RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB47 (Homo sapiens)

Ensembl gene IDs: ENSG00000114853

Ensembl transcript IDs: ENST00000232974.11, ENST00000505904.1, ENST00000680014.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTaGCAGCAGAGTGGGTGGGGAAGGCAAGTCCCTGGGGTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: DPWCHLVQVRDPWAC*QQSGWGRQVPGVQP
Trigger: GGGCTGGACCCCAGGGACTTGCCTTCCCCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR GCA 90 bp CCCCCACGCTCACCCAGGTCCAGTCTCAGGCCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGG +
Preference number: 1 (lower is better)
Translates to: PPRSPRSSLRPCLSA*GSQTGSTPPQGLWG
Trigger: CCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGACCTGGGTGAGCGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR GCA 90 bp GGCACAGCAGCTTCTGGGGACATCTCCAGGACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: GTAASGDISRTQDPW*HLVQVRDPWACWQQ
Trigger: CTGCTGCCAGCAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR TCA 90 bp GCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCACAGCGCTGTaGGGCACAGCAGCTTCTGGGGACATCTCCAGGACTCAGGACCCT +
Preference number: 1 (lower is better)
Translates to: ASQPVCPRRVWLTAL*GTAASGDISRTQDP
Trigger: AGGGTCCTGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCTCACAGCGCTGTGAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CCA 90 bp CCCAAGGAGGGTCTGGCTCACAGCGCTGTGAGGCACAGCAGCTTCTaGGGACATCTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: PKEGLAHSAVRHSSF*GHLQDSGPLVPPGA
Trigger: TGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCTCACAGCGCTGTGAGCCAGACCCTCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR TCA 90 bp AGGGGGCAGACCCAGACTCCAGGCCTGAGTTCTAGCCAAACAGGCTaGGAAGTCCAGATGGACGGTGGGACCCCCACAGATCTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: RGQTQTPGLSSSQTG*EVQMDGGTPTDLLG
Trigger: CCCAAGGAGATCTGTGGGGGTCCCACCGTCCATCTGGACTTCTCAGCCTGTTTGGCTAGAACTCAGGCCTGGAGTCTGGGTCTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp ACACCACCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTaGAAACCCATGGAGGACCCTGCCTACAGCCCACTGGGAGAGATC +
Preference number: 1 (lower is better)
Translates to: TPPVPVGDPGASDGG*KPMEDPAYSPLGEI
Trigger: GATCTCTCCCAGTGGGCTGTAGGCAGGGTCCTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 90 bp CTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTaGAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCAGT +
Preference number: 1 (lower is better)
Translates to: LVVWPERSPHQQWPK*RECLAPGTQAPIPS
Trigger: ACTGGGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp CATCCTCTCACTCGCATGCCTGCTGTGCCCCATGCTCTGGGGCTGTaGGGTGCCTGTACACGAGCAGTTGTCAATGGTCTCAACACACAC +
Preference number: 1 (lower is better)
Translates to: HPLTRMPAVPHALGL*GACTRAVVNGLNTH
Trigger: GTGTGTGTTGAGACCATTGACAACTGCTCGTGTACAGGCACCCCACAGCCCCAGAGCATGGGGCACAGCAGGCATGCGAGTGAGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 90 bp CTCTGTGAAGGGCACCGTGGAGACTATGGCAGCATGAGCCAGGGTTaGAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCACTC +
Preference number: 1 (lower is better)
Translates to: LCEGHRGDYGSMSQG*RLPELWPQGLSSSL
Trigger: GAGTGATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGCCCTTCACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 90 bp AACACACACCTGGGCATGGCCATTCTGCCACTACCAAGCCCTCTGTaGAGGGCACCGTGGAGACTATGGCAGCATGAGCCAGGGTTGAAG +
Preference number: 1 (lower is better)
Translates to: NTHLGMAILPLPSPL*RAPWRLWQHEPGLK
Trigger: CTTCAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp GGGGTGCCTGTACACGAGCAGTTGTCAATGGTCTCAACACACACCTaGGCATGGCCATTCTGCCACTACCAAGCCCTCTGTGAAGGGCAC +
Preference number: 1 (lower is better)
Translates to: GVPVHEQLSMVSTHT*AWPFCHYQALCEGH
Trigger: GTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGTGTACAGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp CCATGCTCTGGGGCTGTGGGGTGCCTGTACACGAGCAGTTGTCAATaGTCTCAACACACACCTGGGCATGGCCATTCTGCCACTACCAAG +
Preference number: 1 (lower is better)
Translates to: PCSGAVGCLYTSSCQ*SQHTPGHGHSATTK
Trigger: CTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGTGTACAGGCACCCCACAGCCCCAGAGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 90 bp CCTGAGCGTACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTaGTGGCACTGTACCCTCCAAGCCCAGAGAACAACCAGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: PERTSTAPTSIGQGS*WHCTLQAQRTTRVV
Trigger: CACCACCCTGGTTGTTCTCTGGGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTACGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 90 bp GAGCAGTTGTCAATGGTCTCAACACACACCTGGGCATGGCCATTCTaGCACTACCAAGCCCTCTGTGAAGGGCACCGTGGAGACTATGGC +
Preference number: 1 (lower is better)
Translates to: EQLSMVSTHTWAWPF*HYQALCEGHRGDYG
Trigger: GCCATAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp GCACTGTACCCTCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTaGATTATAAATCCTCAGATCACTCGGGCACCTTGGGCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: ALYPPSPENNQGGVA*IINPQITRAPWACP
Trigger: TGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGGGTACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp GAACCCCTATCCATACTGGAACTGCTGAGGTGCCATTATTGCTTCTaGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCC +
Preference number: 1 (lower is better)
Translates to: EPLSILELLRCHYCF*PCGLAGKEPPPTMA
Trigger: GGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp CCTGTACACGAGCAGTTGTCAATGGTCTCAACACACACCTGGGCATaGCCATTCTGCCACTACCAAGCCCTCTGTGAAGGGCACCGTGGA +
Preference number: 1 (lower is better)
Translates to: PVHEQLSMVSTHTWA*PFCHYQALCEGHRG
Trigger: TCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGTGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 90 bp AAACAGGAACCCCTATCCATACTGGAACTGCTGAGGTGCCATTATTaGTTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACA +
Preference number: 1 (lower is better)
Translates to: KQEPLSILELLRCHY*FWPCGLAGKEPPPT
Trigger: TGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGGTTCCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 90 bp ATCCATACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTaGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGAA +
Preference number: 1 (lower is better)
Translates to: IHTGTAEVPLLLLAL*SGRKGAPTNNGPSE
Trigger: TTCACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 90 bp AAGCTAGTAAAACAGGAACCCCTATCCATACTGGAACTGCTGAGGTaGCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCC +
Preference number: 1 (lower is better)
Translates to: KLVKQEPLSILELLR*HYCFWPCGLAGKEP
Trigger: GGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGGTTCCTGTTTTACTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCGGGTCCCTCCTGGAGTaGGCCCTGACTCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPGSLLE*ALTPGP
Trigger: GGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCC...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 2 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRQALPQ*LRLSDW
Trigger: CCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACTGGCCAACCCCTCTaGCACAGGCCTTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRTGQPL*HRPWQR
Trigger: CCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCAGT...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGGGGGCACTTGGGAGTaGGATGCCCTCCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDGGTWE*DALHQL
Trigger: GAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTGTGAGCAGCCGCCCTaGCCCTGCCCCACTAATAGC +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLCEQPP*PCPTNS
Trigger: GCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCTCTGCCCCCAAAGCTaGTGCTGCCAGTCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRLCPQS*CCQSAC
Trigger: ACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCGAGGGACGAGGACGCTaGAGCCAGCCAGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPEGRGR*SQPGTG
Trigger: ACCTGTCCCTGGCTGGCTCCAGCGTCCTCGTCCCTC...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTGCCCCCAAAGCTGGTaGTGCCAGTCAGCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLCPQSW*CQSACL
Trigger: CAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGCA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGGGTCCCTCCTGGAGTaGGCCCTGACTCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTGSLLE*ALTPGP
Trigger: GGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTCCCCGGGAAGGCAGTaGGTCCCTCCTGGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLSPGRQ*VPPGVG
Trigger: GCCCACTCCAGGAGGGACCCACTGCCTTCCCGGGGA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCGGGGGCACTTGGGAGTaGGATGCCCTCCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLGGTWE*DALHQL
Trigger: GAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCC...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCACCAGCTCTGGGGCCTaGCAGCCTGCATACCCCTCC +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLTSSGA*QPAYPS
Trigger: GGAGGGGTATGCAGGCTGGCAGGCCCCAGAGCTGGT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDPCLSA*GSQTGS
Trigger: AGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCTCTGCCCCCAAAGCTaGTGCTGCCAGTCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPLCPQS*CCQSAC
Trigger: ACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCGGGGGCACTTGGGAGTaGGATGCCCTCCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLGGTWE*DALHQL
Trigger: GAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCC...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 2 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCTCTGGCACAGGCCTTaGCAGAGGGACTGGCCACAC +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLLWHRP*QRDWPH
Trigger: GTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCCAGAG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 2 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGAGGCACAGCAGCTTCTaGGGACATCTCCAGGACTCA +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLRHSSF*GHLQDS
Trigger: TGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CAA 90 bp GTGAGGCACAGCAGCTTCTGGGGACATCTCCAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VRHSSFWGHLQDSGP*VPPGAGQGSLGLLA
Trigger: TGCCAGCAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCCACTAATAGCACCTTaGAACCCTACCAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLPLIAP*NPTSTA
Trigger: GGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAGGGATCCCTGGGCCTaGTGGCAGCAGAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGRDPWA*WQQSGW
Trigger: CCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGACCCAGGCTCCAACTaGCCAACCCCTCTGGCACAG +
Preference number: 2 (lower is better)
Translates to: PACPTPHSEALVCSLRTSDPGSN*PTPLAQ
Trigger: CTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGACCCAGGCTCCAACTaGCCAACCCCTCTGGCACAG +
Preference number: 2 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVDPGSN*PTPLAQ
Trigger: CTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGGCCAGAGTAGCTGGTaGGGAACTGGGGTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLGQSSW*GTGVLC
Trigger: ACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCTCTGGCACAGGCCTTaGCAGAGGGACTGGCCACAC +
Preference number: 2 (lower is better)
Translates to: YGLTGLSLATATQAYSGCLWHRP*QRDWPH
Trigger: GTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCCAGAG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGACCCTTGGTGCCACCTaGTGCAGGTCAGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVTLGAT*CRSGIP
Trigger: AGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCCTAGAGCGGGCCTTTaGGGGAGCAGAGATGGACAC +
Preference number: 2 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVPRAGL*GSRDGH
Trigger: GTGTCCATCTCTGCTCCCCCAAAGGCCCGCTCTAGG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGCCAGGGACAGGTTGTaGCAGGACCTAGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVARDRL*QDLEGG
Trigger: TCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGGGCAAGGAAGCTGCTaGCACTGTACCCTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLGQGSC*HCTLQA
Trigger: GGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAACTGGGGTGCTCTGTaGGCAGCCGCCCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQNWGAL*AAALPL
Trigger: CAGGGGCAGGGCGGCTGCTCACAGAGCACCCCAGTT...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGPCLSA*GSQTGS
Trigger: AGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCTCATCCTAGGACTCTaGCCCCAAAGCTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVLILGL*PQSWCC
Trigger: GCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCTGTGAGCAGCCGCCCTaGCCCTGCCCCACTAATAGC +
Preference number: 2 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLCEQPP*PCPTNS
Trigger: GCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACA...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCACTGGCCAACCCCTCTaGCACAGGCCTTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLTGQPL*HRPWQR
Trigger: CCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCAGT...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 2 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGTTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: PACPTPHSEALVCSLRTSLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCACACAGTGAAGCACTaGTCTGCAGTCTCCGCACCT +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLHTVKH*SAVSAP
Trigger: AGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCAGGCACAGCAGCTTCTaGGGACATCTCCAGGACTCA +
Preference number: 2 (lower is better)
Translates to: APKAGAASQPVCPRRVWLRHSSF*GHLQDS
Trigger: TGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CAA 90 bp GTGCTCTGTGAGCAGCCGCCCTGCCCCTGCCCCACTAATAGCACCTaGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGC +
Preference number: 2 (lower is better)
Translates to: VLCEQPPCPCPTNST*KPYQHCPSLILGLC
Trigger: GCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CAA 90 bp CAGGAGAGGGGTTGGTTGTGCCCACCTAGAGCTCCCGTGACCGTCTaGACCAGCTGTCAAGCTGTCTGGTCAGCTGTCTGGACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: QERGWLCPPRAPVTV*TSCQAVWSAVWTPH
Trigger: GTGAGGGGTCCAGACAGCTGACCAGACAGCTTGACAGCTGGTCAAGACGGTCACGGGAGCTCTAGGTGGGCACAACCAACCCCTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGGGCCAGAGTAGCTGGTaGGGAACTGGGGTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEGQSSW*GTGVLC
Trigger: ACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGGGACTGGCCACACCTaGTGCCCAGGCCCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: STLKPYQHCPSLILGLCPGTGHT*CPGPFL
Trigger: AAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTAGTGAAGCACTGGTCTaGAGTCTCCGCACCTCGCCA +
Preference number: 2 (lower is better)
Translates to: YGLTGLSLATATQAYSGCSEALV*SLRTSP
Trigger: TGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACT...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGCTCCCTGCCCCAGTaGCATGGGCCTCATAAGGTC +
Preference number: 2 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLSSLPQ*HGPHKV
Trigger: GACCTTATGAGGCCCATGGCACTGGGGCAGGGAGCT...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGGTCCCTCCTGGAGTaGGCCCTGACTCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKGSLLE*ALTPGP
Trigger: GGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGAGGACTCAGGACCCTTaGTGCCACCTGGTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVRTQDP*CHLVQV
Trigger: GACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCT...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGAGGGACGAGGACGCTaGAGCCAGCCAGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIEGRGR*SQPGTG
Trigger: ACCTGTCCCTGGCTGGCTCCAGCGTCCTCGTCCCTC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCCAAACCCTCCAAGATaGGGAAGCAAATTAGGGGCA +
Preference number: 2 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLPNPPR*GSKLGA
Trigger: TGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTGG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGTCTGGACCCCTCACCTaGTCCCAGAGGGGAAGTGTA +
Preference number: 2 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVSGPLT*SQRGSV
Trigger: TACACTTCCCCTCTGGGATCAGGTGAGGGGTCCAGA...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGGGACTGGCCACACCTaGTGCCCAGGCCCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQGTGHT*CPGPFL
Trigger: AAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: STLKPYQHCPSLILGLCPTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCCCAGCTCCAAAGAGCTaGCAGGCACTGGGACTAGAG +
Preference number: 2 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLPAPKS*QALGLE
Trigger: CTCTAGTCCCAGTGCCTGGCAGCTCTTTGGAGCTGG...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTCCCCGGGAAGGCAGTaGGTCCCTCCTGGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSPGRQ*VPPGVG
Trigger: GCCCACTCCAGGAGGGACCCACTGCCTTCCCGGGGA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCCACTCCAGCCATGCTaGGAAGGCAATAGTGTCGGG +
Preference number: 2 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEPLQPC*EGNSVG
Trigger: CCCGACACTATTGCCTTCCCAGCATGGCTGGAGTGG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGCTCCTATCCCCAGTaGGGCAGGGGCCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKGSYPQ*GRGLPG
Trigger: TCCTGGGAGGCCCCTGCCCCACTGGGGATAGGAGCC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCATCCCCCGAGGGGCCTaGACATGCAGGCTCCTTTAC +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIIPRGA*TCRLLY
Trigger: GTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGAT...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTAAACCCTACCAGCACTaGCCAAGCCTCATCCTAGGA +
Preference number: 2 (lower is better)
Translates to: YGLTGLSLATATQAYSGCKPYQH*PSLILG
Trigger: TCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTT...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 2 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCTTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: STLKPYQHCPSLILGLCPLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGAATAGTGTCGGGGAGTaGTGGGGGTTTAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLNSVGE*WGFKVQ
Trigger: TTGCACCTTAAACCCCCACCACTCCCCGACACTATT...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 90 bp GGCACTGTACCCTCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGATCACTCGGGCACCTTGGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GTVPSKPREQPGWCG*DYKSSDHSGTLGLP
Trigger: GGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGGGTACAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 90 bp GGACAGCAGGAGCGCCTGAGCGTACGTCTACAGCTCCAACATCAATaGGGCAAGGAAGCTGCTGGCACTGTACCCTCCAAGCCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: GQQERLSVRLQLQHQ*GKEAAGTVPSKPRE
Trigger: TTCTCTGGGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTACGCTCAGGCGCTCCTGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 2 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGAGTGTCGGGGAGTGGTaGGGGTTTAAGGTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVSVGEW*GFKVQR
Trigger: TCTTTGCACCTTAAACCCCCACCACTCCCCGACACT...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGACCAGCTCTGGGGCCTaGCAGCCTGCATACCCCTCC +
Preference number: 2 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSTSSGA*QPAYPS
Trigger: GGAGGGGTATGCAGGCTGGCAGGCCCCAGAGCTGGT...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 2 (lower is better)
Translates to: YVYSSNINWARKLLALYPPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCACACTTGTTCCTTCTaGTGTGGGATATATGGCCAG +
Preference number: 2 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGHTCSF*CGIYGQ
Trigger: CTGGCCATATATCCCACACCAGAAGGAACAAGTGTG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGTTAGTGCTAGCCTCATaGGGGCAAGCAATTGGGTCT +
Preference number: 2 (lower is better)
Translates to: PVPVGDPGASDGGWKPMELVLAS*GQAIGS
