RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB43 (Homo sapiens)

Ensembl gene IDs: ENSG00000169155

Ensembl transcript IDs: ENST00000373457.1, ENST00000373464.5, ENST00000449886.5, ENST00000450858.1

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACAGCAGCTTGGGGGTGTGTGAGCCTCTCAAGGAGGGAGCCCTaGAGGCTAAGCAGCTTTCCCCGGTGGTTAGAAGCCAGCCTTAGG +
Preference number: 1 (lower is better)
Translates to: STAAWGCVSLSRREP*RLSSFPRWLEASLR
Trigger: CCTAAGGCTGGCTTCTAACCACCGGGGAAAGCTGCTTAGCCTCCAGGGCTCCCTCCTTGAGAGGCTCACACACCCCCAAGCTGCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 90 bp AGCCTCTCAAGGAGGGAGCCCTGGAGGCTAAGCAGCTTTCCCCGGTaGTTAGAAGCCAGCCTTAGGGGCAGGTTAGTTCAGCAAATGCCC +
Preference number: 1 (lower is better)
Translates to: SLSRREPWRLSSFPR*LEASLRGRLVQQMP
Trigger: GGGCATTTGCTGAACTAACCTGCCCCTAAGGCTGGCTTCTAACCACCGGGGAAAGCTGCTTAGCCTCCAGGGCTCCCTCCTTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 90 bp AGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCACAGCAGCTTaGGGGTGTGTGAGCCTCTCAAGGAGGGAGCCCTGGAGGCTAAGC +
Preference number: 1 (lower is better)
Translates to: SFAASAPSQIHSTAA*GCVSLSRREPWRLS
Trigger: GCTTAGCCTCCAGGGCTCCCTCCTTGAGAGGCTCACACACCCCCAAGCTGCTGTGGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 90 bp GTAAAGCACCATAATCTAAGACAGAGCAGGGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAGCAGCTTGGTGTCTACCAGCCACAG +
Preference number: 1 (lower is better)
Translates to: VKHHNLRQSRGCGSP*YRGQSQQLGVYQPQ
Trigger: CTGTGGCTGGTAGACACCAAGCTGCTGTGACTGACCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGTCTTAGATTATGGTGCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 90 bp CTAAATTATCAGAGACCTTCCAAAAGCAAAAACCTGGACTCGTTGTaGTGGCGCCCTCTCCACGCCCACCCAGGAGGCCGCAGCACATCC +
Preference number: 1 (lower is better)
Translates to: LNYQRPSKSKNLDSL*WRPLHAHPGGRSTS
Trigger: GGATGTGCTGCGGCCTCCTGGGTGGGCGTGGAGAGGGCGCCATCACAACGAGTCCAGGTTTTTGCTTTTGGAAGGTCTCTGATAATTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR GCA 90 bp TCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGG +
Preference number: 1 (lower is better)
Translates to: SLSTCFDHNQSEGFP*QLGGGLTHPITHSR
Trigger: CCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 90 bp TCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTAGCACTCTATaGACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGC +
Preference number: 1 (lower is better)
Translates to: SALSLWLVECHLSTL*TTQVHRELSATTCG
Trigger: GCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATAGAGTGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CCA 90 bp CACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATaGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAT +
Preference number: 1 (lower is better)
Translates to: HSSLVSTSHREDPTV*RLQLTKQDLGKQTN
Trigger: ATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 90 bp AGTTTCTATTTAGAAGTAAATAACCCAGTACGATTGTGGAAAAGATaGCATGGTAGTAGCACCCTGTCCTACCCTGGTGATAACCTCAGG +
Preference number: 1 (lower is better)
Translates to: SFYLEVNNPVRLWKR*HGSSTLSYPGDNLR
Trigger: CCTGAGGTTATCACCAGGGTAGGACAGGGTGCTACTACCATGTCATCTTTTCCACAATCGTACTGGGTTATTTACTTCTAAATAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 90 bp TTTCCAGACAATGTTCAACAAGTAAACACCCTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCCAGCAATGTCTATTACATTACAGCA +
Preference number: 1 (lower is better)
Translates to: FPDNVQQVNTLVLGA*ESEAIASNVYYITA
Trigger: TGCTGTAATGTAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTGTTTACTTGTTGAACATTGTCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR GCA 90 bp ACAAGTAAACACCCTGGTGTTAGGAGCTTGAGAATCAGAGGCCATTaGCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: TSKHPGVRSLRIRGH*QQCLLHYSKAKLFK
Trigger: TTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTGTTTACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 90 bp AGACTTCTCCTGCAATGTCCTAATGATCATGTAAATAGTCTTCAATaGGAAACAGGACATCAAACCTTCCAAACAGGCAGAAAATGCTCT +
