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGWGEGG*GPGCNI
Trigger: GATGTTACAGCCTGGTCCTCATCCTCCCTCACCCCA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS-3UTR GCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAAGCTCAGGAGCTCACTaGTGTGGTCCGGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQESSGAH*CGPGME
Trigger: TTCCATTCCCGGACCACAGCAGTGAGCTCCTGAGCT...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCTGGCCCCCTTGGTTTaGAGGAAAGCTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGLAPLV*RKAFRG
Trigger: GCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTCTGGGAGCGGCGTTTaGGCACCAGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGSGSGV*APACLG
Trigger: GCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSANLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACCACCTACCCTTCCTTTaGCGGCCCCCTTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYHLPFL*RPPLHN
Trigger: ATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTG...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGCTGTGGTCCGGGAATaGAATCCCAATCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYAVVRE*NPNQVI
Trigger: GATGACCTGATTGGGATTCCATTCCCGGACCACAGC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTGCTGGTGGTCAGTGTaGCTGTATAGGCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLCWWSV*LYRQIQ
Trigger: TTGAATTTGCCTATACAGCCACACTGACCACCAGCA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTGCTGGTGGTCAGTGTaGCTGTATAGGCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALCWWSV*LYRQIQ
Trigger: TTGAATTTGCCTATACAGCCACACTGACCACCAGCA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAATGTTGGCGCTGCTGGTaGTCAGTGTGGCTGTATAGG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQECWRCW*SVWLYR
Trigger: CCTATACAGCCACACTGACCACCAGCAGCGCCAACA...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAGACTGTCTTCACCATTaGGAACTCCAGAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEDCLHH*ELQRPW
Trigger: CCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTC...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGACCTCAGGGACTAGGTaGTTTGCTCTGGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGTSGTR*FALAPL
Trigger: CAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTTGGCTGTCCAGGCCTaGTGCCAGGTTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGLAVQA*CQVVLV
Trigger: CACCAGGACAACCTGGCACCAGGCCTGGACAGCCAA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGGGCAGCTGTGCAAATaGGCATGGGGGTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGGQLCK*AWGCME
Trigger: TTCCATGCACCCCCATGCCCATTTGCACAGCTGCCC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAACCTGAAATGCTAAGATaGGGCCCAGGACAACCCGAT +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEPEMLR*GPGQPD
Trigger: ATCGGGTTGTCCTGGGCCTCATCTTAGCATTTCAGG...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGAGCTTCTAGCCCACTaGCCTGCAGAATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGELLAH*PAESPC
Trigger: GCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTCCCCTGTGTGCAGGTaGATGTGGTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGSPVCR*MWFLRS
Trigger: CGACCTCAAGAACCACATGCACCTGCACACAGGGGA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCCAGTGGGGGCTGACTaGTCCCAGAATCGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGPVGAD*SQNRAR
Trigger: TCTAGCTCGATTCTGGGAGCAGTCAGCCCCCACTGG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTTAGAAATACATTATTaGTTCTACTCCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLLEIHY*FYSPGA
Trigger: TGCTCCTGGGGAGTAGAAGCAATAATGTATTTCTAA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAAGCGAGAAGTTCTGTaGCCACTGCCTTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGKREVL*PLPWQG
Trigger: CCCTTGCCAAGGCAGTGGGCACAGAACTTCTCGCTT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGACTGTCTTCACCATTaGGAACTCCAGAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGDCLHH*ELQRPW
Trigger: CCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCAATACCTTCTTAGCTTaGAATTGGAATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLNTFLA*NWNEGS
Trigger: AGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATT...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGCTCCGGCTCGCACCTaGGCGGGGAGGAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRAPART*AGRRWG
Trigger: TCCCCATCTCCTCCCCGCCCAGGTGCGAGCCGGAGC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGACTGTTAGGGGTACCTaGGCAGCTGTGCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGTVRGT*AAVQMG
Trigger: GCCCATTTGCACAGCTGCCCAGGTACCCCTAACAGT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGCTTGTCGTTCCTGGTaGATCGAACACCGCAGACCT +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGACRSW*IEHRRP
Trigger: AGGTCTGCGGTGTTCGATTCACCAGGAACGACAAGC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCAGCCCACAGGGGTCTaGGGAAAGAGGACCAACTTT +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGQPTGV*GKRTNF
Trigger: AAAGTTGGTCCTCTTTCCCCAGACCCCTGTGGGCTG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS-3UTR CCA 90 bp GTTAGGGGTACCTGGGCAGCTGTGCAAATGGGCATGGGGGTGCATGGAAGGGAGTGCTGGTGGTCAGTGTaGCTGTATAGGCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: VRGTWAAVQMGMGVHGRECWWSV*LYRQIQ