Trigger: AGACCCAATTGCTTGCCCCCATGAGGCTAGCACTAA...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGAGCTCCAACATCAATTaGGCAAGGAAGCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVSSNIN*ARKLLA
Trigger: TGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCT...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 90 bp CCTATCCATACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTaGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: PIHTGTAEVPLLLLA*WSGRKGAPTNNGPS
Trigger: ACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCCACTAATAGCACCTTaGAACCCTACCAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIPLIAP*NPTSTA
Trigger: GGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPCLSA*GSQTGS
Trigger: AGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCAGCCGCCCTGCCCCTaGCCCACTAATAGCACCTTG +
Preference number: 2 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSQPPCP*PTNSTL
Trigger: CAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCTTCCCACTCCAGCCATaGTGGGAAGGCAATAGTGTC +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIFPLQP*WEGNSV
Trigger: GACACTATTGCCTTCCCAGCATGGCTGGAGTGGGAA...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCGGGCACCTTGGGCCTaGCCAAATCTGTACAGAATA +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIRAPWA*PNLYRI
Trigger: TATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCATTGGGCAAGGAAGCTaGTGGCACTGTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIIGQGS*WHCTLQ
Trigger: TTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAAT...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAAGTGAAGCACTGGTCTaGAGTCTCCGCACCTCGCCA +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSEALV*SLRTSP
Trigger: TGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACTCATCCTAGGACTCTaGCCCCAAAGCTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPLILGL*PQSWCC
Trigger: GCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR GCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCTTCCCACTCCAGCCATaGTGGGAAGGCAATAGTGTC +
Preference number: 2 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPFPLQP*WEGNSV
Trigger: GACACTATTGCCTTCCCAGCATGGCTGGAGTGGGAA...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACACAGTGAAGCACTaGTCTGCAGTCTCCGCACCT +
Preference number: 2 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGHTVKH*SAVSAP
Trigger: AGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTG...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGCCAAACCCTCCAAGATaGGGAAGCAAATTAGGGGCA +
Preference number: 2 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEPNPPR*GSKLGA
Trigger: TGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTGG...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR TCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGATCCCCCGAGGGGCCTaGACATGCAGGCTCCTTTAC +
Preference number: 2 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLIPRGA*TCRLLY
Trigger: GTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGAT...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGAGCTCCCTGCCCCAGTaGCATGGGCCTCATAAGGTC +
Preference number: 2 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLSSLPQ*HGPHKV
Trigger: GACCTTATGAGGCCCATGGCACTGGGGCAGGGAGCT...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCCTAGAGCGGGCCTTTaGGGGAGCAGAGATGGACAC +
Preference number: 2 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLPRAGL*GSRDGH
Trigger: GTGTCCATCTCTGCTCCCCCAAAGGCCCGCTCTAGG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCTTAGTGCTAGCCTCATaGGGGCAAGCAATTGGGTCT +
Preference number: 2 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPLVLAS*GQAIGS
Trigger: AGACCCAATTGCTTGCCCCCATGAGGCTAGCACTAA...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIQALPQ*LRLSDW
Trigger: CCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATAGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATAAGGACTCAGGACCCTTaGTGCCACCTGGTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIRTQDP*CHLVQV
Trigger: GACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCT...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATAATAGTGTCGGGGAGTaGTGGGGGTTTAAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDNSVGE*WGFKVQ
Trigger: TTGCACCTTAAACCCCCACCACTCCCCGACACTATT...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 90 bp GGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGGGCACCTaGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTG +
Preference number: 2 (lower is better)
Translates to: GWCGLDYKSSDHSGT*GLPKSVQNKVLRLL
Trigger: CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGTGGGGGTTTAAGGTaGAAAGAGTATAACAAACAA +
Preference number: 2 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKGGGLR*KEYNKQ
Trigger: TTGTTTGTTATACTCTTTGCACCTTAAACCCCCACC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACACACTTGTTCCTTCTaGTGTGGGATATATGGCCAG +
Preference number: 2 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIHTCSF*CGIYGQ
Trigger: CTGGCCATATATCCCACACCAGAAGGAACAAGTGTG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTC +
Preference number: 3 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRALPQC*RLSDWV
Trigger: GACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGT +
Preference number: 3 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDQDSGP*VPPGAG
Trigger: ACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CCA 72 bp TGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTaGCAGCAGAGTGGGTGGGGAAGGCAAGTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: CHLVQVRDPWAC*QQSGWGRQVPG
Trigger: CCCAGGGACTTGCCTTCCCCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CCA 72 bp GGCCTGAACATGCAGGCTCCTTTACCGGCAGTGCTATaGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: GLNMQAPLPAVL*APHPPVHRPRR
Trigger: CCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 3 (lower is better)
Translates to: APKAGAASQPVCPRRVWLTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 3 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR GCA 72 bp GGCACAGGCCTTGGCAGAGGGACTGGCCACACCTGCTaGCCAGGCCCCTTTCTTTCTGCTGCAGACCCCCAG +
Preference number: 3 (lower is better)
Translates to: GTGLGRGTGHTC*PGPFLSAADPQ
Trigger: CTGGGGGTCTGCAGCAGAAAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CCA 72 bp GGGACATCTCCAGGACTCAGGACCCTTGGTGCCACCTaGTGCAGGTCAGGGATCCCTGGGCCTGCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: GTSPGLRTLGAT*CRSGIPGPAGS
Trigger: GCTGCCAGCAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAGATGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTC +
Preference number: 3 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLALPQC*RLSDWV
Trigger: GACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGT +
Preference number: 3 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGQDSGP*VPPGAG
Trigger: ACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 3 (lower is better)
Translates to: STLKPYQHCPSLILGLCPTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR-3UTR CAA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCCATGGGGGCAAGCAATaGGGTCTAGGCTGCGCCTCC +
Preference number: 3 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLHGGKQ*GLGCAS
Trigger: GGAGGCGCAGCCTAGACCCAATTGCTTGCCCCCATG...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp CCTGTCTGCCCAAGGAGGGTCTGGCTCACAGCGCTGTaGGGCACAGCAGCTTCTGGGGACATCTCCAGGACT +
Preference number: 3 (lower is better)
Translates to: PVCPRRVWLTAL*GTAASGDISRT
Trigger: AGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCTCACAGCGCTGTGAGCCAGACCCTCCTTGGGCAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR GCA 72 bp ACGCTCACCCAGGTCCAGTCTCAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGGGTCTACACCTCCTCA +
Preference number: 3 (lower is better)
Translates to: TLTQVQSQALPQ*LRLSDWVYTSS
Trigger: TGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGACCTGGGTGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CCA 72 bp GTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTaGAAACCCATGGAGGACCCTGCCTACAGCCCACTG +
Preference number: 3 (lower is better)
Translates to: VPVGDPGASDGG*KPMEDPAYSPL
Trigger: CAGTGGGCTGTAGGCAGGGTCCTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp GGGCACCGTGGAGACTATGGCAGCATGAGCCAGGGTTaGAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGT +
Preference number: 3 (lower is better)
Translates to: GHRGDYGSMSQG*RLPELWPQGLS
Trigger: ACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp CCCTCTGTGAAGGGCACCGTGGAGACTATGGCAGCATaGGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: PSVKGTVETMAA*ARVEGSQNCGH
Trigger: GTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGCCCTTCACAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp GGCGAACCTTCTCTCCCCCAGGACAGCAGGAGCGCCTaGGCGTACGTCTACAGCTCCAACATCAATTGGGCA +
Preference number: 3 (lower is better)
Translates to: GEPSLPQDSRSA*AYVYSSNINWA
Trigger: TGCCCAATTGATGTTGGAGCTGTAGACGTACGCTCAGGCGCTCCTGCTGTCCTGGGGGAGAGAAGGTTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp TGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTaGAGAGAGTGCTTAGCACCAGGGACACAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: WPERSPHQQWPK*RECLAPGTQAP
Trigger: AGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp CTGGGCATGGCCATTCTGCCACTACCAAGCCCTCTGTaGAGGGCACCGTGGAGACTATGGCAGCATGAGCCA +
Preference number: 3 (lower is better)
Translates to: LGMAILPLPSPL*RAPWRLWQHEP
Trigger: TGGCTCATGCTGCCATAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATaGAGGACCCTGCCTACAGCCCACTGGGAGAGATCA +
Preference number: 3 (lower is better)
Translates to: EILVPVMGVGNP*RTLPTAHWERS
Trigger: TGATCTCTCCCAGTGGGCTGTAGGCAGGGTCCTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GGGGCTGTGGGGTGCCTGTACACGAGCAGTTGTCAATaGTCTCAACACACACCTGGGCATGGCCATTCTGCC +
Preference number: 3 (lower is better)
Translates to: GAVGCLYTSSCQ*SQHTPGHGHSA
Trigger: GGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGTGTACAGGCACCCCACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCAGCTCCAACATCAATaGGGCAAGGAAGCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEQLQHQ*GKEAAG
Trigger: GCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTaGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGC +
Preference number: 3 (lower is better)
Translates to: GTAEVPLLLLAL*SGRKGAPTNNG
Trigger: GCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGAT +
Preference number: 3 (lower is better)
Translates to: YGLTGLSLATATQAYSGCPGWCG*DYKSSD
Trigger: ATCTGAGGATTTATAATCCAAGCCACACCACCCTGG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 72 bp CCCCTATCCATACTGGAACTGCTGAGGTGCCATTATTaGTTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: PLSILELLRCHY*FWPCGLAGKEP
Trigger: GGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 72 bp TCAATGGTCTCAACACACACCTGGGCATGGCCATTCTaGCACTACCAAGCCCTCTGTGAAGGGCACCGTGGA +
Preference number: 3 (lower is better)
Translates to: SMVSTHTWAWPF*HYQALCEGHRG
Trigger: TCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp TCCATACTGGAACTGCTGAGGTGCCATTATTGCTTCTaGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCA +
Preference number: 3 (lower is better)
Translates to: SILELLRCHYCF*PCGLAGKEPPP
Trigger: TGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGAT +
Preference number: 3 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEPGWCG*DYKSSD
Trigger: ATCTGAGGATTTATAATCCAAGCCACACCACCCTGG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR-3UTR CAA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACAGGACAGGGTTTCATaGCCAGCTCCCCACCAGTGT +
Preference number: 3 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKQDRVS*PAPHQC
Trigger: ACACTGGTGGGGAGCTGGCAATGAAACCCTGTCCTG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GAGCAGTTGTCAATGGTCTCAACACACACCTGGGCATaGCCATTCTGCCACTACCAAGCCCTCTGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: EQLSMVSTHTWA*PFCHYQALCEG
Trigger: CCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp GTCAAGCTGTCTGGTCAGCTGTCTGGACCCCTCACCTaGTCCCAGAGGGGAAGTGTACAAGAACATGAAACC +
Preference number: 3 (lower is better)
Translates to: VKLSGQLSGPLT*SQRGSVQEHET
Trigger: GGTTTCATGTTCTTGTACACTTCCCCTCTGGGATCAGGTGAGGGGTCCAGACAGCTGACCAGACAGCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp CCTCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTaGATTATAAATCCTCAGATCACTCGGGCACCTTGG +
Preference number: 3 (lower is better)
Translates to: PPSPENNQGGVA*IINPQITRAPW
Trigger: CCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GTACACGAGCAGTTGTCAATGGTCTCAACACACACCTaGGCATGGCCATTCTGCCACTACCAAGCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: VHEQLSMVSTHT*AWPFCHYQALC
Trigger: ACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR TCA 72 bp CCTCACCTGATCCCAGAGGGGAAGTGTACAAGAACATaGAACCCATGTCCCAGGACAGGGTTTCATTGCCAG +
Preference number: 3 (lower is better)
Translates to: PHLIPEGKCTRT*NPCPRTGFHCQ
Trigger: CTGGCAATGAAACCCTGTCCTGGGACATGGGTTTCATGTTCTTGTACACTTCCCCTCTGGGATCAGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GGCACTGTACCCTCCAAGCCCAGAGAACAACCAGGGTaGTGTGGCTTGGATTATAAATCCTCAGATCACTCG +
Preference number: 3 (lower is better)
Translates to: GTVPSKPREQPG*CGLDYKSSDHS
Trigger: CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGGGTACAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CCA 72 bp GCTTGGATTATAAATCCTCAGATCACTCGGGCACCTTaGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: AWIINPQITRAP*ACPNLYRIKCF
Trigger: GAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR GCA 72 bp ATTATAAATCCTCAGATCACTCGGGCACCTTGGGCCTaGCCAAATCTGTACAGAATAAAGTGCTTCGTTTAT +
Preference number: 3 (lower is better)
Translates to: IINPQITRAPWA*PNLYRIKCFVY
Trigger: ATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGGGGGTCTGCCCGGCTaGTTCGGCTTCCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRGGLPG*FGFPVA
Trigger: GGCCACGGGGAAGCCGAAGCAGCCGGGCAGACCCCC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
74% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGGCGGCGCAGCTGGAGTaGAGCTGGCAGCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLAAQLE*SWQPAG
Trigger: CCCAGCCGGCTGCCAGCTGCACTCCAGCTGCGCCGC...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCGGCCCTCGGGCCGATaGAGAGGCCACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDRPSGR*RGHSRG
Trigger: CCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGAACTGGGGTGCTCTGTaGGCAGCCGCCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLNWGAL*AAALPL
Trigger: CAGGGGCAGGGCGGCTGCTCACAGAGCACCCCAGTT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCGCCGGGGCTGGCAGTaGTGGGGAAGAGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPARRGWQ*WGRAEA
Trigger: CGCCTCCGCTCTTCCCCACCACTGCCAGCCCCGGCG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTGGTGGCAGGCACTGTaGCACCAGCAGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLWWQAL*HQQSLP
Trigger: GGGCAGGGACTGCTGGTGGCACAGTGCCTGCCACCA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCGCTCGCAGTCTGTCTaGCTGTGCAGCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRRSQSV*LCSSSS
Trigger: CGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGATCTTGGGCAGGCCTaGGGTGTCGGCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRDLGQA*GVGLLL
Trigger: AAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCTGTGCCCCATGCTCTaGGGCTGTGGGGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRLCPML*GCGVPV
Trigger: TACAGGCACCCCACAGCCCCAGAGCATGGGGCACAG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTGGTGGCAGGCACTGTaGCACCAGCAGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDWWQAL*HQQSLP
Trigger: GGGCAGGGACTGCTGGTGGCACAGTGCCTGCCACCA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGGCCCCGTGGACACGTaGAGTGTCTGGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRGPVDT*SVWLLR
Trigger: CCTCAACAACCAGACACTGCACGTGTCCACGGGGCC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGGGGACTGGCCACACCTaGTGCCCAGGCCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLGTGHT*CPGPFL
Trigger: AAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCC...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLQALPQ*LRLSDW
Trigger: CCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGTAGGGCGGCGCAGCTaGAGTGCAGCTGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGVGRRS*SAAGSR
Trigger: CCGGCTGCCAGCTGCACTCCAGCTGCGCCGCCCTAC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGCTGGGCTGGCCCAATaGTGGCAGGCACTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDAGLAQ*WQALCH
Trigger: GTGGCACAGTGCCTGCCACCATTGGGCCAGCCCAGC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGAAAGAAGGGCTGGGCTaGCCCAATGGTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRKEGLG*PNGGRH
Trigger: GTGCCTGCCACCATTGGGCCAGCCCAGCCCTTCTTT...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGGCCCAGAACCACGGTaGCTGGGCTTGGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGGPEPR*LGLARH
Trigger: GTGCCGGGCCAAGCCCAGCCACCGTGGTTCTGGGCC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCTCCCGGGACCGTGTaGCCATGTGACTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSPGTV*PCDCGE
Trigger: CTCCCCACAGTCACATGGCCACACGGTCCCGGGAGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCGCCGGGGCTGGCAGTaGTGGGGAAGAGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVRRGWQ*WGRAEA
Trigger: CGCCTCCGCTCTTCCCCACCACTGCCAGCCCCGGCG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGCCAGGGACAGGTTGTaGCAGGACCTAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRARDRL*QDLEGG
Trigger: TCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTTACCGGCAGTGCTATaGGCGCCCCACCCACCGGTG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDLPAVL*APHPPV
Trigger: CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGATCCCCCGAGGGGCCTaGACATGCAGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLIPRGA*TCRLLY
Trigger: GTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGAT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCCCAGGCCCCACTGTaGCCCTCTAGCCGTGTGACC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLAQAPL*PSSRVT
Trigger: GGTCACACGGCTAGAGGGGCACAGTGGGGCCTGGGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGGGCCAGGGCCACAGTaGCCGGACCTGGTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVGPGPQ*PDLVGL
Trigger: TAGGCCCACCAGGTCCGGGCACTGTGGCCCTGGCCC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTCGTCCGAGTGTCTCTaGAGCCCGTCCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLSSECL*SPSSRP
Trigger: GGGCCGGGAGGACGGGCTGCAGAGACACTCGGACGA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCGGCCCTCGGGCCGATaGAGAGGCCACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGRPSGR*RGHSRG
Trigger: CCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCACCAGCTCTGGGGCCTaGCAGCCTGCATACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPATSSGA*QPAYPS
Trigger: GGAGGGGTATGCAGGCTGGCAGGCCCCAGAGCTGGT...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCTCCTTTACCGGCAGTaGTATGGGCGCCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPLLYRQ*YGRPTH
Trigger: GTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCTCGCATGCCTGCTGTaGCCCATGCTCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPLACLL*PMLWGC
Trigger: ACAGCCCCAGAGCATGGGGCACAGCAGGCATGCGAG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCTCACTCGCATGCCTaGTGTGCCCCATGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSHSHA*CAPCSG
Trigger: CCCAGAGCATGGGGCACAGCAGGCATGCGAGTGAGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCAACCAGCAACATGGTaGCGTGGCGCTGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPQPATW*RGAGGS
