RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB46 (Homo sapiens)

Ensembl gene IDs: ENSG00000130584

Ensembl transcript IDs: ENST00000245663.9, ENST00000302995.2, ENST00000395104.5, ENST00000460757.1, ENST00000480766.1, ENST00000650966.1

Found 714 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCCCGTCCAGGAGGGGTCAGCAGGAGCGGCCGGGCTGGGCCATaGGCAGAACAGGACGGGCAGAGCCCGGGGTGGACGTGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: PARPGGVSRSGRAGP*AEQDGQSPGWTWQP
Trigger: GGGCTGCCACGTCCACCCCGGGCTCTGCCCGTCCTGTTCTGCCCATGGCCCAGCCCGGCCGCTCCTGCTGACCCCTCCTGGACGGGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 90 bp TGCTCAGGCCAGGGGCCTCTGGGCCGAACACACCACCCCGCCCAGTaGCCACTGGACCCGGCCACAGGCCCATCACGTGTCCAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: CSGQGPLGRTHHPAQ*PLDPATGPSRVQAR
Trigger: CCTGGCTTGGACACGTGATGGGCCTGTGGCCGGGTCCAGTGGGCACTGGGCGGGGTGGTGTGTTCGGCCCAGAGGCCCCTGGCCTGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp CTCCAGGCGAGGCCAAGCCGTCCTGGCACTGGCTGCCCCCAGGGCTaGGCAAGTCCATCCAGGGCTGGGCAAGTCCATCCAGGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: LQARPSRPGTGCPQG*ASPSRAGQVHPGLG
Trigger: GCCCAGGCCTGGATGGACTTGCCCAGCCCTGGATGGACTTGCCCAGCCCTGGGGGCAGCCAGTGCCAGGACGGCTTGGCCTCGCCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTaGGCATGGAGATGCCTTCACCTGGCAGCAGCCGGCAGAGGACTC +
Preference number: 1 (lower is better)
Translates to: VGQKLEVHPPQLPTG*AWRCLHLAAAGRGL
Trigger: GAGTCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR TCA 90 bp ACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACACTTaGGAGCTCTCTCGCCTGGGCAGCTGCACCCAGCTGGAGCCCGGG +
Preference number: 1 (lower is better)
Translates to: TRLFGHPVPLLLPHT*ELSRLGSCTQLEPG
Trigger: CCCGGGCTCCAGCTGGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 90 bp GCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTaGACACGACTGAGCCGAGGCCCTTGCAGAGGGAACCTGGTGTGG +
Preference number: 1 (lower is better)
Translates to: AEPGVDVAAQGSPRK*TRLSRGPCRGNLVW
Trigger: CCACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp GACGGTGGCAGGGCTCTCTGTGCACCTGGATTCTACAGGCTGCCATaGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGT +
Preference number: 1 (lower is better)
Translates to: DGGRALCAPGFYRLP*ATAAPRATAAATGS
Trigger: ACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCAGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCACCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp TCCCACACACTTGAGAGCTCTCTCGCCTGGGCAGCTGCACCCAGCTaGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAG +
Preference number: 1 (lower is better)
Translates to: SHTLESSLAWAAAPS*SPGPGRQSSGRSTE
Trigger: CTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 90 bp ACCCAGTTCCCCTCCTGCTCCCACACACTTGAGAGCTCTCTCGCCTaGGCAGCTGCACCCAGCTGGAGCCCGGGACCCGGACGCCAAAGC +
Preference number: 1 (lower is better)
Translates to: TQFPSCSHTLESSLA*AAAPSWSPGPGRQS
Trigger: GCTTTGGCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAGGAGGGGAACTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 90 bp GGTAAGACGGTGGCAGGGCTCTCTGTGCACCTGGATTCTACAGGCTaGCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAG +
Preference number: 1 (lower is better)
Translates to: GKTVAGLSVHLDSTG*HGPRLHHGPRLQPQ
Trigger: CTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCAGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCACCGTCTTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp CAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATaGAGATGCCTTCACCTGGCAGCAGCCGGCAGAGGACTCGAGAAA +
Preference number: 1 (lower is better)
Translates to: QKLEVHPPQLPTGWA*RCLHLAAAGRGLEK
Trigger: TTTCTCGAGTCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR TCA 90 bp GGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACACGACTaGGCCGAGGCCCTTGCAGAGGGAACCTGGTGTGGCCTGAAGTGG +
Preference number: 1 (lower is better)
Translates to: GWTWQPKALRGSAHD*AEALAEGTWCGLKW
Trigger: CCACTTCAGGCCACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 90 bp CAGGCATCCTGGACAGGCCACAGGCCCTGCAGAAACCCACCCTCATaGCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: QASWTGHRPCRNPPS*QREPTLEEDCSAQL
Trigger: GAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCTGCAGGGCCTGTGGCCTGTCCAGGATGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 90 bp GATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTaGTCCCACACACTTGAGAGCTCTCTCGCCTGGGCAGCTGCACCC +
Preference number: 1 (lower is better)
Translates to: DIPLRRGCSVTQFPS*SHTLESSLAWAAAP
Trigger: GGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 90 bp AGCCAGGCTGGCCATCACAGGGGCCACTCACACACCCGCACCACCTaGTGGGGACTTAGGACCGTGCTCTCCCTTCACTCAAACCCACCC +
Preference number: 1 (lower is better)
Translates to: SQAGHHRGHSHTRTT*WGLRTVLSLHSNPP
Trigger: GGGTGGGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGTGTGTGAGTGGCCCCTGTGATGGCCAGCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp AGGGCTGGGCAAGTCCATCCAGGGCTGGGCAAGTCCATCCAGGCCTaGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGC +
Preference number: 1 (lower is better)
Translates to: RAGQVHPGLGKSIQA*AGRRLLRHPGQATG
Trigger: GCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGGATGGACTTGCCCAGCCCTGGATGGACTTGCCCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 90 bp CAGGCTGGCCATCACAGGGGCCACTCACACACCCGCACCACCTGCTaGGGACTTAGGACCGTGCTCTCCCTTCACTCAAACCCACCCTGT +
Preference number: 1 (lower is better)
Translates to: QAGHHRGHSHTRTTC*GLRTVLSLHSNPPC
Trigger: ACAGGGTGGGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGTGTGTGAGTGGCCCCTGTGATGGCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 90 bp TCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCGGACAC +
Preference number: 1 (lower is better)
Translates to: SWPLSPALRSPQPPS*GVCVMTAPARAPGH
Trigger: GTGTCCGGGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302995.2
3UTR GCA 90 bp GGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCCCTaGAGAAACCCACCCTCATGCCAGCGGGAGCCAACTCTGGAAGAG +
Preference number: 1 (lower is better)
Translates to: GWKKTPQASWTGHRP*RNPPSCQREPTLEE
Trigger: CTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCTGCAGGGCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 90 bp CACAGCACCGCAGTGGTGGCCTGTGCCAGAGGAGGGGGTGAAGGATaGAATGTCCTCATGGTGAGTGCTGTCAGAGGCAGGCCTGAACGA +
Preference number: 1 (lower is better)
Translates to: HSTAVVACARGGGEG*NVLMVSAVRGRPER
Trigger: TCGTTCAGGCCTGCCTCTGACAGCACTCACCATGAGGACATTCCATCCTTCACCCCCTCCTCTGGCACAGGCCACCACTGCGGTGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 90 bp TCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGTCAT +
Preference number: 1 (lower is better)
Translates to: SWPLSPALRSPQPPS*GVCVMTAPARAPCH
Trigger: ATGACAGGGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 90 bp GGCCACGTGAACCCACGGCCACAGAGAGGCAGGACGGCAGAGCCATaGTTTCCCACCGAGCGATTACGAGAACCTCTTCCCCCAATAGTA +
Preference number: 1 (lower is better)
Translates to: GHVNPRPQRGRTAEP*FPTERLREPLPPIV
Trigger: TACTATTGGGGGAAGAGGTTCTCGTAATCGCTCGGTGGGAAATCATGGCTCTGCCGTCCTGCCTCTCTGTGGCCGTGGGTTCACGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 90 bp TCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGCTGCTGTCACTTaGTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGC +
Preference number: 1 (lower is better)
Translates to: SQTTSSRGGAFAAVT*FTELLSWPQGKAVS
Trigger: GCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 90 bp GACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTaGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGG +
Preference number: 1 (lower is better)
Translates to: DMSFPSTPPEMDVLT*ASEIPHSSVGKLAR
Trigger: CCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302995.2
3UTR GCA 90 bp CCCTTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTaGTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAAC +
Preference number: 1 (lower is better)
Translates to: PFMTCLFPPRLLRWT*SPGPRKSHTLQSAN
Trigger: GTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR CCA 90 bp GACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTaGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTGCGAACA +
Preference number: 1 (lower is better)
Translates to: DMSFPSTPPEMDVLT*ASEIPHSSVGKLRT
Trigger: TGTTCGCAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 90 bp TGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTaGGAACAAGAACAGGAAATCTGCCACGCAGCAAACACTTGGGGA +
Preference number: 1 (lower is better)
Translates to: CSPGPRKSHTLQSAN*EQEQEICHAANTWG
Trigger: TCCCCAAGTGTTTGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp GCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAAACACTTaGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAAATGCC +
Preference number: 1 (lower is better)
Translates to: ANCEQEQEICHAANT*GGQWDTVGFREENA
Trigger: GGCATTTTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp GGGTGGCCTGAGAGCAGGGACTGGTACAAAACCCAGAGACATTGGTaGGTAGCAAAGGTCTGGTTTCCAAATGCATTTTGTAAGAAAGTC +
Preference number: 1 (lower is better)
Translates to: GWPESRDWYKTQRHW*VAKVWFPNAFCKKV
Trigger: GACTTTCTTACAAAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTACCAGTCCCTGCTCTCAGGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp GCAGGGTGGCCTGAGAGCAGGGACTGGTACAAAACCCAGAGACATTaGTGGGTAGCAAAGGTCTGGTTTCCAAATGCATTTTGTAAGAAA +
Preference number: 1 (lower is better)
Translates to: AGWPESRDWYKTQRH*WVAKVWFPNAFCKK
Trigger: TTTCTTACAAAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTACCAGTCCCTGCTCTCAGGCCACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 90 bp AGGGACTGGTACAAAACCCAGAGACATTGGTGGGTAGCAAAGGTCTaGTTTCCAAATGCATTTTGTAAGAAAGTCAGTCTGTTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: RDWYKTQRHWWVAKV*FPNAFCKKVSLFRK
Trigger: TTTTCTAAACAGACTGACTTTCTTACAAAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTACCAGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGGCCATGGGCCACGGCTaGACCACGGGCCACGGCTGC +
Preference number: 2 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPAMGHG*TTGHGC
Trigger: GCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGC...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCAACTCTGGAAGAGGACTaGTCCGCCCAGCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWATLEED*SAQLST
Trigger: CGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGT...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGGGACACACACACGGGTaGACGGAGCGAGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVGHTHG*TERGSH
Trigger: GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCC...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCAGGAGCGGCCGGGCTaGGCCATGGGCAGAACAGGA +
Preference number: 2 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRQERPG*AMGRTG
Trigger: TCCTGTTCTGCCCATGGCCCAGCCCGGCCGCTCCTG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATTCCAGCAGGGGAGGTaGCTTCGCTGCTGTCACTTG +
Preference number: 2 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWAFQQGR*LRCCHL
Trigger: CAAGTGACAGCAGCGAAGGCACCTCCCCTGCTGGAA...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CAA 90 bp GACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACACTaGAGAGCTCTCTCGCCTGGGCAGCTGCACCCAGCTGGAGCCCGG +
Preference number: 2 (lower is better)
Translates to: DAAVRSPSSPPAPTH*RALSPGQLHPAGAR
Trigger: CCGGGCTCCAGCTGGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGCCGGGCTGGGCCATaGGCAGAACAGGACGGGCAG +
Preference number: 2 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGRAGP*AEQDGQ
Trigger: CTGCCCGTCCTGTTCTGCCCATGGCCCAGCCCGGCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR TCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGGCAGGGCTCACCGCTaGGGGGCCAGCGCTTGGCCC +
Preference number: 2 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSGRAHR*GASAWP
Trigger: GGGCCAAGCGCTGGCCCCTCAGCGGTGAGCCCTGCC...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR-3UTR CCA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCGCCGGCTCCCTGGGCTaGGTCTGGCGGTTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVAGSLG*VWRFPR
Trigger: TCTGGGGAACCGCCAGACCCAGCCCAGGGAGCCGGC...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp GCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGAGCGGGAGCCAACTCTaGAAGAGGACTGCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: AGARDPDAKALAAALRSKSGSQL*KRTAPP
Trigger: GGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCT...CTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR TCA 90 bp CGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCTGTCAACAGCCATCTaGGCTGGGGGAGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: RRYPPPTRLFGHPVPLLLLSTAI*AGGGCA
Trigger: GGCACAGCCTCCCCCAGCTCAGATGGCTGTTGACAG...GAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR GCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCCATGGGCCACGGCTaGACCACGGGCCACGGCTGC +
Preference number: 2 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSAMGHG*TTGHGC
Trigger: GCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGC...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGCACAGCACCGCAGTaGTGGCCTGTGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGTAPQ*WPVPEE
Trigger: CTCCTCTGGCACAGGCCACCACTGCGGTGCTGTGCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR TCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGGCTCCAGCCGGGCTaGCCGGGTGTCTGTAAAACT +
Preference number: 2 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGLQPG*PGVCKT
Trigger: AGTTTTACAGACACCCGGTCAGCCCGGCTGGAGCCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACTGGCAGGGCTCTCTGTaGACCTGGATTCTACAGGCT +
Preference number: 2 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHWQGSL*TWILQA
Trigger: AGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCA...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp GTAGGATCTCGGTCATCTGAACCCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCGGCTGGGCATGGAGATaGCTTCACCTGGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: VGSRSSEPRRAEAGGPPAGWAWR*LHLAAA
Trigger: GGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCC...GGCGGGTGGACCTCCAGCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR TCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAGGCCACACGGAGTaGGCCGGCCAGATGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSAGHTE*AGQMEQ
Trigger: CTGCTCCATCTGGCCGGCTCACTCCGTGTGGCCTGC...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTGCTGGGGTCGCACCTaGTTAGCCCGCAGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQCWGRT*LARRAG
Trigger: ACCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCA...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGGGACACACACACGGGTaGACGGAGCGAGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQGHTHG*TERGSH
Trigger: GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCC...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR-3UTR TCA 90 bp AGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACCAGCTCTCCACGCCATaGGAGGTGTCGATCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SPGPGRQSSGRSTEVKANQLSTP*EVSIWD
Trigger: ATCCCAGATCGACACCTCTCATGGCGTGGAGAGCTG...GTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR GCA 90 bp TCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTAGAAACCCACCCTCATaGCAGCGGGAGCCAACTCTG +
Preference number: 2 (lower is better)
Translates to: SPQISPSDAAVRSPSSPPRNPPS*QREPTL
Trigger: CAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCT...AGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp GGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCGGCAAGTCCATCCAGGCCTaGGCTGGAAGAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: GPGRQSSGRSTEVKANAGKSIQA*AGRRLL
Trigger: GAGGAGTCTTCTTCCAGCCCAGGCCTGGATGGACTT...GCCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGCGAGAAGACAGGCCGTaGCAACGGTCCCGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSREDRP*QRSRGC
Trigger: ACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCG...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCGGCACAGCACCGCAGTaGTGGCCTGTGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLGTAPQ*WPVPEE
Trigger: CTCCTCTGGCACAGGCCACCACTGCGGTGCTGTGCC...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR TCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGAGCTGGTGCTCTACCTaGCAATGTGGGGAAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQSWCST*QCGEKP
Trigger: AGGCTTTTCCCCACATTGTCAGGTAGAGCACCAGCT...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp TATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACTTCGCTGCTGTCACTTaGTTCACAGAGCTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: YPPPTRLFGHPVPLLLPHFAAVT*FTELLS
Trigger: GCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAA...GTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAGGGCAGAGCCCGGGGTaGACGTGGCAGCCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: HTLQSANCEQEQEICHAAGQSPG*TWQPKA
Trigger: AGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCC...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAGCCCTGGCCCCGCAGTaGAGACCCACCGGACACACA +
Preference number: 2 (lower is better)
Translates to: HAANTWGGQWDTVGFREEALAPQ*RPTGHT
Trigger: TGTGTGTCCGGTGGGTCTCCACTGCGGGGCCAGGGC...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGACAGAGCTCCTTAGCTaGCCTCAGGGTAAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: QRHPQFCPKPLPAGEVPSTELLS*PQGKAV
Trigger: GACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGT...CGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR TCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACTTTCCACGCAGCCCTaGAGCTCAGCACTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: HAANTWGGQWDTVGFREELSTQP*SSALRG
Trigger: CCCCCGGAGTGCTGAGCTTCAGGGCTGCGTGGAAAG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAAGGGGACTTAGGACCGTaGTCTCCCTTCACTCAAACC +
Preference number: 2 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKGDLGP*SPFTQT
Trigger: GGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCC...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAGGACACACACACGGGTaGACGGAGCGAGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: HTLQSANCEQEQEICHAAGHTHG*TERGSH
Trigger: GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCC...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGCTCCTGCGCTGTACCTaGAGTCCTCCATGTACTCCT +
Preference number: 2 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSLLRCT*SPPCTP
Trigger: AGGAGTACATGGAGGACTCCAGGTACAGCGCAGGAG...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTGGCAGGGCTCTCTGTaGACCTGGATTCTACAGGCT +
Preference number: 2 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLWQGSL*TWILQA
Trigger: AGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGACTACTTAAAAATTTaGTTACCCACGCGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQDYLKI*LPTRGG
Trigger: ACCTCCCCGCGTGGGTAACCAAATTTTTAAGTAGTC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR TCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAGGAATGTCCTCATGGTaGGTGCTGTCAGAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: HAANTWGGQWDTVGFREEGMSSW*VLSEAG
Trigger: GCCTGCCTCTGACAGCACTCACCATGAGGACATTCC...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAGGCTCTCCGAGGAAGTaGACACGACTGAGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEGSPRK*TRLSRG
Trigger: GCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCC...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAGTGTCCAAGCCAGGCTaGCCATCACAGGGGCCACTC +
Preference number: 2 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEVSKPG*PSQGPL
Trigger: GAGTGGCCCCTGTGATGGCCAGCCTGGCTTGGACAC...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAACTCAAACCCACCCTGTaGCCTCCCCCAACTCACTTC +
Preference number: 2 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKELKPTL*PPPTHF
Trigger: GAAGTGAGTTGGGGGAGGGCACAGGGTGGGTTTGAG...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAGGGGACTTAGGACCGTaGTCTCCCTTCACTCAAACC +
Preference number: 2 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEGDLGP*SPFTQT
Trigger: GGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCC...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAGTGTCTGTAAAACTCTaGACCTGCTCAGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEVSVKL*TCSGQG
Trigger: CCCCTGGCCTGAGCAGGTGCAGAGTTTTACAGACAC...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAGCCCTGGCCCCGCAGTaGAGACCCACCGGACACACA +
Preference number: 2 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRALAPQ*RPTGHT
Trigger: TGTGTGTCCGGTGGGTCTCCACTGCGGGGCCAGGGC...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR GCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAGCTGGAGGGCTCCGCTaGAGCTCCCTGGTAGCCATG +
Preference number: 2 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRAGGLR*SSLVAM
Trigger: CATGGCTACCAGGGAGCTGCAGCGGAGCCCTCCAGC...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp CCAGGAGGGGTCAGCAGGAGCGGCCGGGCTGGGCCATaGGCAGAACAGGACGGGCAGAGCCCGGGGTGGACG +
Preference number: 3 (lower is better)
Translates to: PGGVSRSGRAGP*AEQDGQSPGWT
Trigger: CGTCCACCCCGGGCTCTGCCCGTCCTGTTCTGCCCATGGCCCAGCCCGGCCGCTCCTGCTGACCCCTCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp GCCGCGAGAGGGGTGAGCGTGGCCCTGGCCCCGCAGTaGAGACCCACCGGACACACACACGGGTGGACGGAG +
Preference number: 3 (lower is better)
Translates to: AARGVSVALAPQ*RPTGHTHGWTE
Trigger: CTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGGGGCCAGGGCCACGCTCACCCCTCTCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp CACCCGCCCCAGCTGCCCACCGGCTGGGCATGGAGATaGCTTCACCTGGCAGCAGCCGGCAGAGGACTCGAG +