Trigger: TTGAATTTGCCTATACAGCCACACTGACCACCAGCA...CTCCCTTCCATGCACCCCCATGCCCATTTGCACAGCTGCCCAGGTACCCCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGACTGTCTTCACCATTaGGAACTCCAGAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGDCLHH*ELQRPW
Trigger: CCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGLGGLL*PPWFAG
Trigger: TCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTCAGGTCAGGATCGATaGCATCCTCATCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGSGQDR*HPHLSP
Trigger: TGGGCTCAGATGAGGATGCCATCGATCCTGACCTGA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCAATACCTTCTTAGCTTaGAATTGGAATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHCLAWVSPALCCFSLALNTFLA*NWNEGS
Trigger: AGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATT...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAATCCTAAGAGCAGAGTaGGGATTATTCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEILRAE*GLFSPA
Trigger: GGCAGGGGAGAATAATCCCCACTCTGCTCTTAGGAT...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACAGACAGGGCACTCCTaGGGCATCTGGGAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRQTGHS*GIWERR
Trigger: ACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCTG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTCTAGCCCACTGCCCTaGAGAATCTCCATGCAAGCA +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGSSPLP*RISMQA
Trigger: TGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAAGCTTTCCGGGGCTTaGGGCTGCGGCGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRKLSGA*GCGGQQ
Trigger: CTGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGTTTGCCGGCCCCCTTTaGATAATTCACTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGFAGPL*IIHCQE
Trigger: TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAA...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTCAGGTCAGGATCGATaGCATCCTCATCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGSGQDR*HPHLSP
Trigger: TGGGCTCAGATGAGGATGCCATCGATCCTGACCTGA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACCTGCGTCCGGATGGTaGGGTCACATAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRPASGW*GHIGGP
Trigger: TGGGCCACCTATGTGACCTCACCATCCGGACGCAGG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGGCAGTTCTGGCCTTTaGGGTGGCGCTGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRGSSGL*GGAAGG
Trigger: ACCACCTGCAGCGCCACCTCAAAGGCCAGAACTGCC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGAACAAGACATTCCCTaGCCAGGGCCGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILREQDIP*PGPWGG
Trigger: CCCTCCCCACGGCCCTGGGCAGGGAATGTCTTGTTC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGGCCGGTCCCCTGTGTaGAGGTGCATGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRGRSPV*RCMWFL
Trigger: CAAGAACCACATGCACCTGCACACAGGGGACCGGCC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGATTAGAAATACATTATTaGTTCTACTCCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KALVPSPHPLETRIAEVGLEIHY*FYSPGA
Trigger: TGCTCCTGGGGAGTAGAAGCAATAATGTATTTCTAA...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAGCCTGGAGCACAGCTaGCATGTTGGCGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRSLEHS*HVGAAG
Trigger: ACCAGCAGCGCCAACATGCCAGCTGTGCTCCAGGCT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAGCGGTAGAGGGTGGTaGGTAGTGGGGTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRSGRGW*VVGWCI
Trigger: GATGCACCACCCCACTACCCACCACCCTCTACCGCT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGACTGTGCAAATGGGCATaGGGGTGCATGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRLCKWA*GCMEGR
Trigger: CCTCCCTTCCATGCACCCCCATGCCCATTTGCACAG...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR TCA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCGAACCCTCTGAAGTATaGTCATCATCTGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGEPSEV*SSSVSQ
Trigger: CTGTGAAACAGATGATGATCATACTTCAGAGGGTTC...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGATGGGAGGGGCACCTGTaGAGGACTGTCTTCACCATT +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRWEGHL*RTVFTI
Trigger: AATGGTGAAGACAGTCCTCCACAGGTGCCCCTCCCA...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAATACCTTCTTAGCTTaGAATTGGAATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGNTFLA*NWNEGS
Trigger: AGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGATGTGCTGCTTCAGTCTaGCCCTCGTCCCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRCAASV*PSSLFK
Trigger: CTTAAAGAGGGACGAGGGCCAGACTGAAGCAGCACA...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR GCA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAATTTGGGGAGCCTCTaGCCCAATACCTTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRNLGSL*PNTFLA
Trigger: AGCTAAGAAGGTATTGGGGCAGAGGCTCCCCAAATT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGAAGGCCGCGGTCAGTaGCTCGCCGCTCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GARPLRAWPPDGAGSPALEGRGQ*LAARCW
Trigger: CCAGCAGCGAGCGGCGAGCAACTGACCGCGGCCTTC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GARPLRAWPPDGAGSPALVSRWP*ERSRPA
Trigger: CGCTGGCCTCGACCTCTCCAATGGCCACCTGGACAC...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp GCCAGCGGGGGATGCAGCAGCGGTAGAGGGTGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCGCCGTCGGGTGCGCACCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASGGCSSGRGWWVVG*CIVLAAPSGAHLQA
