RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB49 (Homo sapiens)

Ensembl gene IDs: ENSG00000168826

Ensembl transcript IDs: ENST00000337872.9, ENST00000502918.1, ENST00000503703.5, ENST00000504302.1, ENST00000511458.1, ENST00000515012.5

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGT +
Preference number: 1 (lower is better)
Translates to: GHRRGCPKQPERNGS*PCHRPAVVRHRLGC
Trigger: ACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 90 bp CGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATGGCCATaGCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACAT +
Preference number: 1 (lower is better)
Translates to: RRGCPKQPERNGSWP*HRPAVVRHRLGCPH
Trigger: ATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp ACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTG +
Preference number: 1 (lower is better)
Translates to: TDHGHAIGLQWFATG*GVHIRVSIGLRLCL
Trigger: CAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp AGCAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGTGTCCACATCCGAGTAAGCATAGGC +
Preference number: 1 (lower is better)
Translates to: SSQRGTDHGHAIGLQ*FATGWGVHIRVSIG
Trigger: GCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 90 bp CTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCAC +
Preference number: 1 (lower is better)
Translates to: LSSSSTSGLSSPALQ*IFLCRRSTAERVKH
Trigger: GTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp GAGGTCGGAGGTCTCGATGGCTTGGCTGAGCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCG +
Preference number: 1 (lower is better)
Translates to: EVGGLDGLAELLQHI*ALVTSFAVHLLVPP
Trigger: CGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCCGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp CTGAGCTCTGAGATTTCTCGAGGTCGGAGGTCTCGATGGCTTGGCTaGGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGT +
Preference number: 1 (lower is better)
Translates to: LSSEISRGRRSRWLG*APPAHLGSRHQLCS
Trigger: ACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp GGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTaGGATTTCTCGAGGTCGGAGGTCTCGATGGCTTGGCTGAGCTCC +
Preference number: 1 (lower is better)
Translates to: GISVTDVSWEKESEL*DFSRSEVSMAWLSS
Trigger: GGAGCTCAGCCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp GGGGAAACTGGGTCCTCCTACAGCCTTAACACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTGGTC +
Preference number: 1 (lower is better)
Translates to: GETGSSYSLNTSLLN*EHASTVEKRGTSLV
Trigger: GACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 90 bp AGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTaGCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATC +
Preference number: 1 (lower is better)
Translates to: STSGLSSPALQCIFL*RRSTAERVKHLLQI
Trigger: GATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 90 bp AAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTaGCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: KTDPLSSYKWWKMLD*PGGHRRGCPKQPER
Trigger: CCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp CGACACTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTaGGCTCTGAGATTTCTCGAGGTCGGAGGTCTCGATGGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: RHWHQRHRRVLGERV*ALRFLEVGGLDGLA
Trigger: AGCCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp GAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTaGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCA +
Preference number: 1 (lower is better)
Translates to: ESCWRKTDPLSSYKW*KMLDCPGGHRRGCP
Trigger: TGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTaGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGT +
Preference number: 1 (lower is better)
Translates to: RESCWRKTDPLSSYK*WKMLDCPGGHRRGC
Trigger: ACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp TTAAAAGGTTTCCCGCATAATTCACACGCGTATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCTTCCAGGGCAGCCGGGTCTTCAGGC +
Preference number: 1 (lower is better)
Translates to: LKGFPHNSHAYCLWD*SVWDWSSRAAGSSG
Trigger: GCCTGAAGACCCGGCTGCCCTGGAAGACCAGTCCCAGACACTTCAGTCCCAGAGACAATACGCGTGTGAATTATGCGGGAAACCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR GCA 90 bp CCGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTaGAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: PWRSAVHHWSNSFSF*SVFIASPQRVMLEK
Trigger: TTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp CCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTaGACAGGGAGTTTAACCGACACTGGCATCAGCGTCACAGACGTG +
Preference number: 1 (lower is better)
Translates to: PPEWLSNSATEFSTG*TGSLTDTGISVTDV
Trigger: CACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTaGGTGGACAGGGAGTTTAACCGACACTGGCATCAGCGTCACAGA +
Preference number: 1 (lower is better)
Translates to: GAARVAIKFCHRIFH*VDREFNRHWHQRHR
Trigger: TCTGTGACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTaGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTAC +
Preference number: 1 (lower is better)
Translates to: ASDYEPSSGGKLPIL*LVRRHCHGETGSSY
Trigger: GTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR CCA 90 bp TTTCATTCTGCAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTaGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATG +
Preference number: 1 (lower is better)
Translates to: FHSAASSSLAPRESC*RKTDPLSSYKWWKM
Trigger: CATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 90 bp ACTAAACCCTCGACCACAGATGTCACACAAGTGTGGTTTTTCTCCTaGGTGAATAATAATGTGACGCTGGACGTCGCCAGAGGCTGCAAA +
Preference number: 1 (lower is better)
Translates to: TKPSTTDVTQVWFFS*VNNNVTLDVARGCK
Trigger: TTTGCAGCCTCTGGCGACGTCCAGCGTCACATTATTATTCACTCAGGAGAAAAACCACACTTGTGTGACATCTGTGGTCGAGGGTTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR TCA 90 bp TGCTCTGCGTATTTCTGTGACTTCAGGAAATTGAGCTTCTTCAGATaGATGGCCTTTTTGAGCCTCATCTGCTTGACAGGTTGTTGGCAT +
Preference number: 1 (lower is better)
Translates to: CSAYFCDFRKLSFFR*MAFLSLICLTGCWH
Trigger: ATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR GCA 90 bp TCCAACCTCTTTGTCAAACCATCATCTGACTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGACTTCAGGAAATTGAGCTTCTTCAGA +
Preference number: 1 (lower is better)
Translates to: SNLFVKPSSDLGSDT*SAYFCDFRKLSFFR
Trigger: TCTGAAGAAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp TCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: STAQGVTAVVVQSSQRGTAIGLQ*FATGWG
Trigger: ACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGC...CGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp GGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCAAAGCCTTCGCTTCTGTaGCGTCAGCGCTCCCTCCCG +
Preference number: 2 (lower is better)
Translates to: GSWPCHRPAVVRHRLGCPKPSLL*RQRSLP
Trigger: CGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTT...TGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp GATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTA +
Preference number: 2 (lower is better)
Translates to: DARLPRGSPPWLSKAAREWFATG*GVHIRV
Trigger: TACTCGGATGTGGACACCCCAGCCGGTGGCGAACCA...CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 90 bp GCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTA +
Preference number: 2 (lower is better)
Translates to: AWLSSSSTSGLSSPA*QCIFLCRRSTAERV
Trigger: TACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp CAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACTTGGCATGTGGCGTCTaGCTCAGGGTGTGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QPERNGSWPCHRPAVVRHLACGV*LRVWGR
Trigger: TCTGCCCCACACCCTGAGTCAGACGCCACATGCCAA...GTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR GCA 90 bp TCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGGCCGCTCCCCCGTGTaGCGAATTCTGTGCTTTACT +
Preference number: 2 (lower is better)
Translates to: STAQGVTAVVVQSSQRGTGRSPV*RILCFT
Trigger: AGTAAAGCACAGAATTCGGCACACGGGGGAGCGGCC...CGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp AGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTG +
Preference number: 2 (lower is better)
Translates to: SQRGTDHGHAIGLQWFATTSLLN*EHASTV
Trigger: CACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGT...GGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp AGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGAATGCCGTCGTAAGTaGGTCTGCAAGTTACCTGCC +
Preference number: 2 (lower is better)
Translates to: SQRGTDHGHAIGLQWFATECRRK*VCKLPA
Trigger: GGCAGGTAACTTGCAGACTCACTTACGACGGCATTC...GGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp GGCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCAGGTTGTTGGCATGTaGCGTCTGACTCAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: GLAELLQHIWALVTSFAVQVVGM*RLTQGV
Trigger: CACACCCTGAGTCAGACGCCACATGCCAACAACCTG...CACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp GATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAGTTTAACCGACACTaGCATCAGCGTCACAGACGT +
Preference number: 2 (lower is better)
Translates to: DARLPRGSPPWLSKAAREEFNRH*HQRHRR
Trigger: ACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTC...CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 90 bp TCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTaGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAG +
Preference number: 2 (lower is better)
Translates to: SSTSGLSSPALQCIF*CRRSTAERVKHLLQ
Trigger: CTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR GCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGCTCCCTCCCGCGGCTaGCTCACGGTGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVAPSRG*LTVSQQ
Trigger: CTGCTGGCTCACCGTGAGGCAGCCGCGGGAGGGAGC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR-3UTR GCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAAGTTGGAAGGTAAGTaGTCGGGAGACTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: GHACGGHLIPQNISRRQSKLEGK*SGDSRM
Trigger: CATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTT...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp CTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCGGAGCACCGAAGCTACCTATTCTCTaGCTAGTTAGAAGGCACTGT +
Preference number: 2 (lower is better)
Translates to: LGSRHQLCSASSCAAGAPKLPIL*LVRRHC
Trigger: ACAGTGCCTTCTAACTAGCCAGAGAATAGGTAGCTT...CGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp CGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: RGEARYITGLTRFHSAASERNGS*PCHRPA
Trigger: TGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTC...AGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRRMHSE*LTAQGW
Trigger: CCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCT...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR GCA 90 bp CACCGGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTTTTTTGAGCCTCATCTaGTTGACAGGTTGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: HRLGCPHPSKHRPEAVSAFLSLI*LTGCWH
Trigger: ATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAA...AGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGGAGTGCGGACATGCCTaGGGAGGTCACCTGATCCCC +
Preference number: 2 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRECGHA*GGHLIP
Trigger: GGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp GCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTAGCTGGGCCAGGAAGTTaGAAGGTAAGTGCTCGGGAG +
Preference number: 2 (lower is better)
Translates to: ARYITGLTRFHSAASSSLAGPGS*KVSARE
Trigger: CTCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGC...TAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp CGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: RGEARYITGLTRFHSAASLLQHI*ALVTSF
Trigger: AAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAG...AGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CCA 90 bp AAGCAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCATGAGGTTGGATCATaGACCGTAACTTACAATAGG +
Preference number: 2 (lower is better)
Translates to: KQPERNGSWPCHRPAVVRHEVGS*TVTYNR
Trigger: CCTATTGTAAGTTACGGTCCATGATCCAACCTCATG...GCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCTGCATTCAGAATGACTaGCGGCACAAGGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTCIQND*RHKAGS
Trigger: AGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCA...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR GCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAATCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGG +
Preference number: 2 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQSPALQ*IFLCRR
Trigger: CCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGA...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp CGTTTTCATTCTGCAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGACACACTCATCACAGGTaGAGACTTTATCAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: RFHSAASSSLAPRESCWRHTHHR*RLYQPC
Trigger: ACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTG...TCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGGAGGTCTCGATGGCTTaGCTGAGCTCCTCCAGCACA +
Preference number: 2 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKEVSMA*LSSSST
Trigger: TGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTC...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTG +
Preference number: 2 (lower is better)
Translates to: DASDYEPSSGGKLPILWLTSLLN*EHASTV
Trigger: CACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGT...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTG +
Preference number: 2 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVTSLLN*EHASTV
Trigger: CACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGT...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR-3UTR TCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGATGCTTCAGATTATaGGCCATCATCAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: GAARVAIKFCHRIFHWVDRCFRL*AIIRRE
Trigger: TTCCCTCCTGATGATGGCTCATAATCTGAAGCATCT...GTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR TCA 90 bp TGCCACAGAATTTTCCACTGGGTGGACAGGGAGTTTAACCGACACTGGCATCAGAACATGTACAGTAGTTaGCACGATGCACACGCGCTT +
Preference number: 2 (lower is better)
Translates to: CHRIFHWVDREFNRHWHQNMYSS*HDAHAL
Trigger: AAGCGCGTGTGCATCGTGTCAACTACTGTACATGTT...CTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR TCA 90 bp TGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTAACTTATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCT +
Preference number: 2 (lower is better)
Translates to: WGLASLPGSKLSFSWSLTYCLWD*SVWDWS
Trigger: AGACCAGTCCCAGACACTTCAGTCCCAGAGACAATA...AGTTAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR TCA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTTGGTCACTAACTCCATaGGGTTGGATCATGGACCGT +
Preference number: 2 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIAWSLTP*GWIMDR
Trigger: ACGGTCCATGATCCAACCTCATGGAGTTAGTGACCA...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR GCA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTTCTCGTCACCAGCTTTaGAGTGCATCTTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIASRHQL*SASSCA
Trigger: GGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGA...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR TCA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTCACACTCATCACAGGTaGAGACTTTATCAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIAHTHHR*RLYQPC
Trigger: ACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTG...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CCA 90 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCTTGACAGGTTGTTaGCATGTGGCGTCTGACTCA +
Preference number: 2 (lower is better)
Translates to: CWRKTDPLSSYKWWKMLDCLTGC*HVASDS
Trigger: TGAGTCAGACGCCACATGCCAACAACCTGTCAAGCA...GTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR TCA 90 bp GCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGGTGACTTCAGGAAATTaGGCTTCTTCAGATGAATGG +
Preference number: 2 (lower is better)
Translates to: APRESCWRKTDPLSSYKWVTSGN*ASSDEW
Trigger: CCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCAC...CCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGGAGTTTAACCGACACTaGCATCAGCGTCACAGACGT +
Preference number: 2 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKEFNRH*HQRHRR
Trigger: ACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTC...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CCA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTTTTTCTTCAGCACTTTaGCTGCTAGCTTTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIAFSSAL*LLAFSR
Trigger: CCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAA...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR GCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGTGTGCCGAATTCTGTaGTTTACTAACTTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVVCRIL*FTNFLC
Trigger: GCAAAGGAAGTTAGTAAAGCACAGAATTCGGCACAC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCATGAGGTTGGATCATaGACCGTAACTTACAATAGG +
Preference number: 2 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRHEVGS*TVTYNR
Trigger: CCTATTGTAAGTTACGGTCCATGATCCAACCTCATG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR CAA 90 bp TTTTTACTAGCAGATTCCAACCTCTTTGTCAAACCATCATCTGACTaGGGTTCAGATACTTGCTCTGCGTATTTCTGTGACTTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FLLADSNLFVKPSSD*GSDTCSAYFCDFRK
Trigger: TTTCCTGAAGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTGCTAGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR GCA 72 bp CTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCTaGCTCACGGTGAGCCAGCAGGCCCTCCCCCTCACA +
Preference number: 3 (lower is better)
Translates to: LRFCDVSAPSRG*LTVSQQALPLT
Trigger: TGTGAGGGGGAGGGCCTGCTGGCTCACCGTGAGGCAGCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR GCA 72 bp GCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTaGAGTGGTTCGCCACCGGCTGGGGTGTCCACATCC +
Preference number: 3 (lower is better)
Translates to: AREERIMAMPSA*SGSPPAGVSTS
Trigger: GGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp GGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: GHAIGLQWFATG*GVHIRVSIGLR
Trigger: CCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp TGTCCAAAGCAGCCAGAGAGGAACGGATCATGGCCATaGCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: CPKQPERNGSWP*HRPAVVRHRLG
Trigger: CCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CAA 90 bp TGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACATCCGAGTAAGGGCTGGGCCAGGAAGTaGGAAGGTAAGTGCTCGGGA +
Preference number: 3 (lower is better)
Translates to: CHRPAVVRHRLGCPHPSKGWARK*EGKCSG
Trigger: TCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGCC...CTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR GCA 72 bp TCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGG +
Preference number: 3 (lower is better)
Translates to: SSTSGLSSPALQ*IFLCRRSTAER
Trigger: CCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp GCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTaGAGTGCATCTTCTTGTGCCGCCGGAGCACCGCAG +
Preference number: 3 (lower is better)
Translates to: APPAHLGSRHQL*SASSCAAGAPQ
Trigger: CTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp AGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGTGTCCACATCCGAGTA +
Preference number: 3 (lower is better)
Translates to: RGTDHGHAIGLQ*FATGWGVHIRV
Trigger: TACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp CGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGG +
Preference number: 3 (lower is better)
Translates to: RGCPKQPERNGS*PCHRPAVVRHR
Trigger: CCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp CCCAGTGTGAGTGCGGACATGCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCCGCAGGCAGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PSVSADMPAEVT*SPKTFPAGRAA
Trigger: AGCTGCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTCACACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp GGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTaGCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTG +
Preference number: 3 (lower is better)
Translates to: GLSSPALQCIFL*RRSTAERVKHL
Trigger: CAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp GTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTaGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATG +
Preference number: 3 (lower is better)
Translates to: VEDARLPRGSPP*LSKAAREERIM
Trigger: CATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CAA 90 bp GATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGCTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGC +
Preference number: 3 (lower is better)
Translates to: DARLPRGSPPWLSKAARELSSPA*QCIFLC
Trigger: GCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAG...CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp CCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTaGCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: PLSSYKWWKMLD*PGGHRRGCPKQ
Trigger: CTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp GGGTCCTCCTACAGCCTTAACACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTGGAGAAGCGCGGTACA +
Preference number: 3 (lower is better)
Translates to: GSSYSLNTSLLN*EHASTVEKRGT
Trigger: TGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGTGTTAAGGCTGTAGGAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp TTCCCGCATAATTCACACGCGTATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCTTCCAGGGCAGCCGGG +
Preference number: 3 (lower is better)
Translates to: FPHNSHAYCLWD*SVWDWSSRAAG
Trigger: CCCGGCTGCCCTGGAAGACCAGTCCCAGACACTTCAGTCCCAGAGACAATACGCGTGTGAATTATGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR CCA 72 bp GGTCTCGATGGCTTGGCTGAGCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTT +
Preference number: 3 (lower is better)
Translates to: GLDGLAELLQHI*ALVTSFAVHLL
Trigger: AAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp CCCAGTGTGAGTGCGGACATGCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCCTCTTTCCACAGATCT +
Preference number: 3 (lower is better)
Translates to: PSVSADMPAEVT*SPKTFPSFHRS
Trigger: AGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTCACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
3UTR CCA 72 bp ATGGCCTTTTTGAGCCTCATCTGCTTGACAGGTTGTTaGCATGTGGCGTCTGACTCAGGGTGTGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: MAFLSLICLTGC*HVASDSGCGAE
Trigger: CTCTGCCCCACACCCTGAGTCAGACGCCACATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAAGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR CCA 72 bp TGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTaGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGT +
Preference number: 3 (lower is better)
Translates to: WRKTDPLSSYKW*KMLDCPGGHRR
Trigger: ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTaGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGC +
Preference number: 3 (lower is better)
Translates to: CWRKTDPLSSYK*WKMLDCPGGHR
Trigger: GCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp GTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTaGGATTTCTCGAGGTCGGAGGTCTCGATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: VTDVSWEKESEL*DFSRSEVSMAW
Trigger: CCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp CCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTaGGTTCCTATAAGTGGTGGAAGATGCTCGACTGCC +
Preference number: 3 (lower is better)
Translates to: PPESHAGEKLTL*VPISGGRCSTA
Trigger: GGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTaGAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATG +
Preference number: 3 (lower is better)
Translates to: SAVHHWSNSFSF*SVFIASPQRVM
Trigger: CATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp GCAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTaGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGG +
Preference number: 3 (lower is better)
Translates to: AASSSLAPRESC*RKTDPLSSYKW
Trigger: CCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR GCA 72 bp TCTGCAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATaGTGGAGAAAAACTGACCCTCTGAGTTCCTATAAG +
Preference number: 3 (lower is better)
Translates to: SAASSSLAPRES*WRKTDPLSSYK
Trigger: CTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp ATTTTCCACTGGGTGGACAGGGAGTTTAACCGACACTaGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: IFHWVDREFNRH*HQRHRRVLGER
Trigger: TCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp AACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTaGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATC +
Preference number: 3 (lower is better)
Translates to: NTPLPWRSAVHH*SNSFSFCSVFI
Trigger: GATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR-3UTR CAA 90 bp ATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTATTGAGCCTCATCTGCTaGACAGGTTGTTGGCATGTG +
Preference number: 3 (lower is better)
Translates to: IWGLASLPGSKLSFSWSLLSLIC*TGCWHV
Trigger: CACATGCCAACAACCTGTCAAGCAGATGAGGCTCAA...TAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR CCA 72 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTaGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGG +
Preference number: 3 (lower is better)
Translates to: YEPSSGGKLPIL*LVRRHCHGETG
Trigger: CCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR GCA 72 bp CTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTaGCACAGAATTTTCCACTGGGTGGACAGGGAGTTT +
Preference number: 3 (lower is better)
Translates to: LTIGAARVAIKF*HRIFHWVDREF
Trigger: AAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CCA 72 bp AGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTaGGTGGACAGGGAGTTTAACCGACACTGGCATCAG +
Preference number: 3 (lower is better)
Translates to: RVAIKFCHRIFH*VDREFNRHWHQ
Trigger: CTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR TCA 72 bp CAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTaGGTCTGCAAGTTACCTGCCTGTATGAGACCGTTT +
Preference number: 3 (lower is better)
Translates to: QMYGFSPECRRK*VCKLPACMRPF
Trigger: AAACGGTCTCATACAGGCAGGTAACTTGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR-3UTR CAA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGAAACCATCATCTGACTaGGGTTCAGATACTTGCTCT +
Preference number: 3 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKKPSSD*GSDTCS
Trigger: AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTT...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR TCA 72 bp ACTAGCAGATTCCAACCTCTTTGTCAAACCATCATCTaGCTTGGGTTCAGATACTTGCTCTGCGTATTTCTG +
Preference number: 3 (lower is better)
Translates to: TSRFQPLCQTII*LGFRYLLCVFL
Trigger: CAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTGCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR CCA 72 bp CAGATTCCAACCTCTTTGTCAAACCATCATCTGACTTaGGTTCAGATACTTGCTCTGCGTATTTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: QIPTSLSNHHLT*VQILALRISVT
Trigger: AGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
3UTR GCA 72 bp TTTGTCAAACCATCATCTGACTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGACTTCAGGAAATTGAGC +
Preference number: 3 (lower is better)
Translates to: FVKPSSDLGSDT*SAYFCDFRKLS
Trigger: GCTCAATTTCCTGAAGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCGCTCCCTCCCGCGGCTaGCTCACGGTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGAPSRG*LTVSQQ
Trigger: CTGCTGGCTCACCGTGAGGCAGCCGCGGGAGGGAGC...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCGGCTTCTCCCCAGTGTaGGTGCGGACATGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGGFSPV*VRTCLR
Trigger: CCGCAGGCATGTCCGCACTCACACTGGGGAGAAGCC...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACATCCGAGTAAGGCTCAACCATTCAGGTaGCCCTCGGAGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: CHRPAVVRHRLGCPHPSKAQPFR*PSEAAL
Trigger: GAGAGCGGCCTCCGAGGGTCACCTGAATGGTTGAGC...CTTACTCGGATGTGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCGGAGCACCGCAGCCATGCCATCGGCCTaGAGTGGTTCGCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: GLSSPALQCIFLCRRSTAAMPSA*SGSPPA
Trigger: AGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGC...TGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSAIGLQ*FATGWG
Trigger: ACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGC...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLAELLQHIWALVTSFAVAIGLQ*FATGWG
Trigger: ACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGC...CACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACGCCTACTCTTCACCTaGAGCAGCTGCCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GSWPCHRPAVVRHRLGCPRLLFT*SSCLQG
Trigger: GCCTTGAAGGCAGCTGCTGCAGGTGAAGAGTAGGCG...TGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCAGTGCATCTTCTTGTaGCGCCGGAGCACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGQCIFL*RRSTAE