Preference number: 1 (lower is better)
Translates to: RLLLQCPNDHVNSLQ*ETGHQTFQTGRKCS
Trigger: AGAGCATTTTCTGCCTGTTTGGAAGGTTTGATGTCCTGTTTCTCATTGAAGACTATTTACATGATCATTAGGACATTGCAGGAGAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR GCA 90 bp TCTGTTTATCATCAAATGGTTTTGTGGCCTAAGAGTCACCTGACTTaGATAAATAAAGTACTTTTCTGGACGAAACATTGGGAACCTCAC +
Preference number: 1 (lower is better)
Translates to: SVYHQMVLWPKSHLT*INKVLFWTKHWEPH
Trigger: GTGAGGTTCCCAATGTTTCGTCCAGAAAAGTACTTTATTTATGCAAGTCAGGTGACTCTTAGGCCACAAAACCATTTGATGATAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 90 bp GCAGGGGCTGTGGCAGCCCGTGGTACCGTGGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: AGAVAARGTVVSHSS*VSTSHREDPTVWRL
Trigger: TAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGACCACGGTACCACGGGCTGCCACAGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 90 bp CAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCACAGCAGCTaGGGGGTGTGTGAGCCTCTCAAGGAGGGAGCCCTGGAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: QLCSFCSVSNSLHSS*GVCEPLKEGALEAK
Trigger: CTTAGCCTCCAGGGCTCCCTCCTTGAGAGGCTCACACACCCCCAAGCTGCTGTGGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCCAGCCCGTGGTACCGTaGTCAGTCACAGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: IPFPRESTALQLLLRLKFQPVVP*SVTAAW
Trigger: CCAAGCTGCTGTGACTGACCACGGTACCACGGGCTG...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGCAACCCCCTTCTCCTaGCTCTCTGAACATGGCCAG +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSATPFS*LSEHGQ
Trigger: CTGGCCATGTTCAGAGAGGCAGGAGAAGGGGGTTGC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 90 bp GTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAG +
Preference number: 2 (lower is better)
Translates to: VSVHLFRSQPVRRFP*PAGRWVNSPHYPFQ
Trigger: CTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASEGFP*QLGGGL
Trigger: TAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCTGCTGCCACCCAAAATaGAACTGGTGGGTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: IPFPRESTALQLLLRLKFCCHPK*NWWVES
Trigger: GGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCA...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCC +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLALVLGA*ESEAIA
Trigger: GGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGAGTCCAGTTCCAAGTaGAGGTGTCTCTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAESSSK*RCLCPP
Trigger: AGGTGGACAGAGACACCTGCACTTGGAACTGGACTC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCACCCAAAATGGAACTaGTGGGTGGAGTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSHPKWN*WVESSS
Trigger: GGAACTGGACTCCACCCACCAGTTCCATTTTGGGTG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAG +
Preference number: 2 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGCGSP*YRGQSQ
Trigger: CTGTGACTGACCACGGTACCACGGGCTGCCACAGCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTCTGCCCTCTCACTCTaGTTGGTGGAGTGTCACCTT +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASALSL*LVECHL
Trigger: AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGCGTGCCACCACTCTTaGCTGAACAGAAACTCTTCC +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSACHHS*LNRNSS
Trigger: GGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCCACTCATAGAATCCTaGCTATCTGCCCTCTCACTC +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSPLIES*LSALSL
Trigger: GAGTGAGAGGGCAGATAGGCAGGATTCTATGAGTGG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGAGTCCAGTTCCAAGTaGAGGTGTCTCTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLESSSK*RCLCPP
Trigger: AGGTGGACAGAGACACCTGCACTTGGAACTGGACTC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCCTAGCACAACTGACTaGTTCCAAAACTACCACCCA +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSPSTTD*FQNYHP
Trigger: TGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCTAGG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAACAGAGCAGGGGCTGTaGCAGCCCGTGGTACCGTGG +