Trigger: TGCCTGGAGGTGCGCACCCGACGGCGCCGCAAGGACGATGCACCACCCCACTACCCACCACCCTCTACCGCTGCTGCATCCCCCGCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS TCA 90 bp GTTCTGGGGCTCCTCTCAGCCGTCGGGTCCGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAGAAGCGCGTCCCCCACCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VLGLLSAVGSAGWSC*GSQCGKKRVPHQAR
Trigger: CCGGGCCTGGTGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCTGAGAGGAGCCCCAGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417934.6
ENST00000461530.1
CDS-3UTR CAA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCAGCACAGCTGGCATGTaGGCGCTGCTGGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: GARPLRAWPPDGAGSPALSTAGM*ALLVVS
Trigger: ACTGACCACCAGCAGCGCCAACATGCCAGCTGTGCT...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCGTTTGCGCACCAGCTaGTCTTGGCTGTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GARPLRAWPPDGAGSPALRLRTS*SWLSRP
Trigger: AGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACG...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GTCCGCAGCCCCTTCCCCTGCGGCCAAGCGAGAAGTTCTGTGCCCACTGCCTTGGGTGGTGCATCGTCCTaGCGGCGCCGTCGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: VRSPFPCGQARSSVPTALGGASS*RRRRVR
Trigger: GCGCACCCGACGGCGCCGCAAGGACGATGCACCACC...CAAGGCAGTGGGCACAGAACTTCTCGCTTGGCCGCAGGGGAAGGGGCTGCGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS TCA 90 bp CCCCATCTTCTCCTCTCAGCCGTCGGGTCCGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAGAAGCGCGTCCCCCACCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PHLLLSAVGSAGWSC*GSQCGKKRVPHQAR
Trigger: CCGGGCCTGGTGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCTGAGAGGAGAAGATGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000487542.1
ENST00000535420.5
CDS TCA 90 bp GCGGTTAGGACACTCTCAGCCGTCGGGTCCGCTGGCTGGAGCTGCTaGGGCTCACAGTGTGGGAAGAAGCGCGTCCCCCACCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AVRTLSAVGSAGWSC*GSQCGKKRVPHQAR
Trigger: CCGGGCCTGGTGGGGGACGCGCTTCTTCCCACACTGTGAGCCTCAGCAGCTCCAGCCAGCGGACCCGACGGCTGAGAGTGTCCTAACCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483226.1
CDS-3UTR CAA 90 bp GGCGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCTCCTTGGCGAAAGCCTaGTGGCACAGGTGGCACTCA +
Preference number: 5 (lower is better)
Translates to: GARPLRAWPPDGAGSPALSLAKA*WHRWHS
Trigger: TGAGTGCCACCTGTGCCACAAGGCTTTCGCCAAGGA...GAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGGTGGTGCATCGTCCTaGCGGCGCCGTCGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLGGASS*RRRRVR
Trigger: GCGCACCCGACGGCGCCGCAAGGACGATGCACCACC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 90 bp CTGTGGGAGGGCTGTAGCTGTCCCCCGGCCCACTGCCCCCACTGCTaGCCACTCTGCCCGCCACCTCCTCCTCCTCATAGGTCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: LWEGCSCPPAHCPHC*PLCPPPPPPHRSRD
Trigger: ATCCCTTGACCTATGAGGAGGAGGAGGTGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGCCGGGGGACAGCTACAGCCCTCCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 90 bp TTCCTGTGGGAGGGCTGTAGCTGTCCCCCGGCCCACTGCCCCCACTaGTGCCCACTCTGCCCGCCACCTCCTCCTCCTCATAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: FLWEGCSCPPAHCPH*CPLCPPPPPPHRSR
Trigger: CCTTGACCTATGAGGAGGAGGAGGTGGCGGGCAGAGTGGGCAGCAGTGGGGGCAGTGGGCCGGGGGACAGCTACAGCCCTCCCACAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp ATTGGAGAGGTCGAGGCCAGCGGGGGATGCAGCAGCGGTAGAGGGTaGTGGGTAGTGGGGTGGTGCATCGTCCTTGCGGCGCCGTCGGGT +
Preference number: 5 (lower is better)
Translates to: IGEVEASGGCSSGRG*WVVGWCIVLAAPSG
Trigger: ACCCGACGGCGCCGCAAGGACGATGCACCACCCCACTACCCACCACCCTCTACCGCTGCTGCATCCCCCGCTGGCCTCGACCTCTCCAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGCTCGCCCACTCAGAGCATGGCCGCCAGATGGCGCCGGCTCGCCCGCTCTCCACAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RSPTQSMAARWRRLARSPQGLGG*LWPPWF
Trigger: AAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTG...TGGAGAGCGGGCGAGCCGGCGCCATCTGGCGGCCATGCTCTGAGTGGGCGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGCGTGCTCCCACTGCTaGGCATGGGTGTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SHCLAWVSPALCCFSLALACSHC*AWVSPA
Trigger: GGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGCGTGCTCCCACTGCTaGGCATGGGTGTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWACSHC*AWVSPA
Trigger: GGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCGTGCTCCCACTGCTaGGCATGGGTGTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLACSHC*AWVSPA
Trigger: GGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTTCTGTGCCCACTGCCTaGGCAAGGGGGCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSSVPTA*ARGRRS
Trigger: TGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAGA...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 90 bp GTGGGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTTGGTTTaGAGGAAAGCTTTCCGGGGCTTGCGGCTGCGGCGGGCAACAGGC +
Preference number: 5 (lower is better)
Translates to: VGTSGTRWFALAPLV*RKAFRGLRLRRATG
Trigger: GCCTGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAAAGCTTTCCGGGGCTaGCGGCTGCGGCGGGCAACA +
Preference number: 5 (lower is better)
Translates to: CPACSHCLAWVSPALCCFKAFRG*RLRRAT