Trigger: TGAGCCCCCAGCGCCACGGCACCATGTTGCTGGTTG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGTAGGGCGGCGCAGCTaGAGTGCAGCTGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTVGRRS*SAAGSR
Trigger: CCGGCTGCCAGCTGCACTCCAGCTGCGCCGCCCTAC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGCACGGTGGCTGGGCTTaGCCCGGCACCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSHGGWA*PGTWLP
Trigger: GGGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTG...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCAGAACCACGGTGGCTaGGCTTGGCCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLQNHGG*AWPGTW
Trigger: CCAGGTGCCGGGCCAAGCCCAGCCACCGTGGTTCTG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGGCCCAGAACCACGGTaGCTGGGCTTGGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSGPEPR*LGLARH
Trigger: GTGCCGGGCCAAGCCCAGCCACCGTGGTTCTGGGCC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCAGCCCATCAGTGGCTaGCGGCCCTCGGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRQPISG*RPSGRC
Trigger: GCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCGGCAGTGCGTGCGCCTaGGGCTGGGTTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGGSACA*GWVGGR
Trigger: CCTGCCCCCAACCCAGCCCCAGGCGCACGCACTGCC...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCGACCCAGGCTCCAACTaGCCAACCCCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPDPGSN*PTPLAQ
Trigger: CTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTC...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGACCCTTGGTGCCACCTaGTGCAGGTCAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLTLGAT*CRSGIP
Trigger: AGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCAATGAGGCGGCGCTaGGCACCTCGTGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLAMRRR*APRGRW
Trigger: CCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGGGGGCACTTGGGAGTaGGATGCCCTCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLGGTWE*DALHQL
Trigger: GAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCTGGACCCCTCACCTaGTCCCAGAGGGGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSGPLT*SQRGSV
Trigger: TACACTTCCCCTCTGGGATCAGGTGAGGGGTCCAGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGAGCATGAGCCAGGGTTaGAGGCTCCCAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSMSQG*RLPELW
Trigger: CCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCCACCAGCAGTCCCTaGCCCGTCCTCAACACGCAC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLATSSP*PVLNTH
Trigger: GTGCGTGTTGAGGACGGGGCAGGGACTGCTGGTGGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCGGCCCCGTGGACACGTaGAGTGTCTGGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPGPVDT*SVWLLR
Trigger: CCTCAACAACCAGACACTGCACGTGTCCACGGGGCC...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGTCGTCCGAGTGTCTCTaGAGCCCGTCCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSSSECL*SPSSRP
Trigger: GGGCCGGGAGGACGGGCTGCAGAGACACTCGGACGA...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPAPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCTGTGAGCAGCCGCCCTaGCCCTGCCCCACTAATAGC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPACEQPP*PCPTNS
Trigger: GCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACA...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCTCCTTTACCGGCAGTaGTATGGGCGCCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPALLYRQ*YGRPTH
Trigger: GTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCGCTGAGCACCTCGTaGACGTTGGCCGCGTTGACC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLALSTS*TLAALT
Trigger: GGTCAACGCGGCCAACGTCCACGAGGTGCTCAGCGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGACCTCCACGATGATCTaGGATTGCTCCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLTSTMI*DCSLRL
Trigger: CAGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTCCAGGGGGTGGCTTTaGCCTCTTCCCACCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLSRGWL*PLPTPP
Trigger: CGGCGGGGTGGGAAGAGGCCAAAGCCACCCCCTGGA...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCACTTCTGGCATGGATaGTGCTGCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRHFWHG*CCFSSS
Trigger: GCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGGGCAGTGCGTGCGCCTaGGGCTGGGTTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEGSACA*GWVGGR
Trigger: CCTGCCCCCAACCCAGCCCCAGGCGCACGCACTGCC...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCGGGTCCCTCCTGGAGTaGGCCCTGACTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGGSLLE*ALTPGP
Trigger: GGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCC...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTCCCCGGGAAGGCAGTaGGTCCCTCCTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVSPGRQ*VPPGVG
Trigger: GCCCACTCCAGGAGGGACCCACTGCCTTCCCGGGGA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACACCCTTGGTGCCACCTaGTGCAGGTCAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDTLGAT*CRSGIP
Trigger: AGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGT...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTTACCGGCAGTGCTATaGGCGCCCCACCCACCGGTG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLLPAVL*APHPPV
Trigger: CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGGCTCCTATCCCCAGTaGGGCAGGGGCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLGSYPQ*GRGLPG
Trigger: TCCTGGGAGGCCCCTGCCCCACTGGGGATAGGAGCC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGCAATGAGGCGGCGCTaGGCACCTCGTGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTAMRRR*APRGRW
Trigger: CCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCAGCCATCTGCAGCAATaGGGCGGCGCTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGSHLQQ*GGAEHL
Trigger: GAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCT...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCCTCAGAGCTCTCTTaGTCCTGCTCACTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSSELS*SCSLGP
Trigger: AGGGCCTAGTGAGCAGGATCAAGAGAGCTCTGAGGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCGGCCAGGGTGTGGCTaGCGCGGAAGCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRRPGCG*RGSTSP
Trigger: AGGAGAAGTGCTTCCGCGTCAGCCACACCCTGGCCG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCTCCTTGGGAGGGGATaGTCCTGCGTCCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVLLGRG*SCVPLP
Trigger: GGGAAGGGGGACGCAGGATCATCCCCTCCCAAGGAG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCTGGCGGCCTCATGCTaGATAGGGCCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRLAASC*IGPPRA
Trigger: TGCCCTGGGTGGCCCTATGCAGCATGAGGCCGCCAG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGGCTGGAAGAGGCGCTaGTCGTTCAGGCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLGWKRR*SFRRPI
Trigger: GATGGGCCGCCTGAACGAGCAGCGCCTCTTCCAGCC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGCGGCGCAGCTGGAGTaGAGCTGGCAGCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPAAQLE*SWQPAG
Trigger: CCCAGCCGGCTGCCAGCTGCACTCCAGCTGCGCCGC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTCTGGGATTGCTCCCTaGGGCTGTAGGTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDSGIAP*GCRCQN
Trigger: GTTCTGGCACCTACAGCCGCAGGGAGCAATCCCAGA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTCCTCTTCCTCTTCCTaGTCACTGTGCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDSSSSS*SLCPSS
Trigger: GGAGGACGGGCACAGTGAGCAGGAAGAGGAAGAGGA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCACTGGTCGCAGATCTaGATGCGGCTGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDHWSQI*MRLWVT
Trigger: TGTGACCCACAGCCGCATGCAGATCTGCGACCAGTG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCAGCGGGTGCACGGGTaGAGCTCGGCAGCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLQRVHG*SSAASC
Trigger: ACAACTAGCTGCCGAGCTGCACCCGTGCACCCGCTG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGACCAGCTCTGGGGCCTaGCAGCCTGCATACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVTSSGA*QPAYPS
Trigger: GGAGGGGTATGCAGGCTGGCAGGCCCCAGAGCTGGT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGGGACTGGCCACACCTaGTGCCCAGGCCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLGTGHT*CPGPFL
Trigger: AAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGQALPQ*LRLSDW
Trigger: CCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTG...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGTGAAGCACTGGTCTaGAGTCTCCGCACCTCGCCA +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPSEALV*SLRTSP
Trigger: TGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACT...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGCCAGTCAGCCTGTCTaGCCAAGGAGGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGASQPV*PRRVWL
Trigger: GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCTGCCCCCAAAGCTGGTaGTGCCAGTCAGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPACPQSW*CQSACL
Trigger: CAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGCA...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCAGCCGCCCTGCCCCTaGCCCACTAATAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLQPPCP*PTNSTL
Trigger: CAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGCGCTGAGCACCTCGTaGACGTTGGCCGCGTTGACC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSALSTS*TLAALT
Trigger: GGTCAACGCGGCCAACGTCCACGAGGTGCTCAGCGC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCGCTGGGCTGGCCCAATaGTGGCAGGCACTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLAGLAQ*WQALCH
Trigger: GTGGCACAGTGCCTGCCACCATTGGGCCAGCCCAGC...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTCCCCTCTGGCCCCGTaGACACGTGCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLSPLAP*TRAVSG
Trigger: ACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCAGAACCACGGTGGCTaGGCTTGGCCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGQNHGG*AWPGTW
Trigger: CCAGGTGCCGGGCCAAGCCCAGCCACCGTGGTTCTG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGGGCCCAGAACCACGGTaGCTGGGCTTGGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVGPEPR*LGLARH
Trigger: GTGCCGGGCCAAGCCCAGCCACCGTGGTTCTGGGCC...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGGGCATGTCCTTGGTGTaGGCAACCATGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLGMSLV*ATMCLR
Trigger: GCGTAAGCACATGGTTGCCCACACCAAGGACATGCC...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGTCGCCGGCCAGGGTGTaGCTGACGCGGAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRSPARV*LTRKHF
Trigger: GAAGTGCTTCCGCGTCAGCCACACCCTGGCCGGCGA...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGCCCTCCACCAGCTCTaGGGCCTGCCAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVALHQL*GLPACI
Trigger: TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTCTGGCACAGGCCTTaGCAGAGGGACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLLWHRP*QRDWPH
Trigger: GTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCCAGAG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCACTGGCCAACCCCTCTaGCACAGGCCTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLTGQPL*HRPWQR
Trigger: CCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCAGT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCTTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGAGGGACGAGGACGCTaGAGCCAGCCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTEGRGR*SQPGTG
Trigger: ACCTGTCCCTGGCTGGCTCCAGCGTCCTCGTCCCTC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGCCAGTGATGGGGGTTaGAAACCCATGGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDASDGG*KPMEDP
Trigger: AGGGTCCTCCATGGGTTTCCAACCCCCATCACTGGC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTCTGGCCTTGTGGTCTaGCCGGAAAGGAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLSGLVV*PERSPH
Trigger: GTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTCTCAACCAGCAACATaGTGCCGTGGCGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLSQPAT*CRGAGG
Trigger: GCCCCCAGCGCCACGGCACCATGTTGCTGGTTGAGA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGGACGTTGGCCGCGTTaGCCAGCAGCTTGGACGTAT +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLGRWPR*PAAWTY
Trigger: ATACGTCCAAGCTGCTGGTCAACGCGGCCAACGTCC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCGCAGGTCTCGCAGGTaGAGGGCATGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLRRSRR*RACPWC
Trigger: ACACCAAGGACATGCCCTTCACCTGCGAGACCTGCG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCGCACCATTGGCACATaGACTGCTTGTGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLRTIGT*TACGQC
Trigger: ACATTGGCCACAAGCAGTTCATGTGCCAATGGTGCG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGAACTGGGGTGCTCTGTaGGCAGCCGCCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMENWGAL*AAALPL
Trigger: CAGGGGCAGGGCGGCTGCTCACAGAGCACCCCAGTT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGGCCAGAGTAGCTGGTaGGGAACTGGGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGGQSSW*GTGVLC
Trigger: ACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCATCCCCCGAGGGGCCTaGACATGCAGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLIPRGA*TCRLLY
Trigger: GTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGAT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGACAGCAGGAGCGCCTaGGCGTACGTCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVDSRSA*AYVYSS
Trigger: GGAGCTGTAGACGTACGCTCAGGCGCTCCTGCTGTC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCCCAGACTCCAGGCCTaGGTTCTAGCCAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPAPRLQA*VLAKQA
Trigger: AGCCTGTTTGGCTAGAACTCAGGCCTGGAGTCTGGG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCGGCTGGAAGAGGCGCTaGTCGTTCAGGCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGGWKRR*SFRRPI
Trigger: GATGGGCCGCCTGAACGAGCAGCGCCTCTTCCAGCC...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCCTCCTCCCGTCCACTaGCACCACCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGPPPVH*HHLPLP
Trigger: AGGAAGAGGAAGGTGGTGGCAGTGGACGGGAGGAGG...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGTGCTGCAGTGAGTaGACCTTGAGGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDECCSE*TLRDML
Trigger: CAGCATGTCCCTCAAGGTGCACTCACTGCAGCACTC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTGTGGCCAATGTGGATaGTCATGTGTGACCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLCGQCG*SCVTAA
Trigger: AGCTGCGGTCACACATGAGCATCCACATTGGCCACA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCAGCGGGTGCACGGGTaGAGCTCGGCAGCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRQRVHG*SSAASC
Trigger: ACAACTAGCTGCCGAGCTGCACCCGTGCACCCGCTG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGCCAGTCAGCCTGTCTaGCCAAGGAGGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVASQPV*PRRVWL
Trigger: GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGCCAGTCAGCCTGTCTaGCCAAGGAGGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTASQPV*PRRVWL
Trigger: GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCCCCAAAGCTGGTGCTaGCAGTCAGCCTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTPQSWC*QSACLP
Trigger: GGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTGCCCCCAAAGCTGGTaGTGCCAGTCAGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLCPQSW*CQSACL
Trigger: CAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGCA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGCAGCCGCCCTGCCCCTaGCCCACTAATAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLQPPCP*PTNSTL
Trigger: CAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTG...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTGTGAGCAGCCGCCCTaGCCCTGCCCCACTAATAGC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVCEQPP*PCPTNS
Trigger: GCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGAGAGGGGTTGGTTGTaGCCACCTAGAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLERGWL*PPRAPV
Trigger: CACGGGAGCTCTAGGTGGGCACAACCAACCCCTCTC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCTCGCATGCCTGCTGTaGCCCATGCTCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRLACLL*PMLWGC
Trigger: ACAGCCCCAGAGCATGGGGCACAGCAGGCATGCGAG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGTGCAGCTGCTTGTTCTaGGTGAAGAGTGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRCSCLF*VKSEWK
Trigger: CTTCCACTCACTCTTCACCCAGAACAAGCAGCTGCA...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCACGGTGGCTGGGCTTaGCCCGGCACCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPHGGWA*PGTWLP
Trigger: GGGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCTCCAGGGGGTGGCTTTaGCCTCTTCCCACCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLSRGWL*PLPTPP
Trigger: CGGCGGGGTGGGAAGAGGCCAAAGCCACCCCCTGGA...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGAAGCGCTTGCCGCACTaGTCGCAGATCTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLKRLPH*SQICMR
Trigger: CCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTT...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGCCACATGTCACACACTaGATGTTGCGCTCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLPHVTH*MLRSQS
Trigger: AGACTGCGAGCGCAACATCCAGTGTGTGACATGTGG...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGACCCAGGCTCCAACTaGCCAACCCCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLDPGSN*PTPLAQ
Trigger: CTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACCACACAGTGAAGCACTaGTCTGCAGTCTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDHTVKH*SAVSAP
Trigger: AGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTG...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGCCAGGGACAGGTTGTaGCAGGACCTAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGARDRL*QDLEGG
Trigger: TCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGAGTGTCGGGGAGTGGTaGGGGTTTAAGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSVGEW*GFKVQR
Trigger: TCTTTGCACCTTAAACCCCCACCACTCCCCGACACT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACATCACTCGGGCACCTTaGGCCTGCCCAAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDITRAP*ACPNLY
Trigger: GTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGAT...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGGGCAAGGAAGCTGCTaGCACTGTACCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLGQGSC*HCTLQA
Trigger: GGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTGCCATTATTGCTTCTaGCCTTGTGGTCTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLCHYCF*PCGLAG
Trigger: TCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCTGAGAAGTCCAGATaGACGGTGGGACCCCCACAG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLAEKSR*TVGPPQ
Trigger: CTGTGGGGGTCCCACCGTCCATCTGGACTTCTCAGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTAGCAACATGGTGCCGTaGCGCTGGGGGCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCSNMVP*RWGLTG
Trigger: CCCTGTGAGCCCCCAGCGCCACGGCACCATGTTGCT...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680014.1
3UTR CAA 72 bp CTCACCCAGGTCCAGTCTCAGGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LTQVQSQALPQC*RLSDWVYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGACCTGGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCGCAGGTCTCGCAGGTaGAGGGCATGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTRRSRR*RACPWC
Trigger: ACACCAAGGACATGCCCTTCACCTGCGAGACCTGCG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGGGACATGCTGCGCTTaGAGGACTTTCCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLGTCCA*RTFRRS
Trigger: AGACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCTTGTCAGTATGGCCTaGCAGGTCTCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLLVSMA*QVSAWP
Trigger: TGGCCAGGCTGAGACCTGTCAGGCCATACTGACAAG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTTGTCAGTATGGCCTaGCAGGTCTCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGLVSMA*QVSAWP
Trigger: TGGCCAGGCTGAGACCTGTCAGGCCATACTGACAAG...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCTAGTCGCCTCATTCTaGCATCTGGGGGCACATTGT +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPLVASF*HLGAHC