Preference number: 3 (lower is better)
Translates to: HPPQLPTGWAWR*LHLAAAGRGLE
Trigger: CTCGAGTCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 72 bp CCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTaGCCACCGGCTGGGCATGGAGATGCCTTCACCTGG +
Preference number: 3 (lower is better)
Translates to: PSGRSWRSTRPS*PPAGHGDAFTW
Trigger: CCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp AGCGCCCAAGGAGCTCCAGGCGAGGCCAAGCCGTCCTaGCACTGGCTGCCCCCAGGGCTGGGCAAGTCCATC +
Preference number: 3 (lower is better)
Translates to: SAQGAPGEAKPS*HWLPPGLGKSI
Trigger: GATGGACTTGCCCAGCCCTGGGGGCAGCCAGTGCCAGGACGGCTTGGCCTCGCCTGGAGCTCCTTGGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp GAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATaGAGATGCCTTCACCTGGCAGCAGCCGGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: EVHPPQLPTGWA*RCLHLAAAGRG
Trigger: TCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp CTCCGCTGCAGCTCCCTGGTAGCCATGCTCTCCCCCTaGGGGACTCGTGCCAGAGCCACCCACCTTGCTCGG +
Preference number: 3 (lower is better)
Translates to: LRCSSLVAMLSP*GTRARATHLAR
Trigger: CCGAGCAAGGTGGGTGGCTCTGGCACGAGTCCCCCAGGGGGAGAGCATGGCTACCAGGGAGCTGCAGCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACACTGAGCCGAGGCCCTaGCAGAGGGAACCTGGTGTG +
Preference number: 3 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHTEPRP*QREPGV
Trigger: CACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGT...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp CCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTaGGGTCAAAGCAAACGCCGGCTCCAGCGCACAGAC +
Preference number: 3 (lower is better)
Translates to: PGTRTPKLWPQH*GQSKRRLQRTD
Trigger: GTCTGTGCGCTGGAGCCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp ACCCGGCCACAGGCCCATCACGTGTCCAAGCCAGGCTaGCCATCACAGGGGCCACTCACACACCCGCACCAC +
Preference number: 3 (lower is better)
Translates to: TRPQAHHVSKPG*PSQGPLTHPHH
Trigger: GTGGTGCGGGTGTGTGAGTGGCCCCTGTGATGGCCAGCCTGGCTTGGACACGTGATGGGCCTGTGGCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp AGGGCTCTCTGTGCACCTGGATTCTACAGGCTGCCATaGGCCACGGCTGCACCACGGGCCACGGCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: RALCAPGFYRLP*ATAAPRATAAA
Trigger: GGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCAGCCTGTAGAATCCAGGTGCACAGAGAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp TGGGCAGAACAGGACGGGCAGAGCCCGGGGTGGACGTaGCAGCCCAAGGCTCTCCGAGGAAGTGCACACGAC +
Preference number: 3 (lower is better)
Translates to: WAEQDGQSPGWT*QPKALRGSAHD
Trigger: GTCGTGTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGTCCTGTTCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp GGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTaGACACGACTGAGCCGAGGCCCTTGCAGAGGGAAC +
Preference number: 3 (lower is better)
Translates to: GVDVAAQGSPRK*TRLSRGPCRGN
Trigger: GTTCCCTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGCCCAGAGCACCCCTCTaGCTGGGGTCGCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQPRAPL*LGSHLL
Trigger: AAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGG...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp TGGCAGCCCAAGGCTCTCCGAGGAAGTGCACACGACTaGGCCGAGGCCCTTGCAGAGGGAACCTGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: WQPKALRGSAHD*AEALAEGTWCG
Trigger: GCCACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCCTTGGGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGGGGTCTGCAGCTGTGTaGTGTGTTAAGCACCAAAGC +
Preference number: 3 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPGSAAV*CVKHQS
Trigger: GCTTTGGTGCTTAACACACAACACAGCTGCAGACCC...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp CACACACCCGCACCACCTGCTGGGGACTTAGGACCGTaGTCTCCCTTCACTCAAACCCACCCTGTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: HTPAPPAGDLGP*SPFTQTHPVPS
Trigger: GGAGGGCACAGGGTGGGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp TCTCCGAGGAAGTGCACACGACTGAGCCGAGGCCCTTaGAGAGGGAACCTGGTGTGGCCTGAAGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SPRKCTRLSRGP*RGNLVWPEVVG
Trigger: CCCCACCACTTCAGGCCACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp TGGACAGGCCACAGGCCCTGCAGAAACCCACCCTCATaGCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCC +
Preference number: 3 (lower is better)
Translates to: WTGHRPCRNPPS*QREPTLEEDCS
Trigger: GGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCTGCAGGGCCTGTGGCCTGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp GCTGTCAGAGGCAGGCCTGAACGAGAAGACAGGCCGTaGCAACGGTCCCGAGGCTGTGAGTCTAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: AVRGRPEREDRP*QRSRGCESRQP
Trigger: AGGCTGCCTAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGCCTCTGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp GCAGAAACCCACCCTCATGCCAGCGGGAGCCAACTCTaGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCAT +
Preference number: 3 (lower is better)
Translates to: AETHPHASGSQL*KRTAPPSSPRH
Trigger: ATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp CCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTaGACAGGCCACAGGCCCTGCAGAAACCCACCCTCA +
Preference number: 3 (lower is better)
Translates to: PGLGWKKTPQAS*TGHRPCRNPPS
Trigger: TGAGGGTGGGTTTCTGCAGGGCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CAA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACCCAGAGCACCCCTCTaGCTGGGGTCGCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKPRAPL*LGSHLL
Trigger: AAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp CCCACACATTGGCAATCCCGTAGGATCTCGGTCATCTaGACCCCGTCGGGCAGAAGCTGGAGGTCCACCCGC +
Preference number: 3 (lower is better)
Translates to: PTHWQSRRISVI*TPSGRSWRSTR
Trigger: GCGGGTGGACCTCCAGCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCTACGGGATTGCCAATGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 72 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTaGTGGGGTCGCACCTGCTTAGCCCGCAGGGCTGGT +
Preference number: 3 (lower is better)
Translates to: QLTSCLVPEHPS*WGRTCLARRAG
Trigger: ACCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp CTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTaGGGTCGCACCTGCTTAGCCCGCAGGGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LTSCLVPEHPSC*GRTCLARRAGF
Trigger: GAAACCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp GAATGTCCTCATGGTGAGTGCTGTCAGAGGCAGGCCTaGACGAGAAGACAGGCCGTGGCAACGGTCCCGAGG +
Preference number: 3 (lower is better)
Translates to: ECPHGECCQRQA*TRRQAVATVPR
Trigger: CCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGCCTCTGACAGCACTCACCATGAGGACATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp CAGCACCGCAGTGGTGGCCTGTGCCAGAGGAGGGGGTaGAGGATGGAATGTCCTCATGGTGAGTGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: QHRSGGLCQRRG*RMECPHGECCQ
Trigger: CTGACAGCACTCACCATGAGGACATTCCATCCTTCACCCCCTCCTCTGGCACAGGCCACCACTGCGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp CTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: LSPALRSPQPPS*GVCVMTAPARA
Trigger: TGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR CCA 72 bp CATCACAGGGGCCACTCACACACCCGCACCACCTGCTaGGGACTTAGGACCGTGCTCTCCCTTCACTCAAAC +
Preference number: 3 (lower is better)
Translates to: HHRGHSHTRTTC*GLRTVLSLHSN
Trigger: GTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGTGTGTGAGTGGCCCCTGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp GCAGTGGTGGCCTGTGCCAGAGGAGGGGGTGAAGGATaGAATGTCCTCATGGTGAGTGCTGTCAGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: AVVACARGGGEG*NVLMVSAVRGR
Trigger: CCTGCCTCTGACAGCACTCACCATGAGGACATTCCATCCTTCACCCCCTCCTCTGGCACAGGCCACCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGGTCTGCAGCTGTGTaGTGTGTTAAGCACCAAAGC +
Preference number: 3 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGSAAV*CVKHQS
Trigger: GCTTTGGTGCTTAACACACAACACAGCTGCAGACCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGCCTCTTTCTCCAGCTTaGAGGAGCCCACAGCCTCCG +
Preference number: 3 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSPLSPA*RSPQPP
Trigger: CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGG...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR TCA 72 bp AACCCACGGCCACAGAGAGGCAGGACGGCAGAGCCATaGTTTCCCACCGAGCGATTACGAGAACCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: NPRPQRGRTAEP*FPTERLREPLP
Trigger: GGGAAGAGGTTCTCGTAATCGCTCGGTGGGAAATCATGGCTCTGCCGTCCTGCCTCTCTGTGGCCGTGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp CGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTaGCTTCGCTGCTGTCACTTGCTTCACAGAGCTCCT +
Preference number: 3 (lower is better)
Translates to: RSSVPNHFQQGR*LRCCHLLHRAP
Trigger: AGGAGCTCTGTGAAGCAAGTGACAGCAGCGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp TTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTaGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAA +
Preference number: 3 (lower is better)
Translates to: FPSTPPEMDVLT*ASEIPHSSVGK
Trigger: TTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
3UTR TCA 72 bp CCGAGCAGCAGCGGTCAGGGAAGCTGGTGCTCTACCTaGCAATGTGGGGAAAAGCCTGGTATACAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: PSSSGQGSWCST*QCGEKPGIQAR
Trigger: TCTAGCCTGTATACCAGGCTTTTCCCCACATTGTCAGGTAGAGCACCAGCTTCCCTGACCGCTGCTGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp CTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATaGGAGGTGTCGATCTGGGATGTTGTCCAATCACTA +
Preference number: 3 (lower is better)
Translates to: LEEDCSAQLSTP*EVSIWDVVQSL
Trigger: TAGTGATTGGACAACATCCCAGATCGACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR GCA 72 bp ACTTCCAGCAGGGGAGGTGCCTTCGCTGCTGTCACTTaGTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAA +
Preference number: 3 (lower is better)
Translates to: TSSRGGAFAAVT*FTELLSWPQGK
Trigger: TTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAAGGCACCTCCCCTGCTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CCA 72 bp TTCGCTGCTGTCACTTGCTTCACAGAGCTCCTTAGCTaGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: FAAVTCFTELLS*PQGKAVSAQGA
Trigger: AGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR-3UTR CAA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACACACCGTGGGACCTTaGCTTTTCACTCAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKHTVGP*LFTQEK
Trigger: CTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR GCA 72 bp GGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTaGGAACAAGAACAGGAAATCTGCCACGCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: GPRKSHTLQSAN*EQEQEICHAAN
Trigger: GTTTGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR TCA 72 bp AGATGTGCAAAGTTGGAAGCAGTAAGCTGCGTCTTCTaGGTCAGTTCCCTACGTAGCCCTGGCAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: RCAKLEAVSCVF*VSSLRSPGSVL
Trigger: CAGGACACTGCCAGGGCTACGTAGGGAACTGACTCAGAAGACGCAGCTTACTGCTTCCAACTTTGCACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp GAACAAGAACAGGAAATCTGCCACGCAGCAAACACTTaGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAA +
Preference number: 3 (lower is better)
Translates to: EQEQEICHAANT*GGQWDTVGFRE
Trigger: TTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTGGCAGATTTCCTGTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR-3UTR CAA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGACCAGAGCCACCCACCTaGCTCGGTAAGAGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRPEPPT*LGKSGQ
Trigger: CTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTGG...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp CCTGAGAGCAGGGACTGGTACAAAACCCAGAGACATTaGTGGGTAGCAAAGGTCTGGTTTCCAAATGCATTT +
Preference number: 3 (lower is better)
Translates to: PESRDWYKTQRH*WVAKVWFPNAF
Trigger: AAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTACCAGTCCCTGCTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp GAGAGCAGGGACTGGTACAAAACCCAGAGACATTGGTaGGTAGCAAAGGTCTGGTTTCCAAATGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: ESRDWYKTQRHW*VAKVWFPNAFC
Trigger: ACAAAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTACCAGTCCCTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CCA 72 bp TACAAAACCCAGAGACATTGGTGGGTAGCAAAGGTCTaGTTTCCAAATGCATTTTGTAAGAAAGTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: YKTQRHWWVAKV*FPNAFCKKVSL
Trigger: CAGACTGACTTTCTTACAAAATGCATTTGGAAACCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATCCACCCGCCCCAGCTaGCCACCGGCTGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWASTRPS*PPAGHG
Trigger: TCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGA...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWATAVA*CRASSF
Trigger: GAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGC...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGGCCTGGAGCCATGCCTaGTGCCCACGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPAWSHA*CPRWRR
Trigger: CCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGC...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTGGACTCTGTGACCCCATaGGGCGCGGGCGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGTRTHTRVDGARQPPTLDSVTP*GAGEGG
Trigger: CCCGCCCTCGCCCGCGCCCCATGGGGTCACAGAGTC...CAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTGCCTGGAGCCATGCCTaGTGCCCACGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRAWSHA*CPRWRR
Trigger: CCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGC...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp TGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGAGATGCCTTCACCCAGGCCTCGTGGGGGTaGCCGCCAGTGGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: WRSTRPSCPPAGHGDAFTQASWG*PPVGLA
Trigger: AGCGAGCCCCACTGGCGGGCACCCCCACGAGGCCTG...GGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGGGCGTCGTCCTTCTCTaGGGTGAGGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWGVVLL*GEGRAQ
Trigger: CTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCC...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTGCGCCGCGCGCAGGTTaGCCACCGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRAPRAG*PPRWPD
Trigger: ATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGC...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTCGCTGGCGGCGGACATaGAGACGCGGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: PGHPDTHTGGRSEAATDPRWRRT*RRGCTP
Trigger: AGGTGTGCAGCCGCGTCTTCATGTCCGCCGCCAGCG...AGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCGGCAGGGCTCACCGCTaGGGGGCCAGCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTGRAHR*GASAWP
Trigger: GGGCCAAGCGCTGGCCCCTCAGCGGTGAGCCCTGCC...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGGGCCAGCACAGTCGGTaGACACACCGTGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVGQHSR*THRGAW
Trigger: CCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCC...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGGGTTGGCCACCGCGGTaGCCTGATGCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVGWPPR*PDAGRR
Trigger: ACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACC...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGGCCCTGGCCCCGCAGTaGAGACCCACCGGACACACA +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPALAPQ*RPTGHT
Trigger: TGTGTGTCCGGTGGGTCTCCACTGCGGGGCCAGGGC...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCCGCCCAGTGCCCACTaGACCCGGCCACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRPPSAH*TRPQAH
Trigger: ATGGGCCTGTGGCCGGGTCCAGTGGGCACTGGGCGG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGGGCGCAGGAGGGCCATaGGGCACAGAGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARGAGGP*GTECGQ
Trigger: CTGGCCGCACTCTGTGCCCCATGGCCCTCCTGCGCC...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGATGTCCAGGTGCGTaGCCGTGGCCTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHRCPGA*PWPAPT
Trigger: CGTCGGAGCAGGCCACGGTCACGCACCTGGACATCG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGCCATCACGGCCGAGATaGGAGCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWPSRPR*ELPCCC
Trigger: GCAGCAGCACGGAAGCTCTCATCTCGGCCGTGATGG...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCTGCTCCCTCCGTCGTaGCAGCTGGCGATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVLLPPS*QLAMAE
Trigger: CTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGCTGTTCTTACTCATaGGCGCCGCGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGRSWRSTRPSCPPAGHGCSYS*APRAGW
Trigger: CCAACCTGCGCGCGGCGCTCATGAGTAAGAACAGCC...ATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACCGCTGGCGGCGGACATaGAGACGCGGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHRWRRT*RRGCTP
Trigger: AGGTGTGCAGCCGCGTCTTCATGTCCGCCGCCAGCG...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCGCCTGGAGCCATGCCTaGTGCCCACGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTAWSHA*CPRWRR
Trigger: CCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGC...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTGCAGGCCACACGGAGTaGGCCGGCCAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRAGHTE*AGQMEQ
Trigger: CTGCTCCATCTGGCCGGCTCACTCCGTGTGGCCTGC...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCAAGGATCTCGGTCATCTaGACCCCGTCGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWARISVI*TPSGRS
Trigger: GCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCT...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCCCAGCCACGGGGAGATaGTCCTCCCAGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTPATGR*SSQPSR
Trigger: CCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGG...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACCCCCTGGGGGACTCGTaGCAGAGCCACCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHPLGDS*QSHPPC
Trigger: GCAAGGTGGGTGGCTCTGGCACGAGTCCCCCAGGGG...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGCTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVLRRDS*RWPSLR
Trigger: CCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAG...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCAGTACTGCACCGTCCTTaGCAGAAGGCAGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWAVLHRP*QKAARS
Trigger: GGAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTAC...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGGGCGTCGTCCTTCTCTaGGGTGAGGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVGVVLL*GEGRAQ
Trigger: CTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCC...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACGCGCCGCGCGCAGGTTaGCCACCGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: YPPPTRLFGHPVPLLLPHAPRAG*PPRWPD
Trigger: ATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGC...GTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTCGGTGCACACACCGTaGCGCCTGGAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTSVHTP*RLEPCL
Trigger: CAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGA...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGACAGCACCGCAGTGGTaGCCTGTGCCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVTAPQW*PVPEEG
Trigger: CCCCTCCTCTGGCACAGGCCACCACTGCGGTGCTGT...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGGCCATGCTCTCCCCCTaGGGGACTCGTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVAMLSP*GTRARA
Trigger: GGCTCTGGCACGAGTCCCCCAGGGGGAGAGCATGGC...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGGAGGCCAAGCCGTCCTaGCACTGGCTGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGARDPDAKALAAALRSKEAKPS*HWLPPG
Trigger: CCCTGGGGGCAGCCAGTGCCAGGACGGCTTGGCCTC...CTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCCCATCACGGCCGAGATaGGAGCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTPSRPR*ELPCCC
Trigger: GCAGCAGCACGGAAGCTCTCATCTCGGCCGTGATGG...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGGGGCTCCAGCCGGGCTaGCCGGGTGTCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVGLQPG*PGVCKT
Trigger: AGTTTTACAGACACCCGGTCAGCCCGGCTGGAGCCC...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCAACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PVGQKLEVHPPQLPTGWATMSVI*RKLAAD
Trigger: GTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGT...TGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCTTCGGCCCGTGGGCTaGCAGGCATCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVLRPVG*QASPAL
Trigger: GAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGACCCTCCTCCACCTGTaGATAGAGCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWTLLHL*IELGPL
Trigger: GAGAGGGCCGAGCTCTATGCACAGGTGGAGGAGGGT...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRAEAGGPPAPAAHRLGMMALKP*AVTMSR
Trigger: CCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCAT...CATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTCTTCCTTCGGCCCGTaGGCTGCCAGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTSSFGP*AARHHQ
Trigger: CTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGA...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGCAGGGCTGGTTTCCGTaGGGGGTGGGTTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARQGWFP*GVGSGG
Trigger: TCCCCCTGAACCCACCCCCCACGGAAACCAGCCCTG...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCCGCCCAGTGCCCACTaGACCCGGCCACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTPPSAH*TRPQAH
Trigger: ATGGGCCTGTGGCCGGGTCCAGTGGGCACTGGGCGG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CTCCAGCCAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCCCACGCCTCCTGAGATaGACGTGCTCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LQPGHPDTHTGGRSEAATPRLLR*TCSPGP
Trigger: AGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGG...GGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGACAGAGTGCGGCCAGTaGGAGGACGACCCACGCGAG +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVTECGQ*EDDPRE