Trigger: TGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTT...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGAAAGCTTTCCGGGGCTaGCGGCTGCGGCGGGCAACA +
Preference number: 5 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLKAFRG*RLRRAT
Trigger: TGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTT...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTAAAGCTTTCCGGGGCTaGCGGCTGCGGCGGGCAACA +
Preference number: 5 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPKAFRG*RLRRAT
Trigger: TGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTT...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTCTGGCCCCCTTGGTTaGCAGGAAAGCTTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLSGPLG*QESFPG
Trigger: CCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGCGCACCAGCTTGTCTaGGCTGTCCAGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWAHQLV*AVQAWC
Trigger: GCACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTGCGCACCAGCTTGTCTaGGCTGTCCAGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLAHQLV*AVQAWC
Trigger: GCACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGC...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACGGTGGTGCATCGTCCTaGCGGCGCCGTCGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYGGASS*RRRRVR
Trigger: GCGCACCCGACGGCGCCGCAAGGACGATGCACCACC...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWVSRWP*ERSRPA
Trigger: CGCTGGCCTCGACCTCTCCAATGGCCACCTGGACAC...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: CPACSHCLAWVSPALCCFVSRWP*ERSRPA
Trigger: CGCTGGCCTCGACCTCTCCAATGGCCACCTGGACAC...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CPACSHCLAWVSPALCCFWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTCTGTGCCCACTGCCTaGGCAAGGGGGCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRSVPTA*ARGRRS
Trigger: TGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAGA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp GCACTGTGGGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCCGGGGCTTGCGGCTGCGGCGGGCAA +
Preference number: 5 (lower is better)
Translates to: ALWAPQGLGGLLWPP*FAGKLSGACGCGGQ
Trigger: TTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp GATGGGCGGGCACTGTGGGCACCTCAGGGACTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGAAAGCTTTCCGGGGCTTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: DGRALWAPQGLGGLL*PPWFAGKLSGACGC
Trigger: GCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTCGTTTGCGCACCAGCTaGTCTTGGCTGTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSRLRTS*SWLSRP
Trigger: AGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACG...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCCAGTATCTGGGAGCGGCGTTaGCGCACCAGCTTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GAAHQLGWMRSVKTARSSIWERR*RTSLSW
Trigger: CCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGAT...ACTGGAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp CCGCCACCTCCTCCTCCTCATAGGTCAAGGGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: PPPPPPHRSRDGRAL*APQGLGGLLWPPWF
Trigger: AAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATCCCTTGACCTATGAGGAGGAGGAGGTGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp GACTGCTCCCAGAATCGAGCTAGAGAGAGGCGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGGCCAGCGGGGGATGCAGCAGCGGTA +
Preference number: 5 (lower is better)
Translates to: DCSQNRARERRKVSR*PLERSRPAGDAAAV
Trigger: TACCGCTGCTGCATCCCCCGCTGGCCTCGACCTCTCCAATGGCCACCTGGACACCTTCCGCCTCTCTCTAGCTCGATTCTGGGAGCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGAGCACAGCTGGCATGTaGGCGCTGCTGGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWSTAGM*ALLVVS
Trigger: ACTGACCACCAGCAGCGCCAACATGCCAGCTGTGCT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAAAAGCTTTCCGGGGCTaGCGGCTGCGGCGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KALVPSPHPLETRIAEVGKAFRG*RLRRAT
Trigger: TGTTGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTT...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTCTGGCCCCCTTGGTTaGCAGGAAAGCTTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWSGPLG*QESFPG
Trigger: CCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTTCTGGCCCCCTTGGTTaGCAGGAAAGCTTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LSCVLPLLGMGVPGLVLLSGPLG*QESFPG
Trigger: CCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGA...AAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAGCGCACCAGCTTGTCTaGGCTGTCCAGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KALVPSPHPLETRIAEVGAHQLV*AVQAWC
Trigger: GCACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGC...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCATCTGGGAGCGGCGTTaGCGCACCAGCTTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: CPACSHCLAWVSPALCCFIWERR*RTSLSW
Trigger: CCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGAT...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGATCTGGGAGCGGCGTTaGCGCACCAGCTTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWIWERR*RTSLSW
Trigger: CCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGAT...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCATGTGGCGAGGCAGTTaGCCTGCCCCATGGATGATC +