Trigger: ACAATGTGCCCCCAGATGTCAGAATGAGGCGACTAG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCAACTGGCGGCCTCATaGTGCATAGGGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGQLAAS*CIGPPR
Trigger: CCTGGGTGGCCCTATGCAGCATGAGGCCGCCAGTTG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS-3UTR GCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGCGATGTCAGCCATCTaGAGCAATGAGGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSAMSAI*SNEAAL
Trigger: CAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTCTGGGATTGCTCCCTaGGGCTGTAGGTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLSGIAP*GCRCQN
Trigger: GTTCTGGCACCTACAGCCGCAGGGAGCAATCCCAGA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTCCTCTTCCTCTTCCTaGTCACTGTGCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLSSSSS*SLCPSS
Trigger: GGAGGACGGGCACAGTGAGCAGGAAGAGGAAGAGGA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCTTCTGGCATGGATGGTaGTGCTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPFWHGW*CFSSSF
Trigger: GAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAA...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCACTGGTCGCAGATCTaGATGCGGCTGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLHWSQI*MRLWVT
Trigger: TGTGACCCACAGCCGCATGCAGATCTGCGACCAGTG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGCCAGCAGGAAGCGCTTaGCGCACTGGTCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSPAGSA*RTGRRS
Trigger: AGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGG...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCAGTCTGTCTGCCTGTaGAGCAGCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRQSVCL*SSSSLS
Trigger: GGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCGCTCGCAGTCTGTCTaGCTGTGCAGCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGRSQSV*LCSSSS
Trigger: CGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCGTGTGGGCAACCATGTaGTTACGCACGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLVWATM*LRTWAM
Trigger: CATGGCCCACGTGCGTAAGCACATGGTTGCCCACAC...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTPCLSA*GSQTGS
Trigger: AGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGAGGGATCCCTGGGCCTaGTGGCAGCAGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVRDPWA*WQQSGW
Trigger: CCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCT...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGACTCAGGACCCTTGGTaGCACCTGGTGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLTQDPW*HLVQVR
Trigger: CCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGT...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGTGCCCCCAAAGCTGGTaGTGCCAGTCAGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTCPQSW*CQSACL
Trigger: CAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGCA...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCAGCTCCCTGCCCCAGTaGCATGGGCCTCATAAGGTC +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLSSLPQ*HGPHKV
Trigger: GACCTTATGAGGCCCATGGCACTGGGGCAGGGAGCT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCGGGCACCTTGGGCCTaGCCAAATCTGTACAGAATA +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPRAPWA*PNLYRI
Trigger: TATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCCAGCTCCAAAGAGCTaGCAGGCACTGGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLPAPKS*QALGLE
Trigger: CTCTAGTCCCAGTGCCTGGCAGCTCTTTGGAGCTGG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTCTCACTCGCATGCCTaGTGTGCCCCATGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVSHSHA*CAPCSG
Trigger: CCCAGAGCATGGGGCACAGCAGGCATGCGAGTGAGA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCATCCTCTCACTCGCATaGCTGCTGTGCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGILSLA*LLCPML
Trigger: GAGCATGGGGCACAGCAGGCATGCGAGTGAGAGGAT...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCAGCTGGAGTGCAGCTaGCAGCCGGCTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIQLECS*QPAGPG
Trigger: CCCTGGCCCAGCCGGCTGCCAGCTGCACTCCAGCTG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGGGCTGGCCCAATGGTaGCAGGCACTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLGLAQW*QALCHQ
Trigger: CTGGTGGCACAGTGCCTGCCACCATTGGGCCAGCCC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGGGGCTGGCCCAATGGTaGCAGGCACTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVGLAQW*QALCHQ
Trigger: CTGGTGGCACAGTGCCTGCCACCATTGGGCCAGCCC...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGAAGCGCTTGCCGCACTaGTCGCAGATCTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTKRLPH*SQICMR
Trigger: CCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTT...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTCGGCAGCTAGTTGTTaGCGTTCATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVSAASC*RSSSRR
Trigger: CCGGCGGGAGGATGAACGCCAACAACTAGCTGCCGA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCTCTGCCCCCAAAGCTaGTGCTGCCAGTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLLCPQS*CCQSAC
Trigger: ACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCTCTGCCCCCAAAGCTaGTGCTGCCAGTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTLCPQS*CCQSAC
Trigger: ACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCCTAGAGCGGGCCTTTaGGGGAGCAGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLPRAGL*GSRDGH
Trigger: GTGTCCATCTCTGCTCCCCCAAAGGCCCGCTCTAGG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCGCAGGTCTCGCAGGTaGAGGGCATGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCRRSRR*RACPWC
Trigger: ACACCAAGGACATGCCCTTCACCTGCGAGACCTGCG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCGGCCAGGGTGTGGCTaGCGCGGAAGCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPRPGCG*RGSTSP
Trigger: AGGAGAAGTGCTTCCGCGTCAGCCACACCCTGGCCG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGGGGGCACTTGGGAGTaGGATGCCCTCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPGGTWE*DALHQL
Trigger: GAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCCAAACCCTCCAAGATaGGGAAGCAAATTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPPNPPR*GSKLGA
Trigger: TGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTGG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCCAGCCCTGGAAAGTaGGTATGGTGCCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCPSPGK*VWCPSR
Trigger: GCGACTAGGGCACCATACTCACTTTCCAGGGCTGGG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGAGACTATGGCAGCATaGGCCAGGGTTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVETMAA*ARVEGS
Trigger: GGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGAAGTTGAGGATCTGCTaGAGGCCACCAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLKLRIC*RPPGAS
Trigger: ACTGGCACCTGGTGGCCTGCAGCAGATCCTCAACTT...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCATGAAGTTGAGGATCTaGTGCAGGCCACCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLMKLRI*CRPPGA
Trigger: GGCACCTGGTGGCCTGCAGCAGATCCTCAACTTCAT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCCTCTTCTCCCTGACTaGCACCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRPLLPD*HPLPPP
Trigger: AGGAGGAGGAAGAGGGTGGCAGTCAGGGAGAAGAGG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTCACACACTGGATGTTaGGCTCGCAGTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLSHTGC*ARSLSA
Trigger: GGCAGACAGACTGCGAGCGCAACATCCAGTGTGTGA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCTGGGGCCTGCCAGCCTaGATACCCCTCCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIWGLPA*IPLLVG
Trigger: CCCGACGAGGAGGGGTATGCAGGCTGGCAGGCCCCA...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCTCATCCTAGGACTCTaGCCCCAAAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTLILGL*PQSWCC
Trigger: GCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTGCAGCTGCTTGTTCTaGGTGAAGAGTGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDCSCLF*VKSEWK
Trigger: CTTCCACTCACTCTTCACCCAGAACAAGCAGCTGCA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGATCTTGGGCAGGCCTaGGGTGTCGGCCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLDLGQA*GVGLLL
Trigger: AAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCTTGCACAAGCTGGCTaGGGGCCCACCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFILAQAG*GPTGLL
Trigger: GAGGAGGCCGGTGGGCCCCCAGCCAGCTTGTGCAAG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGACCTCCACGATGATCTaGGATTGCTCCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTTSTMI*DCSLRL
Trigger: CAGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGT...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCTCGCCGGCCAGGGTGTaGCTGACGCGGAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPSPARV*LTRKHF
Trigger: GAAGTGCTTCCGCGTCAGCCACACCCTGGCCGGCGA...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGTTGCGGCTCTCAGACTaGGTCTACACCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRLRLSD*VYTSSG
Trigger: CCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAA...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAGGACTCAGGACCCTTaGTGCCACCTGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGRTQDP*CHLVQV
Trigger: GACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCTCTGCCCCCAAAGCTaGTGCTGCCAGTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCLCPQS*CCQSAC
Trigger: ACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGAGGGACGAGGACGCTaGAGCCAGCCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPEGRGR*SQPGTG
Trigger: ACCTGTCCCTGGCTGGCTCCAGCGTCCTCGTCCCTC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTTAGTGCTAGCCTCATaGGGGCAAGCAATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDLVLAS*GQAIGS
Trigger: AGACCCAATTGCTTGCCCCCATGAGGCTAGCACTAA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCAGTAAAGCAGGAGCCTaGAGTCCCCAGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLSKAGA*SPQPWG
Trigger: ACCCCAAGGCTGGGGACTCCAGGCTCCTGCTTTACT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGTCTGGTCAGCTGTCTaGACCCCTCACCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTVWSAV*TPHLIP
Trigger: TGGGATCAGGTGAGGGGTCCAGACAGCTGACCAGAC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGTTGCTTCTGGCCTTGTaGTCTGGCCGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTLLLAL*SGRKGA
Trigger: GGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAA...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGGCACCGTGGAGACTATaGCAGCATGAGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLAPWRL*QHEPGL
Trigger: CAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGC...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCATGCTCTGGGGCTGTaGGGTGCCTGTACACGAGCA +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCHALGL*GACTRA
Trigger: TGCTCGTGTACAGGCACCCCACAGCCCCAGAGCATG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCACCTCCACGATGATCTaGGATTGCTCCCTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLTSTMI*DCSLRR
Trigger: TCGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAATGGTGCCGTGGCGCTaGGGGCTCACAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKMVPWR*GLTGPR
Trigger: GCGGGGCCCTGTGAGCCCCCAGCGCCACGGCACCAT...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680014.1
CDS-3UTR TCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGTCAAATCATCTAAGGTaGCTGGCCCAGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRSNHLR*LAQGQE
Trigger: CTCCTGGCCCTGGGCCAGTCACCTTAGATGATTTGA...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS-3UTR TCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCAGCCATCTGCAGCAATaGGGCGGCGCTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPSHLQQ*GGAEHL
Trigger: GAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCTCAGAGCTCTCTTaGTCCTGCTCACTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLSSELS*SCSLGP
Trigger: AGGGCCTAGTGAGCAGGATCAAGAGAGCTCTGAGGA...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGGTACCAGCGGTTGTTaGAAACTCGTGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGGTSGC*KLVGTS
Trigger: AGAAGTGCCCACGAGTTTTCAACAACCGCTGGTACC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCCAGACTCCAGGCCTaGGTTCTAGCCAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCPRLQA*VLAKQA
Trigger: AGCCTGTTTGGCTAGAACTCAGGCCTGGAGTCTGGG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTAGCATGAGCCAGGGTTaGAGGCTCCCAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCSMSQG*RLPELW
Trigger: CCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCT...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGCCACCAGGTGCCAGTaGCTCCAGGGACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQATRCQ*LQGQLH
Trigger: GTGGAGCTGTCCCTGGAGGCACTGGCACCTGGTGGC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCAAGTTGAGGATCTGCTaGAGGCCACCAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLKLRIC*RPPGAS
Trigger: ACTGGCACCTGGTGGCCTGCAGCAGATCCTCAACTT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGATGAAGTTGAGGATCTaGTGCAGGCCACCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVMKLRI*CRPPGA
Trigger: GGCACCTGGTGGCCTGCAGCAGATCCTCAACTTCAT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGGCCAGGGCCACAGTaGCCGGACCTGGTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKGPGPQ*PDLVGL
Trigger: TAGGCCCACCAGGTCCGGGCACTGTGGCCCTGGCCC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGCCCTGCGGCTGTAGGTaGCAGAACCCCCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVPCGCR*QNPQAL
Trigger: AAGAGCTTGGGGGTTCTGGCACCTACAGCCGCAGGG...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGGCCCCGTGGACACGTaGAGTGTCTGGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLGPVDT*SVWLLR
Trigger: CCTCAACAACCAGACACTGCACGTGTCCACGGGGCC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTGGCATGGATGGTGCTaGTTCTCCTCCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVWHGWC*FSSSFT
Trigger: GGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTGGCATGGATGGTGCTaGTTCTCCTCCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLWHGWC*FSSSFT
Trigger: GGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCA...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCAGCGGGTGCACGGGTaGAGCTCGGCAGCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPQRVHG*SSAASC
Trigger: ACAACTAGCTGCCGAGCTGCACCCGTGCACCCGCTG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCAGGACAGGGTTTCATTaGCAGCTCCCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLRTGFH*QLPTSV
Trigger: GACACTGGTGGGGAGCTGGCAATGAAACCCTGTCCT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGAGAGGGGTTGGTTGTaGCCACCTAGAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLERGWL*PPRAPV
Trigger: CACGGGAGCTCTAGGTGGGCACAACCAACCCCTCTC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGTGGGCATGGCCATTCTaGCACTACCAAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTWAWPF*HYQALC
Trigger: ACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCA...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCACGATGATCTGGGATTaGTCCCTGCGGCGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLTMIWD*SLRRVR
Trigger: CCTTACTCGCCGCAGGGAGCAATCCCAGATCATCGT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGGCGTCCAGCAGCTCTTaGCAGGACGCAGCGATGTCA +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEASSSS*QDAAMS
Trigger: TGACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGC...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGAAAGAAGGGCTGGGCTaGCCCAATGGTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEKEGLG*PNGGRH
Trigger: GTGCCTGCCACCATTGGGCCAGCCCAGCCCTTCTTT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGACACGTGCAGTGTCTaGTTGTTGAGGTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLDTCSV*LLRFTS
Trigger: GGAGGTGAACCTCAACAACCAGACACTGCACGTGTC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCGACACGTGCAGTGTCTaGTTGTTGAGGTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGDTCSV*LLRFTS
Trigger: GGAGGTGAACCTCAACAACCAGACACTGCACGTGTC...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCTCCCCTCTGGCCCCGTaGACACGTGCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPSPLAP*TRAVSG
Trigger: ACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGA...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGCACTTCTGGCATGGATaGTGCTGCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLHFWHG*CCFSSS
Trigger: GCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTG...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACTTCTGGCATGGATaGTGCTGCTTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVHFWHG*CCFSSS
Trigger: GCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGACTCGTGGGCACTTCTaGCATGGATGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVTRGHF*HGWCCF
Trigger: GAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGGCATGTCCTTGGTGTaGGCAACCATGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSGMSLV*ATMCLR
Trigger: GCGTAAGCACATGGTTGCCCACACCAAGGACATGCC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCACTGGCCAACCCCTCTaGCACAGGCCTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPTGQPL*HRPWQR
Trigger: CCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCAGT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGAGGACTCAGGACCCTTaGTGCCACCTGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMERTQDP*CHLVQV
Trigger: GACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGAGGCACAGCAGCTTCTaGGGACATCTCCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSRHSSF*GHLQDS
Trigger: TGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCT...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCCACACTTGTTCCTTCTaGTGTGGGATATATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPHTCSF*CGIYGQ
Trigger: CTGGCCATATATCCCACACCAGAAGGAACAAGTGTG...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGAGGCTCCCAGAACTGTaGCCACAGGGCTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRRLPEL*PQGLSS
Trigger: TGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCT...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGGTCTCAACACACACCTaGGCATGGCCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRVSTHT*AWPFCH
Trigger: GTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGAC...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp GAGCAGCCGCCCTGCCCCTGCCCCACTAATAGCACCTaGAAACCCTACCAGCACTGCCCAAGCCTCATCCTA +
Preference number: 4 (lower is better)
Translates to: EQPPCPCPTNST*KPYQHCPSLIL
Trigger: TAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
3UTR CAA 72 bp AGGGCACCGTGGAGACTATGGCAGCATGAGCCAGGGTaGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RAPWRLWQHEPG*KAPRTVATGLE
Trigger: CTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGTGTCGGCCTCCTGCTTaGTGTCACAGTAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMECRPPA*CHSSRA
Trigger: CGCCCTACTACTGTGACATCAAGCAGGAGGCCGACA...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGGGTACCAGCGGTTGTTaGAAACTCGTGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVGTSGC*KLVGTS
Trigger: AGAAGTGCCCACGAGTTTTCAACAACCGCTGGTACC...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCGCACCATTGGCACATaGACTGCTTGTGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTRTIGT*TACGQC
Trigger: ACATTGGCCACAAGCAGTTCATGTGCCAATGGTGCG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCCCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGACAGCAGGAGCGCCTaGGCGTACGTCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQDSRSA*AYVYSS
Trigger: GGAGCTGTAGACGTACGCTCAGGCGCTCCTGCTGTC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCAACAATGGCCCAAGTaGAGAGAGTGCTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLQQWPK*RECLAP
Trigger: TGGTGCTAAGCACTCTCTTCACTTGGGCCATTGTTG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGGAGACTATGGCAGCATaGGCCAGGGTTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVETMAA*ARVEGS