Preference number: 2 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSTEQGL*QPVVPW
Trigger: CCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCCTCAGCCACAACTTGTaGCTCCTTCTCACTAAGTGT +
Preference number: 2 (lower is better)
Translates to: IPFPRESTALQLLLRLKFLSHNL*LLLTKC
Trigger: ACACTTAGTGAGAAGGAGCCACAAGTTGTGGCTGAG...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTCCTTGTAATAATGAGTaGTCCAAAGCTGCTGCCACC +
Preference number: 2 (lower is better)
Translates to: LIESCLSALSLWLVECHLPCNNE*SKAAAT
Trigger: GGTGGCAGCAGCTTTGGATCACTCATTATTACAAGG...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGGGAAAGCAAACCAATaGGAAATACCTATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAGKANQ*EIPISG
Trigger: GCCAGAGATAGGTATTTCTCATTGGTTTGCTTTCCC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: HYADFSRTEGPRLSQNICSEGFP*QLGGGL
Trigger: TAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATTGCCAGCTGGGCGGTaGGTTAACTCACCCCATTAC +
Preference number: 2 (lower is better)
Translates to: PHCMEATINQTGFGKANQLPAGR*VNSPHY
Trigger: GTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCACCCAAAATGGAACTaGTGGGTGGAGTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: PTLKECILKILLGQFCPPHPKWN*WVESSS
Trigger: GGAACTGGACTCCACCCACCAGTTCCATTTTGGGTG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGAAGACCCCACTGTATaGAGGCTACAATTAACCAAA +
Preference number: 2 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSEDPTV*RLQLTK
Trigger: TTTGGTTAATTGTAGCCTCCATACAGTGGGGTCTTC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCATGCACTTCACCACGTaGATTACTGTAACGTGTGTA +
Preference number: 2 (lower is better)
Translates to: IPFPRESTALQLLLRLKFMHFTT*ITVTCV
Trigger: TACACACGTTACAGTAATCCACGTGGTGAAGTGCAT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGGGAAAGCAAACCAATaGGAAATACCTATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLGKANQ*EIPISG
Trigger: GCCAGAGATAGGTATTTCTCATTGGTTTGCTTTCCC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 2 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 2 (lower is better)
Translates to: PTLKECILKILLGQFCPPVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTAGAATCCTGCCTATCTaGCCTCTCACTCTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: HYADFSRTEGPRLSQNICRILPI*PLTLVG
Trigger: ACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCAGAATCAGAGGCCATTaGCAGCAATGTCTATTACAT +
Preference number: 2 (lower is better)
Translates to: IPFPRESTALQLLLRLKFRIRGH*QQCLLH
Trigger: ATGTAATAGACATTGCTGGCAATGGCCTCTGATTCT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTAGAATCAGAGGCCATTaGCAGCAATGTCTATTACAT +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLARIRGH*QQCLLH
Trigger: ATGTAATAGACATTGCTGGCAATGGCCTCTGATTCT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAG +
Preference number: 2 (lower is better)
Translates to: VITSGMLHSLKACAILPFGCGSP*YRGQSQ
Trigger: CTGTGACTGACCACGGTACCACGGGCTGCCACAGCC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTTCTCACTCTGGTTGGTaGAGTGTCACCTTAGCACTC +
Preference number: 2 (lower is better)
Translates to: PTLKECILKILLGQFCPPSHSGW*SVTLAL
Trigger: GAGTGCTAAGGTGACACTCCACCAACCAGAGTGAGA...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTTTGGCAGAACAAAATaGCATCACCACCTTAGTACT +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAFGRTK*HHHLST
Trigger: AGTACTAAGGTGGTGATGCCATTTTGTTCTGCCAAA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCGATTGTGGAAAAGATaGCATGGTAGTAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: HYADFSRTEGPRLSQNICRLWKR*HGSSTL
Trigger: CAGGGTGCTACTACCATGTCATCTTTTCCACAATCG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGTAAATAGTCTTCAATaGGAAACAGGACATCAAACC +
Preference number: 2 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAVNSLQ*ETGHQT
Trigger: GGTTTGATGTCCTGTTTCTCATTGAAGACTATTTAC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGAGTCCAGTTCCAAGTaGAGGTGTCTCTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAESSSK*RCLCPP