Trigger: CTCGCGTGGGTCGTCCTCCCACTGGCCGCACTCTGT...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395104.5
CDS-3UTR CCA 90 bp CCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCCCGGCCGGGACAGCGAGTaGGCCCCTCTGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PGLGWKKTPQASWTGHRPGRDSE*APLGRY
Trigger: GTACCTGCCCAGAGGGGCCCACTCGCTGTCCCGGCC...GGGCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GCTGCACCCAGCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGGAGATGCCTTCACCTaGCAGCAGCCGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AAPSWSPGPGRQSSGRSTGDAFT*QQPAED
Trigger: GTCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTCC...AGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGCCATCACGGCCGAGATaGGAGCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARPSRPR*ELPCCC
Trigger: GCAGCAGCACGGAAGCTCTCATCTCGGCCGTGATGG...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGCTCCCTCCGTCGTaGCAGCTGGCGATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTLLPPS*QLAMAE
Trigger: CTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQATAVA*CRASSF
Trigger: GAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGC...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGTGCTCGCGCCGCGTaGACTTCTTCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTCARAA*TSSRRS
Trigger: AGATCTGCGGGAAGAAGTTCACGCGGCGCGAGCACA...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACGGAAGTGCACACGACTaGGCCGAGGCCCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHGSAHD*AEALAE
Trigger: CTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCC...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCGGCAGGGCTCACCGCTaGGGGGCCAGCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGGRAHR*GASAWP
Trigger: GGGCCAAGCGCTGGCCCCTCAGCGGTGAGCCCTGCC...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCGGCAGGGCTCACCGCTaGGGGGCCAGCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCGRAHR*GASAWP
Trigger: GGGCCAAGCGCTGGCCCCTCAGCGGTGAGCCCTGCC...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGGTGACGATGTCCAGGTaGGTGACCGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVVTMSR*VTVACS
Trigger: GGAGCAGGCCACGGTCACGCACCTGGACATCGTCAC...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCACCACCCCGCCCAGTaGCCACTGGACCCGGCCACA +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQHHPAQ*PLDPAT
Trigger: TGTGGCCGGGTCCAGTGGGCACTGGGCGGGGTGGTG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCGTCCTGGCACTGGCTaGCCCCAGGGCTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ADIPLRRGCSVTQFPSCSRPGTG*PQGWAS
Trigger: ACTTGCCCAGCCCTGGGGGCAGCCAGTGCCAGGACG...GGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCGTACTGCACCGTCCTTaGCAGAAGGCAGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTVLHRP*QKAARS
Trigger: GGAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTAC...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTGTACTGCACCGTCCTTaGCAGAAGGCAGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PGHPDTHTGGRSEAATDPVLHRP*QKAARS
Trigger: GGAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTAC...AGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp TGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGAGATGCCTTCACCTCTTCCTTCGGCCCGTaGGCTGCCAGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: WRSTRPSCPPAGHGDAFTSSFGP*AARHHQ
Trigger: CTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGA...GGTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACGGTTGGCCACCGCGGTaGCCTGATGCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: YPPPTRLFGHPVPLLLPHGWPPR*PDAGRR
Trigger: ACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACC...GTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACTTCAGGGACAGCGAGTaGGCCCCTCTGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHFRDSE*APLGRY
Trigger: GTACCTGCCCAGAGGGGCCCACTCGCTGTCCCTGAA...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACGAGCACCCCTCTTGCTaGGGTCGCACCTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHEHPSC*GRTCLA
Trigger: GGCTAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTC...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGGCAGAGCCCGGGGTaGACGTGGCAGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGQSPG*TWQPKA
Trigger: AGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGCGCAGCTGCACCCAGCTaGAGCCCGGGACCCGGACGC +
Preference number: 4 (lower is better)
Translates to: ELLSWPQGKAVSAQGAPGAAAPS*SPGPGR
Trigger: GCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAGCTGC...GCCTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp AGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACCCGTCGGGCAGAAGCTaGAGGTCCACCCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGPGRQSSGRSTEVKANPSGRS*RSTRPS
Trigger: GCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGACGG...GTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CAA 72 bp TCTCCCCCTGGGGGACTCGTGCCAGAGCCACCCACCTaGCTCGGTAAGAGTGGGCAGGGCTCACCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPPGGLVPEPPT*LGKSGQGSPLR
Trigger: CCTCAGCGGTGAGCCCTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTGGCACGAGTCCCCCAGGGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCCGTTCTTGTGCGCCTTaGAGACCTTGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTRSCAP*RPCPPR
Trigger: TCGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACG...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTCGCTCCCTCCGTACTaGGACGGTGAAACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVSLPPY*DGETCS
Trigger: AGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGA...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTCTTCCACCTGCTGTGTaGTGTGCCGGACGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGHPDTHTGGRSEAATDPLPPAV*CAGRSL
Trigger: AAGAGACCGTCCGGCACATCACACAGCAGGTGGAAG...AGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGAGCTGCTGGCTTCGGTaGCGGACAGGTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVSCWLR*RTGPHL
Trigger: CAAATGCGGACCTGTCCGTCACCGAAGCCAGCAGCT...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLATAVA*CRASSF
Trigger: GAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGC...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTGAGCGCATGTGTCGCTTaGGGATGCACTGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: QGTRTHTRVDGARQPPTLSACVA*GCTGAW
Trigger: CCATGCACCAGTGCATCCTCAAGCGACACATGCGCT...CAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCACAGACAGAGGCCGTaGGAGGACGCCGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQHRQRP*EDAGRG
Trigger: GCCCCGCCCGGCGTCCTCTCACGGCCTCTGTCTGTG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCACGCCGTGCTGCCTCTaGTCGTTGAGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTTPCCL*SLSSRS
Trigger: GCTGCGGGAGCTCAACGAGCAGAGGCAGCACGGCGT...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPTMSVI*RKLAAD
Trigger: GTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGT...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGCGAGGCCAAGCCGTCCTGGCTTCGGCCCGTGGGCTaGCAGGCATCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: QGKAVSAQGAPGEAKPSWLRPVG*QASPAL
Trigger: GAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAG...CCAGGACGGCTTGGCCTCGCCTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGTGGCGCCTGGAGCCATaGCTGATGCCCACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQWRLEP*LMPTLA
Trigger: CGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCA...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCCAGAGCACCCCTCTTaGTGGGGTCGCACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHPEHPS*WGRTCL
Trigger: TAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGCTCCTGAGATGGACGTaGTCACCTGGGCCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVLLRWT*SPGPRK
Trigger: TTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRMALKP*AVTMSR
Trigger: CCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCAT...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGGCCTTGATGAAGTCGTaGCAGGCTTGCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWALMKS*QACTMS
Trigger: GGACATCGTGCAAGCCTGCCACGACTTCATCAAGGC...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RRYPPPTRLFGHPVPLLLLRRDS*RWPSLR
Trigger: CCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAG...GAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGCGCTTGAGGATGCACTaGTGCATGGCCGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPRLRMH*CMAEKL
Trigger: CAGCTTCTCGGCCATGCACCAGTGCATCCTCAAGCG...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGGCAGAGCCCGGGGTaGACGTGGCAGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGQSPG*TWQPKA
Trigger: AGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGCCGGGCTGGGCCATaGGCAGAACAGGACGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGRAGP*AEQDGQ
Trigger: CTGCCCGTCCTGTTCTGCCCATGGCCCAGCCCGGCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGCCATGCTCTCCCCCTaGGGGACTCGTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQAMLSP*GTRARA
Trigger: GGCTCTGGCACGAGTCCCCCAGGGGGAGAGCATGGC...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHKPALP*CAEARS
Trigger: GCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTT...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARKPALP*CAEARS
Trigger: GCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTT...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGTCGCTCCCTCCGTACTaGGACGGTGAAACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARSLPPY*DGETCS
Trigger: AGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGA...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGTTGAGTCTCGGCTGCTaGACGGCCACCCCGACGTCG +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQLSLGC*TATPTS
Trigger: CGACGTCGGGGTGGCCGTTCAGCAGCCGAGACTCAA...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACGGAATGTCCTCATGGTaGGTGCTGTCAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHGMSSW*VLSEAG
Trigger: GCCTGCCTCTGACAGCACTCACCATGAGGACATTCC...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGACGCCGTGCTGCCTCTaGTCGTTGAGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQTPCCL*SLSSRS
Trigger: GCTGCGGGAGCTCAACGAGCAGAGGCAGCACGGCGT...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTACGCCGTGCTGCCTCTaGTCGTTGAGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SPQISPSDAAVRSPSSPPTPCCL*SLSSRS
Trigger: GCTGCGGGAGCTCAACGAGCAGAGGCAGCACGGCGT...AGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCCCTGCGTGACCGTGGCCTaGTCCGACGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PGLGWKKTPQASWTGHRPCVTVA*SDVFCT
Trigger: GGTGCAGAAGACGTCGGAGCAGGCCACGGTCACGCA...GGGCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVLVSAR*AEYMKS
Trigger: CGACTTCATGTACTCAGCGCACCTGGCGCTCACCAG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGAAGTCGTGGCAGGCTTaGACGATGTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVKSWQA*TMSVIC
Trigger: GCAGATGACGGACATCGTGCAAGCCTGCCACGACTT...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGGCAGGGCTCTCTGTaGACCTGGATTCTACAGGCT +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVWQGSL*TWILQA
Trigger: AGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCA...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCGGCTGGGCATGGAGATaGCTTCACCTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRYPPPTRLFGHPVPLLLGWAWR*LHLAAA
Trigger: GGCTGCTGCCAGGTGAAGGCATCTCCATGCCCAGCC...GAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPSLRKN*QDSFAV
Trigger: CACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACT...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRRDSWR*PSLRKN
Trigger: ATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAGGTTGGCCACCGCGGTaGCCTGATGCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLGWPPR*PDAGRR
Trigger: ACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACC...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGTTGGCCACCGCGGTaGCCTGATGCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGWPPR*PDAGRR
Trigger: ACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAAGCGCCGCGCGCAGGTTaGCCACCGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKAPRAG*PPRWPD
Trigger: ATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGC...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTASGPL*AGTRTA
Trigger: TGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGC...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCTTCAGGGACAGCGAGTaGGCCCCTCTGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTFRDSE*APLGRY
Trigger: GTACCTGCCCAGAGGGGCCCACTCGCTGTCCCTGAA...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGTGGACCAGCGTGTaGCGCTTCATGTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTLWTSV*RFMCSR
Trigger: GCGCGAGCACATGAAGCGCCACACGCTGGTCCACAG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGACACACACACGGGTaGACGGAGCGAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQGHTHG*TERGSH
Trigger: GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCC...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCACCCGCACCACCTGCTaGGGACTTAGGACCGTGCTC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTTRTTC*GLRTVL
Trigger: GAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGT...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCTTGCAGAGGGAACCTaGTGTGGCCTGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRLAEGT*CGLKWW
Trigger: CCACCACTTCAGGCCACACCAGGTTCCCTCTGCAAG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAAGGCGGGCCTGGGTCCTaGGCAGGGTGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKGGPGS*AGWPES
Trigger: GCTCTCAGGCCACCCTGCCCAGGACCCAGGCCCGCC...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTTGACAGAAAAATCGTaGTGTCCCTGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVLTEKS*CPCPLP
Trigger: GGGGAGGGGGCAGGGACACCACGATTTTTCTGTCAA...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCGGGGGTGCCCGCCAGTaGGGCTCGCTTTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVGGARQ*GSLLAD
Trigger: GTCAGCCAAAAGCGAGCCCCACTGGCGGGCACCCCC...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TCCAGCGCACAGACCAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGCCGGCTCCCTGGGCTaGGTCTGGCGGTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSAQTRGTRSSVPNHFQQAGSLG*VWRFPR
Trigger: TCTGGGGAACCGCCAGACCCAGCCCAGGGAGCCGGC...CTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTGGTCTGTGCGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CTGCACCCAGCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAAGTCCATCCAGGCCTaGGCTGGAAGAAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: LHPAGARDPDAKALAAALKSIQA*AGRRLL
Trigger: GAGGAGTCTTCTTCCAGCCCAGGCCTGGATGGACTT...CAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACCAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGATGTCCAGGTGCGTaGCCGTGGCCTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: TRGTRSSVPNHFQQGRCLRCPGA*PWPAPT
Trigger: CGTCGGAGCAGGCCACGGTCACGCACCTGGACATCG...AAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGGAGCGCCAGGTGCGCTaGGTACATGAAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARERQVR*VHEVDD
Trigger: ATCATCGACTTCATGTACTCAGCGCACCTGGCGCTC...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCTGCTCCCTCCGTCGTaGCAGCTGGCGATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQLLPPS*QLAMAE
Trigger: CTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GTCGGGCAGAAGCTGGAGGTCCACCCGCCCCAGCTGCCCACCGGCTGGGCATGGTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: VGQKLEVHPPQLPTGWAWSVLRR*NLLFLD
Trigger: ATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGA...CCATGCCCAGCCGGTGGGCAGCTGGGGCGGGTGGACCTCCAGCTTCTGCCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSATAVA*CRASSF
Trigger: GAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGC...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGAAGTGCACACGACTaGGCCGAGGCCCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGSAHD*AEALAE
Trigger: CTCTGCAAGGGCCTCGGCTCAGTCGTGTGCACTTCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGCTGGGCAGGGTGGCCTaGGAGCAGGGACTGGTACAA +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQLGRVA*EQGLVQ
Trigger: TTGTACCAGTCCCTGCTCTCAGGCCACCCTGCCCAG...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCCCAGCCACGGGGAGATaGTCCTCCCAGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVPATGR*SSQPSR
Trigger: CCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGG...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCGGCCCGTGGGCTaGCAGGCATCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTLRPVG*QASPAL
Trigger: GAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAG...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCTGTCATCTTCCACCTaGTGTGTGATGTGCCGGACG +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHLSSST*CVMCRT
Trigger: CGTCCGGCACATCACACAGCAGGTGGAAGATGACAG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGGATTCTACAGGCTaGCATGGGCCACGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTLDSTG*HGPRLH
Trigger: GTGCAGCCGTGGCCCATGGCAGCCTGTAGAATCCAG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGAAAAGCCGTGACTCCTaGGCTGTACCTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVKSRDS*AVPGVL
Trigger: GAGGACTCCAGGTACAGCGCAGGAGTCACGGCTTTT...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGCTGGAGGGCTCCGCTaGAGCTCCCTGGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTAGGLR*SSLVAM
Trigger: CATGGCTACCAGGGAGCTGCAGCGGAGCCCTCCAGC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCACAGGCCACAGGCCCTaGAGAAACCCACCCTCATGC +
Preference number: 4 (lower is better)
Translates to: LSADIPLRRGCSVTQFPSTGHRP*RNPPSC
Trigger: GCATGAGGGTGGGTTTCTGCAGGGCCTGTGGCCTGT...GGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACGCCTTGATGAAGTCGTaGCAGGCTTGCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHALMKS*QACTMS
Trigger: GGACATCGTGCAAGCCTGCCACGACTTCATCAAGGC...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: AGARDPDAKALAAALRSKRDSWR*PSLRKN
Trigger: ATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACG...CTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTTCGGTGCACACACCGTaGCGCCTGGAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTSVHTP*RLEPCL
Trigger: CAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGA...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGACACACACACGGGTaGACGGAGCGAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGHTHG*TERGSH
Trigger: GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTGGCCGGGCTGGGCCATaGGCAGAACAGGACGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASGRAGP*AEQDGQ
Trigger: CTGCCCGTCCTGTTCTGCCCATGGCCCAGCCCGGCC...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCGGAGGGGGTGAAGGATaGAATGTCCTCATGGTGAGT +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTGGGEG*NVLMVS
Trigger: ACTCACCATGAGGACATTCCATCCTTCACCCCCTCC...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCTCCTGCGCTGTACCTaGAGTCCTCCATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHLLRCT*SPPCTP
Trigger: AGGAGTACATGGAGGACTCCAGGTACAGCGCAGGAG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGCCACGCCTCCTGAGATaGACGTGCTCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQPRLLR*TCSPGP
Trigger: AGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGG...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCGGCTTCCCTGGGCTGGGTCTaGCGGTTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DPDAKALAAALRSKQTPASLGWV*RFPRAH
Trigger: ATGAGCTCTGGGGAACCGCCAGACCCAGCCCAGGGA...AGCCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
3UTR CAA 72 bp CCAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTaGCTGGGGTCGCACCTGCTTAGCCCGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTHFMSGPRAPL*LGSHLLSPQGW
Trigger: CCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CAA 72 bp GTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACACTaGAGAGCTCTCTCGCCTGGGCAGCTGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VRSPSSPPAPTH*RALSPGQLHPA
Trigger: AGCTGGGTGCAGCTGCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAGGAGGGGAACTGGGTGACCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCGATGTCCAGGTGCGTaGCCGTGGCCTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWARCPGA*PWPAPT
Trigger: CGTCGGAGCAGGCCACGGTCACGCACCTGGACATCG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCAGGAAGCTGGCGGCTaGCATCACCTCGATGACGTT +
Preference number: 4 (lower is better)
Translates to: PQISPSDAAVRSPSSPPAQEAGG*HHLDDV
Trigger: AACGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTG...AGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTTCGCTCCCTCCGTACTaGGACGGTGAAACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PQISPSDAAVRSPSSPPASLPPY*DGETCS
Trigger: AGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGA...AGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACCAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTTTGAGTCTCGGCTGCTaGACGGCCACCCCGACGTCG +
Preference number: 4 (lower is better)
Translates to: TRGTRSSVPNHFQQGRCLLSLGC*TATPTS
Trigger: CGACGTCGGGGTGGCCGTTCAGCAGCCGAGACTCAA...AAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGAGCTGCTGGCTTCGGTaGCGGACAGGTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQSCWLR*RTGPHL
Trigger: CAAATGCGGACCTGTCCGTCACCGAAGCCAGCAGCT...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCGGCTAGCTGCTGGCTTCGGTaGCGGACAGGTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: DPDAKALAAALRSKQTPASCWLR*RTGPHL