Trigger: GGAGCCTTCAACCCTGGCTCATGCTGCCATAGTCTC...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGCTACCAAGCCCTCTGTaGAGGGCACCGTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVLPSPL*RAPWRL
Trigger: TAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAG...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGACAGCTCCACACGCTaGAGCTGCTTGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLDSSTR*SCLFWV
Trigger: CACCCAGAACAAGCAGCTGCAGCGTGTGGAGCTGTC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCGCCACCAGGTGCCAGTaGCTCCAGGGACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPATRCQ*LQGQLH
Trigger: GTGGAGCTGTCCCTGGAGGCACTGGCACCTGGTGGC...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTCGTCCGAGTGTCTCTaGAGCCCGTCCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSSECL*SPSSRP
Trigger: GGGCCGGGAGGACGGGCTGCAGAGACACTCGGACGA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGTTCTGGCATGGATGGTaGTGCTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRFWHGW*CFSSSF
Trigger: GAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAA...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGCACTGGTCGCAGATCTaGATGCGGCTGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVHWSQI*MRLWVT
Trigger: TGTGACCCACAGCCGCATGCAGATCTGCGACCAGTG...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGTGTGGCCAATGTGGATaGTCATGTGTGACCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PACPTPHSEALVCSLRTSCGQCG*SCVTAA
Trigger: AGCTGCGGTCACACATGAGCATCCACATTGGCCACA...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGAAACCCTACCAGCACTaGCCAAGCCTCATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLKPYQH*PSLILG
Trigger: TCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTT...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGGTGGGGGTTTAAGGTaGAAAGAGTATAACAAACAA +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRGGGLR*KEYNKQ
Trigger: TTGTTTGTTATACTCTTTGCACCTTAAACCCCCACC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCATTGGGCAAGGAAGCTaGTGGCACTGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLIGQGS*WHCTLQ
Trigger: TTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAAT...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGATTGGGCAAGGAAGCTaGTGGCACTGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVIGQGS*WHCTLQ
Trigger: TTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAAT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCCAGCTCCAAAGAGCTaGCAGGCACTGGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEPAPKS*QALGLE
Trigger: CTCTAGTCCCAGTGCCTGGCAGCTCTTTGGAGCTGG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCTGGGCATGGCCATTCTaGCACTACCAAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGWAWPF*HYQALC
Trigger: ACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCA...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTCAGCTGGAGTGCAGCTaGCAGCCGGCTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPQLECS*QPAGPG
Trigger: CCCTGGCCCAGCCGGCTGCCAGCTGCACTCCAGCTG...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCGCGGGCATAGATCTTaGGCAGGCCTGGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPRGHRS*AGLGCR
Trigger: CCGACACCCCAGGCCTGCCCAAGATCTATGCCCGCG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAATCCCCTCTGGCCCCGTaGACACGTGCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQSPLAP*TRAVSG
Trigger: ACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGA...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACACGGTGGCTGGGCTTaGCCCGGCACCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPHGGWA*PGTWLP
Trigger: GGGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCGTTGTTGAAAACTCGTaGGCACTTCTGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPAVVENS*ALLAWM
Trigger: CATCCATGCCAGAAGTGCCCACGAGTTTTCAACAAC...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCCACATGTCACACACTaGATGTTGCGCTCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRPHVTH*MLRSQS
Trigger: AGACTGCGAGCGCAACATCCAGTGTGTGACATGTGG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGATCTTGTTATGCTCATaGAGGGACCAAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLILLCS*RDQSFL
Trigger: CAAGAAGCTTTGGTCCCTCCATGAGCATAACAAGAT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCAGCTGGTACTTGTACTaGAAGCGCTCATTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPASWYLY*KRSLQF
Trigger: GAACTGCAATGAGCGCTTCCAGTACAAGTACCAGCT...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCACACAGTGAAGCACTaGTCTGCAGTCTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCHTVKH*SAVSAP
Trigger: AGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCAGGACTCAGGACCCTTaGTGCCACCTGGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPRTQDP*CHLVQV
Trigger: GACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCTTAGTGCTAGCCTCATaGGGGCAAGCAATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLLVLAS*GQAIGS
Trigger: AGACCCAATTGCTTGCCCCCATGAGGCTAGCACTAA...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGAAACATGTAGCTTATaGAACCTTCCTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRETCSL*NLPPHI
Trigger: AATATGGGGAGGAAGGTTCCATAAGCTACATGTTTC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGGCCAGTGATGGGGGTTaGAAACCCATGGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVASDGG*KPMEDP
Trigger: AGGGTCCTCCATGGGTTTCCAACCCCCATCACTGGC...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTAGGCTCCCAGAACTGTaGCCACAGGGCTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCRLPEL*PQGLSS
Trigger: TGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCT...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCTCACAGATCTCGCATaGGAACTTCTTCTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: APKAGAASQPVCPRRVWLLTDLA*ELLLCV
Trigger: TACGCAGAGAAGAAGTTCTCATGCGAGATCTGTGAG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCACTAATAGCACCTTaGAACCCTACCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCPLIAP*NPTSTA
Trigger: GGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCTTGGGGTGGGGGTCCTaGCCAGAAGCCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFILGWGS*PEAFFL
Trigger: GAGGAAGAAGGCTTCTGGTCAGGACCCCCACCCCAA...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGTGCCGGAAAGACGCTaGGCTGGGGCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKVPERR*AGAPAP
Trigger: TGGTGCTGGTGCCCCAGCGCAGCGTCTTTCCGGCAC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCCTCTTCTCCCTGACTaGCACCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPPLLPD*HPLPPP
Trigger: AGGAGGAGGAAGAGGGTGGCAGTCAGGGAGAAGAGG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGGGGGGTCTGCCCGGCTaGTTCGGCTTCCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLGGLPG*FGFPVA
Trigger: GGCCACGGGGAAGCCGAAGCAGCCGGGCAGACCCCC...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCTGCACAATCTTGTTATaGTCATGGAGGGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPACIPLLVGASGRVHPACTILL*SWRDQS
Trigger: GCTTTGGTCCCTCCATGAGCATAACAAGATTGTGCA...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGAGTGCTGCAGTGAGTaGACCTTGAGGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLECCSE*TLRDML
Trigger: CAGCATGTCCCTCAAGGTGCACTCACTGCAGCACTC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCTCATCCTAGGACTCTaGCCCCAAAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPLILGL*PQSWCC
Trigger: GCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAAACCCTACCAGCACTaGCCAAGCCTCATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGKPYQH*PSLILG
Trigger: TCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGAGTGTCTCTGACCTCTaGTTGTCAGTATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLSVSDL*LSVWPD
Trigger: GTCAGGCCATACTGACAAGCAGAGGTCAGAGACACT...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCTGAGGTGCCATTATTaGTTCTGGCCTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVLRCHY*FWPCGL
Trigger: CAGACCACAAGGCCAGAAGCAATAATGGCACCTCAG...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGTCCTTAAAGAAGGGCTaGGCTGGCCCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMESLKKG*AGPMVA
Trigger: TGCCACCATTGGGCCAGCCCAGCCCTTCTTTAAGGA...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCAGCTTGCACAAGCTaGCTGGGGGCCCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPACTS*LGAHRP
Trigger: AGGCCGGTGGGCCCCCAGCCAGCTTGTGCAAGCTGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCCTCCAGCTTCACCTTaGCCCCCAGCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPPPASP*PPAHQW
Trigger: CCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGACTCGTGGGCACTTCTaGCATGGATGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVPVGDPGASDGGWKPMETRGHF*HGWCCF
Trigger: GAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACATCTTGTTATGCTCATaGAGGGACCAAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDILLCS*RDQSFL
Trigger: CAAGAAGCTTTGGTCCCTCCATGAGCATAACAAGAT...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTACGCACGTGGGCCATaGTGTAGAACTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVYARGP*CRTSSH
Trigger: GTGAGAAGAAGTTCTACACCATGGCCCACGTGCGTA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCGCCGGGGCTGGCAGTaGTGGGGAAGAGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDRRGWQ*WGRAEA
Trigger: CGCCTCCGCTCTTCCCCACCACTGCCAGCCCCGGCG...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGACTGGCCAACCCCTCTaGCACAGGCCTTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKETGQPL*HRPWQR
Trigger: CCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCAGT...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGTTAGTGCTAGCCTCATaGGGGCAAGCAATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTLVLAS*GQAIGS
Trigger: AGACCCAATTGCTTGCCCCCATGAGGCTAGCACTAA...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCAGTAAAGCAGGAGCCTaGAGTCCCCAGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPSKAGA*SPQPWG
Trigger: ACCCCAAGGCTGGGGACTCCAGGCTCCTGCTTTACT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTTGCCATTATTGCTTCTaGCCTTGTGGTCTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: YGLTGLSLATATQAYSGCCHYCF*PCGLAG
Trigger: TCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCA...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCTGTGCCCCATGCTCTaGGGCTGTGGGGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPLCPML*GCGVPV
Trigger: TACAGGCACCCCACAGCCCCAGAGCATGGGGCACAG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGGGACATGCTGCGCTTaGAGGACTTTCCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQGTCCA*RTFRRS
Trigger: AGACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCCAAACCCTCCAAGATaGGGAAGCAAATTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGPNPPR*GSKLGA
Trigger: TGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTGG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCCATACTGGAACTGCTaGGGTGCCATTATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTPYWNC*GAIIAS
Trigger: AGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGCCACCAGCAGTCCCTaGCCCGTCCTCAACACGCAC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPATSSP*PVLNTH
Trigger: GTGCGTGTTGAGGACGGGGCAGGGACTGCTGGTGGC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGGTCGCAGATCTGCATaGGGCTGTGGGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPGRRSA*GCGSHS
Trigger: TGAATGTGACCCACAGCCGCATGCAGATCTGCGACC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCGCTCGCAGTCTGTCTaGCTGTGCAGCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGRSQSV*LCSSSS
Trigger: CGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCG...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGTGTGGGCAACCATGTaGTTACGCACGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQVWATM*LRTWAM
Trigger: CATGGCCCACGTGCGTAAGCACATGGTTGCCCACAC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGGCCCTGCCTCAGTaGTTGCGGCTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGQALPQ*LRLSDW
Trigger: CCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGCCTG...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAAGGGATCCCTGGGCCTaGTGGCAGCAGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPRDPWA*WQQSGW
Trigger: CCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGCCGCCCTGCCCCTaGCCCACTAATAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGQPPCP*PTNSTL
Trigger: CAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTG...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAATGTGAGCAGCCGCCCTaGCCCTGCCCCACTAATAGC +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKCEQPP*PCPTNS
Trigger: GCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACA...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCTTCCCACTCCAGCCATaGTGGGAAGGCAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLFPLQP*WEGNSV
Trigger: GACACTATTGCCTTCCCAGCATGGCTGGAGTGGGAA...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCTTGCACAAGCTGGCTaGGGGCCCACCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSLAQAG*GPTGLL
Trigger: GAGGAGGCCGGTGGGCCCCCAGCCAGCTTGTGCAAG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCAGCCCATCAGTGGCTaGCGGCCCTCGGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLQPISG*RPSGRC
Trigger: GCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGGTTGTTGAAAACTCGTaGGCACTTCTGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTVVENS*ALLAWM
Trigger: CATCCATGCCAGAAGTGCCCACGAGTTTTCAACAAC...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGATCTGCATGCGGCTGTaGGTCACATTCATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVICMRL*VTFMCF
Trigger: GAAACACATGAATGTGACCCACAGCCGCATGCAGAT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCTACGCACGTGGGCCATaGTGTAGAACTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGYARGP*CRTSSH
Trigger: GTGAGAAGAAGTTCTACACCATGGCCCACGTGCGTA...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATCGCCGGCCAGGGTGTaGCTGACGCGGAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSPARV*LTRKHF
Trigger: GAAGTGCTTCCGCGTCAGCCACACCCTGGCCGGCGA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTCCCCGGGAAGGCAGTaGGTCCCTCCTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSPGRQ*VPPGVG
Trigger: GCCCACTCCAGGAGGGACCCACTGCCTTCCCGGGGA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGACCCAGGCTCCAACTaGCCAACCCCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKDPGSN*PTPLAQ
Trigger: CTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGACCCTTGGTGCCACCTaGTGCAGGTCAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKETLGAT*CRSGIP
Trigger: AGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGT...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CTTGCGGCTCTCAGACTGGGTCTACACCTCCTCAGGGGTTGTGGGGGTGGCACGCACACTTGTTCCTTCTaGTGTGGGATATATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAALRLGLHLLRGCGGGTHTCSF*CGIYGQ
Trigger: CTGGCCATATATCCCACACCAGAAGGAACAAGTGTG...CGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGCCTAGAGCGGGCCTTTaGGGGAGCAGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEPRAGL*GSRDGH
Trigger: GTGTCCATCTCTGCTCCCCCAAAGGCCCGCTCTAGG...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAATAGTGTCGGGGAGTaGTGGGGGTTTAAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGNSVGE*WGFKVQ
Trigger: TTGCACCTTAAACCCCCACCACTCCCCGACACTATT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAACCACTCCAGCCATGCTaGGAAGGCAATAGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQPLQPC*EGNSVG
Trigger: CCCGACACTATTGCCTTCCCAGCATGGCTGGAGTGG...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCCACTCCAGCCATGCTaGGAAGGCAATAGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIPLQPC*EGNSVG
Trigger: CCCGACACTATTGCCTTCCCAGCATGGCTGGAGTGG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAGCTCCAACATCAATTaGGCAAGGAAGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGSSNIN*ARKLLA
Trigger: TGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGCACCGTGGAGACTATaGCAGCATGAGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQAPWRL*QHEPGL
Trigger: CAACCCTGGCTCATGCTGCCATAGTCTCCACGGTGC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGGTTCTGGGTGAAGAGTaGGTGGAAGAACTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVVLGEE*VEELAV
Trigger: TACAGCCAGTTCTTCCACTCACTCTTCACCCAGAAC...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCCTCACAGATCTCGCATaGGAACTTCTTCTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGLTDLA*ELLLCV
Trigger: TACGCAGAGAAGAAGTTCTCATGCGAGATCTGTGAG...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGGGGACATGCTGCGCTTaGAGGACTTTCCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEGTCCA*RTFRRS
Trigger: AGACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCC...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAATCCCCCGAGGGGCCTaGACATGCAGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKIPRGA*TCRLLY
Trigger: GTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGAT...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCTACCAAGCCCTCTGTaGAGGGCACCGTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPLPSPL*RAPWRL
Trigger: TAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGGTGCCGGAAAGACGCTaGGCTGGGGCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSVPERR*AGAPAP
Trigger: TGGTGCTGGTGCCCCAGCGCAGCGTCTTTCCGGCAC...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACCAGCAGGAAGCGCTTaGCGCACTGGTCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKPAGSA*RTGRRS
Trigger: AGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGAGTGCTGCAGTGAGTaGACCTTGAGGGACATGCTG +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIECCSE*TLRDML
Trigger: CAGCATGTCCCTCAAGGTGCACTCACTGCAGCACTC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTCCAGTCTCAGGCCCTaGCTCAGTGCTTGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSSLRP*LSACGS
Trigger: AGAGCCGCAAGCACTGAGGCAGGGCCTGAGACTGGA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGGTGAGGAACTGGGGTaGTCTGTGAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPGEELG*SVSSRP
Trigger: AGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACTCCTTTACCGGCAGTaGTATGGGCGCCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPLLYRQ*YGRPTH
Trigger: GTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCAGAACCACGGTGGCTaGGCTTGGCCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDQNHGG*AWPGTW
Trigger: CCAGGTGCCGGGCCAAGCCCAGCCACCGTGGTTCTG...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATCTCCCGGGACCGTGTaGCCATGTGACTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSPGTV*PCDCGE
Trigger: CTCCCCACAGTCACATGGCCACACGGTCCCGGGAGA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTCCTCCAGCTTCACCTTaGCCCCCAGCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPPPASP*PPAHQW
Trigger: CCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGG...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTCGGCAGCTAGTTGTTaGCGTTCATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSAASC*RSSSRR
Trigger: CCGGCGGGAGGATGAACGCCAACAACTAGCTGCCGA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCCTTGGCAGAGGGACTaGCCACACCTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSPWQRD*PHLLPR
Trigger: CCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACTCTGGCACAGGCCTTaGCAGAGGGACTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPLWHRP*QRDWPH
Trigger: GTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCCAGAG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCAGGGTGGTGTGGCTTaGATTATAAATCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLQGGVA*IINPQI
Trigger: GATCTGAGGATTTATAATCCAAGCCACACCACCCTG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATGGCTCCTATCCCCAGTaGGGCAGGGGCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDGSYPQ*GRGLPG