Trigger: AGGTGGACAGAGACACCTGCACTTGGAACTGGACTC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCATTGCCAGCTGGGCGGTaGGTTAACTCACCCCATTAC +
Preference number: 2 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSLPAGR*VNSPHY
Trigger: GTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAAATGGAACTGGTGGGTaGAGTCCAGTTCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: PHCMEATINQTGFGKANQNGTGG*SPVPSA
Trigger: TGCACTTGGAACTGGACTCCACCCACCAGTTCCATT...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCATGCTGCCACCCAAAATaGAACTGGTGGGTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSCCHPK*NWWVES
Trigger: GGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCA...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAAGAAATACCTATCTCTaGCACCCTAGAGAATTACAA +
Preference number: 2 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGRNTYL*HPRELQ
Trigger: TTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCT...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCAGCCCGTGGTACCGTaGTCAGTCACAGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIQPVVP*SVTAAW
Trigger: CCAAGCTGCTGTGACTGACCACGGTACCACGGGCTG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACCCTCTCACTCTGGTTaGTGGAGTGTCACCTTAGCA +
Preference number: 2 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAPSHSG*WSVTLA
Trigger: TGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTAGAATCCTGCCTATCTaGCCTCTCACTCTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSRILPI*PLTLVG
Trigger: ACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTCCACTCATAGAATCCTaGCTATCTGCCCTCTCACTC +
Preference number: 2 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSPLIES*LSALSL
Trigger: GAGTGAGAGGGCAGATAGGCAGGATTCTATGAGTGG...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAPKWNW*VESSSK
Trigger: CTTGGAACTGGACTCCACCCACCAGTTCCATTTTGG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCACACCCAAAATGGAACTaGTGGGTGGAGTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSHPKWN*WVESSS
Trigger: GGAACTGGACTCCACCCACCAGTTCCATTTTGGGTG...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 90 bp CCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACCACTCATAGAATCCTGCCTATCTGC +
Preference number: 2 (lower is better)
Translates to: PHLERVYSQDSSWAV*SPLSITTHRILPIC
Trigger: GCAGATAGGCAGGATTCTATGAGTGGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: HYADFSRTEGPRLSQNICHSLFL*MPLKGQ
Trigger: CTGGCCCTTGAGTGGCATGCACAAAAATAAACTATG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGACTACCACCCAAGCGTaGCACCACTCTTGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRTTTQA*HHSWLN
Trigger: GTTCAGCCAAGAGTGGTGGCACGCTTGGGTGGTAGT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGAAGACCCCACTGTATaGAGGCTACAATTAACCAAA +
Preference number: 2 (lower is better)
Translates to: PTLKECILKILLGQFCPPEDPTV*RLQLTK
Trigger: TTTGGTTAATTGTAGCCTCCATACAGTGGGGTCTTC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGTCGGCGTAGCTTTGTaGACTTTTAAGTTTAAGCAG +
Preference number: 2 (lower is better)
Translates to: HYADFSRTEGPRLSQNICVGVAL*TFKFKQ
Trigger: CTGCTTAAACTTAAAAGTCCACAAAGCTACGCCGAC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 90 bp CTTTCCAGACAATGTTCAACAAGTAAACACCCTGGTGTTAGGAGCTaGAGAATCAGAGGCCATTGCCAGCAATGTCTATTACATTACAGC +
Preference number: 2 (lower is better)
Translates to: LSRQCSTSKHPGVRS*RIRGHCQQCLLHYS
Trigger: GCTGTAATGTAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTGTTTACTTGTTGAACATTGTCTGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 2 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAATGGAACTGGTGGGTaGAGTCCAGTTCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: VIPERLFEQCYPQPSKLINGTGG*SPVPSA
Trigger: TGCACTTGGAACTGGACTCCACCCACCAGTTCCATT...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAATGGAACTGGTGGGTaGAGTCCAGTTCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRNGTGG*SPVPSA