Trigger: CTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAGCTGGCCATGCCATCGGCCTaGAGTGGTTCGCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPQAEQLAMPSA*SGSPPA
Trigger: AGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGC...CAGCTGCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGGCGGCTGCCTCACGGTaGGCCAGCAGGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: APRESCWRKTDPLSSYKWAAASR*ASRPSP
Trigger: GGGGGAGGGCCTGCTGGCTCACCGTGAGGCAGCCGC...CCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCGCTGCTCATGCAGTTaGTGGAGCAGATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGRCSCS*WSRWQL
Trigger: CAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGTGCGGACATGCCTaGGGAGGTCACCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: VRTCLRRSPDPPKHFPQAECGHA*GGHLIP
Trigger: GGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC...TGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCTGACGGCACAAGGCTaGCTCTCTACCGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGLTAQG*LSTVVR
Trigger: CCTTACCACGGTAGAGAGCCAGCCTTGTGCCGTCAG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACAGGTTGTTGGCATGTaGCGTCTGACTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSWPCHRPAVVRHRLGCPQVVGM*RLTQGV
Trigger: CACACCCTGAGTCAGACGCCACATGCCAACAACCTG...TGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: STAQGVTAVVVQSSQRGTERNGS*PCHRPA
Trigger: TGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTC...CGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 72 bp GAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTaGTCCAAAGCAGCCAGAGAGGAACGGATCATGGCC +
Preference number: 4 (lower is better)
Translates to: EDARLPRGSPPW*SKAAREERIMA
Trigger: GGCCATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAGCTGTTGGCATGTGGCGTCTaGCTCAGGGTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPQAEQLLACGV*LRVWGR
Trigger: TCTGCCCCACACCCTGAGTCAGACGCCACATGCCAA...CAGCTGCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp AAGCAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCAGTGCATCTTCTTGTaGCGCCGGAGCACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: KQPERNGSWPCHRPAVVRQCIFL*RRSTAE
Trigger: CTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTG...GCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATGCTGACGGCACAAGGCTaGCTCTCTACCGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PRGSPPWLSKAAREERIMLTAQG*LSTVVR
Trigger: CCTTACCACGGTAGAGAGCCAGCCTTGTGCCGTCAG...CATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCAGGTTGTTGGCATGTaGCGTCTGACTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGQVVGM*RLTQGV
Trigger: CACACCCTGAGTCAGACGCCACATGCCAACAACCTG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGLLQHI*ALVTSF
Trigger: AAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CACCGGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTAGGGGGTCACCGCCGTaGTTGTCCAAAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HRLGCPHPSKHRPEAVSARGSPP*LSKAAR
Trigger: TCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCT...AGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 72 bp TCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTaGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SGLSSPALQCIF*CRRSTAERVKH
Trigger: GTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 72 bp AGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGCCGCCGGAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: SSSSTSGLSSPA*QCIFLCRRSTA
Trigger: TGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCACCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCC +
Preference number: 4 (lower is better)
Translates to: VRTCLRRSPDPPKHFPQAPAEVT*SPKTFP
Trigger: GGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGG...TGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGTCGGAGGCCGCTCTCTaGCCCGCCGCCTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: ASSSLAPRESCWRKTDPLSEAAL*PAAYSS
Trigger: TGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCCGA...CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGACGTCGCCAGAGGCTaGAAACCTCTTTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: DARLPRGSPPWLSKAAREDVARG*KPLSTD
Trigger: ATCTGTGGAAAGAGGTTTGCAGCCTCTGGCGACGTC...CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAGCTGGGCCGCTCCCCCGTGTaGCGAATTCTGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPQAEQLGRSPV*RILCFT
Trigger: AGTAAAGCACAGAATTCGGCACACGGGGGAGCGGCC...CAGCTGCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACTCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QPERNGSWPCHRPAVVRHSPALQ*IFLCRR
Trigger: CCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGA...GTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGCTCCCTCCCGCGGCTaGCTCACGGTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTAPSRG*LTVSQQ
Trigger: CTGCTGGCTCACCGTGAGGCAGCCGCGGGAGGGAGC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACTGCTCATGCAGTTGCTaGAGCAGATGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPERNGSWPCHRPAVVRHCSCSC*SRWQLW
Trigger: CCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCA...GTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGCTGGGCCAGGAAGTTaGAAGGTAAGTGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VRTCLRRSPDPPKHFPQAAGPGS*KVSARE
Trigger: CTCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGC...TGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCACCCAGAGAGTCATGCTaGAGAAAAACTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSWPCHRPAVVRHRLGCPPRESC*RKTDPL
Trigger: CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGG...TGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp AGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCAACACGCCTCTACCGTaGAGAAGCGCGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: SQRGTDHGHAIGLQWFATNTPLP*RSAVHH
Trigger: GTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTT...GGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
3UTR CAA 72 bp GCTCTGAGATTTCTCGAGGTCGGAGGTCTCGATGGCTaGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: ALRFLEVGGLDG*AELLQHIWALV
Trigger: GACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCCGACCTCGAGAAATCTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTCTCGAGGTCGGAGGGGCTTCTCCCCAGTGTaGGTGCGGACATGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QTCLGRKSLSSEISRGRRGFSPV*VRTCLR
Trigger: CCGCAGGCATGTCCGCACTCACACTGGGGAGAAGCC...CCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGGCGGCTGCCTCACGGTaGGCCAGCAGGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRAAASR*ASRPSP
Trigger: GGGGGAGGGCCTGCTGGCTCACCGTGAGGCAGCCGC...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTTCGGAGGCCGCTCTCTaGCCCGCCGCCTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLSEAAL*PAAYSS
Trigger: TGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCCGA...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGATGGATTCGCTGCTCATaGAGTTGCTGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: EDARLPRGSPPWLSKAARWIRCS*SCWSRW
Trigger: CCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCA...TCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ACTGAGAACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGGAGTGCGGACATGCCTaGGGAGGTCACCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: TENTPLPWRSAVHHWSNSECGHA*GGHLIP
Trigger: GGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC...CGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGCTCGCAGCGATCCGCTaGCCGCGGAATCATCACGAC +
Preference number: 4 (lower is better)
Translates to: ASSSLAPRESCWRKTDPLLAAIR*PRNHHD
Trigger: GTCGTGATGATTCCGCGGCCAGCGGATCGCTGCGAG...CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGCCATCGGCCTGCAGTaGTTCGCCACCGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTAIGLQ*FATGWG
Trigger: ACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGTGAGTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCC +
Preference number: 4 (lower is better)
Translates to: CECGHACGGHLIPQNISLPAEVT*SPKTFP
Trigger: GGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGG...GAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTGGCTTCTCCCCAGTGTaGGTGCGGACATGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LASASQTCLGRKSLSSEIGFSPV*VRTCLR
Trigger: CCGCAGGCATGTCCGCACTCACACTGGGGAGAAGCC...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTTCTCCCCAGTGTGAGTaGGGACATGCCTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TDPLSSYKWWKMLDCPGGSPQCE*GHACGG
Trigger: ACCTCCGCAGGCATGTCCGCACTCACACTGGGGAGA...ACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTAACGGATCATGGCCATaGCATCGGCCTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSSYKWWKMLDCPGGHRRNGSWP*HRPAVV
Trigger: AACCACTGCAGGCCGATGGCATGGCCATGATCCGTT...ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGTGGAAGATGCTCGACTaGCCAGGGGGTCACCGCCGT +
Preference number: 4 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRWKMLD*PGGHRR
Trigger: ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAAGTTGCTGGAGCAGATaGCAGCTGTGGGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: VRTCLRRSPDPPKHFPQASCWSR*QLWVAT
Trigger: TGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACT...TGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCAACTCTCTCCTGACTaGGACCAGCTGCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: QPERNGSWPCHRPAVVRHQLSPD*DQLRVY
Trigger: ATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTG...GTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PLSSYKWWKMLDCPGGHRLLQHI*ALVTSF
Trigger: AAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAG...GCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGAGTTCCTATAAGTGGTaGAAGATGCTCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: DARLPRGSPPWLSKAARESSYKW*KMLDCP
Trigger: TGGGCAGTCGAGCATCTTCCACCACTTATAGGAACT...CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCATGTGCAGCTGCCATCTaGAGTATCAGGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: WKMLDCPGGHRRGCPKQPCAAAI*SIRSLF
Trigger: AAACAAGCTCCTGATACTTCAGATGGCAGCTGCACA...TGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATCTGGGTGCATTCAGAATGACTaGCGGCACAAGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCPHPSKHRPEAVSAASGCIQND*RHKAGS
Trigger: AGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCA...CCCAGATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCTGCAAGTTACCTGCCTaGGAGAAATGTTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGCKLPA*EKCFPQ
Trigger: TTGTGGGAAACATTTCTCTCAGGCAGGTAACTTGCA...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR TCA 90 bp CCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCGAATGCCGTCGTAAGTaGGTCTGCAAGTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: PAHLGSRHQLCSASSCAAECRRK*VCKLPA
Trigger: GGCAGGTAACTTGCAGACTCACTTACGACGGCATTC...GGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp TCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGATGAAGTCCAGGATCTaGCCTATGCCACTGACATTT +
Preference number: 4 (lower is better)
Translates to: STAQGVTAVVVQSSQRGTMKSRI*PMPLTF
Trigger: AAATGTCAGTGGCATAGGGCAGATCCTGGACTTCAT...CGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR GCA 90 bp CCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGGATCATGGGTGAAGCATGCGGATaGGATTCATCCAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: PRGSPPWLSKAAREERIMGEACG*DSSNVL
Trigger: CAAAACGTTGGATGAATCGCATCCGCATGCTTCACC...CATGATCCGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAACTGATGGTGAAGCATaGGGATGCGATTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: EDARLPRGSPPWLSKAARTDGEA*GCDSSN
Trigger: GTTGGATGAATCGCATCCGCATGCTTCACCATCAGT...TCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACACTGATGGTGAAGCATaGGGATGCGATTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: QPERNGSWPCHRPAVVRHTDGEA*GCDSSN
Trigger: GTTGGATGAATCGCATCCGCATGCTTCACCATCAGT...GTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCCTGACTGGGACCAGCTaGGTGTTTATGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSLTGTS*VFMVLL
Trigger: AAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAG...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGAGTGCGGACATGCCTaGGGAGGTCACCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTECGHA*GGHLIP
Trigger: GGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp ACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATGAGTGCGGACATGCCTaGGGAGGTCACCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: TCLRRSPDPPKHFPLSTDECGHA*GGHLIP
Trigger: GGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC...ATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR GCA 90 bp GGCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGTCTCGTCACCAGCTTTaGAGTGCATCTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GLAELLQHIWALVTSFAVSRHQL*SASSCA
Trigger: GGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGA...CACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAATAAGTGGTGGAAGATaGTCGACTGCCCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTISGGR*STAQGV
Trigger: GACCCCCTGGGCAGTCGAGCATCTTCCACCACTTAT...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCAGTTGCTGGAGCAGATaGCAGCTGTGGGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: PLSSYKWWKMLDCPGGHRSCWSR*QLWVAT
Trigger: TGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACT...GCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TGGTCTTCCAGGGCAGCCGGGTCTTCAGGCCTCTCCGTCTCACTAATGCAATTAGCTGGGCCAGGAAGTTaGAAGGTAAGTGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: WSSRAAGSSGLSVSLMQLAGPGS*KVSARE
Trigger: CTCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGC...TAATTGCATTAGTGAGACGGAGAGGCCTGAAGACCCGGCTGCCCTGGAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCACAGAATTTTCCACTaGGTGGACAGGGAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGHRIFH*VDREFN
Trigger: GTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCTGTGTCTGCTGCATCTaGGGCTTGGCAAGTTTACCA +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSCVCCI*GLASLP
Trigger: TGGTAAACTTGCCAAGCCCCAGATGCAGCAGACACA...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRWFATG*GVHIRV