Trigger: TCCTGGGAGGCCCCTGCCCCACTGGGGATAGGAGCC...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCACACACACCTGGGCATaGCCATTCTGCCACTACCAA +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPTHTWA*PFCHYQ
Trigger: TTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGT...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp GAGCGCCTGAGCGTACGTCTACAGCTCCAACATCAATaGGGCAAGGAAGCTGCTGGCACTGTACCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ERLSVRLQLQHQ*GKEAAGTVPSK
Trigger: CTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTACGCTCAGGCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTGTCGGCCTCCTGCTTaGTGTCACAGTAGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGCRPPA*CHSSRA
Trigger: CGCCCTACTACTGTGACATCAAGCAGGAGGCCGACA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGGCCAGAGTAGCTGGTaGGGAACTGGGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPGQSSW*GTGVLC
Trigger: ACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCTCCTTGGGAGGGGATaGTCCTGCGTCCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDLLGRG*SCVPLP
Trigger: GGGAAGGGGGACGCAGGATCATCCCCTCCCAAGGAG...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCAGCAGGAAGCGCTTaGCGCACTGGTCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPAGSA*RTGRRS
Trigger: AGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACAGTCTGTCTGCCTGTaGAGCAGCAGCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPQSVCL*SSSSLS
Trigger: GGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGCTTCTCCCCTGAGTaGTGCAGTGAGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKGFSPE*CSECTL
Trigger: CAAGGTGCACTCACTGCAGCACTCAGGGGAGAAGCC...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCGGCTTCTCCCCTGAGTaGTGCAGTGAGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGGFSPE*CSECTL
Trigger: CAAGGTGCACTCACTGCAGCACTCAGGGGAGAAGCC...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAAGTGAAGCACTGGTCTaGAGTCTCCGCACCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKSEALV*SLRTSP
Trigger: TGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACT...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATAGGGATCCCTGGGCCTaGTGGCAGCAGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDRDPWA*WQQSGW
Trigger: CCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCT...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAATCCTCTCACTCGCATaGCTGCTGTGCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKILSLA*LLCPML
Trigger: GAGCATGGGGCACAGCAGGCATGCGAGTGAGAGGAT...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGTTGTTGAAAACTCGTaGGCACTTCTGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLVVENS*ALLAWM
Trigger: CATCCATGCCAGAAGTGCCCACGAGTTTTCAACAAC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCATCTGCATGCGGCTGTaGGTCACATTCATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLICMRL*VTFMCF
Trigger: GAAACACATGAATGTGACCCACAGCCGCATGCAGAT...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGGGCATGTCCTTGGTGTaGGCAACCATGTGCTTACGC +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEGMSLV*ATMCLR
Trigger: GCGTAAGCACATGGTTGCCCACACCAAGGACATGCC...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATCGGCAGCTAGTTGTTaGCGTTCATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSAASC*RSSSRR
Trigger: CCGGCGGGAGGATGAACGCCAACAACTAGCTGCCGA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCAGGTCAGGGATCCCTaGGCCTGCTGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSQVRDP*ACWQQS
Trigger: ACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACCTG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGATCACTCGGGCACCTTaGGCCTGCCCAAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEITRAP*ACPNLY
Trigger: GTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGAT...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTGGGCAAGGAAGCTGCTaGCACTGTACCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPGQGSC*HCTLQA
Trigger: GGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCC...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCGTCTGGTCAGCTGTCTaGACCCCTCACCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGVWSAV*TPHLIP
Trigger: TGGGATCAGGTGAGGGGTCCAGACAGCTGACCAGAC...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCTTGCTTCTGGCCTTGTaGTCTGGCCGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGLLLAL*SGRKGA
Trigger: GGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAA...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACCCCACAGATCTCCTTaGGAGGGGATGATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKPHRSP*EGMILR
Trigger: ACGCAGGATCATCCCCTCCCAAGGAGATCTGTGGGG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCAGTCCAGATGGACGGTaGGACCCCCACAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSPDGR*DPHRSP
Trigger: AGGAGATCTGTGGGGGTCCCACCGTCCATCTGGACT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTGCTGAGAAGTCCAGATaGACGGTGGGACCCCCACAG +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPAEKSR*TVGPPQ
Trigger: CTGTGGGGGTCCCACCGTCCATCTGGACTTCTCAGC...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACATGCTCTGGGGCTGTaGGGTGCCTGTACACGAGCA +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPHALGL*GACTRA
Trigger: TGCTCGTGTACAGGCACCCCACAGCCCCAGAGCATG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTaGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAAT +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLA*WSGRKGAPTNN
Trigger: ATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp ACCCCTATCCATACTGGAACTGCTGAGGTGCCATTATaGCTTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPIHTGTAEVPL*LLALWSGRKGA
Trigger: GGCTCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGCTGCTTGTTCTGGGTaGAGAGTGAGTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIAACSG*RVSGRT
Trigger: AGTTCTTCCACTCACTCTTCACCCAGAACAAGCAGC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCTCACAGATCTCGCATaGGAACTTCTTCTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPLTDLA*ELLLCV
Trigger: TACGCAGAGAAGAAGTTCTCATGCGAGATCTGTGAG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCCAAACCCTCCAAGATaGGGAAGCAAATTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIPNPPR*GSKLGA
Trigger: TGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTGG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTCCCCACTCCACACAGTaGAGCACTGGTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPPHSTQ*STGLQS
Trigger: AGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGG...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGGGCCAGAGTAGCTGGTaGGGAACTGGGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSGQSSW*GTGVLC
Trigger: ACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATCTGGACCCCTCACCTaGTCCCAGAGGGGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSGPLT*SQRGSV
Trigger: TACACTTCCCCTCTGGGATCAGGTGAGGGGTCCAGA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCCATACTGGAACTGCTaGGGTGCCATTATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPPYWNC*GAIIAS
Trigger: AGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCCCAGCCCTGGAAAGTaGGTATGGTGCCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSPSPGK*VWCPSR
Trigger: GCGACTAGGGCACCATACTCACTTTCCAGGGCTGGG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCCCTGCGGCTGTAGGTaGCAGAACCCCCAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSPCGCR*QNPQAL
Trigger: AAGAGCTTGGGGGTTCTGGCACCTACAGCCGCAGGG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCCCTGCCTCAGTGCTTaGGGCTCTCAGACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSPCLSA*GSQTGS
Trigger: AGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTAGTGAAGCACTGGTCTaGAGTCTCCGCACCTCGCCA +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPSEALV*SLRTSP
Trigger: TGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACT...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGAGCTCCCTGCCCCAGTaGCATGGGCCTCATAAGGTC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSSLPQ*HGPHKV
Trigger: GACCTTATGAGGCCCATGGCACTGGGGCAGGGAGCT...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCACTCGTGGGCACTTCTaGCATGGATGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGTRGHF*HGWCCF
Trigger: GAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCCACATGTCACACACTaGATGTTGCGCTCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPPHVTH*MLRSQS
Trigger: AGACTGCGAGCGCAACATCCAGTGTGTGACATGTGG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCCTCCTCAGGGGTTGTaGGGGTGGCACGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLPPQGL*GWHANF
Trigger: GAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACACACAGTGAAGCACTaGTCTGCAGTCTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKHTVKH*SAVSAP
Trigger: AGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCAGGCACAGCAGCTTCTaGGGACATCTCCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGRHSSF*GHLQDS
Trigger: TGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATTCTGGCCTTGTGGTCTaGCCGGAAAGGAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDSGLVV*PERSPH
Trigger: GTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGA...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAAGTCCAGATGGACGGTaGGACCCCCACAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSPDGR*DPHRSP
Trigger: AGGAGATCTGTGGGGGTCCCACCGTCCATCTGGACT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCACACACACCTGGGCATaGCCATTCTGCCACTACCAA +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPTHTWA*PFCHYQ
Trigger: TTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGT...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp CCCTCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGATCACTCGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PSKPREQPGWCG*DYKSSDHSGTL
Trigger: CAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATTTGGGGTGGGGGTCCTaGCCAGAAGCCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDLGWGS*PEAFFL
Trigger: GAGGAAGAAGGCTTCTGGTCAGGACCCCCACCCCAA...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATGCGATGTCAGCCATCTaGAGCAATGAGGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDAMSAI*SNEAAL
Trigger: CAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGC...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCCTCCTCCCGTCCACTaGCACCACCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLPPPVH*HHLPLP
Trigger: AGGAAGAGGAAGGTGGTGGCAGTGGACGGGAGGAGG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGGTCGCAGATCTGCATaGGGCTGTGGGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPGRRSA*GCGSHS
Trigger: TGAATGTGACCCACAGCCGCATGCAGATCTGCGACC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTGGTCGCAGATCTGCATaGGGCTGTGGGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: YVYSSNINWARKLLALYPGRRSA*GCGSHS
Trigger: TGAATGTGACCCACAGCCGCATGCAGATCTGCGACC...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATCACACACTGGATGTTaGGCTCGCAGTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPSHTGC*ARSLSA
Trigger: GGCAGACAGACTGCGAGCGCAACATCCAGTGTGTGA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGCTCATCCTAGGACTCTaGCCCCAAAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSLILGL*PQSWCC
Trigger: GCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAG...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATAAGCGCTTGCCGCACTaGTCGCAGATCTGCATGCGG +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDKRLPH*SQICMR
Trigger: CCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTT...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATAGGGTCCCTCCTGGAGTaGGCCCTGACTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIGSLLE*ALTPGP
Trigger: GGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCC...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGTCTCAACACACACCTaGGCATGGCCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPVSTHT*AWPFCH
Trigger: GTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGAC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACCACTAATAGCACCTTaGAACCCTACCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPPLIAP*NPTSTA
Trigger: GGCAGTGCTGGTAGGGTTTCAAGGTGCTATTAGTGG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCACTAGTCGCCTCATTCTaGCATCTGGGGGCACATTGT +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPLVASF*HLGAHC
Trigger: ACAATGTGCCCCCAGATGTCAGAATGAGGCGACTAG...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGGACAGCTCCACACGCTaGAGCTGCTTGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLDSSTR*SCLFWV
Trigger: CACCCAGAACAAGCAGCTGCAGCGTGTGGAGCTGTC...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCTGCACAATCTTGTTATaGTCATGGAGGGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: HEPGLKAPRTVATGLEFICTILL*SWRDQS
Trigger: GCTTTGGTCCCTCCATGAGCATAACAAGATTGTGCA...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAAAACCCTACCAGCACTaGCCAAGCCTCATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPKPYQH*PSLILG
Trigger: TCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAAAGTGTCTCTGACCTCTaGTTGTCAGTATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKSVSDL*LSVWPD
Trigger: GTCAGGCCATACTGACAAGCAGAGGTCAGAGACACT...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTCCTTAAAGAAGGGCTaGGCTGGCCCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSLKKG*AGPMVA
Trigger: TGCCACCATTGGGCCAGCCCAGCCCTTCTTTAAGGA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACCAGCTTGCACAAGCTaGCTGGGGGCCCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIPACTS*LGAHRP
Trigger: AGGCCGGTGGGCCCCCAGCCAGCTTGTGCAAGCTGG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGACACGTGCAGTGTCTaGTTGTTGAGGTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPDTCSV*LLRFTS
Trigger: GGAGGTGAACCTCAACAACCAGACACTGCACGTGTC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGAGCTGGTACTTGTACTaGAAGCGCTCATTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKESWYLY*KRSLQF
Trigger: GAACTGCAATGAGCGCTTCCAGTACAAGTACCAGCT...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCCACACTTGTTCCTTCTaGTGTGGGATATATGGCCAG +
Preference number: 4 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPHTCSF*CGIYGQ
Trigger: CTGGCCATATATCCCACACCAGAAGGAACAAGTGTG...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCAGCTCCAACATCAATTaGGCAAGGAAGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSSNIN*ARKLLA
Trigger: TGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCCCCACAGATCTCCTTaGGAGGGGATGATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDPHRSP*EGMILR
Trigger: ACGCAGGATCATCCCCTCCCAAGGAGATCTGTGGGG...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCACGAGCAGTTGTCAATaGTCTCAACACACACCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGTSSCQ*SQHTPG
Trigger: CCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACGGCCAGGGTGTGGCTaGCGCGGAAGCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIRPGCG*RGSTSP
Trigger: AGGAGAAGTGCTTCCGCGTCAGCCACACCCTGGCCG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGTGGCATGGATGGTGCTaGTTCTCCTCCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLWHGWC*FSSSFT
Trigger: GGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCA...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCGGTGGGGGTTTAAGGTaGAAAGAGTATAACAAACAA +
Preference number: 4 (lower is better)
Translates to: STLKPYQHCPSLILGLCPGGGLR*KEYNKQ
Trigger: TTGTTTGTTATACTCTTTGCACCTTAAACCCCCACC...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGAGGACAGGGTTTCATTaGCAGCTCCCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLRTGFH*QLPTSV
Trigger: GACACTGGTGGGGAGCTGGCAATGAAACCCTGTCCT...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAATCTTGTTATGCTCATaGAGGGACCAAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQILLCS*RDQSFL
Trigger: CAAGAAGCTTTGGTCCCTCCATGAGCATAACAAGAT...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATATTACCGGCAGTGCTATaGGCGCCCCACCCACCGGTG +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGILPAVL*APHPPV
Trigger: CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGAGTGTCGGGGAGTGGTaGGGGTTTAAGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSVGEW*GFKVQR
Trigger: TCTTTGCACCTTAAACCCCCACCACTCCCCGACACT...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAACGAGCAGTTGTCAATaGTCTCAACACACACCTGGG +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPTSSCQ*SQHTPG
Trigger: CCCAGGTGTGTGTTGAGACCATTGACAACTGCTCGT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGGGTACCAGCGGTTGTTaGAAACTCGTGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLGTSGC*KLVGTS
Trigger: AGAAGTGCCCACGAGTTTTCAACAACCGCTGGTACC...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR TCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGCGCACCATTGGCACATaGACTGCTTGTGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLRTIGT*TACGQC
Trigger: ACATTGGCCACAAGCAGTTCATGTGCCAATGGTGCG...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGTGTGGCCAATGTGGATaGTCATGTGTGACCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLCGQCG*SCVTAA
Trigger: AGCTGCGGTCACACATGAGCATCCACATTGGCCACA...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCGGGCACCTTGGGCCTaGCCAAATCTGTACAGAATA +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDRAPWA*PNLYRI
Trigger: TATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCG...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAATCTGCATGCGGCTGTaGGTCACATTCATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPICMRL*VTFMCF
Trigger: GAAACACATGAATGTGACCCACAGCCGCATGCAGAT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR TCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGGCTGCTTGTTCTGGGTaGAGAGTGAGTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLAACSG*RVSGRT
Trigger: AGTTCTTCCACTCACTCTTCACCCAGAACAAGCAGC...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCCAAGCCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATTACGCACGTGGGCCATaGTGTAGAACTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SKPREQPGWCGLDYKSSDYARGP*CRTSSH
Trigger: GTGAGAAGAAGTTCTACACCATGGCCCACGTGCGTA...ATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGGAAACATGTAGCTTATaGAACCTTCCTCCCCATATT +
Preference number: 4 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEETCSL*NLPPHI
Trigger: AATATGGGGAGGAAGGTTCCATAAGCTACATGTTTC...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTGCACAATCTTGTTATaGTCATGGAGGGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSCTILL*SWRDQS
Trigger: GCTTTGGTCCCTCCATGAGCATAACAAGATTGTGCA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAAGAGAACAACCAGGGTaGTGTGGCTTGGATTATAAA +
Preference number: 4 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPREQPG*CGLDYK
Trigger: TTTATAATCCAAGCCACACCACCCTGGTTGTTCTCT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
3UTR CAA 72 bp GGCTTGGATTATAAATCCTCAGATCACTCGGGCACCTaGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLDYKSSDHSGT*GLPKSVQNKVL
Trigger: AAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATAATCCAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATATTCTGGCATGGATGGTaGTGCTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIFWHGW*CFSSSF
Trigger: GAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAA...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATATTCCCACTCCAGCCATaGTGGGAAGGCAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIFPLQP*WEGNSV
Trigger: GACACTATTGCCTTCCCAGCATGGCTGGAGTGGGAA...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp TCGGGCACCTTGGGCCTGCCCAAATCTGTACAGAATAAAGTGCTTCGTTTATTGAGAGAACAACCAGGGTaGTGTGGCTTGGATTATAAA +
Preference number: 4 (lower is better)
Translates to: SGTLGLPKSVQNKVLRLLREQPG*CGLDYK
Trigger: TTTATAATCCAAGCCACACCACCCTGGTTGTTCTCT...CAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR GCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACTGAGGTGCCATTATTaGTTCTGGCCTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGILRCHY*FWPCGL