Trigger: CAAATGCGGACCTGTCCGTCACCGAAGCCAGCAGCT...AGCCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGCTGTTCTTACTCATaGGCGCCGCGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGCSYS*APRAGW
Trigger: CCAACCTGCGCGCGGCGCTCATGAGTAAGAACAGCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTAGCTGGTGCTCTACCTaGCAATGTGGGGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRSWCST*QCGEKP
Trigger: AGGCTTTTCCCCACATTGTCAGGTAGAGCACCAGCT...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAGCAGGCCACACGGAGTaGGCCGGCCAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEAGHTE*AGQMEQ
Trigger: CTGCTCCATCTGGCCGGCTCACTCCGTGTGGCCTGC...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ATCCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCCTGTCAACAGCCATCTaGGCTGGGGGAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IQAWAGRRLLRHPGQATGLSTAI*AGGGCA
Trigger: GGCACAGCCTCCCCCAGCTCAGATGGCTGTTGACAG...GCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp GGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCGGCCAGCTCTCCACGCCATaGGAGGTGTCGATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GPGRQSSGRSTEVKANAGQLSTP*EVSIWD
Trigger: ATCCCAGATCGACACCTCTCATGGCGTGGAGAGCTG...GCCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp AAACCCACCCTCATGCCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCCGCCCACTCTGGCCGCAGCACTaGGGTCAAAGCAAACGCCGG +
Preference number: 4 (lower is better)
Translates to: KPTLMPAGANSGRGLLRPLWPQH*GQSKRR
Trigger: CCGGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAG...TGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCCTGCTCCCACACACTTaGGAGCTCTCTCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVLLPHT*ELSRLG
Trigger: GCCCAGGCGAGAGAGCTCTCAAGTGTGTGGGAGCAG...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGCTGTGACGATGTCCAGGTaGGTGACCGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EAPAVLSQTTSSRGGAFAVTMSR*VTVACS
Trigger: GGAGCAGGCCACGGTCACGCACCTGGACATCGTCAC...AGCGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTLVSAR*AEYMKS
Trigger: CGACTTCATGTACTCAGCGCACCTGGCGCTCACCAG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAGAGCTTCCGTGCTGCTaGTGGACGAGGCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLELPCC*WTRRRS
Trigger: AGATCGGCGCCTCGTCCAGCAGCAGCACGGAAGCTC...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTGCACCCAGCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGACCTGCTGTGTGATGTaGCGGACGGTCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LHPAGARDPDAKALAAALTCCVM*RTVSLF
Trigger: AAACAAAGAGACCGTCCGGCACATCACACAGCAGGT...CAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGCTGGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGACCCTCCTCCACCTGTaGATAGAGCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQTLLHL*IELGPL
Trigger: GAGAGGGCCGAGCTCTATGCACAGGTGGAGGAGGGT...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCGCGGCTGCACACCTTaGACACATACTTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRRGCTP*THTSCP
Trigger: AGGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAATGGCGCCTGGAGCCATaGCTGATGCCCACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEWRLEP*LMPTLA
Trigger: CGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCA...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCATGGCGCCTGGAGCCATaGCTGATGCCCACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSWRLEP*LMPTLA
Trigger: CGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCA...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGCTCTCCGAGGAAGTaGACACGACTGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGSPRK*TRLSRG
Trigger: GCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCCCCTGGGGGACTCGTaGCAGAGCCACCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAPLGDS*QSHPPC
Trigger: GCAAGGTGGGTGGCTCTGGCACGAGTCCCCCAGGGG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAAACGCCGGCTCCAGCGCACAGACCAGAGGCACCCGCAGTTCTGTCCCAAACACTCTGGAAGAGGACTaGTCCGCCCAGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ANAGSSAQTRGTRSSVPNTLEED*SAQLST
Trigger: CGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGT...GTTTGGGACAGAACTGCGGGTGCCTCTGGTCTGTGCGCTGGAGCCGGCGTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGACTCTGTGACCCCATaGGGCGCGGGCGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSDSVTP*GAGEGG
Trigger: CCCGCCCTCGCCCGCGCCCCATGGGGTCACAGAGTC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000302995.2
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVFRLFI*KPWCRL
Trigger: GAGGCGACACCAGGGCTTCCAAATGAACAACCGAAA...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGCAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQQGHRP*APDPLS
Trigger: GGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTG...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGCGCCGCGCGCAGGTTaGCCACCGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSAPRAG*PPRWPD
Trigger: ATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGCTGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: EAPAVLSQTTSSRGGAFAASGPL*AGTRTA
Trigger: TGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGC...AGCGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTTTCAGGGACAGCGAGTaGGCCCCTCTGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTFRDSE*APLGRY
Trigger: GTACCTGCCCAGAGGGGCCCACTCGCTGTCCCTGAA...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCGCTTGAGGATGCACTaGTGCATGGCCGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTRLRMH*CMAEKL
Trigger: CAGCTTCTCGGCCATGCACCAGTGCATCCTCAAGCG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAAGCCCGGGGTGGACGTaGCAGCCCAAGGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSSPGWT*QPKALR
Trigger: TCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCT...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCAGGAGCGGCCGGGCTaGGCCATGGGCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASQERPG*AMGRTG
Trigger: TCCTGTTCTGCCCATGGCCCAGCCCGGCCGCTCCTG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGCCACAGCACACACCGTaGGACCTTTGCTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARPQHTP*DLCFSL
Trigger: GAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGG...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGCAGCTGCCCACCGGCTaGGCATGGAGATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QRHPQFCPKPLPAGEVPSQLPTG*AWRCLH
Trigger: GTGAAGGCATCTCCATGCCCAGCCGGTGGGCAGCTG...CGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp TCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTCGTTCTTGTGCGCCTTaGAGACCTTGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SPQISPSDAAVRSPSSPPRSCAP*RPCPPR
Trigger: TCGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACG...AGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CTCATGCCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACCTTCCACCTGCTGTGTaGTGTGCCGGACGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LMPAGANSGRGLLRPALHLPPAV*CAGRSL
Trigger: AAGAGACCGTCCGGCACATCACACAGCAGGTGGAAG...GTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTAGCTGCTGGCTTCGGTaGCGGACAGGTCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTSCWLR*RTGPHL
Trigger: CAAATGCGGACCTGTCCGTCACCGAAGCCAGCAGCT...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGGGCTGTTCTTACTCATaGGCGCCGCGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQGCSYS*APRAGW
Trigger: CCAACCTGCGCGCGGCGCTCATGAGTAAGAACAGCC...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACGCCCACCTCCCATCTaGAGGCACAGCACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKRPPPI*RHSTAV
Trigger: CACTGCGGTGCTGTGCCTTCAGATGGGAGGTGGGCG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCTTTCCACGCAGCCCTaGAGCTCAGCACTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASLSTQP*SSALRG
Trigger: CCCCCGGAGTGCTGAGCTTCAGGGCTGCGTGGAAAG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTPQPPS*GVCVMT
Trigger: TGTCATCACACACACCCCTCAGCTCGGAGGCTGTGG...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCCTGGGCAGGGTGGCCTaGGAGCAGGGACTGGTACAA +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCLGRVA*EQGLVQ
Trigger: TTGTACCAGTCCCTGCTCTCAGGCCACCCTGCCCAG...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTCAGGATCCAGAGCTTaGCAGAAAAATCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTSGSRA*QKNRGV
Trigger: GACACCACGATTTTTCTGTCAAGCTCTGGATCCTGA...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGTCGCACAGGACGCCGTaGTGCCTCTGCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: QSSLAGLRVKLSAPKELQSHRTP*CLCSLS
Trigger: GCTCAACGAGCAGAGGCAGCACGGCGTCCTGTGCGA...CTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCAGCAGGACGTTCTTGTaGGCCTTGAAGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGPGRQSSGRSTEVKANASRTFL*ALKTLP
Trigger: GGGCAAGGTCTTCAAGGCGCACAAGAACGTCCTGCT...GGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQLVSAR*AEYMKS
Trigger: CGACTTCATGTACTCAGCGCACCTGGCGCTCACCAG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCATGCCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LMPAGANSGRGLLRPALHLVSAR*AEYMKS
Trigger: CGACTTCATGTACTCAGCGCACCTGGCGCTCACCAG...GTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCAAGTCGTGGCAGGCTTaGACGATGTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTKSWQA*TMSVIC
Trigger: GCAGATGACGGACATCGTGCAAGCCTGCCACGACTT...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGAGCTTCCGTGCTGCTaGTGGACGAGGCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: QSSLAGLRVKLSAPKELQELPCC*WTRRRS
Trigger: AGATCGGCGCCTCGTCCAGCAGCAGCACGGAAGCTC...CTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCCAGCCACGGGGAGATaGTCCTCCCAGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAPATGR*SSQPSR
Trigger: CCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQRTRSP*QPRGDA
Trigger: AGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCT...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCRTRSP*QPRGDA
Trigger: AGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCT...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTGAAAGAGTTCTGTACTaGACCGTCCTTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRERVLY*TVLGRR
Trigger: CCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTC...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGACCTGCTGTGTGATGTaGCGGACGGTCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVTCCVM*RTVSLF
Trigger: AAACAAAGAGACCGTCCGGCACATCACACAGCAGGT...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCGGCCAGCACAGTCGGTaGACACACCGTGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGGQHSR*THRGAW
Trigger: CCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCC...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTACCAGAGCACCCCTCTTaGTGGGGTCGCACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLPEHPS*WGRTCL
Trigger: TAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGG...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGCAAGAACAGGAAATCTaGCACGCAGCAAACACTTGG +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVQEQEI*HAANTW
Trigger: CCAAGTGTTTGCTGCGTGGCAGATTTCCTGTTCTTG...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GTAGGATCTCGGTCATCTGAACCCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCAGAAACCCACCCTCATaGCAGCGGGAGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: VGSRSSEPRRAEAGGPPARNPPS*QREPTL
Trigger: CAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTTCT...GGCGGGTGGACCTCCAGCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGTCTCGCCTGGGCAGCTaGACCCAGCTGGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSLASQSSLAGLRVKLSASRLGS*TQLEPG
Trigger: CCCGGGCTCCAGCTGGGTGCAGCTGCCCAGGCGAGA...CGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVFIWKP*CRLFYR
Trigger: TCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAA...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: LRRYPPPTRLFGHPVPLLSLRKN*QDSFAV
Trigger: CACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACT...CAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCASGPL*AGTRTA
Trigger: TGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGC...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCGAGCACCCCTCTTGCTaGGGTCGCACCTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGEHPSC*GRTCLA
Trigger: GGCTAAGCAGGTGCGACCCCAGCAAGAGGGGTGCTC...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCGTGTCCAAGCCAGGCTaGCCATCACAGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGVSKPG*PSQGPL
Trigger: GAGTGGCCCCTGTGATGGCCAGCCTGGCTTGGACAC...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTTCTACAGGCTGCCATaGGCCACGGCTGCACCACGG +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQFYRLP*ATAAPR
Trigger: CCGTGGTGCAGCCGTGGCCCATGGCAGCCTGTAGAA...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCGAGAAGACAGGCCGTaGCAACGGTCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQREDRP*QRSRGC
Trigger: ACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TCCAGCGCACAGACCAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGCCCACCGGCTGGGCATaGAGATGCCTTCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSAQTRGTRSSVPNHFQQPTGWA*RCLHLA
Trigger: TGCCAGGTGAAGGCATCTCCATGCCCAGCCGGTGGG...CTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTGGTCTGTGCGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GTAGGATCTCGGTCATCTGAACCCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCCCCGTCCCCACACATTaGCAATCCCGTAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: VGSRSSEPRRAEAGGPPAPVPTH*QSRRIS
Trigger: CGAGATCCTACGGGATTGCCAATGTGTGGGGACGGG...GGCGGGTGGACCTCCAGCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCGTTCTTGTGCGCCTTaGAGACCTTGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTRSCAP*RPCPPR
Trigger: TCGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACG...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGGGCAGTAGAGCGTCTTaGAGTAGCGGCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQGSRAS*SSGCCP
Trigger: TGGGCAGCAGCCGCTACTTCAAGACGCTCTACTGCC...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGCGATGTCCAGGTGCGTaGCCGTGGCCTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRRCPGA*PWPAPT
Trigger: CGTCGGAGCAGGCCACGGTCACGCACCTGGACATCG...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCCACCTGCTGTGTaGTGTGCCGGACGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTLPPAV*CAGRSL
Trigger: AAGAGACCGTCCGGCACATCACACAGCAGGTGGAAG...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCGCTGGCGGCGGACATaGAGACGCGGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGRWRRT*RRGCTP
Trigger: AGGTGTGCAGCCGCGTCTTCATGTCCGCCGCCAGCG...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTGGGCTCCAGCCGGGCTaGCCGGGTGTCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASGLQPG*PGVCKT
Trigger: AGTTTTACAGACACCCGGTCAGCCCGGCTGGAGCCC...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQPQPPS*GVCVMT
Trigger: TGTCATCACACACACCCCTCAGCTCGGAGGCTGTGG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGTCCCTCCACGCCTCCTaGGATGGACGTGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSSLHAS*DGRAHL
Trigger: CAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGA...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGAGGACGGCAGAGCCATaGTTTCCCACCGAGCGATTA +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQRTAEP*FPTERL
Trigger: TAATCGCTCGGTGGGAAATCATGGCTCTGCCGTCCT...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGAGCAGGACGTTCTTGTaGGCCTTGAAGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQSRTFL*ALKTLP
Trigger: GGGCAAGGTCTTCAAGGCGCACAAGAACGTCCTGCT...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTGCGTGACCGTGGCCTaGTCCGACGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWACVTVA*SDVFCT
Trigger: GGTGCAGAAGACGTCGGAGCAGGCCACGGTCACGCA...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAAGTGACGATGTCCAGGTaGGTGACCGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKVTMSR*VTVACS
Trigger: GGAGCAGGCCACGGTCACGCACCTGGACATCGTCAC...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSRTRSP*QPRGDA
Trigger: AGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCT...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHASPAL*SEKEFC
Trigger: ACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGC...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCTTCGGCCCGTGGGCTaGCAGGCATCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLLRPVG*QASPAL
Trigger: GAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAG...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGGGGACTTAGGACCGTaGTCTCCCTTCACTCAAACC +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQGDLGP*SPFTQT
Trigger: GGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGTGTCTGTAAAACTCTaGACCTGCTCAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQVSVKL*TCSGQG
Trigger: CCCCTGGCCTGAGCAGGTGCAGAGTTTTACAGACAC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAGCCATGGGCCACGGCTaGACCACGGGCCACGGCTGC +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEAMGHG*TTGHGC
Trigger: GCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGC...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCGGCTCTCCGAGGAAGTaGACACGACTGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAGSPRK*TRLSRG
Trigger: GCCTCGGCTCAGTCGTGTGCACTTCCTCGGAGAGCC...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp AAACCCACCCTCATGCCAGCGGGAGCCAACTCTGGAAGAGGACTGCTCCGCCCATTCCAGCAGGGGAGGTaGCTTCGCTGCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: KPTLMPAGANSGRGLLRPFQQGR*LRCCHL
Trigger: CAAGTGACAGCAGCGAAGGCACCTCCCCTGCTGGAA...TGGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCTGGCATGAGGGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCTTCCTTCGGCCCGTaGGCTGCCAGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWASSFGP*AARHHQ
Trigger: CTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGA...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGGCGTCGTCCTTCTCTaGGGTGAGGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSGVVLL*GEGRAQ
Trigger: CTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGGGCGTCGTCCTTCTCTaGGGTGAGGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRGVVLL*GEGRAQ
Trigger: CTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCC...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGCTGTGGACCAGCGTGTaGCGCTTCATGTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSLWTSV*RFMCSR
Trigger: GCGCGAGCACATGAAGCGCCACACGCTGGTCCACAG...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTGGGAACAGCGCCTCTaGAGAGCCCTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGWEQRL*RALAAS
Trigger: GGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCAGTGGGAACAGCGCCTCTaGAGAGCCCTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRKSHTLQSANLLGKSGQWEQRL*RALAAS
Trigger: GGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCA...CTGCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCATAGGGCCCGTCGCCTaGGAACAGCGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAIGPVA*EQRLWR
Trigger: TCTCCAGAGGCGCTGTTCCCAGGCGACGGGCCCTAT...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTGTCCAAGCCAGGCTaGCCATCACAGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSVSKPG*PSQGPL
Trigger: GAGTGGCCCCTGTGATGGCCAGCCTGGCTTGGACAC...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCGAGAAGACAGGCCGTaGCAACGGTCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAREDRP*QRSRGC
Trigger: ACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAATGGACGTGCTCACCTaGGCCTCGGAAATCCCACAC +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLMDVLT*ASEIPH
Trigger: GTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCAT...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCAGGAAGCTGGCGGCTaGCATCACCTCGATGACGTT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQQEAGG*HHLDDV
Trigger: AACGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCCCATCACGGCCGAGATaGGAGCTTCCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGPSRPR*ELPCCC
Trigger: GCAGCAGCACGGAAGCTCTCATCTCGGCCGTGATGG...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTASELRGVCDDSSSQGTSVLRR*NLLFLD
Trigger: ATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGA...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTGAGTCTCGGCTGCTaGACGGCCACCCCGACGTCG +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSLSLGC*TATPTS
Trigger: CGACGTCGGGGTGGCCGTTCAGCAGCCGAGACTCAA...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCGGCTGTTCTTACTCATaGGCGCCGCGCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLGCSYS*APRAGW
Trigger: CCAACCTGCGCGCGGCGCTCATGAGTAAGAACAGCC...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAATGTGCTCGCGCCGCGTaGACTTCTTCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKCARAA*TSSRRS
Trigger: AGATCTGCGGGAAGAAGTTCACGCGGCGCGAGCACA...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGCACAGCAAGAGGACTTaGGCACAAGCTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TAAPRATAAATGSDLAARHSKRT*AQAKGK
Trigger: TTTTCCTTTAGCTTGTGCTCAAGTCCTCTTGCTGTG...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACACATGTGAGTGCTTCTaGAAACACAGCAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHTCECF*KHSKRT
Trigger: AGTCCTCTTGCTGTGTTTTCAGAAGCACTCACATGT...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTGTCAGAGGCAGGCCTaGACGAGAAGACAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASCQRQA*TRRQAV
Trigger: CACGGCCTGTCTTCTCGTTCAGGCCTGCCTCTGACA...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACCACAGCCTCCGAGCTaGGGGGTGTGTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKPQPPS*GVCVMT