Trigger: TACTCGGATGTGGACACCCCAGCCGGTGGCGAACCA...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGAGGGGGTCACCGCCGTaGTTGTCCAAAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRRGSPP*LSKAAR
Trigger: TCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCT...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCAGCGCGGTACATCACTaGTCTAACTCGTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGSAVHH*SNSFSF
Trigger: GAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAAGTAATTTGGCTGTTTaGAAGGCAGTTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WKMLDCPGGHRRGCPKQPSNLAV*KAVLCS
Trigger: GCTGCACAGAACTGCCTTTCAAACAGCCAAATTACT...TGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCGAATGCCGTCGTAAGTaGGTCTGCAAGTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: VRTCLRRSPDPPKHFPLSECRRK*VCKLPA
Trigger: GGCAGGTAACTTGCAGACTCACTTACGACGGCATTC...GGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp CTGCAAGTTACCTGCCTGTATGAGACCGTTTGTGAAGCTCCAAGTTGCTTGGGTAAGCCTTCGCTTCTGTaGCGTCAGCGCTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LQVTCLYETVCEAPSCLGKPSLL*RQRSLP
Trigger: CGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTT...ACCCAAGCAACTTGGAGCTTCACAAACGGTCTCATACAGGCAGGTAACTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp CAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTCTCGAGGTCGGAGGCGCTGCTCATGCAGTTaGTGGAGCAGATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QTCLGRKSLSSEISRGRRRCSCS*WSRWQL
Trigger: CAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCG...CCTCCGACCTCGAGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTAGGCCTTGGATTCGCTaGTCATGCAGTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TDPLSSYKWWKMLDCPGGRPWIR*SCSCWS
Trigger: GCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCT...ACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCAACTTGCAAACACTGTaGTGTGTCCAGCATTACTTG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGNLQTL*CVQHYL
Trigger: CAAGTAATGCTGGACACAGCACAGTGTTTGCAAGTT...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp GGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATCTGGGGCAGTTCTGTGCAGCTaGCATCTGAAGTATCAGGAG +
Preference number: 4 (lower is better)
Translates to: GCPHPSKHRPEAVSAASGAVLCS*HLKYQE
Trigger: CTCCTGATACTTCAGATGGCAGCTGCACAGAACTGC...CCCAGATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCGTGTGCCGAATTCTGTaGTTTACTAACTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGVCRIL*FTNFLC
Trigger: GCAAAGGAAGTTAGTAAAGCACAGAATTCGGCACAC...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTCTCCCCAGTGTGAGTaGGGACATGCCTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LASASQTCLGRKSLSSEISPQCE*GHACGG
Trigger: ACCTCCGCAGGCATGTCCGCACTCACACTGGGGAGA...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATCATAAGTGGTGGAAGATaGTCGACTGCCCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: IFLCRRSTAERVKHLLQIISGGR*STAQGV
Trigger: GACCCCCTGGGCAGTCGAGCATCTTCCACCACTTAT...GATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATTCACAAAGCAGGCCTTaGATTCGCTGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: GWGVHIRVSIGLRLCLLHSQSRP*IRCSCS
Trigger: ACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGA...ATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAGGCTCCTAAAATACTaGCTGAATGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSRLLKY*LNAART
Trigger: TGTCCTGGCAGCATTCAGCCAGTATTTTAGGAGCCT...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR CCA 90 bp CCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCAACTCTCTCCTGACTaGGACCAGCTGCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: PLSSYKWWKMLDCPGGHRQLSPD*DQLRVY
Trigger: ATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTG...GCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTGAGGTCTCGATGGCTTaGCTGAGCTCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLEVSMA*LSSSST
Trigger: TGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTC...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGTCACAGACGTGTCTTaGGAGAAAGAGTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSYKWWKMLDCPGGHRRVTDVS*EKESEL
Trigger: GAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGAC...ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp AGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCCACAGAATTTTCCACTaGGTGGACAGGGAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SQRGTDHGHAIGLQWFATHRIFH*VDREFN
Trigger: GTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTG...GGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCATGAGGTTGGATCATaGACCGTAACTTACAATAGG +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGHEVGS*TVTYNR
Trigger: CCTATTGTAAGTTACGGTCCATGATCCAACCTCATG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTWFATG*GVHIRV
Trigger: TACTCGGATGTGGACACCCCAGCCGGTGGCGAACCA...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLERNGS*PCHRPA
Trigger: TGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTC...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCAAGCTACCTATTCTCTaGCTAGTTAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AETASSLRFCDVSAPSRGKLPIL*LVRRHC
Trigger: ACAGTGCCTTCTAACTAGCCAGAGAATAGGTAGCTT...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACGCTCAACCATTCAGGTaGCCCTCGGAGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: CWRKTDPLSSYKWWKMLDAQPFR*PSEAAL
Trigger: GAGAGCGGCCTCCGAGGGTCACCTGAATGGTTGAGC...GTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATTGTGCAGCTGCCATCTaGAGTATCAGGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GWGVHIRVSIGLRLCLLHCAAAI*SIRSLF
Trigger: AAACAAGCTCCTGATACTTCAGATGGCAGCTGCACA...ATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGAGTAATTTGGCTGTTTaGAAGGCAGTTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLAELLQHIWALVTSFAVSNLAV*KAVLCS
Trigger: GCTGCACAGAACTGCCTTTCAAACAGCCAAATTACT...CACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp ATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTATTGGCATGTGGCGTCTaGCTCAGGGTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IWGLASLPGSKLSFSWSLLACGV*LRVWGR
Trigger: TCTGCCCCACACCCTGAGTCAGACGCCACATGCCAA...TAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp AGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGTGACTTCAGGAAATTaGGCTTCTTCAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: SQRGTDHGHAIGLQWFATVTSGN*ASSDEW
Trigger: CCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCAC...GGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCCGCCTACTCTTCACCTaGAGCAGCTGCCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTRLLFT*SSCLQG
Trigger: GCCTTGAAGGCAGCTGCTGCAGGTGAAGAGTAGGCG...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGTCGGAGGCCGCTCTCTaGCCCGCCGCCTACTCTTCA +
Preference number: 4 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKSEAAL*PAAYSS
Trigger: TGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCCGA...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATCTGGATTCGCTGCTCATaGAGTTGCTGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: IFLCRRSTAERVKHLLQIWIRCS*SCWSRW
Trigger: CCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCA...GATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATATACTGGCTGAATGCTaGCAGGACATTCTTATGCGC +
Preference number: 4 (lower is better)
Translates to: GWGVHIRVSIGLRLCLLHILAEC*QDILMR
Trigger: GCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTAT...ATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTCATCTGGGGTCAGGGTaGTTTGTAGAGACAATGTAC +
Preference number: 4 (lower is better)
Translates to: LSSYKWWKMLDCPGGHRRHLGSG*FVETMY
Trigger: GTACATTGTCTCTACAAAGCACCCTGACCCCAGATG...ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR GCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGCAGTTCTGTGCAGCTaGCATCTGAAGTATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTAVLCS*HLKYQE
Trigger: CTCCTGATACTTCAGATGGCAGCTGCACAGAACTGC...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGCCATGCCATCGGCCTaGAGTGGTTCGCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLAMPSA*SGSPPA
Trigger: AGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGC...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp ACAGAATTTTCCACTGGGTGGACAGGGAGTTTAACCGACACTGGCATCAGCGTCCTGACGGCACAAGGCTaGCTCTCTACCGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TEFSTGWTGSLTDTGISVLTAQG*LSTVVR
Trigger: CCTTACCACGGTAGAGAGCCAGCCTTGTGCCGTCAG...GACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CATGAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATTGGTTCGCCACCGGCTaGGGTGTCCACATCCGAGTA +
Preference number: 4 (lower is better)
Translates to: HEVGSWTVTYNRSRQSGYWFATG*GVHIRV
Trigger: TACTCGGATGTGGACACCCCAGCCGGTGGCGAACCA...ATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGGCTCAACCATTCAGGTaGCCCTCGGAGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRAQPFR*PSEAAL
Trigger: GAGAGCGGCCTCCGAGGGTCACCTGAATGGTTGAGC...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATGAGAAGTGTACATaGAGTCCAGGATCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTDEKCT*SPGSAL
Trigger: TAGGGCAGATCCTGGACTTCATGTACACTTCTCATC...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR TCA 90 bp GCATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASGAWQVYQDPNSASPGHRMHSE*LTAQGW
Trigger: CCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCT...GTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACTTGGCATGTGGCGTCTaGCTCAGGGTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHLACGV*LRVWGR
Trigger: TCTGCCCCACACCCTGAGTCAGACGCCACATGCCAA...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCGTGACTTCAGGAAATTaGGCTTCTTCAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSVTSGN*ASSDEW
Trigger: CCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCAC...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCCTCTGCGTATTTCTGTaGCTTCAGGAAATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSLCVFL*LQEIEL
Trigger: AAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAG...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CATGAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCC +
Preference number: 4 (lower is better)
Translates to: HEVGSWTVTYNRSRQSGYPAEVT*SPKTFP
Trigger: GGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGG...ATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: LASASQTCLGRKSLSSEITSLLN*EHASTV
Trigger: CACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGT...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAAGCCTTCGCTTCTGTaGCGTCAGCGCTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVKPSLL*RQRSLP
Trigger: CGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTT...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAAACATGTACAGTAGTTaGCACGATGCACACGCGCTT +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTNMYSS*HDAHAL
Trigger: AAGCGCGTGTGCATCGTGTCAACTACTGTACATGTT...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAACGCTGCTCATGCAGTTaGTGGAGCAGATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQRCSCS*WSRWQL
Trigger: CAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCG...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCTACTATTACAAGGCATaGCAGGTGGCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: PAHLGSRHQLCSASSCAAYYYKA*QVAVLQ
Trigger: CTGTAGTACAGCCACCTGGCATGCCTTGTAATAGTA...GGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR GCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCAGCTGTCCAACGTTTTGTTCTaGTGTGCATCTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPQAEQLSNVLF*CASAEH
Trigger: ATGTTCAGCAGATGCACAGCAGAACAAAACGTTGGA...CAGCTGCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTGACGTCGCCAGAGGCTaGAAACCTCTTTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLDVARG*KPLSTD
Trigger: ATCTGTGGAAAGAGGTTTGCAGCCTCTGGCGACGTC...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTAACGGATCATGGCCATaGCATCGGCCTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSSLAPRESCWRKTDPLSNGSWP*HRPAVV
Trigger: AACCACTGCAGGCCGATGGCATGGCCATGATCCGTT...ACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTGGAAGATGCTCGACTaGCCAGGGGGTCACCGCCGT +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRWKMLD*PGGHRR
Trigger: ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGAAGATGCTCGACTaGCCAGGGGGTCACCGCCGT +
Preference number: 4 (lower is better)
Translates to: LTIGAARVAIKFCHRIFHWKMLD*PGGHRR
Trigger: ACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA...GTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATCTGGGAACTCGTTTTCATTCTaGAGCGTCTTCATCGCTAGC +
Preference number: 4 (lower is better)
Translates to: GCPHPSKHRPEAVSAASGNSFSF*SVFIAS
Trigger: GCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTT...CCCAGATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTCGCAGCGATCCGCTaGCCGCGGAATCATCACGAC +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWLAAIR*PRNHHD
Trigger: GTCGTGATGATTCCGCGGCCAGCGGATCGCTGCGAG...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CCAGGAAGTTGGAAGGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATGACTGCTCATGCAGTTGCTaGAGCAGATGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGSWKVSARETPGCIQNDCSCSC*SRWQLW
Trigger: CCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCA...GTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp ACTGAGAACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGTGCTTGACAGGTTGTTaGCATGTGGCGTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: TENTPLPWRSAVHHWSNSCLTGC*HVASDS
Trigger: TGAGTCAGACGCCACATGCCAACAACCTGTCAAGCA...CGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CGGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCAAACCATCATCTGACTTaGGTTCAGATACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGCPHPSKHRPEAVSAANHHLT*VQILAL
Trigger: CAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTT...TGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CTGCAAGTTACCTGCCTGTATGAGACCGTTTGTGAAGCTCCAAGTTGCTTGGGTGAGGTCTCGATGGCTTaGCTGAGCTCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LQVTCLYETVCEAPSCLGEVSMA*LSSSST
Trigger: TGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTC...ACCCAAGCAACTTGGAGCTTCACAAACGGTCTCATACAGGCAGGTAACTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp GCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTCTGAGGTCTCGATGGCTTaGCTGAGCTCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ASASQTCLGRKSLSSEISEVSMA*LSSSST