Trigger: CAGACCACAAGGCCAGAAGCAATAATGGCACCTCAG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CCA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACAGGGTGGTGTGGCTTaGATTATAAATCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIQGGVA*IINPQI
Trigger: GATCTGAGGATTTATAATCCAAGCCACACCACCCTG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp GCGCAGCTGGAGTGCAGCTGGCAGCCGGCTGGGCCAGGGCCACAGTaGCCGGACCTGGTGGGCCTAGAGAGCGGGCGTCCAGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: AQLECSWQPAGPGPQ*PDLVGLESGRPAAL
Trigger: AAGAGCTGCTGGACGCCCGCTCTCTAGGCCCACCAGGTCCGGGCACTGTGGCCCTGGCCCAGCCGGCTGCCAGCTGCACTCCAGCTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCCACGGTGGCTGGGCTaGGCCCGGCACCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LPACIPLLVGASGRVHPAPRWLG*ARHLAS
Trigger: GGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTGG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 5 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CCA 90 bp AGTGGCTGGCGGCCCTCGGGCCGATGCAGAGGCCACTCCAGGGGGTaGCTTTGGCCTCTTCCCACCCCGCCGCCCAGCTTCTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SGWRPSGRCRGHSRG*LWPLPTPPPSFFRF
Trigger: GAACCTGAAGAAGCTGGGCGGCGGGGTGGGAAGAGGCCAAAGCCACCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCGCCAGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp GGTGCTGCTTCTCCTCCAGCTTCACCTTGGCCCCCAGCCCATCAGTaGCTGGCGGCCCTCGGGCCGATGCAGAGGCCACTCCAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GAASPPASPWPPAHQ*LAALGPMQRPLQGV
Trigger: CACCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp CTGGGCTGGCCCAATGGTGGCAGGCACTGTGCCACCAGCAGTCCCTaGCCCGTCCTCAACACGCACCGAGTAAGGGTCAGGGCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: LGWPNGGRHCATSSP*PVLNTHRVRVRALA
Trigger: CGCGAGGGCCCTGACCCTTACTCGGTGCGTGTTGAGGACGGGGCAGGGACTGCTGGTGGCACAGTGCCTGCCACCATTGGGCCAGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp CTGCTTCTCCTCCAGCTTCACCTTGGCCCCCAGCCCATCAGTGGCTaGCGGCCCTCGGGCCGATGCAGAGGCCACTCCAGGGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LLLLQLHLGPQPISG*RPSGRCRGHSRGWL
Trigger: AAGCCACCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACAGCACCTCGTGGACGTaGGCCGCGTTGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDSTSWT*AALTSS
Trigger: GCTGCTGGTCAACGCGGCCAACGTCCACGAGGTGCT...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCCCACGGTGGCTGGGCTaGGCCCGGCACCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLPRWLG*ARHLAS
Trigger: GGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTGG...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGTCCAGCAGGAAGCGCTaGCCGCACTGGTCGCAGATC +
Preference number: 5 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLSSRKR*PHWSQI
Trigger: GATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGA...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGCTCCCGTGACCGTCTaGACCAGCTGTCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRAPVTV*TSCQAV
Trigger: GACAGCTTGACAGCTGGTCAAGACGGTCACGGGAGC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp CGGGCGTCCAGCAGCTCTTGGCAGGACGCAGCGATGTCAGCCATCTaGAGCAATGAGGCGGCGCTGAGCACCTCGTGGACGTTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RASSSSWQDAAMSAI*SNEAALSTSWTLAA
Trigger: CGCGGCCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp GTGCCCGGACCTGGTGGGCCTAGAGAGCGGGCGTCCAGCAGCTCTTaGCAGGACGCAGCGATGTCAGCCATCTGCAGCAATGAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: VPGPGGPRERASSSS*QDAAMSAICSNEAA
Trigger: CGCCGCCTCATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGCCCGCTCTCTAGGCCCACCAGGTCCGGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGGTGAAGGGCATGTCCTaGGTGTGGGCAACCATGTGC +
Preference number: 5 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRVKGMS*VWATMC
Trigger: GCACATGGTTGCCCACACCAAGGACATGCCCTTCAC...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGCACGATGATCTGGGATaGCTCCCTGCGGCGAGTAAG +
Preference number: 5 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRHDDLG*LPAASK
Trigger: CTTACTCGCCGCAGGGAGCAATCCCAGATCATCGTG...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS CCA 90 bp GGCACTTCTGGCATGGATGGTGCTGCTTCTCCTCCAGCTTCACCTTaGCCCCCAGCCCATCAGTGGCTGGCGGCCCTCGGGCCGATGCAG +
Preference number: 5 (lower is better)
Translates to: GTSGMDGAASPPASP*PPAHQWLAALGPMQ
Trigger: CTGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCGGCGTCCAGCAGCTCTaGGCAGGACGCAGCGATGTC +
Preference number: 5 (lower is better)
Translates to: APKAGAASQPVCPRRVWLGVQQL*AGRSDV
Trigger: GACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGCC...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGACGCTGAGGGACATGCTGCGCTaGAAGGACTTTCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CYGRPTHRCTGPGGTRTLRDMLR*KDFPQV
Trigger: GACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCCT...CAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCCAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LPACIPLLVGASGRVHPAQDSGP*VPPGAG
Trigger: ACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS TCA 90 bp CGCGGGCATAGATCTTGGGCAGGCCTGGGGTGTCGGCCTCCTGCTTaGTGTCACAGTAGTAGGGCGGCGCAGCTGGAGTGCAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RGHRSWAGLGCRPPA*CHSSRAAQLECSWQ
Trigger: CTGCCAGCTGCACTCCAGCTGCGCCGCCCTACTACTGTGACATCAAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATCTATGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp CGAGTAAGGGTCAGGGCCCTCGCGGGCATAGATCTTGGGCAGGCCTaGGGTGTCGGCCTCCTGCTTGATGTCACAGTAGTAGGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RVRVRALAGIDLGQA*GVGLLLDVTVVGRR
Trigger: GCGCCGCCCTACTACTGTGACATCAAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATCTATGCCCGCGAGGGCCCTGACCCTTACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp CAGAACCACGGTGGCTGGGCTTGGCCCGGCACCTGGCTTCCCCTCTaGCCCCGTGGACACGTGCAGTGTCTGGTTGTTGAGGTTCACCTC +
Preference number: 5 (lower is better)
Translates to: QNHGGWAWPGTWLPL*PRGHVQCLVVEVHL
Trigger: GAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTGGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGTGAAGGGCATGTCCTaGGTGTGGGCAACCATGTGC +
Preference number: 5 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDVKGMS*VWATMC
Trigger: GCACATGGTTGCCCACACCAAGGACATGCCCTTCAC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLALPQC*RLSDWV
Trigger: GACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGATCACTCGGGCACCTaGGGCCTGCCCAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDDHSGT*GLPKSV
Trigger: TACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATC...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS TCA 90 bp CAGCAGCTCTTGGCAGGACGCAGCGATGTCAGCCATCTGCAGCAATaGGGCGGCGCTGAGCACCTCGTGGACGTTGGCCGCGTTGACCAG +
Preference number: 5 (lower is better)
Translates to: QQLLAGRSDVSHLQQ*GGAEHLVDVGRVDQ
Trigger: CTGGTCAACGCGGCCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAAGAGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp ACCAGCACCAAGTCCACGTCGCAGAGGTCAGGCTGGAAGAGGCGCTaGTCGTTCAGGCGGCCCATCAAGCAGGCAAAGTGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: TSTKSTSQRSGWKRR*SFRRPIKQAKCSAT
Trigger: CGTGGCGCTGCACTTTGCCTGCTTGATGGGCCGCCTGAACGAGCAGCGCCTCTTCCAGCCTGACCTCTGCGACGTGGACTTGGTGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp ACTGGCTGTAGGCGGCTAGCACACCCTTGTGTGCCGGAAAGACGCTaGGCTGGGGCACCAGCACCAAGTCCACGTCGCAGAGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TGCRRLAHPCVPERR*AGAPAPSPRRRGQA
Trigger: AGCCTGACCTCTGCGACGTGGACTTGGTGCTGGTGCCCCAGCGCAGCGTCTTTCCGGCACACAAGGGTGTGCTAGCCGCCTACAGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAACCACGGTGGCTGGGCTaGGCCCGGCACCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQPRWLG*ARHLAS
Trigger: GGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTGG...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACTCCAGGTACCAGCGGTaGTTGAAAACTCGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LPAVLWAPHPPVHRPRRDSRYQR*LKTRGH
Trigger: GTGCCCACGAGTTTTCAACAACCGCTGGTACCTGGA...GTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCTGCAGTGAGTGCACCTaGAGGGACATGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LPACIPLLVGASGRVHPACSECT*RDMLRL
Trigger: CAAGCGCAGCATGTCCCTCAAGGTGCACTCACTGCA...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGCAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSQDSGP*VPPGAG
Trigger: ACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGCATGGGGGCAAGCAATaGGGTCTAGGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSHGGKQ*GLGCAS
Trigger: GGAGGCGCAGCCTAGACCCAATTGCTTGCCCCCATG...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGGCTCCCGTGACCGTCTaGACCAGCTGTCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLAPVTV*TSCQAV
Trigger: GACAGCTTGACAGCTGGTCAAGACGGTCACGGGAGC...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCTGGCACAGGCAGGAGAGGGGTTGGTaGTGCCCACCTAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: DRLLRLTQAPTGQPLWHRQERGW*CPPRAP
Trigger: GGGAGCTCTAGGTGGGCACAACCAACCCCTCTCCTG...CCTGTGCCAGAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp GCTCACTGTGCCCGTCCTCCTCCTCTTCTTCCTCTTCTCCCTGACTaGCACCCTCTTCCTCCTCCTCCTCCTCCCGTCCACTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: AHCARPPPLLPLLPD*HPLPPPPPPVHCHH
Trigger: GTGGTGGCAGTGGACGGGAGGAGGAGGAGGAGGAAGAGGGTGGCAGTCAGGGAGAAGAGGAAGAAGAGGAGGAGGACGGGCACAGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCTCCTCCAGCTTCACCTaGGCCCCCAGCCCATCAGTG +
Preference number: 5 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGSSSFT*APSPSV
Trigger: CACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGA...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTTCCAGCAGGAAGCGCTaGCCGCACTGGTCGCAGATC +
Preference number: 5 (lower is better)
Translates to: YGLTGLSLATATQAYSGCSSRKR*PHWSQI
Trigger: GATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGA...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCAGGGACATGCTGCGCTaGAAGGACTTTCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGRDMLR*KDFPQV
Trigger: GACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCCT...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGAGGGACATGCTGCGCTaGAAGGACTTTCCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLRDMLR*KDFPQV
Trigger: GACCTGCGGAAAGTCCTTCAAGCGCAGCATGTCCCT...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTGCAGTGAGTGCACCTaGAGGGACATGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLCSECT*RDMLRL
Trigger: CAAGCGCAGCATGTCCCTCAAGGTGCACTCACTGCA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGGAGGGACGAGGTACTGGAAGCGCTCATaGCAGTTCTCACATCTGAAC +
Preference number: 5 (lower is better)
Translates to: RQCYGRPTHRCTGPGGTRYWKRS*QFSHLN
Trigger: GTTCAGATGTGAGAACTGCAATGAGCGCTTCCAGTA...CCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGCCAGCCTGCATACCCCTCCTCGTCGGGGCCTCAGGCAGGGTACATCCAGCCGACCGCAGCTGGTACTaGTACTGGAAGCGCTCATTG +
Preference number: 5 (lower is better)
Translates to: LPACIPLLVGASGRVHPADRSWY*YWKRSL
Trigger: CAATGAGCGCTTCCAGTACAAGTACCAGCTGCGGTC...GGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGGTATGCAGGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCCCGCCGGGGAGTCAGTaGTCTTCTCAACCAGCAACA +
Preference number: 5 (lower is better)
Translates to: APKAGAASQPVCPRRVWLPPGSQ*SSQPAT
Trigger: TGTTGCTGGTTGAGAAGACAACTGACTCCCCGGCGG...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680014.1
CDS GCA 90 bp CTGTCTGCCTGTGCAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTTaGCGCACTGGTCGCAGATCTGCATGCGGCTGTGGGTCACATTCA +
Preference number: 5 (lower is better)
Translates to: LSACAAAARSPAGSA*RTGRRSACGCGSHS
Trigger: TGAATGTGACCCACAGCCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAGGCAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS GCA 90 bp CCACATGTCACACACTGGATGTTGCGCTCGCAGTCTGTCTGCCTGTaGAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTTGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: PHVTHWMLRSQSVCL*SSSSLSSRKRLPHW
Trigger: CCAGTGCGGCAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCGCAACATCCAGTGTGTGACATGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CCA 90 bp CCGGCACCTGGCTTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTaGTTGTTGAGGTTCACCTCCACGATGATCTGGGATTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PAPGFPSGPVDTCSV*LLRFTSTMIWDCSL
Trigger: CAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCCAGGTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCACACGCTGCAGCTGCTaGTTCTGGGTGAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGTRCSC*FWVKSE
Trigger: CTCACTCTTCACCCAGAACAAGCAGCTGCAGCGTGT...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTTGGACGTTGGCCGCGTaGACCAGCAGCTTGGACGTA +
Preference number: 5 (lower is better)
Translates to: YGLTGLSLATATQAYSGCWTLAA*TSSLDV
Trigger: TACGTCCAAGCTGCTGGTCAACGCGGCCAACGTCCA...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CTCCAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCACGTGCAGTGTCTGGTaGTTGAGGTTCACCTCCACG +
Preference number: 5 (lower is better)
Translates to: LQDSGPLVPPGAGQGSLGTCSVW*LRFTST
Trigger: CGTGGAGGTGAACCTCAACAACCAGACACTGCACGT...GCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCTCCAGCAGGAAGCGCTaGCCGCACTGGTCGCAGATC +
Preference number: 5 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLSSRKR*PHWSQI
Trigger: GATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGA...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGTCACACACTGGATGTaGCGCTCGCAGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSVTHWM*RSQSVC
Trigger: GCAGACAGACTGCGAGCGCAACATCCAGTGTGTGAC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GGACATGGGGATAGGCTGCTGAGGCTGACCCAGGCTCCAACTGGCCAACCCCTCGTCACACACTGGATGTaGCGCTCGCAGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GHGDRLLRLTQAPTGQPLVTHWM*RSQSVC
Trigger: GCAGACAGACTGCGAGCGCAACATCCAGTGTGTGAC...GAGGGGTTGGCCAGTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGCAGGAGAGGGGTTGGTaGTGCCCACCTAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEQERGW*CPPRAP
Trigger: GGGAGCTCTAGGTGGGCACAACCAACCCCTCTCCTG...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp GCTTTGCCACATGTCACACACTGGATGTTGCGCTCGCAGTCTGTCTaGCTGTGCAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTTGCCG +
Preference number: 5 (lower is better)
Translates to: ALPHVTHWMLRSQSV*LCSSSSLSSRKRLP
Trigger: CGGCAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCGCAACATCCAGTGTGTGACATGTGGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGTGGACGTTGGCCGCGTaGACCAGCAGCTTGGACGTA +
Preference number: 5 (lower is better)
Translates to: PVPVGDPGASDGGWKPMEWTLAA*TSSLDV
Trigger: TACGTCCAAGCTGCTGGTCAACGCGGCCAACGTCCA...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGGCGTCCAGCAGCTCTaGGCAGGACGCAGCGATGTC +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIGVQQL*AGRSDV
Trigger: GACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGCC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGTGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLCSVWL*RFTSTM
Trigger: CATCGTGGAGGTGAACCTCAACAACCAGACACTGCA...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCAGGTACCAGCGGTTGTaGAAAACTCGTGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: APKAGAASQPVCPRRVWLRYQRL*KTRGHF
Trigger: GAAGTGCCCACGAGTTTTCAACAACCGCTGGTACCT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGCACAGGCCCAGCTTCTTGAAAGCTTaGCCACATGTCACACACTGG +
Preference number: 5 (lower is better)
Translates to: QAPLPAVLWAPHPPVHRPSFLKA*PHVTHW
Trigger: CCAGTGTGTGACATGTGGCAAAGCTTTCAAGAAGCT...GGGCCTGTGCACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCGTGAAGGGCATGTCCTaGGTGTGGGCAACCATGTGC +
Preference number: 5 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGVKGMS*VWATMC
Trigger: GCACATGGTTGCCCACACCAAGGACATGCCCTTCAC...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIALPQC*RLSDWV
Trigger: GACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCATGGGGGCAAGCAATaGGGTCTAGGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: STLKPYQHCPSLILGLCPHGGKQ*GLGCAS
Trigger: GGAGGCGCAGCCTAGACCCAATTGCTTGCCCCCATG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGTCTCTGACCTCTGCTaGTCAGTATGGCCTGACAGG +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSVSDLC*SVWPDR
Trigger: CCTGTCAGGCCATACTGACAAGCAGAGGTCAGAGAC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCGCGGCTAGCACACCCTaGTGTGCCGGAAAGACGCTG +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIAASTP*CAGKTL
Trigger: CAGCGTCTTTCCGGCACACAAGGGTGTGCTAGCCGC...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: VWPDRSQPGHGHSGLLRLCSVWL*RFTSTM
Trigger: CATCGTGGAGGTGAACCTCAACAACCAGACACTGCA...CAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCACGTGCAGTGTCTGGTaGTTGAGGTTCACCTCCACG +
Preference number: 5 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGTCSVW*LRFTST
Trigger: CGTGGAGGTGAACCTCAACAACCAGACACTGCACGT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCTCCTCCAGCTTCACCTaGGCCCCCAGCCCATCAGTG +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFISSSFT*APSPSV
Trigger: CACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGA...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp ACAATGGCCCAAGTGAAGAGAGTGCTTAGCACCAGGGACACAGGCTCCTATCCCACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 5 (lower is better)
Translates to: TMAQVKRVLSTRDTGSYPTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...GGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCATGGGGGCAAGCAATaGGGTCTAGGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIHGGKQ*GLGCAS
Trigger: GGAGGCGCAGCCTAGACCCAATTGCTTGCCCCCATG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGCAGGACAGGGTTTCATaGCCAGCTCCCCACCAGTGT +
Preference number: 5 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVQDRVS*PAPHQC
Trigger: ACACTGGTGGGGAGCTGGCAATGAAACCCTGTCCTG...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGGCTGAGGTGCCATTATaGCTTCTGGCCTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSAEVPL*LLALWS
Trigger: AGACCACAAGGCCAGAAGCAATAATGGCACCTCAGC...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGGACTCAGGACCCTTGGTGCCACCTGGTGCAGGTCAGGGATCCCTGGGCCTGCCTGTACACGAGCAGTaGTCAATGGTCTCAACACAC +
Preference number: 5 (lower is better)
Translates to: QDSGPLVPPGAGQGSLGLPVHEQ*SMVSTH
Trigger: GTGTGTTGAGACCATTGACAACTGCTCGTGTACAGG...CAGGCCCAGGGATCCCTGACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp CGTATAGATGAAGTTGAGGATCTGCTGCAGGCCACCAGGTGCCAGTaGCTCCAGGGACAGCTCCACACGCTGCAGCTGCTTGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: RIDEVEDLLQATRCQ*LQGQLHTLQLLVLG
Trigger: ACCCAGAACAAGCAGCTGCAGCGTGTGGAGCTGTCCCTGGAGGCACTGGCACCTGGTGGCCTGCAGCAGATCCTCAACTTCATCTATACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 90 bp CAGCGGTTGTTGAAAACTCGTGGGCACTTCTGGCATGGATGGTGCTaGTTCTCCTCCAGCTTCACCTTGGCCCCCAGCCCATCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: QRLLKTRGHFWHGWC*FSSSFTLAPSPSVA
Trigger: AGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGTTTTCAACAACCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCCAGGGACAGGTTGTGGCAGGACCTAGAGGGAGGATAAGGCCTAGAGCGGGCAGGTACCAGCGGTTGTaGAAAACTCGTGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: SQGQVVAGPRGRIRPRAGRYQRL*KTRGHF
Trigger: GAAGTGCCCACGAGTTTTCAACAACCGCTGGTACCT...GCCCGCTCTAGGCCTTATCCTCCCTCTAGGTCCTGCCACAACCTGTCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GCCCCCAAAGCTGGTGCTGCCAGTCAGCCTGTCTGCCCAAGGAGGGTCTGGCTCAGGGACCAAAGCTTCTaGAAAGCTTTGCCACATGTC +
Preference number: 5 (lower is better)
Translates to: APKAGAASQPVCPRRVWLRDQSF*KALPHV