Trigger: TGTCATCACACACACCCCTCAGCTCGGAGGCTGTGG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCTCCCTCCACGCCTCCTaGGATGGACGTGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGSLHAS*DGRAHL
Trigger: CAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGA...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp TCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGACGCCGTGCTGCCTCTaGTCGTTGAGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGPRKSHTLQSANLLGKTPCCL*SLSSRS
Trigger: GCTGCGGGAGCTCAACGAGCAGAGGCAGCACGGCGT...CTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTCGCACAGGACGCCGTaGTGCCTCTGCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLSHRTP*CLCSLS
Trigger: GCTCAACGAGCAGAGGCAGCACGGCGTCCTGTGCGA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGATGCCTTCACCTGGCAGCAGCCGGCAGAGGACTCGAGAAATGACCACAGAAAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: EMPSPGSSRQRTREMTTERTRSP*QPRGDA
Trigger: AGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCT...TTCTGTGGTCATTTCTCGAGTCCTCTGCCGGCTGCTGCCAGGTGAAGGCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCGAAAGAGTTCTGTACTaGACCGTCCTTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ADIPLRRGCSVTQFPSCSERVLY*TVLGRR
Trigger: CCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTC...GGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCCTGTCATCTTCCACCTaGTGTGTGATGTGCCGGACG +
Preference number: 4 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVLSSST*CVMCRT
Trigger: CGTCCGGCACATCACACAGCAGGTGGAAGATGACAG...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTATTGAGGATGCACTGGTaGATGGCCGAGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLLRMHW*MAEKLQ
Trigger: CTGCAGCTTCTCGGCCATGCACCAGTGCATCCTCAA...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCATACTTCTTGTCCTTaGTGTGGACCAGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQHTSCP*CGPACG
Trigger: GCCACACGCTGGTCCACAGCAAGGACAAGAAGTATG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAGTGTCTGTAAAACTCTaGACCTGCTCAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLVSVKL*TCSGQG
Trigger: CCCCTGGCCTGAGCAGGTGCAGAGTTTTACAGACAC...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTCTTCAGTCGGCAAACTaGGAACAAGAACAGGAAATC +
Preference number: 4 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRLQSAN*EQEQEI
Trigger: GATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAG...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGCGAGGGGCTTCTGTTCTaGCATCAGCGACCCTCACAA +
Preference number: 4 (lower is better)
Translates to: ELLSWPQGKAVSAQGAPGEGLLF*HQRPSQ
Trigger: TTGTGAGGGTCGCTGATGGCAGAACAGAAGCCCCTC...GCCTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CTCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTTCGCTGCTGTCACTTaGTTCACAGAGCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LSADIPLRRGCSVTQFPSFAAVT*FTELLS
Trigger: GCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAA...GGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLSLRKN*QDSFAV
Trigger: CACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACT...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQRDSWR*PSLRKN
Trigger: ATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSLRRDS*RWPSLR
Trigger: CCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCCTGTGGACCAGCGTGTaGCGCTTCATGTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGLWTSV*RFMCSR
Trigger: GCGCGAGCACATGAAGCGCCACACGCTGGTCCACAG...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTGGGAACAGCGCCTCTaGAGAGCCCTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPWEQRL*RALAAS
Trigger: GGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCTTGCAGAGGGAACCTaGTGTGGCCTGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQLAEGT*CGLKWW
Trigger: CCACCACTTCAGGCCACACCAGGTTCCCTCTGCAAG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACGACTACTTAAAAATTTaGTTACCCACGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHDYLKI*LPTRGG
Trigger: ACCTCCCCGCGTGGGTAACCAAATTTTTAAGTAGTC...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTATTGACAGAAAAATCGTaGTGTCCCTGCCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLLTEKS*CPCPLP
Trigger: GGGGAGGGGGCAGGGACACCACGATTTTTCTGTCAA...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
3UTR CAA 72 bp CACAGAAAGGAAACGCACAGGCGCCTAGGCAGAAACTaGGAGACTCACCGCAGAGGCCACGTGAACCCACGG +
Preference number: 4 (lower is better)
Translates to: HRKETHRRLGRN*ETHRRGHVNPR
Trigger: CCGTGGGTTCACGTGGCCTCTGCGGTGAGTCTCCAAGTTTCTGCCTAGGCGCCTGTGCGTTTCCTTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCGTTCTTGTGCGCCTTaGAGACCTTGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASRSCAP*RPCPPR
Trigger: TCGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGAGCGCCAGGTGCGCTaGGTACATGAAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: QSSLAGLRVKLSAPKELQERQVR*VHEVDD
Trigger: ATCATCGACTTCATGTACTCAGCGCACCTGGCGCTC...CTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCACAGGAAGCTGGCGGCTaGCATCACCTCGATGACGTT +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSQEAGG*HHLDDV
Trigger: AACGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTG...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GTAGGATCTCGGTCATCTGAACCCCGTCGGGCAGAAGCTGGAGGTCCACCCGCCACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: VGSRSSEPRRAEAGGPPATSTLL*ERVLYC
Trigger: GCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGT...GGCGGGTGGACCTCCAGCTTCTGCCCGACGGGGTTCAGATGACCGAGATCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCTTCCACCTGCTGTGTaGTGTGCCGGACGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASLPPAV*CAGRSL
Trigger: AAGAGACCGTCCGGCACATCACACAGCAGGTGGAAG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTTGAGTCTCGGCTGCTaGACGGCCACCCCGACGTCG +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPLSLGC*TATPTS
Trigger: CGACGTCGGGGTGGCCGTTCAGCAGCCGAGACTCAA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTAGCGCATGTGTCGCTTaGGGATGCACTGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASSACVA*GCTGAW
Trigger: CCATGCACCAGTGCATCCTCAAGCGACACATGCGCT...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTTGTGCTCGCGCCGCGTaGACTTCTTCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: CSPGPRKSHTLQSANLLGCARAA*TSSRRS
Trigger: AGATCTGCGGGAAGAAGTTCACGCGGCGCGAGCACA...ACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGGAATGTCCTCATGGTaGGTGCTGTCAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSGMSSW*VLSEAG
Trigger: GCCTGCCTCTGACAGCACTCACCATGAGGACATTCC...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCGCCCACCTCCCATCTaGAGGCACAGCACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPRPPPI*RHSTAV
Trigger: CACTGCGGTGCTGTGCCTTCAGATGGGAGGTGGGCG...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCTTTCCACGCAGCCCTaGAGCTCAGCACTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPLSTQP*SSALRG
Trigger: CCCCCGGAGTGCTGAGCTTCAGGGCTGCGTGGAAAG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp TCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGTCGCACAGGACGCCGTaGTGCCTCTGCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SPGPRKSHTLQSANLLGKSHRTP*CLCSLS
Trigger: GCTCAACGAGCAGAGGCAGCACGGCGTCCTGTGCGA...CTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASTMSVI*RKLAAD
Trigger: GTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGT...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGGAGCTTCCGTGCTGCTaGTGGACGAGGCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGELPCC*WTRRRS
Trigger: AGATCGGCGCCTCGTCCAGCAGCAGCACGGAAGCTC...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGGAGCTTCCGTGCTGCTaGTGGACGAGGCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: SPGPRKSHTLQSANLLGKELPCC*WTRRRS
Trigger: AGATCGGCGCCTCGTCCAGCAGCAGCACGGAAGCTC...CTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGAAAGAGTTCTGTACTaGACCGTCCTTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQERVLY*TVLGRR
Trigger: CCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCTTGAGGATGCACTGGTaGATGGCCGAGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCLRMHW*MAEKLQ
Trigger: CTGCAGCTTCTCGGCCATGCACCAGTGCATCCTCAA...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCGTGTGGCGCTTCATGTaGTCGCGCCGCGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGVWRFM*SRRVNF
Trigger: GAAGTTCACGCGGCGCGAGCACATGAAGCGCCACAC...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCGTGTGGCGCTTCATGTaGTCGCGCCGCGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLVWRFM*SRRVNF
Trigger: GAAGTTCACGCGGCGCGAGCACATGAAGCGCCACAC...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAGGCCAGCACAGTCGGTaGACACACCGTGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAGQHSR*THRGAW
Trigger: CCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCC...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCGGGGACTTAGGACCGTaGTCTCCCTTCACTCAAACC +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCGDLGP*SPFTQT
Trigger: GGTTTGAGTGAAGGGAGAGCACGGTCCTAAGTCCCC...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCTCCTGAGATGGACGTaGTCACCTGGGCCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWALLRWT*SPGPRK
Trigger: TTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAACGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASERDSWR*PSLRKN
Trigger: ATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACG...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAGGATGCACTGGTGCATaGCCGAGAAGCTGCAGTACG +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEGCTGA*PRSCST
Trigger: CGTACTGCAGCTTCTCGGCCATGCACCAGTGCATCC...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGATAGGGCCCGTCGCCTaGGAACAGCGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGIGPVA*EQRLWR
Trigger: TCTCCAGAGGCGCTGTTCCCAGGCGACGGGCCCTAT...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCAGGGCTGGTTTCCGTaGGGGGTGGGTTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPQGWFP*GVGSGG
Trigger: TCCCCCTGAACCCACCCCCCACGGAAACCAGCCCTG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGAACTCACTTCATGTCTaGTCCCAGAGCACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQNSLHV*SQSTPL
Trigger: AAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTT...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACAGGAGCGGCCGGGCTaGGCCATGGGCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAQERPG*AMGRTG
Trigger: TCCTGTTCTGCCCATGGCCCAGCCCGGCCGCTCCTG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGGGCACAGCACCGCAGTaGTGGCCTGTGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPGTAPQ*WPVPEE
Trigger: CTCCTCTGGCACAGGCCACCACTGCGGTGCTGTGCC...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGATGGACGTGCTCACCTaGGCCTCGGAAATCCCACAC +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSMDVLT*ASEIPH
Trigger: GTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCAT...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCCACGCCTCCTGAGATaGACGTGCTCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSPRLLR*TCSPGP
Trigger: AGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CCTTCGCTGCTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGAGCGGGAGCCAACTCTaGAAGAGGACTGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PSLLSLASQSSLAGLRVKSGSQL*KRTAPP
Trigger: GGGCGGAGCAGTCCTCTTCCAGAGTTGGCTCCCGCT...CTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp ATCCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCACAGAGCTCCTTAGCTaGCCTCAGGGTAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IQAWAGRRLLRHPGQATGTELLS*PQGKAV
Trigger: GACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGT...GCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTGAGCGCCAGGTGCGCTaGGTACATGAAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASERQVR*VHEVDD
Trigger: ATCATCGACTTCATGTACTCAGCGCACCTGGCGCTC...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCCAGGAAGCTGGCGGCTaGCATCACCTCGATGACGTT +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGQEAGG*HHLDDV
Trigger: AACGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTG...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp TGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTCTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: CSPGPRKSHTLQSANLLGLRKLI*GVRLDA
Trigger: AGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAG...ACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTGTCAGAGGCAGGCCTaGACGAGAAGACAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGCQRQA*TRRQAV
Trigger: CACGGCCTGTCTTCTCGTTCAGGCCTGCCTCTGACA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTCCCTCCACGCCTCCTaGGATGGACGTGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPSLHAS*DGRAHL
Trigger: CAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCACAGGACGCCGTGCTaGCTCTGCTCGTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPHRTPC*LCSLSS
Trigger: GGAGCTCAACGAGCAGAGGCAGCACGGCGTCCTGTG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGGTGACGATGTCCAGGTaGGTGACCGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPVTMSR*VTVACS
Trigger: GGAGCAGGCCACGGTCACGCACCTGGACATCGTCAC...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp ACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCAGGGCTCACCGCTGAGGAAGTCGTGGCAGGCTTaGACGATGTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: TLQSANLLGKSGQGSPLRKSWQA*TMSVIC
Trigger: GCAGATGACGGACATCGTGCAAGCCTGCCACGACTT...CCTCAGCGGTGAGCCCTGCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACCAGCCACGGGGAGATaGTCCTCCCAGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAPATGR*SSQPSR
Trigger: CCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCACCCTCCTCCACCTGTaGATAGAGCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSTLLHL*IELGPL
Trigger: GAGAGGGCCGAGCTCTATGCACAGGTGGAGGAGGGT...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCATTGAGGATGCACTGGTaGATGGCCGAGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSLRMHW*MAEKLQ
Trigger: CTGCAGCTTCTCGGCCATGCACCAGTGCATCCTCAA...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGTGTGGCGCTTCATGTaGTCGCGCCGCGTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSVWRFM*SRRVNF
Trigger: GAAGTTCACGCGGCGCGAGCACATGAAGCGCCACAC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCCGCGGCTGCACACCTTaGACACATACTTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCRGCTP*THTSCP
Trigger: AGGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCG...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAATGCTGGGGTCGCACCTaGTTAGCCCGCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREECWGRT*LARRAG
Trigger: ACCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCA...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCATGCTGGGGTCGCACCTaGTTAGCCCGCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAACWGRT*LARRAG
Trigger: ACCAGCCCTGCGGGCTAAGCAGGTGCGACCCCAGCA...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGTGGCAGGGCTCTCTGTaGACCTGGATTCTACAGGCT +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSWQGSL*TWILQA
Trigger: AGCCTGTAGAATCCAGGTGCACAGAGAGCCCTGCCA...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCAGAGCCACCCACCTTaGTCGGTAAGAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGQSHPP*SVRVGR
Trigger: CCTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTG...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRMALKP*AVTMSR
Trigger: CCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCAT...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCGCCTTGATGAAGTCGTaGCAGGCTTGCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAALMKS*QACTMS
Trigger: GGACATCGTGCAAGCCTGCCACGACTTCATCAAGGC...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSQGHRP*APDPLS
Trigger: GGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGTTCTACAGGCTGCCATaGGCCACGGCTGCACCACGG +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPFYRLP*ATAAPR
Trigger: CCGTGGTGCAGCCGTGGCCCATGGCAGCCTGTAGAA...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCTCCTGCGCTGTACCTaGAGTCCTCCATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASLLRCT*SPPCTP
Trigger: AGGAGTACATGGAGGACTCCAGGTACAGCGCAGGAG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCACGCAGCAAACACTTaGGGAGGTCAGTGGGACACT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASHAANT*GGQWDT
Trigger: AGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCATGGACGTGCTCACCTaGGCCTCGGAAATCCCACAC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLMDVLT*ASEIPH
Trigger: GTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCAT...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp GATCTGGGATGTTGTCCAATCACTACTAAGACAGCCTGTCAACAGCCATCTGAGCTGCTCCCTCCGTCGTaGCAGCTGGCGATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: DLGCCPITTKTACQQPSELLPPS*QLAMAE
Trigger: CTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAG...CTCAGATGGCTGTTGACAGGCTGTCTTAGTAGTGATTGGACAACATCCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCAGAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PRKSHTLQSANLLGKSGQKPALP*CAEARS
Trigger: GCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTT...CTGCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp CCCAGCTCTCCACGCCATGAGAGGTGTCGATCTGGGATGTTGTCCAATCACTACAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PSSPRHERCRSGMLSNHYKPALP*CAEARS
Trigger: GCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTT...GTAGTGATTGGACAACATCCCAGATCGACACCTCTCATGGCGTGGAGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGSVLRR*NLLFLD
Trigger: ATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGA...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAATCGCACAGGACGCCGTaGTGCCTCTGCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREESHRTP*CLCSLS
Trigger: GCTCAACGAGCAGAGGCAGCACGGCGTCCTGTGCGA...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCATGCGTGACCGTGGCCTaGTCCGACGTCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAACVTVA*SDVFCT
Trigger: GGTGCAGAAGACGTCGGAGCAGGCCACGGTCACGCA...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRTMSVI*RKLAAD
Trigger: GTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGT...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CAACTCACTTCATGTCTGGTCCCAGAGCACCCCTCTTGCTGGGGTCGCACCTGCACCTGCTGTGTGATGTaGCGGACGGTCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLTSCLVPEHPSCWGRTCTCCVM*RTVSLF
Trigger: AAACAAAGAGACCGTCCGGCACATCACACAGCAGGT...GCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCGCGGCTGCACACCTTaGACACATACTTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLARLLSPHSVCRKILASRGCTP*THTSCP
Trigger: AGGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGCTCAAACCCACCCTGTaGCCTCCCCCAACTCACTTC +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRLKPTL*PPPTHF
Trigger: GAAGTGAGTTGGGGGAGGGCACAGGGTGGGTTTGAG...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCCCCACACTCCGTGTaGAGAAAAATCTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQSPHSV*RKILAS
Trigger: AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGA...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCAGAGCCACCCACCTTaGTCGGTAAGAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPQSHPP*SVRVGR
Trigger: CCTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCTTCAGTCGGCAAACTaGGAACAAGAACAGGAAATC +
Preference number: 4 (lower is better)
Translates to: EEPTASELRGVCDDSSSQLQSAN*EQEQEI
Trigger: GATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCGCCTTGATGAAGTCGTaGCAGGCTTGCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGALMKS*QACTMS
Trigger: GGACATCGTGCAAGCCTGCCACGACTTCATCAAGGC...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp GGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGAGTGGGCAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GLGNPTLFSRQTCSVRVGSLRKN*QDSFAV
Trigger: CACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACT...GCCCACTCTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp TTCGCTGCTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTCAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FAAVTCFTELLSWPQGKAQGHRP*APDPLS
Trigger: GGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTG...AGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAATCTTCCTTCGGCCCGTaGGCTGCCAGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREESSFGP*AARHHQ
Trigger: CTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGA...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEASGPL*AGTRTA
Trigger: TGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGC...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGGGATGCACTGGTGCATaGCCGAGAAGCTGCAGTACG +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGGCTGA*PRSCST
Trigger: CGTACTGCAGCTTCTCGGCCATGCACCAGTGCATCC...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTTCTTGTCCTTGCTGTaGACCAGCGTGTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLFLSLL*TSVWRF
Trigger: GAAGCGCCACACGCTGGTCCACAGCAAGGACAAGAA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAATAGGGCCCGTCGCCTaGGAACAGCGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEIGPVA*EQRLWR
Trigger: TCTCCAGAGGCGCTGTTCCCAGGCGACGGGCCCTAT...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGCTGTATTTCCCACTTTaGTGTTGTAAACACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPLYFPL*CCKHQN
Trigger: ATTTTGGTGTTTACAACACCAAAGTGGGAAATACAG...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TTCGCTGCTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTCTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: FAAVTCFTELLSWPQGKALRKLI*GVRLDA