Trigger: TGTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTC...AGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACGCTGCATCTGGGGCTTaGCAAGTTTACCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: GAARVAIKFCHRIFHWVDAASGA*QVYQDP
Trigger: TGGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGC...GTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAAGTTCCTATAAGTGGTaGAAGATGCTCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTSSYKW*KMLDCP
Trigger: TGGGCAGTCGAGCATCTTCCACCACTTATAGGAACT...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCATCATTCTTCTGGCTTaGAGAATTCTGAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISRRQSIILLA*RILKEA
Trigger: AGCCTCTTTCAGAATTCTTCAAGCCAGAAGAATGAT...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR TCA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTGCATTCAGAATGACTaGCGGCACAAGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LASASQTCLGRKSLSSEICIQND*RHKAGS
Trigger: AGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCA...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSLAPRESCWRKTDPLSRMHSE*LTAQGW
Trigger: CCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCT...ACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATCTCTATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPLSTDLYCLWD*SVWDWS
Trigger: AGACCAGTCCCAGACACTTCAGTCCCAGAGACAATA...GAGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp GCATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTGGTCACTAACTCCATaGGGTTGGATCATGGACCGT +
Preference number: 4 (lower is better)
Translates to: ASGAWQVYQDPNSASPGHWSLTP*GWIMDR
Trigger: ACGGTCCATGATCCAACCTCATGGAGTTAGTGACCA...GTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATCTCACATGTGGAAAAACTGACCCTCTaGGTTCCTATAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CRRSTAERVKHLLQISHVEKLTL*VPISGG
Trigger: TCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTC...CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAACCAGCCTGCTAAACTaGGAACACGCCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQTSLLN*EHASTV
Trigger: CACGGTAGAGGCGTGTTCTCAGTTTAGCAGGCTGGT...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGCTTGGCTGAGCTCCTCCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGAAAATACTGGCTGAATaGTGCCAGGACATTCTTATG +
Preference number: 4 (lower is better)
Translates to: GLAELLQHIWALVTSFAVKILAE*CQDILM
Trigger: CATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTT...CACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAGCTCAGCCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTGCAGTTCTGTGCAGCTaGCATCTGAAGTATCAGGAG +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLAVLCS*HLKYQE
Trigger: CTCCTGATACTTCAGATGGCAGCTGCACAGAACTGC...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTCTGACTGGGACCAGCTaGGTGTTTATGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLLTGTS*VFMVLL
Trigger: AAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAG...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACGGCCGCTCCCCCGTGTaGCGAATTCTGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: CWRKTDPLSSYKWWKMLDGRSPV*RILCFT
Trigger: AGTAAAGCACAGAATTCGGCACACGGGGGAGCGGCC...GTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTATCTCCCCAGTGTGAGTaGGGACATGCCTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLSPQCE*GHACGG
Trigger: ACCTCCGCAGGCATGTCCGCACTCACACTGGGGAGA...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTCAGTGCATCTTCTTGTaGCGCCGGAGCACCGCAGAG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVQCIFL*RRSTAE
Trigger: CTCTGCGGTGCTCCGGCGGCACAAGAAGATGCACTG...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACGAGTTTAACCGACACTaGCATCAGCGTCACAGACGT +
Preference number: 4 (lower is better)
Translates to: GAARVAIKFCHRIFHWVDEFNRH*HQRHRR
Trigger: ACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTC...GTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGCTGCATCTGGGGCTTaGCAAGTTTACCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTAASGA*QVYQDP
Trigger: TGGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAAGGGGGTCACCGCCGTaGTTGTCCAAAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLRGSPP*LSKAAR
Trigger: TCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCT...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp TGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTAACTAACACGCCTCTACCGTaGAGAAGCGCGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: WGLASLPGSKLSFSWSLTNTPLP*RSAVHH
Trigger: GTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTT...AGTTAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGCTGGGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATAAGCTACCTATTCTCTaGCTAGTTAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GWGVHIRVSIGLRLCLLHKLPIL*LVRRHC
Trigger: ACAGTGCCTTCTAACTAGCCAGAGAATAGGTAGCTT...ATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR TCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGATCAGGAGCTTGTTTTaGGATTTCACCTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRIRSLF*DFTCGV
Trigger: CACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGAT...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGTTGAGCTTCTTCAGATaGATGGCCTTTTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISLFPQLSFFR*MAFLSL
Trigger: GAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAA...CTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRPAEVT*SPKTFP
Trigger: GGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCTGGTCACTAACTCCATaGGGTTGGATCATGGACCGT +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTWSLTP*GWIMDR
Trigger: ACGGTCCATGATCCAACCTCATGGAGTTAGTGACCA...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTATTCACCTGCAGCAGCTaGCTTCAAGGCCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLFTCSS*LQGHSQ
Trigger: CTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAA...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTTCACCTGCAGCAGCTaGCTTCAAGGCCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LTIGAARVAIKFCHRIFHFTCSS*LQGHSQ
Trigger: CTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAA...GTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACGGTGAAGCATGCGGATaGGATTCATCCAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: GAARVAIKFCHRIFHWVDGEACG*DSSNVL
Trigger: CAAAACGTTGGATGAATCGCATCCGCATGCTTCACC...GTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCAAGTTGGAAGGTAAGTaGTCGGGAGACTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTKLEGK*SGDSRM
Trigger: CATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTT...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATCTCACATGTGGTGTGCCGAATTCTGTaGTTTACTAACTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CRRSTAERVKHLLQISHVVCRIL*FTNFLC
Trigger: GCAAAGGAAGTTAGTAAAGCACAGAATTCGGCACAC...CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCGGCCGCTCCCCCGTGTaGCGAATTCTGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILGRSPV*RILCFT
Trigger: AGTAAAGCACAGAATTCGGCACACGGGGGAGCGGCC...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGTGGCTATCAAATTCTaGCACAGAATTTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTVAIKF*HRIFHW
Trigger: CCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCAC...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TCAAACCATCATCTGACTTGGGTTCAGATACTTGCTCTGCGTATTTCTGTGACTCTCGCAGCGATCCGCTaGCCGCGGAATCATCACGAC +
Preference number: 4 (lower is better)
Translates to: SNHHLTWVQILALRISVTLAAIR*PRNHHD
Trigger: GTCGTGATGATTCCGCGGCCAGCGGATCGCTGCGAG...AGTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGCTGGGCCAGGAAGTTaGAAGGTAAGTGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLAGPGS*KVSARE
Trigger: CTCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGC...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp TGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACAGATCTCACATGTGAACCATCATCTGACTTaGGTTCAGATACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRRSTAERVKHLLQISHVNHHLT*VQILAL
Trigger: CAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTT...CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACATTTTCTTCAGCACTTTaGCTGCTAGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTFSSAL*LLAFSR
Trigger: CCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAA...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACAACACGCCTCTACCGTaGAGAAGCGCGGTACATCAC +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHNTPLP*RSAVHH
Trigger: GTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTT...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCATCAGGAGCTTGTTTTaGGATTTCACCTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTIRSLF*DFTCGV
Trigger: CACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGAT...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCAGTGACTTCAGGAAATTaGGCTTCTTCAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: CGHACGGHLIPQNISLFPVTSGN*ASSDEW
Trigger: CCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCAC...TGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp TGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCATGTCAAACCATCATCTaGCTTGGGTTCAGATACTTG +
Preference number: 4 (lower is better)
Translates to: CGHACGGHLIPQNISLFPCQTII*LGFRYL
Trigger: CAAGTATCTGAACCCAAGTCAGATGATGGTTTGACA...TGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp GCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTATATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: ARYITGLTRFHSAASSSLYCLWD*SVWDWS
Trigger: AGACCAGTCCCAGACACTTCAGTCCCAGAGACAATA...TAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCCACACTCATCACAGGTaGAGACTTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTHTHHR*RLYQPC
Trigger: ACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTG...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCAGGCCTTGGATTCGCTaGTCATGCAGTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILRPWIR*SCSCWS
Trigger: GCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCT...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACAGGCCTTGGATTCGCTaGTCATGCAGTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LTIGAARVAIKFCHRIFHRPWIR*SCSCWS
Trigger: GCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCT...GTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CTCTGGCTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTTACTATTACAAGGCATaGCAGGTGGCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: LWLVRRHCHGETGSSYSLYYYKA*QVAVLQ
Trigger: CTGTAGTACAGCCACCTGGCATGCCTTGTAATAGTA...AAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCCATCTGGGGTCAGGGTaGTTTGTAGAGACAATGTAC +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTHLGSG*FVETMY
Trigger: GTACATTGTCTCTACAAAGCACCCTGACCCCAGATG...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAAAGTTGGAAGGTAAGTaGTCGGGAGACTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQKLEGK*SGDSRM
Trigger: CATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTT...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GAGTGCGGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ECGHACGGHLIPQNISLFLGSDT*SAYFCD
Trigger: GTCACAGAAATACGCAGAGCAAGTATCTGAACCCAA...AAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRSPALQ*IFLCRR
Trigger: CCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp AGATCTCGCAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTGAGTCTGCATCACCAGCTTTGCAGTaGATCTTCTTGTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RSRRCMVFHQNAVVSESASPALQ*IFLCRR
Trigger: CCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGA...TGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp ATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTATCTCGTCACCAGCTTTaGAGTGCATCTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: IWGLASLPGSKLSFSWSLSRHQL*SASSCA
Trigger: GGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGA...TAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp ACTGAGAACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGGTGGCTATCAAATTCTaGCACAGAATTTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: TENTPLPWRSAVHHWSNSVAIKF*HRIFHW
Trigger: CCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCAC...CGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAAACGGATCATGGCCATaGCATCGGCCTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLNGSWP*HRPAVV
Trigger: AACCACTGCAGGCCGATGGCATGGCCATGATCCGTT...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGATAAGTGGTGGAAGATaGTCGACTGCCCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRISGGR*STAQGV
Trigger: GACCCCCTGGGCAGTCGAGCATCTTCCACCACTTAT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGAGCAGATGGCAGCTGTaGGTAGCAACAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWSRWQL*VATGSM
Trigger: CATGGACCCTGTTGCTACCCACAGCTGCCATCTGCT...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGAGCAGATGGCAGCTGTaGGTAGCAACAGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRSRWQL*VATGSM
Trigger: CATGGACCCTGTTGCTACCCACAGCTGCCATCTGCT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACAGTTGCTGGAGCAGATaGCAGCTGTGGGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHSCWSR*QLWVAT
Trigger: TGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACT...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTGCTCATGCAGTTGCTaGAGCAGATGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWCSCSC*SRWQLW
Trigger: CCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTAGCTCACAAAGCAGGCCTTaGATTCGCTGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: AVHHWSNSFSFCSVFIASSQSRP*IRCSCS
Trigger: ACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGA...GCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGTTTTCTTCAGCACTTTaGCTGCTAGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GHACGGHLIPQNISLFPQFSSAL*LLAFSR
Trigger: CCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAA...CTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR CCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCCTCCTCCAGCACATCTaGGCTCTCGTCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILLLQHI*ALVTSF