Preference number: 5 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLMWRGS*PAPWMI
Trigger: GATCATCCATGGGGCAGGCAAACTGCCTCGCCACAT...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGTGCAGGTGGTCCTCCTaGGCGAAAGCCTTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLCRWSS*AKALWH
Trigger: GTGCCACAAGGCTTTCGCCAAGGAGGACCACCTGCA...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTGCAGGTGGTCCTCCTaGGCGAAAGCCTTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPCRWSS*AKALWH
Trigger: GTGCCACAAGGCTTTCGCCAAGGAGGACCACCTGCA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGGTGGTGCATCGTCCTaGCGGCGCCGTCGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGGGASS*RRRRVR
Trigger: GCGCACCCGACGGCGCCGCAAGGACGATGCACCACC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACTCTGTGCCCACTGCCTaGGCAAGGGGGCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYSVPTA*ARGRRS
Trigger: TGAGCGGCGCCCCCTTGCCAAGGCAGTGGGCACAGA...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAAGGAGGCGAGGGGAGTaGGCTGCTTCCCGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: KALVPSPHPLETRIAEVGRRRGE*AASRCC
Trigger: ACAGCACCGGGAAGCAGCCAACTCCCCTCGCCTCCT...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417934.6
CDS TCA 90 bp GAGCTTCTAGCCCACTGCCCTGCAGAATCTCCATGCAAGCAGCGATaGCACACGGGATCTCCAGCAGGCGGGCAGCCTGGAGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: ELLAHCPAESPCKQR*HTGSPAGGQPGAQL
Trigger: CAGCTGTGCTCCAGGCTGCCCGCCTGCTGGAGATCCCGTGTGTCATCGCTGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 90 bp CCTCCAGATACTGGCGGGCTCGCTCACAGTCATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGCCCTGCAGAATCTCCATGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: PPDTGGLAHSHPRPG*ELLAHCPAESPCKQ
Trigger: CTGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATGACTGTGAGCGAGCCCGCCAGTATCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS-3UTR CAA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGGACTGTCTTCACCATaGGGAACTCCAGAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLGLSSP*GTPEAV
Trigger: CACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTCC...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCTTTGCTCTGGCCCCCTaGGTTTGCAGGAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLFALAP*VCRKAF
Trigger: GAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAA...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWQGLGG*LWPPWF
Trigger: AAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTG...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCATGTGGCGAGGCAGTTaGCCTGCCCCATGGATGATC +
Preference number: 5 (lower is better)
Translates to: SHCLAWVSPALCCFSLALMWRGS*PAPWMI
Trigger: GATCATCCATGGGGCAGGCAAACTGCCTCGCCACAT...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGTCCTTGGCGAAAGCCTaGTGGCACAGGTGGCACTCA +
Preference number: 5 (lower is better)
Translates to: RAPTAWHGCPRPCAASVWSLAKA*WHRWHS
Trigger: TGAGTGCCACCTGTGCCACAAGGCTTTCGCCAAGGA...CCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTGCAGGTGGTCCTCCTaGGCGAAAGCCTTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRCRWSS*AKALWH
Trigger: GTGCCACAAGGCTTTCGCCAAGGAGGACCACCTGCA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTACTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: YRPSPPVFQASTWLSPTYWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...GTAGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp CAGCCTGGAGCACAGCTGGCATGTTGGCGCTGCTGGTGGTCAGTGTaGCTGTATAGGCAAATTCAAGGAGGGCGCCTAGTGCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: QPGAQLACWRCWWSV*LYRQIQGGRLVPLA
Trigger: GGCCAGAGGCACTAGGCGCCCTCCTTGAATTTGCCTATACAGCCACACTGACCACCAGCAGCGCCAACATGCCAGCTGTGCTCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 90 bp GCACCTGTGGAGGACTGTCTTCACCATTGGGAACTCCAGAGGCCGTaGCTGTGGCAAAGGCCTCCAGATACTGGCGGGCTCGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: APVEDCLHHWELQRP*LWQRPPDTGGLAHS
Trigger: ACTGTGAGCGAGCCCGCCAGTATCTGGAGGCCTTTGCCACAGCCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTCCTCCACAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 90 bp CCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTaGCCCTCGTCCCTCTTTAAGAGGACTCCATGGCACCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PTAWHGCPRPCAASV*PSSLFKRTPWHLQP
Trigger: AGGCTGAAGGTGCCATGGAGTCCTCTTAAAGAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGAAGCACAGCTGGCATGTaGGCGCTGCTGGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: KALVPSPHPLETRIAEVGSTAGM*ALLVVS
Trigger: ACTGACCACCAGCAGCGCCAACATGCCAGCTGTGCT...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCGTCCCTCTTTGCTCTGGCCCCCTaGGTTTGCAGGAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: AWHGCPRPCAASVWPSSLFALAP*VCRKAF
Trigger: GAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAA...GAGGGACGAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCACAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSPAGKDLGRGSLSHRSAQGLGG*LWPPWF
Trigger: AAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTG...TGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGAAGCCCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCTCCTTGGCGAAAGCCTaGTGGCACAGGTGGCACTCA +
Preference number: 5 (lower is better)
Translates to: RKPGWQGSGKGITFPQVRSLAKA*WHRWHS