Trigger: GACATGTGGCAAAGCTTTCAAGAAGCTTTGGTCCCT...GAGCCAGACCCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TTGTCAGTATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCGACCGCAGCTGGTACTaGTACTGGAAGCGCTCATTG +
Preference number: 5 (lower is better)
Translates to: LSVWPDRSQPGHGHSGLLDRSWY*YWKRSL
Trigger: CAATGAGCGCTTCCAGTACAAGTACCAGCTGCGGTC...GAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCCAGGACAGGGTTTCATaGCCAGCTCCCCACCAGTGT +
Preference number: 5 (lower is better)
Translates to: STLKPYQHCPSLILGLCPQDRVS*PAPHQC
Trigger: ACACTGGTGGGGAGCTGGCAATGAAACCCTGTCCTG...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 90 bp AGGTACCAGCGGTTGTTGAAAACTCGTGGGCACTTCTGGCATGGATaGTGCTGCTTCTCCTCCAGCTTCACCTTGGCCCCCAGCCCATCA +
Preference number: 5 (lower is better)
Translates to: RYQRLLKTRGHFWHG*CCFSSSFTLAPSPS
Trigger: TGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGTTTTCAACAACCGCTGGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTAGCACCTCGTGGACGTaGGCCGCGTTGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YVYSSNINWARKLLALYPSTSWT*AALTSS
Trigger: GCTGCTGGTCAACGCGGCCAACGTCCACGAGGTGCT...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGAGGTACCAGCGGTTGTaGAAAACTCGTGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: PVPVGDPGASDGGWKPMERYQRL*KTRGHF
Trigger: GAAGTGCCCACGAGTTTTCAACAACCGCTGGTACCT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCTCCAGGTACCAGCGGTaGTTGAAAACTCGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: STLKPYQHCPSLILGLCPSRYQR*LKTRGH
Trigger: GTGCCCACGAGTTTTCAACAACCGCTGGTACCTGGA...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CCTGCCTGCCCCACTCCACACAGTGAAGCACTGGTCTGCAGTCTCCGCACCTCGAGCTTCTTGAAAGCTTaGCCACATGTCACACACTGG +
Preference number: 5 (lower is better)
Translates to: PACPTPHSEALVCSLRTSSFLKA*PHVTHW
Trigger: CCAGTGTGTGACATGTGGCAAAGCTTTCAAGAAGCT...CGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGAGTGGGGCAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGAGGGACCAAAGCTTCTaGAAAGCTTTGCCACATGTC +
Preference number: 5 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVRDQSF*KALPHV
Trigger: GACATGTGGCAAAGCTTTCAAGAAGCTTTGGTCCCT...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp CTGAACATGCAGGCTCCTTTACCGGCAGTGCTATGGGCGCCCCACCCACCGGTGTACTGGAAGCGCTCATaGCAGTTCTCACATCTGAAC +
Preference number: 5 (lower is better)
Translates to: LNMQAPLPAVLWAPHPPVYWKRS*QFSHLN
Trigger: GTTCAGATGTGAGAACTGCAATGAGCGCTTCCAGTA...CACCGGTGGGTGGGGCGCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTACACCTCCTCAGGGGTaGTGGGGGTGGCACGCCAAC +
Preference number: 5 (lower is better)
Translates to: YVYSSNINWARKLLALYPTPPQG*WGWHAN
Trigger: GTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGT...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGCCCTGCCTCAGTGCTaGCGGCTCTCAGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPALPQC*RLSDWV
Trigger: GACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGTTATTGCTTCTGGCCTaGTGGTCTGGCCGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVLLLLA*WSGRKG
Trigger: TCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAA...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TATGGCCTGACAGGTCTCAGCCTGGCCACGGCCACTCAGGCCTACTCAGGCTGTCCTGTACACGAGCAGTaGTCAATGGTCTCAACACAC +
Preference number: 5 (lower is better)
Translates to: YGLTGLSLATATQAYSGCPVHEQ*SMVSTH
Trigger: GTGTGTTGAGACCATTGACAACTGCTCGTGTACAGG...ACAGCCTGAGTAGGCCTGAGTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGCCGCCGGGGAGTCAGTaGTCTTCTCAACCAGCAACT +
Preference number: 5 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEPPGSQ*SSQPAT
Trigger: AGTTGCTGGTTGAGAAGACAACTGACTCCCCGGCGG...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS-3UTR CAA 90 bp CATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAAGAGCACGATGATCTGGGATaGCTCCCTGCGGCTGTAGGT +
Preference number: 5 (lower is better)
Translates to: HAGKAIVSGSGGGLRCKEHDDLG*LPAAVG
Trigger: ACCTACAGCCGCAGGGAGCAATCCCAGATCATCGTG...CTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAAGACCGCAGCTGGTACTaGTACTGGAAGCGCTCATTG +
Preference number: 5 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQDRSWY*YWKRSL
Trigger: CAATGAGCGCTTCCAGTACAAGTACCAGCTGCGGTC...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CATGAGCCAGGGTTGAAGGCTCCCAGAACTGTGGCCACAGGGCTTGAGTTCATCCAGCTCCAACATCAATaGGGCAAGGAAGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: HEPGLKAPRTVATGLEFIQLQHQ*GKEAAG
Trigger: GCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTG...GATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp ACTGGAACTGCTGAGGTGCCATTATTGCTTCTGGCCTTGTGGTCTGGCCGGAAACACGATGATCTGGGATaGCTCCCTGCGGCTGTAGGT +
Preference number: 5 (lower is better)
Translates to: TGTAEVPLLLLALWSGRKHDDLG*LPAAVG
Trigger: ACCTACAGCCGCAGGGAGCAATCCCAGATCATCGTG...TTTCCGGCCAGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CAGCCATGCTGGGAAGGCAATAGTGTCGGGGAGTGGTGGGGGTTTAAGGTGCAATGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATG +
Preference number: 5 (lower is better)
Translates to: QPCWEGNSVGEWWGFKVQCSVWL*RFTSTM
Trigger: CATCGTGGAGGTGAACCTCAACAACCAGACACTGCA...TTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCAGTGCCTGTGGGAGATCCTGGTGCCAGTGATGGGGGTTGGAAACCCATGGAGAGGGACCAAAGCTTCTaGAAAGCTTTGCCACATGTC +
Preference number: 5 (lower is better)
Translates to: PVPVGDPGASDGGWKPMERDQSF*KALPHV
Trigger: GACATGTGGCAAAGCTTTCAAGAAGCTTTGGTCCCT...CTCCATGGGTTTCCAACCCCCATCACTGGCACCAGGATCTCCCACAGGCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TTCTGGCCTTGTGGTCTGGCCGGAAAGGAGCCCCCACCAACAATGGCCCAAGTGCCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FWPCGLAGKEPPPTMAQVPGWCG*DYKSSD
Trigger: ATCTGAGGATTTATAATCCAAGCCACACCACCCTGG...CACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCCAGACCACAAGGCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCATGCAGTGAGTGCACCTaGAGGGACATGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPCSECT*RDMLRL
Trigger: CAAGCGCAGCATGTCCCTCAAGGTGCACTCACTGCA...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp AGCACCTTGAAACCCTACCAGCACTGCCCAAGCCTCATCCTAGGACTCTGCCCCTACTGGAAGCGCTCATaGCAGTTCTCACATCTGAAC +
Preference number: 5 (lower is better)
Translates to: STLKPYQHCPSLILGLCPYWKRS*QFSHLN
Trigger: GTTCAGATGTGAGAACTGCAATGAGCGCTTCCAGTA...GGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAGGGTTTCAAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGATCACTCGGGCACCTaGGGCCTGCCCAAATCTGTA +
Preference number: 5 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPDHSGT*GLPKSV
Trigger: TACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCGTCTCTGACCTCTGCTaGTCAGTATGGCCTGACAGG +
Preference number: 5 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGVSDLC*SVWPDR
Trigger: CCTGTCAGGCCATACTGACAAGCAGAGGTCAGAGAC...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAACACGCTGCAGCTGCTaGTTCTGGGTGAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPTRCSC*FWVKSE
Trigger: CTCACTCTTCACCCAGAACAAGCAGCTGCAGCGTGT...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTACGTGCAGTGTCTGGTaGTTGAGGTTCACCTCCACG +
Preference number: 5 (lower is better)
Translates to: YVYSSNINWARKLLALYPTCSVW*LRFTST
Trigger: CGTGGAGGTGAACCTCAACAACCAGACACTGCACGT...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGGTCACACACTGGATGTaGCGCTCGCAGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSVTHWM*RSQSVC
Trigger: GCAGACAGACTGCGAGCGCAACATCCAGTGTGTGAC...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTCAGCTCCAACATCAATaGGGCAAGGAAGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: YVYSSNINWARKLLALYPQLQHQ*GKEAAG
Trigger: GCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTG...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp CCCAGAGAACAACCAGGGTGGTGTGGCTTGGATTATAAATCCTCAGATCACTCGTCCAGGTACCAGCGGTaGTTGAAAACTCGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: PREQPGWCGLDYKSSDHSSRYQR*LKTRGH
Trigger: GTGCCCACGAGTTTTCAACAACCGCTGGTACCTGGA...CGAGTGATCTGAGGATTTATAATCCAAGCCACACCACCCTGGTTGTTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp TACGTCTACAGCTCCAACATCAATTGGGCAAGGAAGCTGCTGGCACTGTACCCTTTATTGCTTCTGGCCTaGTGGTCTGGCCGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: YVYSSNINWARKLLALYPLLLLA*WSGRKG
Trigger: TCCTTTCCGGCCAGACCACAAGGCCAGAAGCAATAA...AGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGAGCTGTAGACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCAGCTGAGGTGCCATTATaGCTTCTGGCCTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: EQRWTQPHLFLLVWDIWPAEVPL*LLALWS
Trigger: AGACCACAAGGCCAGAAGCAATAATGGCACCTCAGC...TGGCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCAGCTTCTTGAAAGCTTaGCCACATGTCACACACTGG +
Preference number: 5 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGSFLKA*PHVTHW
Trigger: CCAGTGTGTGACATGTGGCAAAGCTTTCAAGAAGCT...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS-3UTR CAA 90 bp GGGAGCAGAGATGGACACAGCCACACTTGTTCCTTCTGGTGTGGGATATATGGCCCAGGGTGGTGTGGCTaGGATTATAAATCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GSRDGHSHTCSFWCGIYGPGWCG*DYKSSD
Trigger: ATCTGAGGATTTATAATCCAAGCCACACCACCCTGG...GCCATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATAGCGGCTAGCACACCCTaGTGTGCCGGAAAGACGCTG +
Preference number: 5 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIAASTP*CAGKTL
Trigger: CAGCGTCTTTCCGGCACACAAGGGTGTGCTAGCCGC...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS-3UTR CAA 90 bp ACTAGGAAACATGTAGCTTATGGAACCTTCCTCCCCATATTAAAGGCAGGAATACAGGACTCAGGACCCTaGGTGCCACCTGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TRKHVAYGTFLPILKAGIQDSGP*VPPGAG
Trigger: ACCTGCACCAGGTGGCACCAAGGGTCCTGAGTCCTG...TATTCCTGCCTTTAATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp CTGCAGCCCGTCCTCCCGGCCCAGAACCACGGTGGCTaGGCTTGGCCCGGCACCTGGCTTCCCCTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: LQPVLPAQNHGG*AWPGTWLPLWP
Trigger: GGGCCAGAGGGGAAGCCAGGTGCCGGGCCAAGCCCAGCCACCGTGGTTCTGGGCCGGGAGGACGGGCTGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CCA 72 bp CGGCCCTCGGGCCGATGCAGAGGCCACTCCAGGGGGTaGCTTTGGCCTCTTCCCACCCCGCCGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RPSGRCRGHSRG*LWPLPTPPPSF
Trigger: GAAGCTGGGCGGCGGGGTGGGAAGAGGCCAAAGCCACCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 72 bp CCCCAGCCCATCAGTGGCTGGCGGCCCTCGGGCCGATaGAGAGGCCACTCCAGGGGGTGGCTTTGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: PQPISGWRPSGR*RGHSRGWLWPL
Trigger: AAGAGGCCAAAGCCACCCCCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp TGTCACAGTAGTAGGGCGGCGCAGCTGGAGTGCAGCTaGCAGCCGGCTGGGCCAGGGCCACAGTGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: CHSSRAAQLECS*QPAGPGPQCPD
Trigger: GTCCGGGCACTGTGGCCCTGGCCCAGCCGGCTGCCAGCTGCACTCCAGCTGCGCCGCCCTACTACTGTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp CTCCAGCTTCACCTTGGCCCCCAGCCCATCAGTGGCTaGCGGCCCTCGGGCCGATGCAGAGGCCACTCCAGG +
Preference number: 6 (lower is better)
Translates to: LQLHLGPQPISG*RPSGRCRGHSR
Trigger: CCTGGAGTGGCCTCTGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp CAGCGGGTGCACGGGTGCAGCTCGGCAGCTAGTTGTTaGCGTTCATCCTCCCGCCGGGGCTGGCAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: QRVHGCSSAASC*RSSSRRGWQWW
Trigger: CCACCACTGCCAGCCCCGGCGGGAGGATGAACGCCAACAACTAGCTGCCGAGCTGCACCCGTGCACCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CAA 90 bp GGGCACTTCTGGCATGGATGGTGCTGCTTCTCCTCCAGCTTCACCTaGGCCCCCAGCCCATCAGTGGCTGGCGGCCCTCGGGCCGATGCA +
Preference number: 6 (lower is better)
Translates to: GHFWHGWCCFSSSFT*APSPSVAGGPRADA
Trigger: TGCATCGGCCCGAGGGCCGCCAGCCACTGATGGGCTGGGGGCCAAGGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS TCA 72 bp TTGGCAGGACGCAGCGATGTCAGCCATCTGCAGCAATaGGGCGGCGCTGAGCACCTCGTGGACGTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: LAGRSDVSHLQQ*GGAEHLVDVGR
Trigger: GCGGCCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 72 bp AGGCGGCTAGCACACCCTTGTGTGCCGGAAAGACGCTaGGCTGGGGCACCAGCACCAAGTCCACGTCGCAGA +
Preference number: 6 (lower is better)
Translates to: RRLAHPCVPERR*AGAPAPSPRRR
Trigger: TCTGCGACGTGGACTTGGTGCTGGTGCCCCAGCGCAGCGTCTTTCCGGCACACAAGGGTGTGCTAGCCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 72 bp CCCAATGGTGGCAGGCACTGTGCCACCAGCAGTCCCTaGCCCGTCCTCAACACGCACCGAGTAAGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: PNGGRHCATSSP*PVLNTHRVRVR
Trigger: CCTGACCCTTACTCGGTGCGTGTTGAGGACGGGGCAGGGACTGCTGGTGGCACAGTGCCTGCCACCATTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 72 bp TGTGCAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTTaGCGCACTGGTCGCAGATCTGCATGCGGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: CAAAARSPAGSA*RTGRRSACGCG
Trigger: CCCACAGCCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CAA 72 bp CTGTGCAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTaGCCGCACTGGTCGCAGATCTGCATGCGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LCSSSSLSSRKR*PHWSQICMRLW
Trigger: CCACAGCCGCATGCAGATCTGCGACCAGTGCGGCAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS TCA 72 bp AGATCTTGGGCAGGCCTGGGGTGTCGGCCTCCTGCTTaGTGTCACAGTAGTAGGGCGGCGCAGCTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: RSWAGLGCRPPA*CHSSRAAQLEC
Trigger: GCACTCCAGCTGCGCCGCCCTACTACTGTGACATCAAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS GCA 72 bp AGCAGCTCTTGGCAGGACGCAGCGATGTCAGCCATCTaGAGCAATGAGGCGGCGCTGAGCACCTCGTGGACG +
Preference number: 6 (lower is better)
Translates to: SSSWQDAAMSAI*SNEAALSTSWT
Trigger: CGTCCACGAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAAGAGCTGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp GCTAGCACACCCTTGTGTGCCGGAAAGACGCTGCGCTaGGGCACCAGCACCAAGTCCACGTCGCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ASTPLCAGKTLR*GTSTKSTSQRS
Trigger: TGACCTCTGCGACGTGGACTTGGTGCTGGTGCCCCAGCGCAGCGTCTTTCCGGCACACAAGGGTGTGCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp GCCATCTGCAGCAATGAGGCGGCGCTGAGCACCTCGTaGACGTTGGCCGCGTTGACCAGCAGCTTGGACGTA +
Preference number: 6 (lower is better)
Translates to: AICSNEAALSTS*TLAALTSSLDV
Trigger: TACGTCCAAGCTGCTGGTCAACGCGGCCAACGTCCACGAGGTGCTCAGCGCCGCCTCATTGCTGCAGATGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp CCTGGTGGGCCTAGAGAGCGGGCGTCCAGCAGCTCTTaGCAGGACGCAGCGATGTCAGCCATCTGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: PGGPRERASSSS*QDAAMSAICSN
Trigger: ATTGCTGCAGATGGCTGACATCGCTGCGTCCTGCCAAGAGCTGCTGGACGCCCGCTCTCTAGGCCCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CAA 90 bp CCTGGCTTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATGATCTGGGATTGCTCCCTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PGFPSGPVDTCSVWL*RFTSTMIWDCSLRL
Trigger: CAGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CAA 90 bp GCACCTGGCTTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTGGTaGTTGAGGTTCACCTCCACGATGATCTGGGATTGCTCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: APGFPSGPVDTCSVW*LRFTSTMIWDCSLR
Trigger: CCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CAA 90 bp CCTGGCTTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATGATCTGGGATTGCTCCCTGCGGCGA +
Preference number: 6 (lower is better)
Translates to: PGFPSGPVDTCSVWL*RFTSTMIWDCSLRR
Trigger: TCGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS GCA 72 bp AAGTCCACGTCGCAGAGGTCAGGCTGGAAGAGGCGCTaGTCGTTCAGGCGGCCCATCAAGCAGGCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: KSTSQRSGWKRR*SFRRPIKQAKC
Trigger: GCACTTTGCCTGCTTGATGGGCCGCCTGAACGAGCAGCGCCTCTTCCAGCCTGACCTCTGCGACGTGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp GTCAGGGCCCTCGCGGGCATAGATCTTGGGCAGGCCTaGGGTGTCGGCCTCCTGCTTGATGTCACAGTAGTA +
Preference number: 6 (lower is better)
Translates to: VRALAGIDLGQA*GVGLLLDVTVV
Trigger: TACTACTGTGACATCAAGCAGGAGGCCGACACCCCAGGCCTGCCCAAGATCTATGCCCGCGAGGGCCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CAA 72 bp CCTCCACCAGCGAGAACTCAGCCGCCGGGGAGTCAGTaGTCTTCTCAACCAGCAACTGGCGGCCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: PPPARTQPPGSQ*SSQPATGGLML
Trigger: CAGCATGAGGCCGCCAGTTGCTGGTTGAGAAGACAACTGACTCCCCGGCGGCTGAGTTCTCGCTGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS CAA 72 bp CCTCCACCAGCGAGAACTCAGCCGCCGGGGAGTCAGTaGTCTTCTCAACCAGCAACATGGTGCCGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: PPPARTQPPGSQ*SSQPATWCRGA
Trigger: AGCGCCACGGCACCATGTTGCTGGTTGAGAAGACAACTGACTCCCCGGCGGCTGAGTTCTCGCTGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680014.1
CDS GCA 72 bp ACACACTGGATGTTGCGCTCGCAGTCTGTCTGCCTGTaGAGCAGCAGCTCGCTCTCCAGCAGGAAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: THWMLRSQSVCL*SSSSLSSRKRL
Trigger: CAAGCGCTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCGCAACATCCAGTGTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS GCA 72 bp TGGTTGTTGAGGTTCACCTCCACGATGATCTGGGATTaGTCCCTGCGGCGAGTAAGGGTCAGGGCCCTCGCG +
Preference number: 6 (lower is better)
Translates to: WLLRFTSTMIWD*SLRRVRVRALA
Trigger: CGCGAGGGCCCTGACCCTTACTCGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS CAA 72 bp CTGGTTGTTGAGGTTCACCTCCACGATGATCTGGGATaGCTCCCTGCGGCGAGTAAGGGTCAGGGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: LVVEVHLHDDLG*LPAASKGQGPR
Trigger: GCGAGGGCCCTGACCCTTACTCGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS GCA 72 bp CATGTCACACACTGGATGTTGCGCTCGCAGTCTGTCTaGCTGTGCAGCAGCAGCTCGCTCTCCAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: HVTHWMLRSQSV*LCSSSSLSSRK
Trigger: CTTCCTGCTGGAGAGCGAGCTGCTGCTGCACAGGCAGACAGACTGCGAGCGCAACATCCAGTGTGTGACATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CCA 72 bp GGCTTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTaGTTGTTGAGGTTCACCTCCACGATGATCTGGGAT +
Preference number: 6 (lower is better)
Translates to: GFPSGPVDTCSV*LLRFTSTMIWD
Trigger: ATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CAA 72 bp CCCTCTGGCCCCGTGGACACGTGCAGTGTCTGGTTGTaGAGGTTCACCTCCACGATGATCTGGGATTGCTCC +
Preference number: 6 (lower is better)
Translates to: PSGPVDTCSVWL*RFTSTMIWDCS
Trigger: GGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS CAA 90 bp GTGCAGTGTCTGGTTGTTGAGGTTCACCTCCACGATGATCTGGGATaGCTCCCTGCGGCTGTAGGTGCCAGAACCCCCAAGCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VQCLVVEVHLHDDLG*LPAAVGARTPKLFL
Trigger: GAGGAAGAGCTTGGGGGTTCTGGCACCTACAGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CCA 72 bp AGTGTCTGGTTGTTGAGGTTCACCTCCACGATGATCTaGGATTGCTCCCTGCGGCGAGTAAGGGTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SVWLLRFTSTMI*DCSLRRVRVRA
Trigger: GGCCCTGACCCTTACTCGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505904.1
CDS CAA 72 bp CTGGTTGTTGAGGTTCACCTCCACGATGATCTGGGATaGCTCCCTGCGGCTGTAGGTGCCAGAACCCCCAAG +
Preference number: 6 (lower is better)
Translates to: LVVEVHLHDDLG*LPAAVGARTPK
Trigger: CTTGGGGGTTCTGGCACCTACAGCCGCAGGGAGCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232974.11
ENST00000680014.1
CDS CAA 72 bp TTCCCCTCTGGCCCCGTGGACACGTGCAGTGTCTGGTaGTTGAGGTTCACCTCCACGATGATCTGGGATTGC +
Preference number: 6 (lower is better)
Translates to: FPSGPVDTCSVW*LRFTSTMIWDC
Trigger: GCAATCCCAGATCATCGTGGAGGTGAACCTCAACAACCAGACACTGCACGTGTCCACGGGGCCAGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1
CDS GCA 72 bp AGTTGTCTTCTCAACCAGCAACTGGCGGCCTCATGCTaGATAGGGCCACCCAGGGCAGGAGATTTAAATCCC +
Preference number: 6 (lower is better)
Translates to: SCLLNQQLAASC*IGPPRAGDLNP
Trigger: GGGATTTAAATCTCCTGCCCTGGGTGGCCCTATGCAGCATGAGGCCGCCAGTTGCTGGTTGAGAAGACAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232974.11
CDS CCA 72 bp AGGTACCAGCGGTTGTTGAAAACTCGTGGGCACTTCTaGCATGGATGGTGCTGCTTCTCCTCCAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RYQRLLKTRGHF*HGWCCFSSSFT
Trigger: GGTGAAGCTGGAGGAGAAGCAGCACCATCCATGCCAGAAGTGCCCACGAGTTTTCAACAACCGCTGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232974.11
ENST00000505904.1
ENST00000680014.1