Trigger: AAAGCTGGTGACGAGAGCCCAGATGTGCTGGAGGAG...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTAGCTGTGTCTGCTGCATCTaGGGCTTGGCAAGTTTACCA +
Preference number: 4 (lower is better)
Translates to: AVHHWSNSFSFCSVFIASCVCCI*GLASLP
Trigger: TGGTAAACTTGCCAAGCCCCAGATGCAGCAGACACA...GCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCAGTTCCTATAAGTGGTaGAAGATGCTCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTSSYKW*KMLDCP
Trigger: TGGGCAGTCGAGCATCTTCCACCACTTATAGGAACT...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp TGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGCCCAGAGAGTCATGCTaGAGAAAAACTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: WTVTYNRSRQSGYQILPQPRESC*RKTDPL
Trigger: CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGG...CTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCAGTAATTTGGCTGTTTaGAAGGCAGTTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTSNLAV*KAVLCS
Trigger: GCTGCACAGAACTGCCTTTCAAACAGCCAAATTACT...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTTGCATTCAGAATGACTaGCGGCACAAGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVCIQND*RHKAGS
Trigger: AGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCA...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVRMHSE*LTAQGW
Trigger: CCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCT...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp CTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATCTCGCACTCTGCGTATTTCTGTaGCTTCAGGAAATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LRRSPDPPKHFPLSTDLALCVFL*LQEIEL
Trigger: AAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAG...TGCGAGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR TCA 90 bp GACAGGGAGTTTAACCGACACTGGCATCAGCGTCACAGACGTGTCTTGGGAGAATGTCAAACCATCATCTaGCTTGGGTTCAGATACTTG +
Preference number: 4 (lower is better)
Translates to: DREFNRHWHQRHRRVLGECQTII*LGFRYL
Trigger: CAAGTATCTGAACCCAAGTCAGATGATGGTTTGACA...TTCTCCCAAGACACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTCCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGGAATGCCGTCGTAAGTaGGTCTGCAAGTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWECRRK*VCKLPA
Trigger: GGCAGGTAACTTGCAGACTCACTTACGACGGCATTC...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGAAAAACTGACCCTCTaGGTTCCTATAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTEKLTL*VPISGG
Trigger: TCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTCCAACCTCTTTGTCAAACCATCATCTGACTTGGGTTCAGATACTTGCTCTTTCACCTGCAGCAGCTaGCTTCAAGGCCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: DSNLFVKPSSDLGSDTCSFTCSS*LQGHSQ
Trigger: CTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAA...AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTGGATTCGCTGCTCATaGAGTTGCTGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRWIRCS*SCWSRW
Trigger: CCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGTCCAACGTTTTGTTCTaGTGTGCATCTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: AARVAIKFCHRIFHWVDRSNVLF*CASAEH
Trigger: ATGTTCAGCAGATGCACAGCAGAACAAAACGTTGGA...CCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CCACACTCATCACAGGTGAAGACTTTATCAGCCGTGTGTGTCTTTTTGTGCTCCAAGTTGGAAGGTAAGTaGTCGGGAGACTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PHSSQVKTLSAVCVFLCSKLEGK*SGDSRM
Trigger: CATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTT...GGAGCACAAAAAGACACACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATCTCAACCATCATCTGACTTaGGTTCAGATACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPLSTDLNHHLT*VQILAL
Trigger: CAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTT...GAGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR CCA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATCTCAAGCTCCAAGTTGCTTaGGTGTTTAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CLRRSPDPPKHFPLSTDLKLQVA*VFKRFP
Trigger: GGGAAACCTTTTAAACACCCAAGCAACTTGGAGCTT...GAGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR CCA 90 bp CGTTTTCATTCTGCAGCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGACATGAGGTTGGATCATaGACCGTAACTTACAATAGG +
Preference number: 4 (lower is better)
Translates to: RFHSAASSSLAPRESCWRHEVGS*TVTYNR
Trigger: CCTATTGTAAGTTACGGTCCATGATCCAACCTCATG...TCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGCTGCAGAATGAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACCATGAGGTTGGATCATaGACCGTAACTTACAATAGG +
Preference number: 4 (lower is better)
Translates to: GAARVAIKFCHRIFHWVDHEVGS*TVTYNR
Trigger: CCTATTGTAAGTTACGGTCCATGATCCAACCTCATG...GTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGGCTGCATCTGGGGCTTaGCAAGTTTACCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKAASGA*QVYQDP
Trigger: TGGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGC...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GATTCCAACCTCTTTGTCAAACCATCATCTGACTTGGGTTCAGATACTTGCTCTGAGAGGAACGGATCATaGCCATGCCATCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DSNLFVKPSSDLGSDTCSERNGS*PCHRPA
Trigger: TGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTC...AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp TGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGCTGAGTTCCTATAAGTaGTGGAAGATGCTCGACTGC +
Preference number: 4 (lower is better)
Translates to: WTVTYNRSRQSGYQILPQLSSYK*WKMLDC
Trigger: GCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG...CTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAACTGAGTTCCTATAAGTaGTGGAAGATGCTCGACTGC +
Preference number: 4 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQLSSYK*WKMLDC
Trigger: GCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TGCCACAGAATTTTCCACTGGGTGGACAGGGAGTTTAACCGACACTGGCATCAGAGCGCGGTACATCACTaGTCTAACTCGTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: CHRIFHWVDREFNRHWHQSAVHH*SNSFSF
Trigger: GAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT...CTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CCAGGAAGTTGGAAGGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATGACCTCTGCGTATTTCTGTaGCTTCAGGAAATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGSWKVSARETPGCIQNDLCVFL*LQEIEL
Trigger: AAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAG...GTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR TCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTATATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLYCLWD*SVWDWS
Trigger: AGACCAGTCCCAGACACTTCAGTCCCAGAGACAATA...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTTATTGTCTCTGGGACTaGAGTGTCTGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: VGSWTVTYNRSRQSGYQIYCLWD*SVWDWS
Trigger: AGACCAGTCCCAGACACTTCAGTCCCAGAGACAATA...AATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTGCCACACTCATCACAGGTaGAGACTTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: WRKTDPLSSYKWWKMLDCHTHHR*RLYQPC
Trigger: ACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTG...GCAGTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTGGTCACTAACTCCATaGGGTTGGATCATGGACCGT +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRWSLTP*GWIMDR
Trigger: ACGGTCCATGATCCAACCTCATGGAGTTAGTGACCA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACATACTGGCTGAATGCTaGCAGGACATTCTTATGCGC +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHILAEC*QDILMR
Trigger: GCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTAT...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCTCCAACGTTTTGTTCTaGTGTGCATCTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTSNVLF*CASAEH
Trigger: ATGTTCAGCAGATGCACAGCAGAACAAAACGTTGGA...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCTGACTGGGACCAGCTaGGTGTTTATGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRLTGTS*VFMVLL
Trigger: AAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp ACAGAATTTTCCACTGGGTGGACAGGGAGTTTAACCGACACTGGCATCAGCGTCTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TEFSTGWTGSLTDTGISVLGSDT*SAYFCD
Trigger: GTCACAGAAATACGCAGAGCAAGTATCTGAACCCAA...GACGCTGATGCCAGTGTCGGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTCTCGTCACCAGCTTTaGAGTGCATCTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRSRHQL*SASSCA
Trigger: GGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTCACAAAGCAGGCCTTaGATTCGCTGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWSQSRP*IRCSCS
Trigger: ACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCAACTCTCTCCTGACTaGGACCAGCTGCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRQLSPD*DQLRVY
Trigger: ATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTGCTTGACAGGTTGTTaGCATGTGGCGTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWCLTGC*HVASDS
Trigger: TGAGTCAGACGCCACATGCCAACAACCTGTCAAGCA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTAAGCTCCAAGTTGCTTaGGTGTTTAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LASASQTCLGRKSLSSEIKLQVA*VFKRFP
Trigger: GGGAAACCTTTTAAACACCCAAGCAACTTGGAGCTT...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp TGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGGATCTCGCAGATGTATaGTTTTTCACCAGAATGCCG +
Preference number: 4 (lower is better)
Translates to: WTVTYNRSRQSGYQILPQDLADV*FFTRMP
Trigger: CGGCATTCTGGTGAAAAACCATACATCTGCGAGATC...CTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGGTCACAGACGTGTCTTaGGAGAAAGAGTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRVTDVS*EKESEL
Trigger: GAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGAC...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGGTCACAGACGTGTCTTaGGAGAAAGAGTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKVTDVS*EKESEL
Trigger: GAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGAC...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGAGTTTAACCGACACTaGCATCAGCGTCACAGACGT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLEFNRH*HQRHRR
Trigger: ACGTCTGTGACGCTGATGCCAGTGTCGGTTAAACTC...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTGTGTCTGCTGCATCTaGGGCTTGGCAAGTTTACCA +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRCVCCI*GLASLP
Trigger: TGGTAAACTTGCCAAGCCCCAGATGCAGCAGACACA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTCCCAGAGAGTCATGCTaGAGAAAAACTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVPRESC*RKTDPL
Trigger: CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGG...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGATGAGAAGTGTACATaGAGTCCAGGATCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVDEKCT*SPGSAL
Trigger: TAGGGCAGATCCTGGACTTCATGTACACTTCTCATC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR TCA 90 bp GTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTATCAGGAGCTTGTTTTaGGATTTCACCTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: VGSWTVTYNRSRQSGYQIIRSLF*DFTCGV
Trigger: CACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGAT...AATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGTGCAGCTGCCATCTaGAGTATCAGGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILCAAAI*SIRSLF
Trigger: AAACAAGCTCCTGATACTTCAGATGGCAGCTGCACA...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGTGTCAAACCATCATCTaGCTTGGGTTCAGATACTTG +
Preference number: 4 (lower is better)
Translates to: WTVTYNRSRQSGYQILPQCQTII*LGFRYL
Trigger: CAAGTATCTGAACCCAAGTCAGATGATGGTTTGACA...CTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCACACTCATCACAGGTaGAGACTTTATCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VGSWTVTYNRSRQSGYQIHTHHR*RLYQPC
Trigger: ACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTG...AATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp CCACACTCATCACAGGTGAAGACTTTATCAGCCGTGTGTGTCTTTTTGTGCTCCGAAAAACTGACCCTCTaGGTTCCTATAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PHSSQVKTLSAVCVFLCSEKLTL*VPISGG
Trigger: TCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTC...GGAGCACAAAAAGACACACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCAACATGTACAGTAGTTaGCACGATGCACACGCGCTT +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILNMYSS*HDAHAL
Trigger: AAGCGCGTGTGCATCGTGTCAACTACTGTACATGTT...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGAATTTTCCACATACTGGCTGAATGCTaGCAGGACATTCTTATGCGC +
Preference number: 4 (lower is better)
Translates to: LTIGAARVAIKFCHRIFHILAEC*QDILMR
Trigger: GCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTAT...GTGGAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTAAACTTGCAAACACTGTaGTGTGTCCAGCATTACTTG +
Preference number: 4 (lower is better)
Translates to: ARYITGLTRFHSAASSSLNLQTL*CVQHYL
Trigger: CAAGTAATGCTGGACACAGCACAGTGTTTGCAAGTT...TAGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGGTGAAGCATGCGGATaGGATTCATCCAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLGEACG*DSSNVL
Trigger: CAAAACGTTGGATGAATCGCATCCGCATGCTTCACC...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTACTGATGGTGAAGCATaGGGATGCGATTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVTDGEA*GCDSSN
Trigger: GTTGGATGAATCGCATCCGCATGCTTCACCATCAGT...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTTCTGTGTGCCGAATTCTGTaGTTTACTAACTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASASQTCLGRKSLSSEISVCRIL*FTNFLC
Trigger: GCAAAGGAAGTTAGTAAAGCACAGAATTCGGCACAC...AGAAATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACAACTCGTTTTCATTCTaGAGCGTCTTCATCGCTAGC +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHNSFSF*SVFIAS
Trigger: GCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTT...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGAGGCTCCTAAAATACTaGCTGAATGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWRLLKY*LNAART
Trigger: TGTCCTGGCAGCATTCAGCCAGTATTTTAGGAGCCT...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR CCA 90 bp TCAGATACTTGCTCTGCGTATTTCTGTGACTTCAGGAAATTGAGCTTCTTCAGACAGGTTGTTGGCATGTaGCGTCTGACTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SDTCSAYFCDFRKLSFFRQVVGM*RLTQGV
Trigger: CACACCCTGAGTCAGACGCCACATGCCAACAACCTG...TCTGAAGAAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAGCAAGTATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp ATCTGGGGCTTGGCAAGTTTACCAGGATCCAAACTCAGCTTCTCCTGGTCACTATTTTCTTCAGCACTTTaGCTGCTAGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: IWGLASLPGSKLSFSWSLFSSAL*LLAFSR