Trigger: TGCACTTGGAACTGGACTCCACCCACCAGTTCCATT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: VITSGMLHSLKACAILPFPKWNW*VESSSK
Trigger: CTTGGAACTGGACTCCACCCACCAGTTCCATTTTGG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTCTCACTCTGGTTGGTaGAGTGTCACCTTAGCACTC +
Preference number: 2 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSHSGW*SVTLAL
Trigger: GAGTGCTAAGGTGACACTCCACCAACCAGAGTGAGA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: VITSGMLHSLKACAILPFASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCTCAGCCACAACTTGTaGCTCCTTCTCACTAAGTGT +
Preference number: 2 (lower is better)
Translates to: VIPERLFEQCYPQPSKLILSHNL*LLLTKC
Trigger: ACACTTAGTGAGAAGGAGCCACAAGTTGTGGCTGAG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACCTTGTAATAATGAGTaGTCCAAAGCTGCTGCCACC +
Preference number: 2 (lower is better)
Translates to: RQQSSVNQFLILGITLFLPCNNE*SKAAAT
Trigger: GGTGGCAGCAGCTTTGGATCACTCATTATTACAAGG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAAGAAATACCTATCTCTaGCACCCTAGAGAATTACAA +
Preference number: 2 (lower is better)
Translates to: KEYLPHLERVYSQDSSWARNTYL*HPRELQ
Trigger: TTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGTCGGCGTAGCTTTGTaGACTTTTAAGTTTAAGCAG +
Preference number: 2 (lower is better)
Translates to: EAIASNVYYITAKPNFSNVGVAL*TFKFKQ
Trigger: CTGCTTAAACTTAAAAGTCCACAAAGCTACGCCGAC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: VITSGMLHSLKACAILPFHSLFL*MPLKGQ
Trigger: CTGGCCCTTGAGTGGCATGCACAAAAATAAACTATG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR TCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTCTACATTTAGTAGCTaGTGGACACATAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSTFSS*WTHKAF
Trigger: GAAAGCCTTATGTGTCCATCAGCTACTAAATGTAGA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: RQQSSVNQFLILGITLFLHSLFL*MPLKGQ
Trigger: CTGGCCCTTGAGTGGCATGCACAAAAATAAACTATG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 72 bp CAGAGACCTTCCAAAAGCAAAAACCTGGACTCGTTGTaGTGGCGCCCTCTCCACGCCCACCCAGGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: QRPSKSKNLDSL*WRPLHAHPGGR
Trigger: GCGGCCTCCTGGGTGGGCGTGGAGAGGGCGCCATCACAACGAGTCCAGGTTTTTGCTTTTGGAAGGTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp AAGACAGAGCAGGGGCTGTGGCAGCCCGTGGTACCGTaGTCAGTCACAGCAGCTTGGTGTCTACCAGCCACA +
Preference number: 3 (lower is better)
Translates to: KTEQGLWQPVVP*SVTAAWCLPAT
Trigger: TGTGGCTGGTAGACACCAAGCTGCTGTGACTGACCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp AGGAGGGAGCCCTGGAGGCTAAGCAGCTTTCCCCGGTaGTTAGAAGCCAGCCTTAGGGGCAGGTTAGTTCAG +
Preference number: 3 (lower is better)
Translates to: RREPWRLSSFPR*LEASLRGRLVQ
Trigger: CTGAACTAACCTGCCCCTAAGGCTGGCTTCTAACCACCGGGGAAAGCTGCTTAGCCTCCAGGGCTCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR GCA 72 bp TCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTaGTCCGTCTCAAATTCACTCCACAGCAGCTTGGGG +
Preference number: 3 (lower is better)
Translates to: SPSPGKAQLCSF*SVSNSLHSSLG
Trigger: CCCCAAGCTGCTGTGGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp CATAATCTAAGACAGAGCAGGGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAGCAGCTTGGTGTCTAC +
Preference number: 3 (lower is better)
Translates to: HNLRQSRGCGSP*YRGQSQQLGVY
Trigger: GTAGACACCAAGCTGCTGTGACTGACCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGTCTTAGATTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: LIESCLSALSLWLVECHLVRRFP*PAGRWV
Trigger: AACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGAC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 3 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 3 (lower is better)
Translates to: IPFPRESTALQLLLRLKFALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp TCCAAAGCTGCTGCCACCCAAAATGGAACTGGTGGGTaGAGTCCAGTTCCAAGTGCAGGTGTCTCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: SKAAATQNGTGG*SPVPSAGVSVH