Trigger: AGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAG...AGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAGCAGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR TCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTCGCTCCCTCCGTACTaGGACGGTGAAACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPSLPPY*DGETCS
Trigger: AGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTACATGTGAGTGCTTCTaGAAACACAGCAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTTCECF*KHSKRT
Trigger: AGTCCTCTTGCTGTGTTTTCAGAAGCACTCACATGT...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCTCAGGATCCAGAGCTTaGCAGAAAAATCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGSGSRA*QKNRGV
Trigger: GACACCACGATTTTTCTGTCAAGCTCTGGATCCTGA...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCAGCAGGACGTTCTTGTaGGCCTTGAAGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSSRTFL*ALKTLP
Trigger: GGGCAAGGTCTTCAAGGCGCACAAGAACGTCCTGCT...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGAAGTCGTGGCAGGCTTaGACGATGTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LSLASQSSLAGLRVKLSAKSWQA*TMSVIC
Trigger: GCAGATGACGGACATCGTGCAAGCCTGCCACGACTT...CGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGCCCAAGGAGCTCCAGGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QSSLAGLRVKLSAPKELQASPAL*SEKEFC
Trigger: ACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGC...CTGGAGCTCCTTGGGCGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCTGTCATCTTCCACCTaGTGTGTGATGTGCCGGACG +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSLSSST*CVMCRT
Trigger: CGTCCGGCACATCACACAGCAGGTGGAAGATGACAG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCATACTTCTTGTCCTTaGTGTGGACCAGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLHTSCP*CGPACG
Trigger: GCCACACGCTGGTCCACAGCAAGGACAAGAAGTATG...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACTGGATTCTACAGGCTaGCATGGGCCACGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAALDSTG*HGPRLH
Trigger: GTGCAGCCGTGGCCCATGGCAGCCTGTAGAATCCAG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCATCCCCACACTCCGTGTaGAGAAAAATCTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSSPHSV*RKILAS
Trigger: AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGA...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEMALKP*AVTMSR
Trigger: CCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCAT...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAACTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKELRRDS*RWPSLR
Trigger: CCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAG...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEQGHRP*APDPLS
Trigger: GGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGGGATGCACTGGTGCATaGCCGAGAAGCTGCAGTACG +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPGCTGA*PRSCST
Trigger: CGTACTGCAGCTTCTCGGCCATGCACCAGTGCATCC...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTTCTTGTCCTTGCTGTaGACCAGCGTGTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGFLSLL*TSVWRF
Trigger: GAAGCGCCACACGCTGGTCCACAGCAAGGACAAGAA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAATCGGTGCACACACCGTaGCGCCTGGAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKESVHTP*RLEPCL
Trigger: CAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGA...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREELRKLI*GVRLDA
Trigger: AGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLSVLRR*NLLFLD
Trigger: ATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGGTAAGCTGCGTCTTCTaGGTCAGTTCCCTACGTAGC +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRVSCVF*VSSLRS
Trigger: GCTACGTAGGGAACTGACTCAGAAGACGCAGCTTAC...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp GCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAGAAAGAGTTCTGTACTaGACCGTCCTTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AHLGLGNPTLFSRQTCSVERVLY*TVLGRR
Trigger: CCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTC...TACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCATACTTCTTGTCCTTaGTGTGGACCAGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSHTSCP*CGPACG
Trigger: GCCACACGCTGGTCCACAGCAAGGACAAGAAGTATG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACTCAAACCCACCCTGTaGCCTCCCCCAACTCACTTC +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAALKPTL*PPPTHF
Trigger: GAAGTGAGTTGGGGGAGGGCACAGGGTGGGTTTGAG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACTCCTGAGATGGACGTaGTCACCTGGGCCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAALLRWT*SPGPRK
Trigger: TTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAATTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEFIWKP*CRLFYR
Trigger: TCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAA...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp GCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTATTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: AHLGLGNPTLFSRQTCSVFRLFI*KPWCRL
Trigger: GAGGCGACACCAGGGCTTCCAAATGAACAACCGAAA...TACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTTCTTGTCCTTGCTGTaGACCAGCGTGTGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPFLSLL*TSVWRF
Trigger: GAAGCGCCACACGCTGGTCCACAGCAAGGACAAGAA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGGACTACTTAAAAATTTaGTTACCCACGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQDYLKI*LPTRGG
Trigger: ACCTCCCCGCGTGGGTAACCAAATTTTTAAGTAGTC...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTACCTGACAATGTaGGGAAAAGCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGLYLTM*GKAWYT
Trigger: TGTATACCAGGCTTTTCCCCACATTGTCAGGTAGAG...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAAAAACCCAGAGACATTaGTGGGTAGCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSKTQRH*WVAKVW
Trigger: CCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTT...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAGAGCGCCAGGTGCGCTaGGTACATGAAGTCGATGAT +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAERQVR*VHEVDD
Trigger: ATCATCGACTTCATGTACTCAGCGCACCTGGCGCTC...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: SPGPRKSHTLQSANLLGKTSTLL*ERVLYC
Trigger: GCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGT...CTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR TCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGTSTLL*ERVLYC
Trigger: GCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGT...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR TCA 90 bp CTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGCACAGCAAGAGGACTTaGGCACAAGCTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLRWTCSPGPRKSHTLQSHSKRT*AQAKGK
Trigger: TTTTCCTTTAGCTTGTGCTCAAGTCCTCTTGCTGTG...CGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTGTAAGCTGCGTCTTCTaGGTCAGTTCCCTACGTAGC +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPVSCVF*VSSLRS
Trigger: GCTACGTAGGGAACTGACTCAGAAGACGCAGCTTAC...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAAGGACGGCAGAGCCATaGTTTCCCACCGAGCGATTA +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAARTAEP*FPTERL
Trigger: TAATCGCTCGGTGGGAAATCATGGCTCTGCCGTCCT...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACTGTCATCTTCCACCTaGTGTGTGATGTGCCGGACG +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAALSSST*CVMCRT
Trigger: CGTCCGGCACATCACACAGCAGGTGGAAGATGACAG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAACACCGTGGGACCTTTaGTTTTCACTCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: MSFPSTPPEMDVLTWASETPWDL*FSLRKR
Trigger: TCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGT...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGTCCCCACACTCCGTGTaGAGAAAAATCTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRSPHSV*RKILAS
Trigger: AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGA...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CTGTCACTTGCTTCACAGAGCTCCTTAGCTGGCCTCAGGGTAAAGCTGTCAGCGTTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLASQSSLAGLRVKLSAFRLFI*KPWCRL
Trigger: GAGGCGACACCAGGGCTTCCAAATGAACAACCGAAA...CGCTGACAGCTTTACCCTGAGGCCAGCTAAGGAGCTCTGTGAAGCAAGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAGTACTGCACCGTCCTTaGCAGAAGGCAGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEVLHRP*QKAARS
Trigger: GGAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTAC...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCAAAACCCAGAGACATTaGTGGGTAGCAAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLKTQRH*WVAKVW
Trigger: CCAGACCTTTGCTACCCACCAATGTCTCTGGGTTTT...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAGGCGGGCCTGGGTCCTaGGCAGGGTGGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRGGPGS*AGWPES
Trigger: GCTCTCAGGCCACCCTGCCCAGGACCCAGGCCCGCC...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACACGCAGCAAACACTTaGGGAGGTCAGTGGGACACT +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEHAANT*GGQWDT
Trigger: AGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAACTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCT +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKELRKLI*GVRLDA
Trigger: AGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAG...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAAGCGCATGTGTCGCTTaGGGATGCACTGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKESACVA*GCTGAW
Trigger: CCATGCACCAGTGCATCCTCAAGCGACACATGCGCT...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRASPAL*SEKEFC
Trigger: ACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGC...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RLLSPHSVCRKILASFSSASPAL*SEKEFC
Trigger: ACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGACACCACCCCGCCCAGTaGCCACTGGACCCGGCCACA +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRHHPAQ*PLDPAT
Trigger: TGTGGCCGGGTCCAGTGGGCACTGGGCGGGGTGGTG...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGFIWKP*CRLFYR
Trigger: TCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CCA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACCACAGCACACACCGTaGGACCTTTGCTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: HAANTWGGQWDTVGFREEPQHTP*DLCFSL
Trigger: GAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCTCTACCTGACAATGTaGGGAAAAGCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLLYLTM*GKAWYT
Trigger: TGTATACCAGGCTTTTCCCCACATTGTCAGGTAGAG...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAACCTGCTGTGTGATGTaGCGGACGGTCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAATCCVM*RTVSLF
Trigger: AAACAAAGAGACCGTCCGGCACATCACACAGCAGGT...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGACACCGTGGGACCTTTaGTTTTCACTCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KILASFSSFEEPTASELRTPWDL*FSLRKR
Trigger: TCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGT...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCATTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAFRLFI*KPWCRL
Trigger: GAGGCGACACCAGGGCTTCCAAATGAACAACCGAAA...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCAAACTCACTTCATGTCTaGTCCCAGAGCACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAANSLHV*SQSTPL
Trigger: AAGAGGGGTGCTCTGGGACCAGACATGAAGTGAGTT...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAAGCCCGGGGTGGACGTaGCAGCCCAAGGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRSPGWT*QPKALR
Trigger: TCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGACCCAGAGACATTGGTaGGTAGCAAAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPTQRHW*VAKVWF
Trigger: AAACCAGACCTTTGCTACCCACCAATGTCTCTGGGT...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CACACTCTTCAGTCGGCAAACTGCGAACAAGAACAGGAAATCTGCCACGCAGCACAAGAACAGGAAATCTaGCACGCAGCAAACACTTGG +
Preference number: 4 (lower is better)
Translates to: HTLQSANCEQEQEICHAAQEQEI*HAANTW
Trigger: CCAAGTGTTTGCTGCGTGGCAGATTTCCTGTTCTTG...TGCTGCGTGGCAGATTTCCTGTTCTTGTTCGCAGTTTGCCGACTGAAGAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAACAGCACCGCAGTGGTaGCCTGTGCCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRTAPQW*PVPEEG
Trigger: CCCCTCCTCTGGCACAGGCCACCACTGCGGTGCTGT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAACCCGCACCACCTGCTaGGGACTTAGGACCGTGCTC +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRTRTTC*GLRTVL
Trigger: GAGCACGGTCCTAAGTCCCCAGCAGGTGGTGCGGGT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTTGGGTAGCAAAGGTCTaGTTTCCAAATGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPWVAKV*FPNAFC
Trigger: ACAAAATGCATTTGGAAACCAGACCTTTGCTACCCA...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGTGGGTAGCAAAGGTCTaGTTTCCAAATGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPWVAKV*FPNAFC
Trigger: ACAAAATGCATTTGGAAACCAGACCTTTGCTACCCA...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAAAAGGTACAAAGTTCTaGGAATTCTCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKEKGTKF*EFSKRP
Trigger: CGGCCTCTTTGAGAATTCTCAGAACTTTGTACCTTT...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAAGCAGGACGTTCTTGTaGGCCTTGAAGACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRSRTFL*ALKTLP
Trigger: GGGCAAGGTCTTCAAGGCGCACAAGAACGTCCTGCT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR GCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAAAAAGCCGTGACTCCTaGGCTGTACCTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRKSRDS*AVPGVL
Trigger: GAGGACTCCAGGTACAGCGCAGGAGTCACGGCTTTT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCTGTATTTCCCACTTTaGTGTTGTAAACACCAAAAT +
Preference number: 4 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPLYFPL*CCKHQN
Trigger: ATTTTGGTGTTTACAACACCAAAGTGGGAAATACAG...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR TCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRTSTLL*ERVLYC
Trigger: GCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CCA 90 bp CCCAATGGACTGTATTTCCCACTTTGGTGTTGTAAACACCAAAATACAAACAGAACCCAGAGACATTGGTaGGTAGCAAAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PNGLYFPLWCCKHQNTNRTQRHW*VAKVWF
Trigger: AAACCAGACCTTTGCTACCCACCAATGTCTCTGGGT...TCTGTTTGTATTTTGGTGTTTACAACACCAAAGTGGGAAATACAGTCCATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS GCA 90 bp GAGAGCCCTCGCCGCCTCCGCCGCCATGGTCCAGGGGCCCGGCCATaGCGCGGCCAGCACAGTCGGTGCACACACCGTGGCGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ESPRRLRRHGPGARP*RGQHSRCTHRGAWS
Trigger: GCTCCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCCGCGGCATGGCCGGGCCCCTGGACCATGGCGGCGGAGGCGGCGAGGGCTCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 90 bp CCTGGGAACAGCGCCTCTGGAGAGCCCTCGCCGCCTCCGCCGCCATaGTCCAGGGGCCCGGCCATGCCGCGGCCAGCACAGTCGGTGCAC +
Preference number: 5 (lower is better)
Translates to: PGNSASGEPSPPPPP*SRGPAMPRPAQSVH
Trigger: GTGCACCGACTGTGCTGGCCGCGGCATGGCCGGGCCCCTGGACCATGGCGGCGGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 90 bp CTCAGGGTCCTCCAGATAGGGCCCGTCGCCTGGGAACAGCGCCTCTaGAGAGCCCTCGCCGCCTCCGCCGCCATGGTCCAGGGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LRVLQIGPVAWEQRL*RALAASAAMVQGPG
Trigger: GCCGGGCCCCTGGACCATGGCGGCGGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCAGGCGACGGGCCCTATCTGGAGGACCCTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 90 bp AGGGGCCCGGCCATGCCGCGGCCAGCACAGTCGGTGCACACACCGTaGCGCCTGGAGCCATGCCTGATGCCCACGCTGGCGGCGGACATG +
Preference number: 5 (lower is better)
Translates to: RGPAMPRPAQSVHTP*RLEPCLMPTLAADM
Trigger: CATGTCCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCCGCGGCATGGCCGGGCCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS GCA 90 bp CCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTaGCGGCGGGCGGGCCTAGGAGAGCCAGGCGAAGTCCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGHTHGWTERGSHRP*RRAGLGEPGEVLVR
Trigger: CCTGACAAGGACTTCGCCTGGCTCTCCTAGGCCCGCCCGCCGGCAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS GCA 90 bp CCGCGGCCAGCACAGTCGGTGCACACACCGTGGCGCCTGGAGCCATaGCTGATGCCCACGCTGGCGGCGGACATGAAGACGCGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PRPAQSVHTPWRLEP*LMPTLAADMKTRLH
Trigger: GTGCAGCCGCGTCTTCATGTCCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCCGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS GCA 90 bp ACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTaGCGGCGGGCGGGCCTAGGAGAGCCAGGCGAAGTCCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: TGHTHGWTERGSHRP*RRAGLGEPGEVLVR
Trigger: CCTGACAAGGACTTCGCCTGGCTCTCCTAGGCCCGCCCGCCGGCAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS CCA 90 bp CGGGCGGGCCTAGGAGAGCCAGGCGAAGTCCTTGTCAGGGCCTCCTaGGGGGCTGCGCGGCCGCGGCGAGTCTTCCTCATCCTTGTCGTC +
Preference number: 5 (lower is better)
Translates to: RAGLGEPGEVLVRAS*GAARPRRVFLILVV
Trigger: GACGACAAGGATGAGGAAGACTCGCCGCGGCCGCGCAGCCCCCCAGGAGGCCCTGACAAGGACTTCGCCTGGCTCTCCTAGGCCCGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCTGAGGGGCCAGCGCTaGGCCCGGCTCCTATCCCCA +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVLRGQR*ARLLSP
Trigger: TGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 90 bp CGACCCTCACAAGGGACCCAGGCCGGGACAGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCAGGGAGCCGTCATCCCCCAGCACGT +
Preference number: 5 (lower is better)
Translates to: RPSQGTQAGTASGPL*AGTRTAGSRHPPAR
Trigger: ACGTGCTGGGGGATGACGGCTCCCTGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGCTGTCCCGGCCTGGGTCCCTTGTGAGGGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACTGCTGCCTCTGCTCGTaGAGCTCCCGCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHCCLCS*SSRSRC
Trigger: GCACCTGCTGCGGGAGCTCAACGAGCAGAGGCAGCA...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCCTGAGGGGCCAGCGCTaGGCCCGGCTCCTATCCCCA +
Preference number: 5 (lower is better)
Translates to: PTASELRGVCDDSSSQGTLRGQR*ARLLSP
Trigger: TGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAG...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGCCAGAGCCACCCACCTaGCTCGGTAAGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVPEPPT*LGKSGQ
Trigger: CTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTGG...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS TCA 90 bp TTCTTACTCATGAGCGCCGCGCGCAGGTTGGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTCTCTGGGGTGAGGGGAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FLLMSAARRLATAVA*CRASSFSGVRGGPR
Trigger: TCTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGCTCATGAGTAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000460757.1
ENST00000650966.1
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGTGCGCCTTGAAGACCTaGCCCTCCACGACCACGCAG +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVCALKT*PSTTTQ
Trigger: CTGCGTGGTCGTGGAGGGCAAGGTCTTCAAGGCGCA...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGTACTGAGCCGAGGCCCTaGCAGAGGGAACCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: AACLRDPQSQAVHHSTHRTEPRP*QREPGV
Trigger: CACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGT...ACGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGCGCCTAGGCAGAAACTaGGAGACTCACCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPRLGRN*ETHRRG
Trigger: GCCTCTGCGGTGAGTCTCCAAGTTTCTGCCTAGGCG...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTTGCTGCCTCTGCTCGTaGAGCTCCCGCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PQISPSDAAVRSPSSPPACCLCS*SSRSRC
Trigger: GCACCTGCTGCGGGAGCTCAACGAGCAGAGGCAGCA...AGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACG +
Preference number: 5 (lower is better)
Translates to: TAAPRATAAATGSDLAARKSMMA*KPWAVT
Trigger: CGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTT...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVMSSAA*MKSWQA
Trigger: AGCCTGCCACGACTTCATCAAGGCGGCGCTGGACAT...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ACGGGCAGAGCCCGGGGTGGACGTGGCAGCCCAAGGCTCTCCGAGGAAGTGCACTGTACTGCACCGTCCTaGGCAGAAGGCAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: TGRARGGRGSPRLSEEVHCTAPS*AEGSSL
Trigger: GAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACA...GTGCACTTCCTCGGAGAGCCTTGGGCTGCCACGTCCACCCCGGGCTCTGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS TCA 90 bp GTGCCAGCCACGGGGAGATGCTCCTCCCAGCCATCACGGCCGAGATaGGAGCTTCCGTGCTGCTGCTGGACGAGGCGCCGATCTCGAACT +
Preference number: 5 (lower is better)
Translates to: VPATGRCSSQPSRPR*ELPCCCWTRRRSRT
Trigger: AGTTCGAGATCGGCGCCTCGTCCAGCAGCAGCACGGAAGCTCTCATCTCGGCCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 90 bp GGCGATGGCCGAGTCTCCGGAAGAATTGGCAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCTCCTCCCAGCCATCACGGCCGAGAT +
Preference number: 5 (lower is better)
Translates to: GDGRVSGRIGRTRSP*QPRGDAPPSHHGRD
Trigger: ATCTCGGCCGTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 90 bp TCCCTCCGTCGTGACAGCTGGCGATGGCCGAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTGCCAGCCACGGGGAGATGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLRRDSWRWPSLRKN*QDSFAVPATGRCSS
Trigger: GGAGGAGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 90 bp GAGCTCGCATTCAGCCAACGACTCGGGACAGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCAGGGAGCCGTCATCCCCCAGCACGT +
Preference number: 5 (lower is better)
Translates to: ELAFSQRLGTASGPL*AGTRTAGSRHPPAR
Trigger: ACGTGCTGGGGGATGACGGCTCCCTGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGCTGTCCCGAGTCGTTGGCTGAATGCGAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460757.1
CDS-3UTR CAA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGCCCAGCAGGACGTTCTaGTGCGCCTTGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: TAAPRATAAATGSDLAARPSRTF*CALKTL