Trigger: CCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAA...TAGTGACCAGGAGAAGCTGAGTTTGGATCCTGGTAAACTTGCCAAGCCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GAGGTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAAAGCTCCAAGTTGCTTaGGTGTTTAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EVGSWTVTYNRSRQSGYQKLQVA*VFKRFP
Trigger: GGGAAACCTTTTAAACACCCAAGCAACTTGGAGCTT...TTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTACTGAGTTCCTATAAGTaGTGGAAGATGCTCGACTGC +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLLSSYK*WKMLDC
Trigger: GCAGTCGAGCATCTTCCACCACTTATAGGAACTCAG...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp ATAATTCACACGCGTATTGTCTCTGGGACTGAAGTGTCTGGGACTGGTCTTCCAAGCGCGGTACATCACTaGTCTAACTCGTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: IIHTRIVSGTEVSGTGLPSAVHH*SNSFSF
Trigger: GAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT...TGGAAGACCAGTCCCAGACACTTCAGTCCCAGAGACAATACGCGTGTGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CCA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTACATTCCTAAAATACTaGCTGAATGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIATFLKY*LNAART
Trigger: TGTCCTGGCAGCATTCAGCCAGTATTTTAGGAATGT...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR TCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTTGAGCTTCTTCAGATaGATGGCCTTTTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWLSFFR*MAFLSL
Trigger: GAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTATTGAGCTTCTTCAGATaGATGGCCTTTTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLLSFFR*MAFLSL
Trigger: GAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAA...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTTTGAGCTTCTTCAGATaGATGGCCTTTTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: VGSWTVTYNRSRQSGYQILSFFR*MAFLSL
Trigger: GAGGCTCAAAAAGGCCATTCATCTGAAGAAGCTCAA...AATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR TCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACCTCTGCGTATTTCTGTaGCTTCAGGAAATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHLCVFL*LQEIEL
Trigger: AAGCTCAATTTCCTGAAGTCACAGAAATACGCAGAG...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAAGATGCTTCAGATTATaGGCCATCATCAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLRCFRL*AIIRRE
Trigger: TTCCCTCCTGATGATGGCTCATAATCTGAAGCATCT...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCAGATGCTTCAGATTATaGGCCATCATCAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILRCFRL*AIIRRE
Trigger: TTCCCTCCTGATGATGGCTCATAATCTGAAGCATCT...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp AGATCTCGCAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTGAGTCTGCACTGCTGTGCATCTGCTaGACATTCCTAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: RSRRCMVFHQNAVVSESALLCIC*TFLKYW
Trigger: CCAGTATTTTAGGAATGTTCAGCAGATGCACAGCAG...TGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR GCA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAATGAAGTCCAGGATCTaGCCTATGCCACTGACATTT +
Preference number: 4 (lower is better)
Translates to: DASDYEPSSGGKLPILWLMKSRI*PMPLTF
Trigger: AAATGTCAGTGGCATAGGGCAGATCCTGGACTTCAT...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp AGAAGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCTTTTTGAGCCTCATCTaGTTGACAGGTTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RSAVHHWSNSFSFCSVFIFLSLI*LTGCWH
Trigger: ATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAA...GATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CWRKTDPLSSYKWWKMLDLGSDT*SAYFCD
Trigger: GTCACAGAAATACGCAGAGCAAGTATCTGAACCCAA...GTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGAGTCTGCAAGTTACCTaGCTGAGAGAAATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRSLQVT*LREMFP
Trigger: GGGAAACATTTCTCTCAGGCAGGTAACTTGCAGACT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGAACTCGTTTTCATTCTaGAGCGTCTTCATCGCTAGC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRNSFSF*SVFIAS
Trigger: GCTAGCGATGAAGACGCTGCAGAATGAAAACGAGTT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCGATCTCGCAGATGTATaGTTTTTCACCAGAATGCCG +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILDLADV*FFTRMP
Trigger: CGGCATTCTGGTGAAAAACCATACATCTGCGAGATC...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp AGATCTCGCAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTGAGTCTGCAGATCTCGCAGATGTATaGTTTTTCACCAGAATGCCG +
Preference number: 4 (lower is better)
Translates to: RSRRCMVFHQNAVVSESADLADV*FFTRMP
Trigger: CGGCATTCTGGTGAAAAACCATACATCTGCGAGATC...TGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000511458.1
CDS-3UTR CCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCCACAGAATTTTCCACTaGGTGGACAGGGAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILHRIFH*VDREFN
Trigger: GTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTG...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACTGGCTTGAAGAATTCTaGAAGAGGCTCCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHWLEEF*KRLLKY
Trigger: GTATTTTAGGAGCCTCTTTCAGAATTCTTCAAGCCA...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR TCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGTGACTTCAGGAAATTaGGCTTCTTCAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVVTSGN*ASSDEW
Trigger: CCATTCATCTGAAGAAGCTCAATTTCCTGAAGTCAC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR TCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGTCAAACCATCATCTaGCTTGGGTTCAGATACTTG +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILCQTII*LGFRYL
Trigger: CAAGTATCTGAACCCAAGTCAGATGATGGTTTGACA...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp TGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGATGCTCGACAAAATACTGGCTGAATaGTGCCAGGACATTCTTATG +
Preference number: 4 (lower is better)
Translates to: CWRKTDPLSSYKWWKMLDKILAE*CQDILM
Trigger: CATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTT...GTCGAGCATCTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR GCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTTTTTGAGCCTCATCTaGTTGACAGGTTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWFLSLI*LTGCWH
Trigger: ATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGTTGGGTTCAGATACTTaGTCTGCGTATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRLGSDT*SAYFCD
Trigger: GTCACAGAAATACGCAGAGCAAGTATCTGAACCCAA...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGGTGGCTATCAAATTCTaGCACAGAATTTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWVAIKF*HRIFHW
Trigger: CCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCAC...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCAACCATCATCTGACTTaGGTTCAGATACTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AQDASDYEPSSGGKLPILNHHLT*VQILAL
Trigger: CAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTT...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTTTTTCTTCAGCACTTTaGCTGCTAGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVFSSAL*LLAFSR
Trigger: CCTAGAGAAAGCTAGCAGCCAAAGTGCTGAAGAAAA...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CCA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGAAGCTCCAAGTTGCTTaGGTGTTTAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QDASDYEPSSGGKLPILWKLQVA*VFKRFP
Trigger: GGGAAACCTTTTAAACACCCAAGCAACTTGGAGCTT...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
3UTR CAA 72 bp GCAGATTCCAACCTCTTTGTCAAACCATCATCTGACTaGGGTTCAGATACTTGCTCTGCGTATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ADSNLFVKPSSD*GSDTCSAYFCD
Trigger: GTCACAGAAATACGCAGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR TCA 90 bp TGGCTATCAAATTCTGCCACAGAATTTTCCACTGGGTGGACAGGGAGTTTAACCTGGCTTGAAGAATTCTaGAAGAGGCTCCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: WLSNSATEFSTGWTGSLTWLEEF*KRLLKY
Trigger: GTATTTTAGGAGCCTCTTTCAGAATTCTTCAAGCCA...GGTTAAACTCCCTGTCCACCCAGTGGAAAATTCTGTGGCAGAATTTGATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR TCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGATCATTCTTCTGGCTTaGAGAATTCTGAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRIILLA*RILKEA
Trigger: AGCCTCTTTCAGAATTCTTCAAGCCAGAAGAATGAT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR GCA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGAAAATACTGGCTGAATaGTGCCAGGACATTCTTATG +
Preference number: 4 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRKILAE*CQDILM
Trigger: CATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTT...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR GCA 90 bp GATTCCAACCTCTTTGTCAAACCATCATCTGACTTGGGTTCAGATACTTGCTCTTTTTTGAGCCTCATCTaGTTGACAGGTTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DSNLFVKPSSDLGSDTCSFLSLI*LTGCWH
Trigger: ATGCCAACAACCTGTCAAGCAGATGAGGCTCAAAAA...AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTTGACAAAGAGGTTGGAATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS GCA 90 bp GTGACCCTCGGAGGCCGCTCTCTGCCCCGCCGCCTACTCTTCACCTaGAGCAGCTGCCTTCAAGGCCACTCGCAGCGATCCGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: VTLGGRSLPRRLLFT*SSCLQGHSQRSAGR
Trigger: GCGGCCAGCGGATCGCTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCCGAGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS GCA 90 bp GGAGGCCGCTCTCTGCCCCGCCGCCTACTCTTCACCTGCAGCAGCTaGCTTCAAGGCCACTCGCAGCGATCCGCTGGCCGCGGAATCATC +
Preference number: 5 (lower is better)
Translates to: GGRSLPRRLLFTCSS*LQGHSQRSAGRGII
Trigger: GATGATTCCGCGGCCAGCGGATCGCTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp TCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCAGAGAGGAACGTTGCAGTGCATCTTCTaGTGCCGCCGGAGCACCGCA +
Preference number: 5 (lower is better)
Translates to: STAQGVTAVVVQSSQRGTLQCIF*CRRSTA
Trigger: TGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAA...CGTTCCTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCGGAGGTCTCGATGGCTaGGCTGAGCTCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GHACGGHLIPQNISRRQSGGLDG*AELLQH
Trigger: GTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCC...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp AAGCAGCCAGAGAGGAACGGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCGGCTGGGCCAGGAAGTaGGAAGGTAAGTGCTCGGGA +
Preference number: 5 (lower is better)
Translates to: KQPERNGSWPCHRPAVVRGWARK*EGKCSG
Trigger: TCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGCC...GCGAACCACTGCAGGCCGATGGCATGGCCATGATCCGTTCCTCTCTGGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GGATCATGGCCATGCCATCGGCCTGCAGTGGTTCGCCACCGGCTGGGGTGTCCATTGAGCCTCATCTGCTaGACAGGTTGTTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: GSWPCHRPAVVRHRLGCPLSLIC*TGCWHV
Trigger: CACATGCCAACAACCTGTCAAGCAGATGAGGCTCAA...TGGACACCCCAGCCGGTGGCGAACCACTGCAGGCCGATGGCATGGCCATGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp TGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCATGCTGCATCTGGGGCTaGGCAAGTTTACCAGGATCC +
Preference number: 5 (lower is better)
Translates to: WKMLDCPGGHRRGCPKQPCCIWG*ASLPGS
Trigger: GGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGCA...TGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp ACTGAGAACACGCCTCTACCGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGGGGTCACCGCCGTGGTaGTCCAAAGCAGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TENTPLPWRSAVHHWSNSGSPPW*SKAARE
Trigger: CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCC...CGAGTTAGACCAGTGATGTACCGCGCTTCTCCACGGTAGAGGCGTGTTCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp TGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCATTGAGCCTCATCTGCTaGACAGGTTGTTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: WKMLDCPGGHRRGCPKQPLSLIC*TGCWHV
Trigger: CACATGCCAACAACCTGTCAAGCAGATGAGGCTCAA...TGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GGGTGTCCACATCCGAGTAAGCATAGGCCTGAGGCTGTGTCTGCTGCATCTGGGCTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GCPHPSKHRPEAVSAASGLSSPA*QCIFLC
Trigger: GCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAG...CCCAGATGCAGCAGACACAGCCTCAGGCCTATGCTTACTCGGATGTGGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CTGGCATCAGCGTCACAGACGTGTCTTGGGAGAAAGAGTCTGAGCTCTGAGATTGGAGGTCTCGATGGCTaGGCTGAGCTCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LASASQTCLGRKSLSSEIGGLDG*AELLQH
Trigger: GTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCC...AATCTCAGAGCTCAGACTCTTTCTCCCAAGACACGTCTGTGACGCTGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCGGGTCACCGCCGTGGTaGTCCAAAGCAGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTGSPPW*SKAARE
Trigger: CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCC...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGGGGTCACCGCCGTGGTaGTCCAAAGCAGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: APRESCWRKTDPLSSYKWGSPPW*SKAARE
Trigger: CTCTCTGGCTGCTTTGGACAACCACGGCGGTGACCC...CCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS CCA 90 bp CAAAGCAGGCCTTGGATTCGCTGCTCATGCAGTTGCTGGAGCAGATaGCAGCTGTGGGTAGCAACAGGGTCCATGCTCAACCATTCAGGT +
Preference number: 5 (lower is better)
Translates to: QSRPWIRCSCSCWSR*QLWVATGSMLNHSG
Trigger: ACCTGAATGGTTGAGCATGGACCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GCTGAGACAGCATCAAGCCTTCGCTTCTGTGACGTCAGCGCTCCCTCCCGCGGCCAGATTCCAACCTCTTaGTCAAACCATCATCTGACT +
Preference number: 5 (lower is better)
Translates to: AETASSLRFCDVSAPSRGQIPTS*SNHHLT
Trigger: AGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTG...GCCGCGGGAGGGAGCGCTGACGTCACAGAAGCGAAGGCTTGATGCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp CCAGGAAGTTGGAAGGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATGACTTGCAGTGCATCTTCTaGTGCCGCCGGAGCACCGCA +
Preference number: 5 (lower is better)
Translates to: PGSWKVSARETPGCIQNDLQCIF*CRRSTA
Trigger: TGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAA...GTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS GCA 90 bp AACATACAGTCACAAAGCAGGCCTTGGATTCGCTGCTCATGCAGTTaGTGGAGCAGATGGCAGCTGTGGGTAGCAACAGGGTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: NIQSQSRPWIRCSCS*WSRWQLWVATGSML
Trigger: GAGCATGGACCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGACTGTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS CCA 90 bp ATACAGTCACAAAGCAGGCCTTGGATTCGCTGCTCATGCAGTTGCTaGAGCAGATGGCAGCTGTGGGTAGCAACAGGGTCCATGCTCAAC +
Preference number: 5 (lower is better)