Trigger: TGAGTGCCACCTGTGCCACAAGGCTTTCGCCAAGGA...GCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGGGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 90 bp TCACAGTCATCCTCGTCCGGGCTGGGAGCTTCTAGCCCACTGCCCTaGAGAATCTCCATGCAAGCAGCGATGACACACGGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SQSSSSGLGASSPLP*RISMQAAMTHGISS
Trigger: GCTGGAGATCCCGTGTGTCATCGCTGCTTGCATGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATGACTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 90 bp GTGGAGGACTGTCTTCACCATTGGGAACTCCAGAGGCCGTGGCTGTaGCAAAGGCCTCCAGATACTGGCGGGCTCGCTCACAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: VEDCLHHWELQRPWL*QRPPDTGGLAHSHP
Trigger: AGGATGACTGTGAGCGAGCCCGCCAGTATCTGGAGGCCTTTGCCACAGCCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS-3UTR CAA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTTCTGGCCCCCTTGGTTaGCAGGAAAGCTTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPSGPLG*QESFPG
Trigger: CCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGA...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AAGGCTTTGGTCCCAAGCCCCCACCCCCTAGAAACCCGCATAGCCGAAGTGGGACAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KALVPSPHPLETRIAEVGQGLGG*LWPPWF
Trigger: AAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTG...TCCCACTTCGGCTATGCGGGTTTCTAGGGGGTGGGGGCTTGGGACCAAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTCGTTTGCGCACCAGCTaGTCTTGGCTGTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPRLRTS*SWLSRP
Trigger: AGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACG...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTATCTGGGAGCGGCGTTaGCGCACCAGCTTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPIWERR*RTSLSW
Trigger: CCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGAT...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp AGGGGGCGCCGCTCACCAGCTGGGGTGGATGAGGAGCGTGAAGACAGCTCGCTCATGTGGATCTTCAGCTaGTCGTTCCTGGTGAATCGA +
Preference number: 5 (lower is better)
Translates to: RGRRSPAGVDEEREDSSLMWIFS*SFLVNR
Trigger: TCGATTCACCAGGAACGACAAGCTGAAGATCCACAT...GAGCGAGCTGTCTTCACGCTCCTCATCCACCCCAGCTGGTGAGCGGCGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CTTACAGGCCCAGTCCCCCAGTCTTTCAAGCTTCCACCTGGCTTTCCCCCACCTTGCAGGTGGTCCTCCTaGGCGAAAGCCTTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LTGPVPQSFKLPPGFPPPCRWSS*AKALWH
Trigger: GTGCCACAAGGCTTTCGCCAAGGAGGACCACCTGCA...AGGTGGGGGAAAGCCAGGTGGAAGCTTGAAAGACTGGGGGACTGGGCCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGVSRWP*ERSRPA
Trigger: CGCTGGCCTCGACCTCTCCAATGGCCACCTGGACAC...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTGGGTGTCCCCGGCCTaGTGCTGCTTCAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGWVSPA*CCFSLA
Trigger: GGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TCCCCCACCTACCCTTCCTTTGCCGGCCCCCTTTGCATAATTCACTGCCAGGAAATGTGGCGAGGCAGTTaGCCTGCCCCATGGATGATC +
Preference number: 5 (lower is better)
Translates to: SPTYPSFAGPLCIIHCQEMWRGS*PAPWMI
Trigger: GATCATCCATGGGGCAGGCAAACTGCCTCGCCACAT...TTCCTGGCAGTGAATTATGCAAAGGGGGCCGGCAAAGGAAGGGTAGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGATGTGGATCTTCAGCTaGTCGTTCCTGGTGAATCGA +
Preference number: 5 (lower is better)
Translates to: ACSHCLAWVSPALCCFSLMWIFS*SFLVNR
Trigger: TCGATTCACCAGGAACGACAAGCTGAAGATCCACAT...CAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCCGTTTGCGCACCAGCTaGTCTTGGCTGTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGRLRTS*SWLSRP
Trigger: AGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACG...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCAGTCTGGCCCTCTATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 5 (lower is better)
Translates to: SHCLAWVSPALCCFSLALYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...GAGGGCCAGACTGAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGTCCTGCGTGCTCCCACTGCTTGGCATGGGTGTCCCCGGCCTTGTGCTGCTTCTATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 5 (lower is better)
Translates to: CPACSHCLAWVSPALCCFYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...GAAGCAGCACAAGGCCGGGGACACCCATGCCAAGCAGTGGGAGCACGCAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp CCGGCTGGCAAGGATCTGGGAAGGGGATCACTTTCCCACAGGTCCGCAGCCCCTTATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 5 (lower is better)
Translates to: PAGKDLGRGSLSHRSAAPYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...AGGGGCTGCGGACCTGTGGGAAAGTGATCCCCTTCCCAGATCCTTGCCAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTTTGCTCTGGCCCCCTaGGTTTGCAGGAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGFALAP*VCRKAF
Trigger: GAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAGCGCACCAGCTTGTCTaGGCTGTCCAGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRAHQLV*AVQAWC
Trigger: GCACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGC...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp GGGAGCCTCTGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGATGTGGATCTTCAGCTaGTCGTTCCTGGTGAATCGA +
Preference number: 5 (lower is better)
Translates to: GSLCPNTFLAWNWNEGSGMWIFS*SFLVNR