Trigger: CAAGGTCTTCAAGGCGCACAAGAACGTCCTGCTGGG...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp ACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCTGGCTGCTAGGGAAGTCGTGGCAGGCTaGCACGATGTCCGTCATCTG +
Preference number: 5 (lower is better)
Translates to: TAAPRATAAATGSDLAAREVVAG*HDVRHL
Trigger: CAGATGACGGACATCGTGCAAGCCTGCCACGACTTC...CCTAGCAGCCAGGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGGAGTCTCCGGAAGAATaGGCAGGACTCGTTCGCCGT +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVESPEE*AGLVRR
Trigger: ACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTC...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GGCAGCCTGCCTCCGGGACCCCCAAAGCCAGGCGGTGCACCACAGCACACACCGACGCGGCTGCACACCTaGCACACATACTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GSLPPGPPKPGGAPQHTPTRLHT*HTYFLS
Trigger: GGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCGT...CGGTGTGTGCTGTGGTGCACCGCCTGGCTTTGGGGGTCCCGGAGGCAGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCCCAGAGCACCCCTCTaGCTGGGGTCGCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: EEPTASELRGVCDDSSSQPRAPL*LGSHLL
Trigger: AAGCAGGTGCGACCCCAGCAAGAGGGGTGCTCTGGG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGCAAACGCCAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACG +
Preference number: 5 (lower is better)
Translates to: PGPGRQSSGRSTEVKANAKSMMA*KPWAVT
Trigger: CGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTT...GGCGTTTGCTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp GCTGGAGCCCGGGACCCGGACGCCAAAGCTCTGGCCGCAGCACTGAGGTCAAAGGAAGTCGTGGCAGGCTaGCACGATGTCCGTCATCTG +
Preference number: 5 (lower is better)
Translates to: AGARDPDAKALAAALRSKEVVAG*HDVRHL
Trigger: CAGATGACGGACATCGTGCAAGCCTGCCACGACTTC...CTTTGACCTCAGTGCTGCGGCCAGAGCTTTGGCGTCCGGGTCCCGGGCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGACATACTTCTTGTCCTaGCTGTGGACCAGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVTYFLS*LWTSVW
Trigger: CCACACGCTGGTCCACAGCAAGGACAAGAAGTATGT...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGCCATGGGCCACGGCTGCACCACGGGCCACGGCTGCAGCCACAGGCAGTGACCGGGTCTGCAGCTGTGTaGTGTGTTAAGCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: CHGPRLHHGPRLQPQAVTGSAAV*CVKHQS
Trigger: GCTTTGGTGCTTAACACACAACACAGCTGCAGACCC...GGTCACTGCCTGTGGCTGCAGCCGTGGCCCGTGGTGCAGCCGTGGCCCATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS CCA 90 bp GCCAGGTGCGCTGAGTACATGAAGTCGATGATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGGTGCGTGACCGTGGCCTGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: ARCAEYMKSMMALKP*AVTMSRCVTVACSD
Trigger: GTCGGAGCAGGCCACGGTCACGCACCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS-3UTR CAA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCTTTCGGTTGTTCATTaGGAAGCCCTGGTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHLSVVH*EALVSP
Trigger: AGGCGACACCAGGGCTTCCAAATGAACAACCGAAAG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCTTTCGGTTGTTCATTaGGAAGCCCTGGTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVLSVVH*EALVSP
Trigger: AGGCGACACCAGGGCTTCCAAATGAACAACCGAAAG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTGCTCCCACACCCCAGCAGGACGTTCTaGTGCGCCTTGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: YPPPTRLFGHPVPLLLPHPSRTF*CALKTL
Trigger: CAAGGTCTTCAAGGCGCACAAGAACGTCCTGCTGGG...GTGTGGGAGCAGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EEPTASELRGVCDDSSSQMSSAA*MKSWQA
Trigger: AGCCTGCCACGACTTCATCAAGGCGGCGCTGGACAT...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SPQISPSDAAVRSPSSPPMSSAA*MKSWQA
Trigger: AGCCTGCCACGACTTCATCAAGGCGGCGCTGGACAT...AGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp TCTCCGCAGATATCCCCCTCCGACGCGGCTGTTCGGTCACCCAGTTCCCCTCCTTCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SPQISPSDAAVRSPSSPPSEASD*MLMSSA
Trigger: GGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGA...AGGAGGGGAACTGGGTGACCGAACAGCCGCGTCGGAGGGGGATATCTGCGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp GGCTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGCTGCAGTACGGACACTaGAACTTCTTCCTGATCACC +
Preference number: 5 (lower is better)
Translates to: GSPLRGQRLARLLSPHSVLQYGH*NFFLIT
Trigger: GGTGATCAGGAAGAAGTTCAAGTGTCCGTACTGCAG...CACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAACTGAGCCGAGGCCCTaGCAGAGGGAACCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLTEPRP*QREPGV
Trigger: CACACCAGGTTCCCTCTGCAAGGGCCTCGGCTCAGT...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGCGCCTAGGCAGAAACTaGGAGACTCACCGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQRLGRN*ETHRRG
Trigger: GCCTCTGCGGTGAGTCTCCAAGTTTCTGCCTAGGCG...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS TCA 90 bp GCAGCTCGCTCCCTCCGTACTGAGACGGTGAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGCCCACGTCTCCAGGCCATAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AARSLRTETVKPALP*CAEARSPRLQAIEA
Trigger: AGCCTCTATGGCCTGGAGACGTGGGCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS TCA 90 bp ACCGTCCTTGGCAGAAGGCAGCTCGCTCCCTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGATGCGCAGAGGCCCGTAGCCCACGTC +
Preference number: 5 (lower is better)
Translates to: TVLGRRQLAPSVLRR*NLLFLDAQRPVAHV
Trigger: GACGTGGGCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGAGCTGCCTTCTGCCAAGGACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 90 bp CCACCCACACACGGCATCTGCGACATTTTTCAGGGCCTCCCACCCTaGGGCTTGCTGTCTTTCGTCCTCCTCTGTCCACTCACGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PPTHGICDIFQGLPP*GLLSFVLLCPLTPS
Trigger: GGAGGGCGTGAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGATGCCGTGTGTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS CCA 90 bp GATCCTCTTTCCCGTAGCTGCTCCCTCCGTCGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAATTGGCAGGACTCGTTCGCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: DPLSRSCSLRRDSWR*PSLRKNWQDSFAVP
Trigger: TGGCACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAGCTACGGGAAAGAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 90 bp GCTCCTGATCCTCTTTCCCGTAGCTGCTCCCTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGGAAGAATTGGCAGGACTCGTTCGCC +
Preference number: 5 (lower is better)
Translates to: APDPLSRSCSLRRDS*RWPSLRKNWQDSFA
Trigger: GGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAGCTACGGGAAAGAGGATCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS-3UTR CAA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCTGCGCCTTGAAGACCTaGCCCTCCACGACCACGCAG +
Preference number: 5 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGCALKT*PSTTTQ
Trigger: CTGCGTGGTCGTGGAGGGCAAGGTCTTCAAGGCGCA...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ACCAGAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTTGCGCCTTGAAGACCTaGCCCTCCACGACCACGCAG +
Preference number: 5 (lower is better)
Translates to: TRGTRSSVPNHFQQGRCLCALKT*PSTTTQ
Trigger: CTGCGTGGTCGTGGAGGGCAAGGTCTTCAAGGCGCA...AAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp GAGGAGCCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGCCCAGCAGGACGTTCTaGTGCGCCTTGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: EEPTASELRGVCDDSSSQPSRTF*CALKTL
Trigger: CAAGGTCTTCAAGGCGCACAAGAACGTCCTGCTGGG...CTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTTGTACTGCACCGTCCTaGGCAGAAGGCAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTCTAPS*AEGSSL
Trigger: GAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACA...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CAGGGCACCCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTGTGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QGTRTHTRVDGARQPPTLCRTVS*FFRFFL
Trigger: AAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCA...CAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGGTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGAGTCTTCCTCATCCTaGTCGTCCGCCAACAGCGCA +
Preference number: 5 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQESSSS*SSANSA
Trigger: TGCGCTGTTGGCGGACGACAAGGATGAGGAAGACTC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CTCACCGCTGAGGGGCCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCACACCGTGGGACCTTaGCTTTTCACTCAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LTAEGPALGPAPIPTLRVHTVGP*LFTQEK
Trigger: CTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTG...CACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAGCGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCCAGAGCCACCCACCTaGCTCGGTAAGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQPEPPT*LGKSGQ
Trigger: CTGCCCACTCTTACCGAGCAAGGTGGGTGGCTCTGG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACCAAAACCCAGAGACATaGGTGGGTAGCAAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHQNPET*VGSKGL
Trigger: CAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTG...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS TCA 90 bp GCTGCTGCTGGACGAGGCGCCGATCTCGAACTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCTGATGTCCAGCGCCGCCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: AAAGRGADLELRKLI*GVRLDADVQRRLDE
Trigger: TTCATCAAGGCGGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAGTTCGAGATCGGCGCCTCGTCCAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 90 bp GCGGCTGACATCACCTCGATGACGTTCCTGCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCGATGATGGCCTTGAAGCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AADITSMTFLLVSAR*AEYMKSMMALKPWA
Trigger: GGCCCAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGCGCTCACCAGCAGGAACGTCATCGAGGTGATGTCAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 90 bp CACACGGCATCTGCGACATTTTTCAGGGCCTCCCACCCTGCGGCTTaGTGTCTTTCGTCCTCCTCTGTCCACTCACGCCCTCCCACGTTC +
Preference number: 5 (lower is better)
Translates to: HTASATFFRASHPAA*CLSSSSVHSRPPTF
Trigger: GAACGTGGGAGGGCGTGAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGATGCCGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS-3UTR CAA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTGCTGCCTCTGCTCGTaGAGCTCCCGCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLCCLCS*SSRSRC
Trigger: GCACCTGCTGCGGGAGCTCAACGAGCAGAGGCAGCA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ATCCAGGCCTGGGCTGGAAGAAGACTCCTCAGGCATCCTGGACAGGCCACAGGCACGTTCTTGTGCGCCTaGAAGACCTTGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: IQAWAGRRLLRHPGQATGTFLCA*KTLPST
Trigger: CGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACGT...GCCTGTGGCCTGTCCAGGATGCCTGAGGAGTCTTCTTCCAGCCCAGGCCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp CCAGCGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PALGPAPIPTLRVQKNLGMSSAA*MKSWQA
Trigger: AGCCTGCCACGACTTCATCAAGGCGGCGCTGGACAT...GCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCCAACTCTGGAAGAGGACTGCTCCGCCCAGCTCTCCACGCCATGAGAGGTGTCGAGTCTCCGGAAGAATaGGCAGGACTCGTTCGCCGT +
Preference number: 5 (lower is better)
Translates to: ANSGRGLLRPALHAMRGVESPEE*AGLVRR
Trigger: ACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTC...GACACCTCTCATGGCGTGGAGAGCTGGGCGGAGCAGTCCTCTTCCAGAGTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp CCCACAGCCTCCGAGCTGAGGGGTGTGTGTGATGACAGCTCCAGCCAGGGCACCACATACTTCTTGTCCTaGCTGTGGACCAGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: PTASELRGVCDDSSSQGTTYFLS*LWTSVW
Trigger: CCACACGCTGGTCCACAGCAAGGACAAGAAGTATGT...GGTGCCCTGGCTGGAGCTGTCATCACACACACCCCTCAGCTCGGAGGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CCGCAGTGGAGACCCACCGGACACACACACGGGTGGACGGAGCGAGGCAGCCACGTCAGGATCCAGAGCTaGACAGAAAAATCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQWRPTGHTHGWTERGSHVRIQS*TEKSWC
Trigger: ACACCACGATTTTTCTGTCAAGCTCTGGATCCTGAC...GTGGCTGCCTCGCTCCGTCCACCCGTGTGTGTGTCCGGTGGGTCTCCACTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS TCA 90 bp CTTCCTTCGGCCCGTGGGCTGCCAGGCATCACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGCACCGTCCTTGGCAGAAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LPSARGLPGITSTLL*ERVLYCTVLGRRQL
Trigger: GAGCTGCCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 90 bp GCCGCCTTGATGAAGTCGTGGCAGGCTTGCACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGACATCACCTCGATGACGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AALMKSWQACTMSVI*RKLAADITSMTFLL
Trigger: CAGCAGGAACGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGTGCAAGCCTGCCACGACTTCATCAAGGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS-3UTR CAA 90 bp GCAAACGCCGGCTCCAGCGCACAGACCAGAGGCACCCGCAGTTCTGTCCCAAACCTTTCGGTTGTTCATTaGGAAGCCCTGGTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: ANAGSSAQTRGTRSSVPNLSVVH*EALVSP
Trigger: AGGCGACACCAGGGCTTCCAAATGAACAACCGAAAG...GTTTGGGACAGAACTGCGGGTGCCTCTGGTCTGTGCGCTGGAGCCGGCGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTGCTGCCTCTGCTCGTaGAGCTCCCGCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGCCLCS*SSRSRC
Trigger: GCACCTGCTGCGGGAGCTCAACGAGCAGAGGCAGCA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACAGGGCACCCTGTCATaGGTAGAACCGGGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKQGTLS*VEPGAN
Trigger: ATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAACCTCTTTCTCCAGCTTaGAGGAGCCCACAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEPLSPA*RSPQPP
Trigger: CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGG...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACTGAGGGGCCAGCGCTaGGCCCGGCTCCTATCCCCA +
Preference number: 5 (lower is better)
Translates to: HAANTWGGQWDTVGFREELRGQR*ARLLSP
Trigger: TGGGGATAGGAGCCGGGCCAAGCGCTGGCCCCTCAG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAACCACGCAGCAAACACTaGGGGAGGTCAGTGGGACAC +
Preference number: 5 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKPRSKH*GRSVGH
Trigger: GTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTGG...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCCCACGCAGCAAACACTaGGGGAGGTCAGTGGGACAC +
Preference number: 5 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWAPRSKH*GRSVGH
Trigger: GTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTGG...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS GCA 90 bp CGATTCTTCCTTCGGCCCGTGGGCTGCCAGGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGTACTGCACCGTCCTTGGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: RFFLRPVGCQASPAL*SEKEFCTAPSLAEG
Trigger: GCCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 90 bp CAGGCCATAGAGGCTGTGAAGAAACATCATCAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCCCGTAGCTGCTCCCTCCGTCGTGAC +
Preference number: 5 (lower is better)
Translates to: QAIEAVKKHHQGHRP*APDPLSRSCSLRRD
Trigger: GTCACGACGGAGGGAGCAGCTACGGGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTGATGATGTTTCTTCACAGCCTCTATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS-3UTR CAA 90 bp TGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACG +
Preference number: 5 (lower is better)
Translates to: CSPGPRKSHTLQSANLLGKSMMA*KPWAVT
Trigger: CGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTT...ACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGAAGTCGTGGCAGGCTaGCACGATGTCCGTCATCTG +
Preference number: 5 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSEVVAG*HDVRHL
Trigger: CAGATGACGGACATCGTGCAAGCCTGCCACGACTTC...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCTCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: GPAPIPTLRVQKNLGLFLSEASD*MLMSSA
Trigger: GGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGA...GAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTATCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AHLGLGNPTLFSRQTCSVSEASD*MLMSSA
Trigger: GGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGA...TACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAGAGTCTCCGGAAGAATaGGCAGGACTCGTTCGCCGT +
Preference number: 5 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEESPEE*AGLVRR
Trigger: ACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTC...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTGAGTCTCCGGAAGAATaGGCAGGACTCGTTCGCCGT +
Preference number: 5 (lower is better)
Translates to: RLARLLSPHSVCRKILASESPEE*AGLVRR
Trigger: ACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTC...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAGAGCGCATGTGTCGCTaGAGGATGCACTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: MSFPSTPPEMDVLTWASEERMCR*RMHWCM
Trigger: CATGCACCAGTGCATCCTCAAGCGACACATGCGCTC...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTGAGCGCATGTGTCGCTaGAGGATGCACTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: RLARLLSPHSVCRKILASERMCR*RMHWCM
Trigger: CATGCACCAGTGCATCCTCAAGCGACACATGCGCTC...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGCTTCAGTCGGCAAACTaGCTCGGTAAGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLLRWTCSPGPRKSHTLQLQSAN*LGKSGQ
Trigger: CTGCCCACTCTTACCGAGCAAGTTTGCCGACTGAAG...CTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGTGCGCCTTGAAGACCTaGCCCTCCACGACCACGCAG +
Preference number: 5 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPCALKT*PSTTTQ
Trigger: CTGCGTGGTCGTGGAGGGCAAGGTCTTCAAGGCGCA...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTGTACTGCACCGTCCTaGGCAGAAGGCAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RLLSPHSVCRKILASFSSCTAPS*AEGSSL
Trigger: GAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACA...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTACTGCAGTACGGACACTaGAACTTCTTCCTGATCACC +
Preference number: 5 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLLQYGH*NFFLIT
Trigger: GGTGATCAGGAAGAAGTTCAAGTGTCCGTACTGCAG...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTTTGCACACATACTTCTaGTCCTTGCTGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTLHTYF*SLLWTS
Trigger: GCTGGTCCACAGCAAGGACAAGAAGTATGTGTGCAA...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCACGCGGCTGCACACCTaGCACACATACTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: HDMSFPSTPPEMDVLTWATRLHT*HTYFLS
Trigger: GGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCGT...GGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GCTCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAGAGTCTTCCTCATCCTaGTCGTCCGCCAACAGCGCA +
Preference number: 5 (lower is better)
Translates to: AHLGLGNPTLFSRQTCSVESSSS*SSANSA
Trigger: TGCGCTGTTGGCGGACGACAAGGATGAGGAAGACTC...TACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCCCTCTTTCTCCAGCTTaGAGGAGCCCACAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RLLSPHSVCRKILASFSSPLSPA*RSPQPP
Trigger: CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGG...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTGGAAGATGTGCAAAGTaGGAAGCAGTAAGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: PPRLLRWTCSPGPRKSHTGRCAK*EAVSCV
Trigger: GACGCAGCTTACTGCTTCCAACTTTGCACATCTTCC...AGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp GCAGGCCTGAACGAGAAGACAGGCCGTGGCAACGGTCCCGAGGCTGTGAGTCTAGGAAGATGTGCAAAGTaGGAAGCAGTAAGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: AGLNEKTGRGNGPEAVSLGRCAK*EAVSCV
Trigger: GACGCAGCTTACTGCTTCCAACTTTGCACATCTTCC...TAGACTCACAGCCTCGGGACCGTTGCCACGGCCTGTCTTCTCGTTCAGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS CCA 90 bp GACGTGATTTCCATATCTTCCTTTCGGTTGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGACTCCTCGGGGGCCTCGGCGCACCC +
Preference number: 5 (lower is better)
Translates to: DVISISSFRLFIWKP*CRLFYRLLGGLGAP
Trigger: GGGTGCGCCGAGGCCCCCGAGGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGAAATCACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGACGTTCTTGTGCGCCTaGAAGACCTTGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: KILASFSSFEEPTASELRTFLCA*KTLPST
Trigger: CGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACGT...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGTCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPSEASD*MLMSSA
Trigger: GGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGA...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp GAGGCACCCGCAGTTCTGTCCCAAACCACTTCCAGCAGGGGAGGTGCCTTCGCTTGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: EAPAVLSQTTSSRGGAFACRTVS*FFRFFL
Trigger: AAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCA...AGCGAAGGCACCTCCCCTGCTGGAAGTGGTTTGGGACAGAACTGCGGGTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGAGCGCATGTGTCGCTaGAGGATGCACTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: RLLSPHSVCRKILASFSSERMCR*RMHWCM
Trigger: CATGCACCAGTGCATCCTCAAGCGACACATGCGCTC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAACATACTTCTTGTCCTaGCTGTGGACCAGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: MSFPSTPPEMDVLTWASETYFLS*LWTSVW
Trigger: CCACACGCTGGTCCACAGCAAGGACAAGAAGTATGT...TTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp AAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGAGCTGAGGGAGTCTTCCTCATCCTaGTCGTCCGCCAACAGCGCA +
Preference number: 5 (lower is better)
Translates to: KILASFSSFEEPTASELRESSSS*SSANSA
Trigger: TGCGCTGTTGGCGGACGACAAGGATGAGGAAGACTC...CCTCAGCTCGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCAGGGCACCCTGTCATaGGTAGAACCGGGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPQGTLS*VEPGAN
Trigger: ATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp TCCTGCGCTGTACCTGGAGTCCTCCATGTACTCCTCCACAGGACCCCCGGCCAGGTGTGCAGAAAAATCTaGGCCTCTTTCTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SCAVPGVLHVLLHRTPGQVCRKI*ASFSSF