Translates to: IQSQSRPWIRCSCSC*SRWQLWVATGSMLN
Trigger: GTTGAGCATGGACCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGACTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAACATTTTGAACTaGCAAACACTGTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LGSRHQLCSASSCAAGAPQNILN*QTLCCV
Trigger: GACACAGCACAGTGTTTGCAAGTTCAAAATGTTCTG...CGGTGCTCCGGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR CAA 90 bp TGGAAGATGCTCGACTGCCCAGGGGGTCACCGCCGTGGTTGTCCAAAGCAGCCACAGACTCAGAACATTTaGAACTTGCAAACACTGTGC +
Preference number: 5 (lower is better)
Translates to: WKMLDCPGGHRRGCPKQPQTQNI*NLQTLC
Trigger: GCACAGTGTTTGCAAGTTCAAAATGTTCTGAGTCTG...TGGCTGCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGCATCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515012.5
CDS-3UTR CAA 90 bp GGACATGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCGCAGGCAGAGCTATCAGGAGCTTGTTTaGAGATTTCACCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: GHACGGHLIPQNISRRQSYQELV*RFHLRS
Trigger: ACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGATA...GCTCTGCCTGCGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CCAGCACATCTGGGCTCTCGTCACCAGCTTTGCAGTGCATCTTCTTGTGCCGCCGAGCGGGTAAAGCACTaGTTACAGATCTCACATGTG +
Preference number: 5 (lower is better)
Translates to: PAHLGSRHQLCSASSCAAERVKH*LQISHV
Trigger: CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTC...GGCGGCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAGCCCAGATGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CCAGGAAGTTGGAAGGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATGACGTCACAAAGCAGGCCTaGGATTCGCTGCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: PGSWKVSARETPGCIQNDVTKQA*DSLLMQ
Trigger: CTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGAC...GTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503703.5
CDS-3UTR CAA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACGGCTGGGCCAGGAAGTaGGAAGGTAAGTGCTCGGGA +
Preference number: 5 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHGWARK*EGKCSG
Trigger: TCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGCC...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGGAGGTCTCGATGGCTaGGCTGAGCTCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVGGLDG*AELLQH
Trigger: GTGCTGGAGGAGCTCAGCCAAGCCATCGAGACCTCC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS TCA 90 bp AAGTTGGAAGGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGGCTCTCTACCGTGGTAAGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: KLEGKCSGDSRMHSE*LTAQGWLSTVVRSV
Trigger: TACAGACCTTACCACGGTAGAGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACCTTCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GTGCATCTTCTTGTGCCGCCGGAGCACCGCAGAGCGGGTAAAGCACTTGTTACATATCAGGAGCTTGTTTaGAGATTTCACCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: VHLLVPPEHRRAGKALVTYQELV*RFHLRS
Trigger: ACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGATA...TGTAACAAGTGCTTTACCCGCTCTGCGGTGCTCCGGCGGCACAAGAAGATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGGGCTGGGCCAGGAAGTaGGAAGGTAAGTGCTCGGGA +
Preference number: 5 (lower is better)
Translates to: QDASDYEPSSGGKLPILWGWARK*EGKCSG
Trigger: TCCCGAGCACTTACCTTCCAACTTCCTGGCCCAGCC...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGGAGCGGGTAAAGCACTaGTTACAGATCTCACATGTG +
Preference number: 5 (lower is better)
Translates to: ASSSLAPRESCWRKTDPLERVKH*LQISHV
Trigger: CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTC...CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTTTGCAGTGCATCTTCTaGTGCCGCCGGAGCACCGCA +
Preference number: 5 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVLQCIF*CRRSTA
Trigger: TGCGGTGCTCCGGCGGCACAAGAAGATGCACTGCAA...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GCGTCTTCATCGCTAGCCCCCAGAGAGTCATGCTGGAGAAAAACTGACCCTCTGGATTCATCCAACGTTTaGTTCTGCTGTGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: ASSSLAPRESCWRKTDPLDSSNV*FCCASA
Trigger: AGCAGATGCACAGCAGAACAAAACGTTGGATGAATC...CAGAGGGTCAGTTTTTCTCCAGCATGACTCTCTGGGGGCTAGCGATGAAGACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCTTGAGCCTCATCTGCTaGACAGGTTGTTGGCATGTG +
Preference number: 5 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTLSLIC*TGCWHV
Trigger: CACATGCCAACAACCTGTCAAGCAGATGAGGCTCAA...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTGTCACAAAGCAGGCCTaGGATTCGCTGCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: ASDYEPSSGGKLPILWLVVTKQA*DSLLMQ
Trigger: CTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGAC...AACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGGTCACAAAGCAGGCCTaGGATTCGCTGCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKVTKQA*DSLLMQ
Trigger: CTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGAC...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CCACACTCATCACAGGTGAAGACTTTATCAGCCGTGTGTGTCTTTTTGTGCTCCCTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: PHSSQVKTLSAVCVFLCSLSSPA*QCIFLC
Trigger: GCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAG...GGAGCACAAAAAGACACACACGGCTGATAAAGTCTTCACCTGTGATGAGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGTGCTGCATCTGGGGCTaGGCAAGTTTACCAGGATCC +
Preference number: 5 (lower is better)
Translates to: QDASDYEPSSGGKLPILWCCIWG*ASLPGS
Trigger: GGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGCA...CCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp AGAGAGTCATGCTGGAGAAAAACTGACCCTCTGAGTTCCTATAAGTGGTGGAAGTGCTGCATCTGGGGCTaGGCAAGTTTACCAGGATCC +
Preference number: 5 (lower is better)
Translates to: RESCWRKTDPLSSYKWWKCCIWG*ASLPGS
Trigger: GGATCCTGGTAAACTTGCCAAGCCCCAGATGCAGCA...CTTCCACCACTTATAGGAACTCAGAGGGTCAGTTTTTCTCCAGCATGACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp TGCCTGCGGAGGTCACCTGATCCCCCAAAACATTTCCCTCTTTCCACAGATCTCAAACCATCATCTGACTaGGGTTCAGATACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CLRRSPDPPKHFPLSTDLKPSSD*GSDTCS
Trigger: AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTT...GAGATCTGTGGAAAGAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511458.1
CDS-3UTR CAA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTACTCTCGTCACCAGCTTaGCAGTGCATCTTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: DASDYEPSSGGKLPILWLLSSPA*QCIFLC
Trigger: GCACAAGAAGATGCACTGCAAAGCTGGTGACGAGAG...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp AGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTTCATCGCTGATTCATCCAACGTTTaGTTCTGCTGTGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: SAVHHWSNSFSFCSVFIADSSNV*FCCASA
Trigger: AGCAGATGCACAGCAGAACAAAACGTTGGATGAATC...AGCGATGAAGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp CTAGTTAGAAGGCACTGTCATGGGGAAACTGGGTCCTCCTACAGCCTTAACACCAAACCATCATCTGACTaGGGTTCAGATACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LVRRHCHGETGSSYSLNTKPSSD*GSDTCS
Trigger: AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTT...GGTGTTAAGGCTGTAGGAGGACCCAGTTTCCCCATGACAGTGCCTTCTAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp CGTGGAGAAGCGCGGTACATCACTGGTCTAACTCGTTTTCATTCTGCAGCGTCTAAACCATCATCTGACTaGGGTTCAGATACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: RGEARYITGLTRFHSAASKPSSD*GSDTCS
Trigger: AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTT...AGACGCTGCAGAATGAAAACGAGTTAGACCAGTGATGTACCGCGCTTCTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp TATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCACGAGCGGGTAAAGCACTaGTTACAGATCTCACATGTG +
Preference number: 5 (lower is better)
Translates to: YEPSSGGKLPILWLVRRHERVKH*LQISHV
Trigger: CACATGTGAGATCTGTAACAAGTGCTTTACCCGCTC...GTGCCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp TGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCTGCCACAGCAGATTCCAACCTCTTaGTCAAACCATCATCTGACT +
Preference number: 5 (lower is better)
Translates to: WTVTYNRSRQSGYQILPQQIPTS*SNHHLT
Trigger: AGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTG...CTGTGGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GCTCAAGATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCGATTCATCCAACGTTTaGTTCTGCTGTGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AQDASDYEPSSGGKLPILDSSNV*FCCASA
Trigger: AGCAGATGCACAGCAGAACAAAACGTTGGATGAATC...GAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS-3UTR CAA 90 bp GATGCTTCAGATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTATATCAGGAGCTTGTTTaGAGATTTCACCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: DASDYEPSSGGKLPILWLYQELV*RFHLRS
Trigger: ACTCCGCAGGTGAAATCTCAAAACAAGCTCCTGATA...TAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATCTGAAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337872.9
ENST00000503703.5
CDS GCA 90 bp GAAAGCAAAAGGCTGCTCAACAACTCTCTCCTGACTGGGACCAGCTaGGTGTTTATGGTACTGCTTACTGTAAAAGTTTCTGAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ESKRLLNNSLLTGTS*VFMVLLTVKVSEFV
Trigger: TACAAACTCAGAAACTTTTACAGTAAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTGTTGAGCAGCCTTTTGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS-3UTR CAA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCAGAACATTTTGAACTaGCAAACACTGTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRQNILN*QTLCCV
Trigger: GACACAGCACAGTGTTTGCAAGTTCAAAATGTTCTG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR CAA 90 bp GATTATGAGCCATCATCAGGAGGGAAGCTACCTATTCTCTGGCTAGTTAGAAGGCAGACTCAGAACATTTaGAACTTGCAAACACTGTGC +
Preference number: 5 (lower is better)
Translates to: DYEPSSGGKLPILWLVRRQTQNI*NLQTLC
Trigger: GCACAGTGTTTGCAAGTTCAAAATGTTCTGAGTCTG...CCTTCTAACTAGCCAGAGAATAGGTAGCTTCCCTCCTGATGATGGCTCATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337872.9
CDS-3UTR CAA 90 bp AGATCTCGCAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTGAGTCTGCAAAACCATCATCTGACTaGGGTTCAGATACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: RSRRCMVFHQNAVVSESAKPSSD*GSDTCS
Trigger: AGAGCAAGTATCTGAACCCAAGTCAGATGATGGTTT...TGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000511458.1
CDS-3UTR CAA 90 bp AGATCTCGCAGATGTATGGTTTTTCACCAGAATGCCGTCGTAAGTGAGTCTGCACAGATTCCAACCTCTTaGTCAAACCATCATCTGACT +
Preference number: 5 (lower is better)
Translates to: RSRRCMVFHQNAVVSESAQIPTS*SNHHLT
Trigger: AGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTG...TGCAGACTCACTTACGACGGCATTCTGGTGAAAAACCATACATCTGCGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000511458.1
CDS-3UTR CAA 90 bp GTTGGATCATGGACCGTAACTTACAATAGGAGCCGCCAGAGTGGCTATCAAATTCAGATTCCAACCTCTTaGTCAAACCATCATCTGACT +
Preference number: 5 (lower is better)
Translates to: VGSWTVTYNRSRQSGYQIQIPTS*SNHHLT
Trigger: AGTCAGATGATGGTTTGACAAAGAGGTTGGAATCTG...AATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGATCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503703.5
ENST00000515012.5
CDS GCA 90 bp AAGAGGCTCCTAAAATACTGGCTGAATGCTGCCAGGACATTCTTATaGGCTTTAAAGCAGACTCCTTTTACCACCAACATACAGTCACAA +
Preference number: 5 (lower is better)
Translates to: KRLLKYWLNAARTFL*ALKQTPFTTNIQSQ
Trigger: TTGTGACTGTATGTTGGTGGTAAAAGGAGTCTGCTTTAAAGCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTTAGGAGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000515012.5
CDS GCA 72 bp GGAGGCCGCTCTCTGCCCCGCCGCCTACTCTTCACCTaGAGCAGCTGCCTTCAAGGCCACTCGCAGCGATCC +
Preference number: 6 (lower is better)
Translates to: GGRSLPRRLLFT*SSCLQGHSQRS
Trigger: GGATCGCTGCGAGTGGCCTTGAAGGCAGCTGCTGCAGGTGAAGAGTAGGCGGCGGGGCAGAGAGCGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS CCA 72 bp CAAAGCAGGCCTTGGATTCGCTGCTCATGCAGTTGCTaGAGCAGATGGCAGCTGTGGGTAGCAACAGGGTCC +
Preference number: 6 (lower is better)
Translates to: QSRPWIRCSCSC*SRWQLWVATGS
Trigger: GGACCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS GCA 72 bp TCACAAAGCAGGCCTTGGATTCGCTGCTCATGCAGTTaGTGGAGCAGATGGCAGCTGTGGGTAGCAACAGGG +
Preference number: 6 (lower is better)
Translates to: SQSRPWIRCSCS*WSRWQLWVATG
Trigger: CCCTGTTGCTACCCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS TCA 72 bp GGTAAGTGCTCGGGAGACTCCAGGATGCATTCAGAATaGCTGACGGCACAAGGCTGGCTCTCTACCGTGGTA +
Preference number: 6 (lower is better)
Translates to: GKCSGDSRMHSE*LTAQGWLSTVV
Trigger: TACCACGGTAGAGAGCCAGCCTTGTGCCGTCAGTCATTCTGAATGCATCCTGGAGTCTCCCGAGCACTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS TCA 72 bp CCCAGTGTGAGTGCGGACATGCCTGCGGAGGTCACCTaGTCCCCCAAAACATTTCCCTGTATGAGACCGTTT +
Preference number: 6 (lower is better)
Translates to: PSVSADMPAEVT*SPKTFPCMRPF
Trigger: AAACGGTCTCATACAGGGAAATGTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACTCACACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504302.1
CDS GCA 72 bp ACCAACATACAGTCACAAAGCAGGCCTTGGATTCGCTaGTCATGCAGTTGCTGGAGCAGATGGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TNIQSQSRPWIR*SCSCWSRWQLW
Trigger: CCACAGCTGCCATCTGCTCCAGCAACTGCATGAGCAGCGAATCCAAGGCCTGCTTTGTGACTGTATGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5
CDS GCA 72 bp AGGCTGCTCAACAACTCTCTCCTGACTGGGACCAGCTaGGTGTTTATGGTACTGCTTACTGTAAAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: RLLNNSLLTGTS*VFMVLLTVKVS
Trigger: AGAAACTTTTACAGTAAGCAGTACCATAAACACGCAGCTGGTCCCAGTCAGGAGAGAGTTGTTGAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000503703.5
ENST00000515012.5
CDS GCA 72 bp ATTCTGAAAGAGGCTCCTAAAATACTGGCTGAATGCTaGCAGGACATTCTTATGCGCTTTAAAGCAGACTCC +
Preference number: 6 (lower is better)
Translates to: ILKEAPKILAEC*QDILMRFKADS
Trigger: GGAGTCTGCTTTAAAGCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTTAGGAGCCTCTTTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000515012.5
CDS GCA 72 bp AGAATTCTGAAAGAGGCTCCTAAAATACTGGCTGAATaGTGCCAGGACATTCTTATGCGCTTTAAAGCAGAC +
Preference number: 6 (lower is better)
Translates to: RILKEAPKILAE*CQDILMRFKAD
Trigger: GTCTGCTTTAAAGCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTTAGGAGCCTCTTTCAGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000515012.5
CDS GCA 72 bp CTAAAATACTGGCTGAATGCTGCCAGGACATTCTTATaGGCTTTAAAGCAGACTCCTTTTACCACCAACATA +
Preference number: 6 (lower is better)
Translates to: LKYWLNAARTFL*ALKQTPFTTNI
Trigger: TATGTTGGTGGTAAAAGGAGTCTGCTTTAAAGCGCATAAGAATGTCCTGGCAGCATTCAGCCAGTATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337872.9
ENST00000502918.1
ENST00000503703.5
ENST00000515012.5