Trigger: TCGATTCACCAGGAACGACAAGCTGAAGATCCACAT...CCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCAGAGGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 90 bp GAGTCAAGTAGAGGGGAGATTAAGAGCGCTCAGCCCACAGGGGTCTaGGGAAAGAGGACCAACTTTAGCCAATACTTATTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: ESSRGEIKSAQPTGV*GKRTNFSQYLLRDD
Trigger: GTCATCCCTCAATAAGTATTGGCTAAAGTTGGTCCTCTTTCCCCAGACCCCTGTGGGCTGAGCGCTCTTAATCTCCCCTCTACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS-3UTR CAA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAAGCACAGCTGGCATGTaGGCGCTGCTGGTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRSTAGM*ALLVVS
Trigger: ACTGACCACCAGCAGCGCCAACATGCCAGCTGTGCT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCATGTGGATCTTCAGCTaGTCGTTCCTGGTGAATCGA +
Preference number: 5 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGMWIFS*SFLVNR
Trigger: TCGATTCACCAGGAACGACAAGCTGAAGATCCACAT...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp ACAAGACCAACAGAAGAGGCTATGTACAGAATGGGGGTGGATTCAATCCTAAGAATGTGGCGAGGCAGTTaGCCTGCCCCATGGATGATC +
Preference number: 5 (lower is better)
Translates to: TRPTEEAMYRMGVDSILRMWRGS*PAPWMI
Trigger: GATCATCCATGGGGCAGGCAAACTGCCTCGCCACAT...TCTTAGGATTGAATCCACCCCCATTCTGTACATAGCCTCTTCTGTTGGTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS-3UTR CAA 90 bp TGCCCCAATACCTTCTTAGCTTGGAATTGGAATGAGGGCTCTGGGAGGAAGGGCTATATGTATCACTCCTaGGGGGATCACCCCAATTTG +
Preference number: 5 (lower is better)
Translates to: CPNTFLAWNWNEGSGRKGYMYHS*GDHPNL
Trigger: CAAATTGGGGTGATCCCCCAAGGAGTGATACATATA...GCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAGCTAAGAAGGTATTGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 90 bp TGGGGAAAGAGGACCAACTTTAGCCAATACTTATTGAGGGATGACTaGATGCCAGTCACCCTTCTGAGTACTTTACACTCATTTCATCTT +
Preference number: 5 (lower is better)
Translates to: WGKRTNFSQYLLRDD*MPVTLLSTLHSFHL
Trigger: AAGATGAAATGAGTGTAAAGTACTCAGAAGGGTGACTGGCATGCAGTCATCCCTCAATAAGTATTGGCTAAAGTTGGTCCTCTTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS TCA 90 bp CTGAGTACTTTACACTCATTTCATCTTCCAGAACCCTCTGAAGTATaGTCATCATCTGTTTCACAGACAAGGAAACTGAGGTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: LSTLHSFHLPEPSEV*SSSVSQTRKLRFRQ
Trigger: CTGTCTGAACCTCAGTTTCCTTGTCTGTGAAACAGATGATGATCATACTTCAGAGGGTTCTGGAAGATGAAATGAGTGTAAAGTACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS CCA 72 bp GGATGCAGCAGCGGTAGAGGGTGGTGGGTAGTGGGGTaGTGCATCGTCCTTGCGGCGCCGTCGGGTGCGCAC +
Preference number: 6 (lower is better)
Translates to: GCSSGRGWWVVG*CIVLAAPSGAH
Trigger: GTGCGCACCCGACGGCGCCGCAAGGACGATGCACCACCCCACTACCCACCACCCTCTACCGCTGCTGCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp GTCGAGGCCAGCGGGGGATGCAGCAGCGGTAGAGGGTaGTGGGTAGTGGGGTGGTGCATCGTCCTTGCGGCG +
Preference number: 6 (lower is better)
Translates to: VEASGGCSSGRG*WVVGWCIVLAA
Trigger: CGCCGCAAGGACGATGCACCACCCCACTACCCACCACCCTCTACCGCTGCTGCATCCCCCGCTGGCCTCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS TCA 72 bp GCCGTCGGGTGCGCACCTCCAGGCAGTTCTGGCCTTTaGGGTGGCGCTGCAGGTGGTCCTCCTTGGCGAAAG +
Preference number: 6 (lower is better)
Translates to: AVGCAPPGSSGL*GGAAGGPPWRK
Trigger: CTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAACTGCCTGGAGGTGCGCACCCGACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 72 bp CGAGCTAGAGAGAGGCGGAAGGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCGGGGGATGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: RARERRKVSRWP*ERSRPAGDAAA
Trigger: CGCTGCTGCATCCCCCGCTGGCCTCGACCTCTCCAATGGCCACCTGGACACCTTCCGCCTCTCTCTAGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 90 bp GGCACTGTGGGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTaGGTTTGCAGGAAAGCTTTCCGGGGCTTGCGGCTGCGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GTVGTSGTRWFALAP*VCRKAFRGLRLRRA
Trigger: TGCCCGCCGCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 72 bp TCAGGGACTAGGTGGTTTGCTCTGGCCCCCTTGGTTTaGAGGAAAGCTTTCCGGGGCTTGCGGCTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SGTRWFALAPLV*RKAFRGLRLRR
Trigger: CCGCCGCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS GCA 72 bp AGACAGGGCACTCCTGAGGCATCTGGGAGCGGCGTTTaGGCACCAGCTTGTCTTGGCTGTCCAGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RQGTPEASGSGV*APACLGCPGLV
Trigger: CACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp TCAAGGCCCTGCGTCCGGATGGTGAGGTCACATAGGTaGCCCAGCTGGCGCTGCTCATTGAGGCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SRPCVRMVRSHR*PSWRCSLRQLR
Trigger: CCTGAGCTGCCTCAATGAGCAGCGCCAGCTGGGCCACCTATGTGACCTCACCATCCGGACGCAGGGCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000461530.1
ENST00000487542.1
ENST00000535420.5
CDS CCA 72 bp ACTGGCGGGCTCGCTCACAGTCATCCTCGTCCGGGCTaGGAGCTTCTAGCCCACTGCCCTGCAGAATCTCCA +
Preference number: 6 (lower is better)
Translates to: TGGLAHSHPRPG*ELLAHCPAESP
Trigger: TGGAGATTCTGCAGGGCAGTGGGCTAGAAGCTCCCAGCCCGGACGAGGATGACTGTGAGCGAGCCCGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 72 bp CCTCCTCCTCATAGGTCAAGGGATGGGCGGGCACTGTaGGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PPPHRSRDGRAL*APQGLGGLLWP
Trigger: GGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATCCCTTGACCTATGAGGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 72 bp AGGCATCTGGGAGCGGCGTTTGCGCACCAGCTTGTCTaGGCTGTCCAGGCCTGGTGCCAGGTTGTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RHLGAAFAHQLV*AVQAWCQVVLV