Trigger: AAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACAC...CTGGCCGGGGGTCCTGTGGAGGAGTACATGGAGGACTCCAGGTACAGCGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS CCA 90 bp TGTGCCGGACGGTCTCTTTGTTTTTCCGATTCTTCCTTCGGCCCGTaGGCTGCCAGGCATCACCAGCACTCTGCTCTGAGAAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: CAGRSLCFSDSSFGP*AARHHQHSALRKSS
Trigger: AGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS-3UTR CAA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTACGTTCTTGTGCGCCTaGAAGACCTTGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPTFLCA*KTLPST
Trigger: CGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACGT...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCCAGCAGGACGTTCTaGTGCGCCTTGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: PCAEKSWPLSPALRSPQPPSRTF*CALKTL
Trigger: CAAGGTCTTCAAGGCGCACAAGAACGTCCTGCTGGG...AGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAAAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACG +
Preference number: 5 (lower is better)
Translates to: HAANTWGGQWDTVGFREEKSMMA*KPWAVT
Trigger: CGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTT...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CGCTTGGCCCGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTCTGCAGTACGGACACTaGAACTTCTTCCTGATCACC +
Preference number: 5 (lower is better)
Translates to: RLARLLSPHSVCRKILASLQYGH*NFFLIT
Trigger: GGTGATCAGGAAGAAGTTCAAGTGTCCGTACTGCAG...AGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCGGGCCAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp ACGCCTCCTGAGATGGACGTGCTCACCTGGGCCTCGGAAATCCCACACTCTTCATTGCACACATACTTCTaGTCCTTGCTGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: TPPEMDVLTWASEIPHSSLHTYF*SLLWTS
Trigger: GCTGGTCCACAGCAAGGACAAGAAGTATGTGTGCAA...TGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTCCATCTCAGGAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TCACCTGGGCCTCGGAAATCCCACACTCTTCAGTCGGCAAACTTGCTCGGTAAGCTTTCGGTTGTTCATTaGGAAGCCCTGGTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: SPGPRKSHTLQSANLLGKLSVVH*EALVSP
Trigger: AGGCGACACCAGGGCTTCCAAATGAACAACCGAAAG...CTTACCGAGCAAGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302995.2
CDS-3UTR CAA 90 bp GACAGCTCCAGCCAGGGCACCCTGTCATTGGTAGAACCGGGGGCCAATGTCAAAATATCTTCCTTTCGGTaGTTCATTTGGAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: DSSSQGTLSLVEPGANVKISSFR*FIWKPW
Trigger: CCAGGGCTTCCAAATGAACAACCGAAAGGAAGATAT...TTTGACATTGGCCCCCGGTTCTACCAATGACAGGGTGCCCTGGCTGGAGCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp GATCTGGGATGTTGTCCAATCACTACTAAGACAGCCTGTCAACAGCCATCTGAGTGTACTGCACCGTCCTaGGCAGAAGGCAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: DLGCCPITTKTACQQPSECTAPS*AEGSSL
Trigger: GAGCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACA...CTCAGATGGCTGTTGACAGGCTGTCTTAGTAGTGATTGGACAACATCCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS-3UTR CAA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTTGCACACATACTTCTaGTCCTTGCTGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGLHTYF*SLLWTS
Trigger: GCTGGTCCACAGCAAGGACAAGAAGTATGTGTGCAA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAAACGTTCTTGTGCGCCTaGAAGACCTTGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKETFLCA*KTLPST
Trigger: CGTGGAGGGCAAGGTCTTCAAGGCGCACAAGAACGT...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp TTCATGACATGTCTTTTCCCTCCACGCCTCCTGAGATGGACGTGCTCACCTGGGTGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: FMTCLFPPRLLRWTCSPGCRTVS*FFRFFL
Trigger: AAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCA...CCCAGGTGAGCACGTCCATCTCAGGAGGCGTGGAGGGAAAAGACATGTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGCAAAACCCAGAGACATaGGTGGGTAGCAAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPQNPET*VGSKGL
Trigger: CAGACCTTTGCTACCCACCAATGTCTCTGGGTTTTG...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CACGCAGCAAACACTTGGGGAGGTCAGTGGGACACTGTTGGTTTTAGGGAAGAACACACCGTGGGACCTTaGCTTTTCACTCAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: HAANTWGGQWDTVGFREEHTVGP*LFTQEK
Trigger: CTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTG...TTCTTCCCTAAAACCAACAGTGTCCCACTGACCTCCCCAAGTGTTTGCTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp CGGCTCCTATCCCCACACTCCGTGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCGTGTGCAGAAAAATCTaGGCCTCTTTCTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: RLLSPHSVCRKILASFSSVCRKI*ASFSSF
Trigger: AAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACAC...GCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAGGAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS-3UTR CAA 90 bp TGTGCAGAAAAATCTTGGCCTCTTTCTCCAGCTTTGAGGAGCCCACAGCCTCCGGTCAGGATCCAGAGCTaGACAGAAAAATCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: CAEKSWPLSPALRSPQPPVRIQS*TEKSWC
Trigger: ACACCACGATTTTTCTGTCAAGCTCTGGATCCTGAC...CGGAGGCTGTGGGCTCCTCAAAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS-3UTR CAA 90 bp TGCACCACAGCACACACCGTGGGACCTTTGCTTTTCACTCAGGAAAAGAAAGAATGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: CTTAHTVGPLLFTQEKKECRTVS*FFRFFL
Trigger: AAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCA...TTCTTTCTTTTCCTGAGTGAAAAGCAAAGGTCCCACGGTGTGTGCTGTGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245663.9
ENST00000395104.5
CDS CCA 90 bp GACGTGATTTCCATATCTTCCTTTCGGTTGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGACTCTGTGGAGGTAAGAACAAGAGT +
Preference number: 5 (lower is better)
Translates to: DVISISSFRLFIWKP*CRLFYRLCGGKNKS
Trigger: ACTCTTGTTCTTACCTCCACAGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGAAATCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395104.5
CDS GCA 72 bp CGCCGCCTCCGCCGCCATGGTCCAGGGGCCCGGCCATaGCGCGGCCAGCACAGTCGGTGCACACACCGTGGC +
Preference number: 6 (lower is better)
Translates to: RRLRRHGPGARP*RGQHSRCTHRG
Trigger: GCCACGGTGTGTGCACCGACTGTGCTGGCCGCGGCATGGCCGGGCCCCTGGACCATGGCGGCGGAGGCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS GCA 72 bp ACACACGGGTGGACGGAGCGAGGCAGCCACCGACCCTaGCGGCGGGCGGGCCTAGGAGAGCCAGGCGAAGTC +
Preference number: 6 (lower is better)
Translates to: THGWTERGSHRP*RRAGLGEPGEV
Trigger: GACTTCGCCTGGCTCTCCTAGGCCCGCCCGCCGGCAGGGTCGGTGGCTGCCTCGCTCCGTCCACCCGTGTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 72 bp GCCATGCCGCGGCCAGCACAGTCGGTGCACACACCGTaGCGCCTGGAGCCATGCCTGATGCCCACGCTGGCG +
Preference number: 6 (lower is better)
Translates to: AMPRPAQSVHTP*RLEPCLMPTLA
Trigger: CGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGACTGTGCTGGCCGCGGCATGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 72 bp CTCCAGATAGGGCCCGTCGCCTGGGAACAGCGCCTCTaGAGAGCCCTCGCCGCCTCCGCCGCCATGGTCCAG +
Preference number: 6 (lower is better)
Translates to: LQIGPVAWEQRL*RALAASAAMVQ
Trigger: CTGGACCATGGCGGCGGAGGCGGCGAGGGCTCTCCAGAGGCGCTGTTCCCAGGCGACGGGCCCTATCTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS TCA 72 bp ATGAGCGCCGCGCGCAGGTTGGCCACCGCGGTGGCCTaGTGCAGGGCGTCGTCCTTCTCTGGGGTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: MSAARRLATAVA*CRASSFSGVRG
Trigger: TCCCCTCACCCCAGAGAAGGACGACGCCCTGCATCAGGCCACCGCGGTGGCCAACCTGCGCGCGGCGCTCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000460757.1
ENST00000650966.1
CDS GCA 72 bp CCCTCCACGACCACGCAGACGTCGCACAGGACGCCGTaGTGCCTCTGCTCGTTGAGCTCCCGCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: PSTTTQTSHRTP*CLCSLSSRSRC
Trigger: GCACCTGCTGCGGGAGCTCAACGAGCAGAGGCAGCACGGCGTCCTGTGCGACGTCTGCGTGGTCGTGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp CGAGCCCGTCTCTGGAGCACAAAGACCCCCGGCCCCTaGGCGACCCGGACGAGCTCGCATTCAGCCAACGAC +
Preference number: 6 (lower is better)
Translates to: RARLWSTKTPGP*ATRTSSHSAND
Trigger: GTCGTTGGCTGAATGCGAGCTCGTCCGGGTCGCGCAGGGGCCGGGGGTCTTTGTGCTCCAGAGACGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460757.1
CDS CCA 72 bp CAAGGGACCCAGGCCGGGACAGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCAGGGAGCCGTCATCCC +
Preference number: 6 (lower is better)
Translates to: QGTQAGTASGPL*AGTRTAGSRHP
Trigger: GGGATGACGGCTCCCTGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGCTGTCCCGGCCTGGGTCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS GCA 72 bp GCACAGTCGGTGCACACACCGTGGCGCCTGGAGCCATaGCTGATGCCCACGCTGGCGGCGGACATGAAGACG +
Preference number: 6 (lower is better)
Translates to: AQSVHTPWRLEP*LMPTLAADMKT
Trigger: CGTCTTCATGTCCGCCGCCAGCGTGGGCATCAGGCATGGCTCCAGGCGCCACGGTGTGTGCACCGACTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 72 bp CACCGCGGTGGCCTGATGCAGGGCGTCGTCCTTCTCTaGGGTGAGGGGAGGGCCCAGATAGCTGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: HRGGLMQGVVLL*GEGRAQIAGFS
Trigger: GGAGAAGCCAGCTATCTGGGCCCTCCCCTCACCCCAGAGAAGGACGACGCCCTGCATCAGGCCACCGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000460757.1
ENST00000650966.1
CDS GCA 72 bp ATGGCCTTGAAGCCCTGGGCCGTGACGATGTCCAGGTaGGTGACCGTGGCCTGCTCCGACGTCTTCTGCACC +
Preference number: 6 (lower is better)
Translates to: MALKPWAVTMSR*VTVACSDVFCT
Trigger: GGTGCAGAAGACGTCGGAGCAGGCCACGGTCACGCACCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp GCTGGCTTCTCCTCCCAGGAGACCCTCCTCCACCTGTaGATAGAGCTCGGCCCTCTCTCCTCGGCTGTCGGA +
Preference number: 6 (lower is better)
Translates to: AGFSSQETLLHL*IELGPLSSAVG
Trigger: TCCGACAGCCGAGGAGAGAGGGCCGAGCTCTATGCACAGGTGGAGGAGGGTCTCCTGGGAGGAGAAGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000460757.1
ENST00000650966.1
CDS CCA 72 bp CGTGACAGCTGGCGATGGCCGAGTCTCCGGAAGAATTaGCAGGACTCGTTCGCCGTGCCAGCCACGGGGAGA +
Preference number: 6 (lower is better)
Translates to: RDSWRWPSLRKN*QDSFAVPATGR
Trigger: TCTCCCCGTGGCTGGCACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp TTCAGCCAACGACTCGGGACAGCGAGTGGGCCCCTCTaGGCAGGTACTCGAACAGCAGGGAGCCGTCATCCC +
Preference number: 6 (lower is better)
Translates to: FSQRLGTASGPL*AGTRTAGSRHP
Trigger: GGGATGACGGCTCCCTGCTGTTCGAGTACCTGCCCAGAGGGGCCCACTCGCTGTCCCGAGTCGTTGGCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460757.1
CDS TCA 72 bp GGACGAGGCGCCGATCTCGAACTCCGCAAGCTCATCTaGGGCGTCCGACTTGATGCTGATGTCCAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRGADLELRKLI*GVRLDADVQRR
Trigger: GCGGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAGTTCGAGATCGGCGCCTCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp CGAGTCTCCGGAAGAATTGGCAGGACTCGTTCGCCGTaGCAGCCACGGGGAGATGCTCCTCCCAGCCATCAC +
Preference number: 6 (lower is better)
Translates to: RVSGRIGRTRSP*QPRGDAPPSHH
Trigger: GTGATGGCTGGGAGGAGCATCTCCCCGTGGCTGGCACGGCGAACGAGTCCTGCCAATTCTTCCGGAGACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 90 bp CTGGTGAGCGCCAGGTGCGCTGAGTACATGAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACGATGTCCAGGTGCGTGACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: LVSARCAEYMKSMMA*KPWAVTMSRCVTVA
Trigger: GGCCACGGTCACGCACCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGCGCTCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 90 bp CTGATGCCCACGCTGGCGGCGGACATGAAGACGCGGCTGCACACCTaGCACACATACTTCTTGTCCTTGCTGTGGACCAGCGTGTGGCGC +
Preference number: 6 (lower is better)
Translates to: LMPTLAADMKTRLHT*HTYFLSLLWTSVWR
Trigger: GCGCCACACGCTGGTCCACAGCAAGGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCGTCTTCATGTCCGCCGCCAGCGTGGGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS TCA 72 bp TCCCTCCGTACTGAGACGGTGAAACCTGCTCTTCCTTaGTGCGCAGAGGCCCGTAGCCCACGTCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SLRTETVKPALP*CAEARSPRLQA
Trigger: GGCCTGGAGACGTGGGCTACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp TCCCGTAGCTGCTCCCTCCGTCGTGACAGCTGGCGATaGCCGAGTCTCCGGAAGAATTGGCAGGACTCGTTC +
Preference number: 6 (lower is better)
Translates to: SRSCSLRRDSWR*PSLRKNWQDSF
Trigger: GAACGAGTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAGCTACGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp CCTCTTTCCCGTAGCTGCTCCCTCCGTCGTGACAGCTaGCGATGGCCGAGTCTCCGGAAGAATTGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PLSRSCSLRRDS*RWPSLRKNWQD
Trigger: GTCCTGCCAATTCTTCCGGAGACTCGGCCATCGCCAGCTGTCACGACGGAGGGAGCAGCTACGGGAAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp GATGTCCAGCGCCGCCTTGATGAAGTCGTGGCAGGCTaGCACGATGTCCGTCATCTGCAGGAAGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: DVQRRLDEVVAG*HDVRHLQEAGG
Trigger: GCCGCCAGCTTCCTGCAGATGACGGACATCGTGCAAGCCTGCCACGACTTCATCAAGGCGGCGCTGGACATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 90 bp GAGGCGCCGATCTCGAACTCCGCAAGCTCATCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCCGCCTTGATGAAGTCGTGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: EAPISNSASSSEASD*MLMSSAALMKSWQA
Trigger: AGCCTGCCACGACTTCATCAAGGCGGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAGTTCGAGATCGGCGCCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS TCA 72 bp GGCAGAAGGCAGCTCGCTCCCTCCGTACTGAGACGGTaGAACCTGCTCTTCCTTGATGCGCAGAGGCCCGTA +
Preference number: 6 (lower is better)
Translates to: GRRQLAPSVLRR*NLLFLDAQRPV
Trigger: TACGGGCCTCTGCGCATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGAGCTGCCTTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp GCTGAGTACATGAAGTCGATGATGGCCTTGAAGCCCTaGGCCGTGACGATGTCCAGGTGCGTGACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: AEYMKSMMALKP*AVTMSRCVTVA
Trigger: GGCCACGGTCACGCACCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp GCCAGGTGCGCTGAGTACATGAAGTCGATGATGGCCTaGAAGCCCTGGGCCGTGACGATGTCCAGGTGCGTG +
Preference number: 6 (lower is better)
Translates to: ARCAEYMKSMMA*KPWAVTMSRCV
Trigger: CACGCACCTGGACATCGTCACGGCCCAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp GAGGCGTCCGACTTGATGCTGATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCTTGCACGATGTCCGTC +
Preference number: 6 (lower is better)
Translates to: EASDLMLMSSAA*MKSWQACTMSV
Trigger: GACGGACATCGTGCAAGCCTGCCACGACTTCATCAAGGCGGCGCTGGACATCAGCATCAAGTCGGACGCCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 90 bp ACACACGGCATCTGCGACATTTTTCAGGGCCTCCCACCCTGCGGCTaGCTGTCTTTCGTCCTCCTCTGTCCACTCACGCCCTCCCACGTT +
Preference number: 6 (lower is better)
Translates to: THGICDIFQGLPPCG*LSFVLLCPLTPSHV
Trigger: AACGTGGGAGGGCGTGAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGATGCCGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS TCA 72 bp CCGTCCTTGGCAGAAGGCAGCTCGCTCCCTCCGTACTaGGACGGTGAAACCTGCTCTTCCTTGATGCGCAGA +
Preference number: 6 (lower is better)
Translates to: PSLAEGSSLPPY*DGETCSSLMRR
Trigger: TCTGCGCATCAAGGAAGAGCAGGTTTCACCGTCTCAGTACGGAGGGAGCGAGCTGCCTTCTGCCAAGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS TCA 72 bp GCCCGTGGGCTGCCAGGCATCACCAGCACTCTGCTCTaGGAAAGAGTTCTGTACTGCACCGTCCTTGGCAGA +
Preference number: 6 (lower is better)
Translates to: ARGLPGITSTLL*ERVLYCTVLGR
Trigger: TCTGCCAAGGACGGTGCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGCCTGGCAGCCCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp CTTCGGCCCGTGGGCTGCCAGGCATCACCAGCACTCTaGTCTGAGAAAGAGTTCTGTACTGCACCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LRPVGCQASPAL*SEKEFCTAPSL
Trigger: CAAGGACGGTGCAGTACAGAACTCTTTCTCAGAGCAGAGTGCTGGTGATGCCTGGCAGCCCACGGGCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp TCTGCGACATTTTTCAGGGCCTCCCACCCTGCGGCTTaGTGTCTTTCGTCCTCCTCTGTCCACTCACGCCCT +
Preference number: 6 (lower is better)
Translates to: SATFFRASHPAA*CLSSSSVHSRP
Trigger: AGGGCGTGAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS GCA 72 bp CACGGCATCTGCGACATTTTTCAGGGCCTCCCACCCTaGGGCTTGCTGTCTTTCGTCCTCCTCTGTCCACTC +
Preference number: 6 (lower is better)
Translates to: HGICDIFQGLPP*GLLSFVLLCPL
Trigger: GAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGATGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS CAA 72 bp ATCTGCGACATTTTTCAGGGCCTCCCACCCTGCGGCTaGCTGTCTTTCGTCCTCCTCTGTCCACTCACGCCC +
Preference number: 6 (lower is better)
Translates to: ICDIFQGLPPCG*LSFVLLCPLTP
Trigger: GGGCGTGAGTGGACAGAGGAGGACGAAAGACAGCAAGCCGCAGGGTGGGAGGCCCTGAAAAATGTCGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS CAA 90 bp AGCTCATCTGAGGCGTCCGACTTGATGCTGATGTCCAGCGCCGCCTaGATGAAGTCGTGGCAGGCTTGCACGATGTCCGTCATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SSSEASDLMLMSSAA*MKSWQACTMSVICR
Trigger: CCTGCAGATGACGGACATCGTGCAAGCCTGCCACGACTTCATCAAGGCGGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGATGAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 90 bp CGGCTGTCATCTTCCACCTGCTGTGTGATGTGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTTCGGCCCGTGGGCTGCCAGGCATCA +
Preference number: 6 (lower is better)
Translates to: RLSSSTCCVMCRTVS*FFRFFLRPVGCQAS
Trigger: TGATGCCTGGCAGCCCACGGGCCGAAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCACATCACACAGCAGGTGGAAGATGACAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS TCA 72 bp CTCGATGACGTTCCTGCTGGTGAGCGCCAGGTGCGCTaGGTACATGAAGTCGATGATGGCCTTGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: LDDVPAGERQVR*VHEVDDGLEAL
Trigger: CAGGGCTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGCGCTCACCAGCAGGAACGTCATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp ATGAAGTCGTGGCAGGCTTGCACGATGTCCGTCATCTaGAGGAAGCTGGCGGCTGACATCACCTCGATGACG +
Preference number: 6 (lower is better)
Translates to: MKSWQACTMSVI*RKLAADITSMT
Trigger: CGTCATCGAGGTGATGTCAGCCGCCAGCTTCCTGCAGATGACGGACATCGTGCAAGCCTGCCACGACTTCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp GAGGCTGTGAAGAAACATCATCAGGGCCATCGGCCTTaGGCTCCTGATCCTCTTTCCCGTAGCTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: EAVKKHHQGHRP*APDPLSRSCSL
Trigger: GAGGGAGCAGCTACGGGAAAGAGGATCAGGAGCCCAAGGCCGATGGCCCTGATGATGTTTCTTCACAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CCA 72 bp TTGATGCTGATGTCCAGCGCCGCCTTGATGAAGTCGTaGCAGGCTTGCACGATGTCCGTCATCTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LMLMSSAALMKS*QACTMSVICRK
Trigger: CTTCCTGCAGATGACGGACATCGTGCAAGCCTGCCACGACTTCATCAAGGCGGCGCTGGACATCAGCATCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp ATCTCGAACTCCGCAAGCTCATCTGAGGCGTCCGACTaGATGCTGATGTCCAGCGCCGCCTTGATGAAGTCG +
Preference number: 6 (lower is better)
Translates to: ISNSASSSEASD*MLMSSAALMKS
Trigger: CGACTTCATCAAGGCGGCGCTGGACATCAGCATCAAGTCGGACGCCTCAGATGAGCTTGCGGAGTTCGAGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp TCTTCCACCTGCTGTGTGATGTGCCGGACGGTCTCTTaGTTTTTCCGATTCTTCCTTCGGCCCGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: SSTCCVMCRTVS*FFRFFLRPVGC
Trigger: GCAGCCCACGGGCCGAAGGAAGAATCGGAAAAACAAAGAGACCGTCCGGCACATCACACAGCAGGTGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS GCA 72 bp ATCACCTCGATGACGTTCCTGCTGGTGAGCGCCAGGTaGGCTGAGTACATGAAGTCGATGATGGCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: ITSMTFLLVSAR*AEYMKSMMALK
Trigger: CTTCAAGGCCATCATCGACTTCATGTACTCAGCGCACCTGGCGCTCACCAGCAGGAACGTCATCGAGGTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
ENST00000650966.1
CDS CAA 72 bp ATGAAGACGCGGCTGCACACCTTGCACACATACTTCTaGTCCTTGCTGTGGACCAGCGTGTGGCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: MKTRLHTLHTYF*SLLWTSVWRFM
Trigger: CATGAAGCGCCACACGCTGGTCCACAGCAAGGACAAGAAGTATGTGTGCAAGGTGTGCAGCCGCGTCTTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CAA 90 bp CCGGTAGTGGGACGTGATTTCCATATCTTCCTTTCGGTTGTTCATTaGGAAGCCCTGGTGTCGCCTCTTCTACAGACTCCTCGGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PVVGRDFHIFLSVVH*EALVSPLLQTPRGP
Trigger: AGGCCCCCGAGGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGAAATCACGTCCCACTACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS TCA 72 bp CAGGCAACACCACACCCAACTCCAAATATCCTTCCTTaGCTTGGGCCACAGCTTGAGTCTCGGCTGCTGAAC +
Preference number: 6 (lower is better)
Translates to: QATPHPTPNILP*LGPQLESRLLN
Trigger: GTTCAGCAGCCGAGACTCAAGCTGTGGCCCAAGTCAAGGAAGGATATTTGGAGTTGGGTGTGGTGTTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480766.1
CDS CCA 72 bp TCCATATCTTCCTTTCGGTTGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGACTCCTCGGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: SISSFRLFIWKP*CRLFYRLLGGL
Trigger: GAGGCCCCCGAGGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS CAA 90 bp TTGAGGATGCACTGGTGCATGGCCGAGAAGCTGCAGTACGGACACTaGAACTTCTTCCTGATCACCGTGAACTCATTCAGGGACAGCGAG +
Preference number: 6 (lower is better)
Translates to: LRMHWCMAEKLQYGH*NFFLITVNSFRDSE
Trigger: CTCGCTGTCCCTGAATGAGTTCACGGTGATCAGGAAGAAGTTCAAGTGTCCGTACTGCAGCTTCTCGGCCATGCACCAGTGCATCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CAA 72 bp CACTGGTGCATGGCCGAGAAGCTGCAGTACGGACACTaGAACTTCTTCCTGATCACCGTGAACTCATTCAGG +
Preference number: 6 (lower is better)
Translates to: HWCMAEKLQYGH*NFFLITVNSFR
Trigger: CCTGAATGAGTTCACGGTGATCAGGAAGAAGTTCAAGTGTCCGTACTGCAGCTTCTCGGCCATGCACCAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5
CDS CCA 72 bp TCCATATCTTCCTTTCGGTTGTTCATTTGGAAGCCCTaGTGTCGCCTCTTCTACAGACTCTGTGGAGGTAAG +
Preference number: 6 (lower is better)
Translates to: SISSFRLFIWKP*CRLFYRLCGGK
Trigger: CTTACCTCCACAGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395104.5
CDS CCA 72 bp GACGTGATTTCCATATCTTCCTTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTCTTCTACAGACTCCTC +
Preference number: 6 (lower is better)
Translates to: DVISISSFRLFI*KPWCRLFYRLL
Trigger: GAGGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGAAATCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650966.1
CDS CCA 72 bp GACGTGATTTCCATATCTTCCTTTCGGTTGTTCATTTaGAAGCCCTGGTGTCGCCTCTTCTACAGACTCTGT +
Preference number: 6 (lower is better)
Translates to: DVISISSFRLFI*KPWCRLFYRLC
Trigger: ACAGAGTCTGTAGAAGAGGCGACACCAGGGCTTCCAAATGAACAACCGAAAGGAAGATATGGAAATCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245663.9
ENST00000302995.2
ENST00000395104.5