Trigger: CACCAGGACAACCTGGCACCAGGCCTGGACAGCCAAGACAAGCTGGTGCGCAAACGCCGCTCCCAGATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 90 bp TCCCAGAATCGAGCTAGAGAGAGGCGGAAGGTGTCCAGGTGGCCATaGGAGAGGTCGAGGCCAGCGGGGGATGCAGCAGCGGTAGAGGGT +
Preference number: 6 (lower is better)
Translates to: SQNRARERRKVSRWP*ERSRPAGDAAAVEG
Trigger: ACCCTCTACCGCTGCTGCATCCCCCGCTGGCCTCGACCTCTCCAATGGCCACCTGGACACCTTCCGCCTCTCTCTAGCTCGATTCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 90 bp TCAAGGGATGGGCGGGCACTGTGGGCACCTCAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTTGCAGGAAAGCTTTCCGGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: SRDGRALWAPQGLGG*LWPPWFAGKLSGAC
Trigger: GCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS TCA 72 bp TGTGGGTGCGGTATTCAAGGCCCTGCGTCCGGATGGTaGGGTCACATAGGTGGCCCAGCTGGCGCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: CGCGIQGPASGW*GHIGGPAGAAH
Trigger: ATGAGCAGCGCCAGCTGGGCCACCTATGTGACCTCACCATCCGGACGCAGGGCCTTGAATACCGCACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000461530.1
ENST00000487542.1
ENST00000535420.5
CDS TCA 72 bp GCCCCATGGATGATCTTGTGGCAGACAGGGCACTCCTaGGGCATCTGGGAGCGGCGTTTGCGCACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: APWMILWQTGHS*GIWERRLRTSL
Trigger: CAAGCTGGTGCGCAAACGCCGCTCCCAGATGCCTCAGGAGTGCCCTGTCTGCCACAAGATCATCCATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp GCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTTaGTTTGCAGGAAAGCTTTCCGGGGCTTGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: APQGLGGLLWPP*FAGKLSGACGC
Trigger: GCAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp GGATGGGCGGGCACTGTGGGCACCTCAGGGACTAGGTaGTTTGCTCTGGCCCCCTTGGTTTGCAGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: GWAGTVGTSGTR*FALAPLVCRKA
Trigger: AGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp TCCAGGCAGTTCTGGCCTTTGAGGTGGCGCTGCAGGTaGTCCTCCTTGGCGAAAGCCTTGTGGCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: SRQFWPLRWRCR*SSLAKALWHRW
Trigger: CCACCTGTGCCACAAGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAAGGCCAGAACTGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp CAGAATCGAGCTAGAGAGAGGCGGAAGGTGTCCAGGTaGCCATTGGAGAGGTCGAGGCCAGCGGGGGATGCA +
Preference number: 6 (lower is better)
Translates to: QNRARERRKVSR*PLERSRPAGDA
Trigger: TGCATCCCCCGCTGGCCTCGACCTCTCCAATGGCCACCTGGACACCTTCCGCCTCTCTCTAGCTCGATTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 72 bp GGCACCTCAGGGACTAGGTGGTTTGCTCTGGCCCCCTaGGTTTGCAGGAAAGCTTTCCGGGGCTTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GTSGTRWFALAP*VCRKAFRGLRL
Trigger: CAGCCGCAAGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CAA 72 bp GGGCGGGCACTGTGGGCACCTCAGGGACTAGGTGGTTaGCTCTGGCCCCCTTGGTTTGCAGGAAAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: GRALWAPQGLGG*LWPPWFAGKLS
Trigger: GGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp GAGGACTGTCTTCACCATTGGGAACTCCAGAGGCCGTaGCTGTGGCAAAGGCCTCCAGATACTGGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: EDCLHHWELQRP*LWQRPPDTGGL
Trigger: GAGCCCGCCAGTATCTGGAGGCCTTTGCCACAGCCACGGCCTCTGGAGTTCCCAATGGTGAAGACAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000487542.1
ENST00000535420.5
CDS CCA 72 bp GCACTGTGGGCACCTCAGGGACTAGGTGGTTTGCTCTaGCCCCCTTGGTTTGCAGGAAAGCTTTCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: ALWAPQGLGGLL*PPWFAGKLSGA
Trigger: AGCCCCGGAAAGCTTTCCTGCAAACCAAGGGGGCCAGAGCAAACCACCTAGTCCCTGAGGTGCCCACAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp TTTAAGAGGACTCCATGGCACCTTCAGCCTGGGGTGTaGTGGGTGCCCCTTCCTCCTCATCGTCATCAGGGG +
Preference number: 6 (lower is better)
Translates to: FKRTPWHLQPGV*WVPLPPHRHQG
Trigger: CCCCTGATGACGATGAGGAGGAAGGGGCACCCACCACACCCCAGGCTGAAGGTGCCATGGAGTCCTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292176.2
ENST00000368426.3
ENST00000417934.6
ENST00000535420.5
CDS CCA 72 bp AGAGGGGAGATTAAGAGCGCTCAGCCCACAGGGGTCTaGGGAAAGAGGACCAACTTTAGCCAATACTTATTG +
Preference number: 6 (lower is better)
Translates to: RGEIKSAQPTGV*GKRTNFSQYLL
Trigger: CAATAAGTATTGGCTAAAGTTGGTCCTCTTTCCCCAGACCCCTGTGGGCTGAGCGCTCTTAATCTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS CAA 90 bp CCCACAGGGGTCTGGGGAAAGAGGACCAACTTTAGCCAATACTTATaGAGGGATGACTGCATGCCAGTCACCCTTCTGAGTACTTTACAC +
Preference number: 6 (lower is better)
Translates to: PTGVWGKRTNFSQYL*RDDCMPVTLLSTLH
Trigger: GTGTAAAGTACTCAGAAGGGTGACTGGCATGCAGTCATCCCTCAATAAGTATTGGCTAAAGTTGGTCCTCTTTCCCCAGACCCCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS CAA 72 bp GTCTGGGGAAAGAGGACCAACTTTAGCCAATACTTATaGAGGGATGACTGCATGCCAGTCACCCTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: VWGKRTNFSQYL*RDDCMPVTLLS
Trigger: ACTCAGAAGGGTGACTGGCATGCAGTCATCCCTCAATAAGTATTGGCTAAAGTTGGTCCTCTTTCCCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292176.2
CDS GCA 72 bp AGGACCAACTTTAGCCAATACTTATTGAGGGATGACTaGATGCCAGTCACCCTTCTGAGTACTTTACACTCA +
Preference number: 6 (lower is better)
Translates to: RTNFSQYLLRDD*MPVTLLSTLHS
Trigger: TGAGTGTAAAGTACTCAGAAGGGTGACTGGCATGCAGTCATCCCTCAATAAGTATTGGCTAAAGTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292176.2