Trigger: GTGGACAGAGACACCTGCACTTGGAACTGGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCAGCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp GTGATCCAAAGCTGCTGCCACCCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAGTGCAGGTGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: VIQSCCHPKWNW*VESSSKCRCLC
Trigger: ACAGAGACACCTGCACTTGGAACTGGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp CTGGTGGCACAGGAGGGATTGGGGATAACACAGTGCTaGTTTCCAGCACCCCTAAATTATCAGAGACCTTCC +
Preference number: 3 (lower is better)
Translates to: LVAQEGLGITQC*FPAPLNYQRPS
Trigger: GGAAGGTCTCTGATAATTTAGGGGTGCTGGAAACCAGCACTGTGTTATCCCCAATCCCTCCTGTGCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: PHCMEATINQTGFGKANQVRRFP*PAGRWV
Trigger: AACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGAC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTAAGGAGACAATAGGCTaGATTGTACAATCCCCTCAG +
Preference number: 3 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAKETIG*IVQSPQ
Trigger: CTGAGGGGATTGTACAATCAAGCCTATTGTCTCCTT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 72 bp TCACTCTGGTTGGTGGAGTGTCACCTTAGCACTCTATaGACTACTCAAGTTCACAGGGAACTCTCAGCCACA +
Preference number: 3 (lower is better)
Translates to: SLWLVECHLSTL*TTQVHRELSAT
Trigger: TGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATAGAGTGCTAAGGTGACACTCCACCAACCAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGC +
Preference number: 3 (lower is better)
Translates to: LIESCLSALSLWLVECHLYHSLF*CMPLKG
Trigger: GCCCTTGAGTGGCATGCACAAAAATAAACTATGGTA...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 3 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGA +
Preference number: 3 (lower is better)
Translates to: EAIASNVYYITAKPNFSNVSHSS*VSTSHR
Trigger: TCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGAC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR GCA 72 bp CACCCTGGTGTTAGGAGCTTGAGAATCAGAGGCCATTaGCAGCAATGTCTATTACATTACAGCAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: HPGVRSLRIRGH*QQCLLHYSKAK
Trigger: TTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGC +
Preference number: 3 (lower is better)
Translates to: HYADFSRTEGPRLSQNICYHSLF*CMPLKG
Trigger: GCCCTTGAGTGGCATGCACAAAAATAAACTATGGTA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGA +
Preference number: 3 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRVSHSS*VSTSHR
Trigger: TCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGAC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGAGAATCAGAGGCCATaGCCAGCAATGTCTATTACA +
Preference number: 3 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSENQRP*PAMSIT
Trigger: TGTAATAGACATTGCTGGCAATGGCCTCTGATTCTC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 72 bp AATGTTCAACAAGTAAACACCCTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCCAGCAATGTCTATTAC +
Preference number: 3 (lower is better)
Translates to: NVQQVNTLVLGA*ESEAIASNVYY
Trigger: GTAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTGTTTACTTGTTGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CCA 72 bp CCTTCCTTAGTTAACGGTGACATGCACTTCACCACGTaGATTACTGTAACGTGTGTATCTAAAGGTAAAAGC +
Preference number: 3 (lower is better)
Translates to: PSLVNGDMHFTT*ITVTCVSKGKS
Trigger: GCTTTTACCTTTAGATACACACGTTACAGTAATCCACGTGGTGAAGTGCATGTCACCGTTAACTAAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGC +
Preference number: 3 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSYHSLF*CMPLKG
Trigger: GCCCTTGAGTGGCATGCACAAAAATAAACTATGGTA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGGCACTATGTCAGCCTaGTACCGTAAATTATCTGTT +
Preference number: 3 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAGTMSA*YRKLSV
Trigger: AACAGATAATTTACGGTACAAGGCTGACATAGTGCC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTTAACCAAACAGGATTaGGGAAAGCAAACCAATGAG +
Preference number: 3 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSLTKQD*GKQTNE
Trigger: CTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACC +
Preference number: 3 (lower is better)
Translates to: VIPERLFEQCYPQPSKLISSWAV*SPLSIT
Trigger: GGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCTGGTCGGCGTAGCTTaGTGGACTTTTAAGTTTAAG +
Preference number: 3 (lower is better)
Translates to: VIPERLFEQCYPQPSKLILVGVA*WTFKFK
Trigger: CTTAAACTTAAAAGTCCACAAAGCTACGCCGACCAG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGAGGGTGATCAGTTTTaGGCAGAACAAAATGGCATC +
Preference number: 3 (lower is better)
Translates to: IPERLFEQCYPQPSKLIREGDQF*AEQNGI
Trigger: GATGCCATTTTGTTCTGCCAAAAACTGATCACCCTC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 72 bp ACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATaGGAAATACCTATCTCTGGCACCCTAGAGAATTAC +
Preference number: 3 (lower is better)
Translates to: TINQTGFGKANQ*EIPISGTLENY
Trigger: GTAATTCTCTAGGGTGCCAGAGATAGGTATTTCTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR TCA 72 bp CTGCAATGTCCTAATGATCATGTAAATAGTCTTCAATaGGAAACAGGACATCAAACCTTCCAAACAGGCAGA +
Preference number: 3 (lower is better)
Translates to: LQCPNDHVNSLQ*ETGHQTFQTGR
Trigger: TCTGCCTGTTTGGAAGGTTTGATGTCCTGTTTCTCATTGAAGACTATTTACATGATCATTAGGACATTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTACAGAGCAGGGGCTGTaGCAGCCCGTGGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTTEQGL*QPVVPW
Trigger: CCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCCACTGGTGGTGCCTTaGAGCCCTTTCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTPLVVP*SPFPWG
Trigger: TCCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCCAAGATATCCTCTCTaGCGCCGGCGCAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTPRYPL*RRRRPV
Trigger: AACAGGCCTGCGCCGGCGGCAGAGAGGATATCTTGG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGGGCCTGGAGCGCCTaGAGGCAACCTACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGGAWSA*RQPTAL
Trigger: CAGGGCTGTAGGTTGCCTGCAGGCGCTCCAGGCCCC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTGGCGGTCATGCTCTGTaGACGAGTTGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTGGHAL*TSCWAG
Trigger: ACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCC...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp GTGGCAGCCCGTGGTACCGTGGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGAGAAGACCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: VAARGTVVSHSS*VSTSHREDPTV
Trigger: TACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGACCACGGTACCACGGGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTGGCCGAAGACCGAGGTaGATGCTCATGTGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTGRRPR*MLMCRS
Trigger: AGATCGGCACATGAGCATGCACCTCGGTCTTCGGCC...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAACAGAGCAGGGGCTGTaGCAGCCCGTGGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGTEQGL*QPVVPW
Trigger: CCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGT...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCAACAGGCTGGGGGCCTaGAGCGCCTGCAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFNRLGA*SACRQP
Trigger: AGGTTGCCTGCAGGCGCTCCAGGCCCCCAGCCTGTT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTTGGATCCAGCGTTTGTaGGCCATGATGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTWIQRL*AMMLGL
Trigger: CAAGCCCAGCATCATGGCTCACAAACGCTGGATCCA...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCTGGTCACAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTLVTNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGTGACCAG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCAACCTGGACTCGTTGTaGTGGCGCCCTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFNLDSL*WRPLHA
Trigger: GGCGTGGAGAGGGCGCCATCACAACGAGTCCAGGTT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTAGGCGTGAGCCACCATaGCTGGCCCCAAGTATGAAT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTRREPP*LAPSMN
Trigger: ATTCATACTTGGGGCCAGGCATGGTGGCTCACGCCT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGGGGCCTGGAGCGCCTaGAGGCAACCTACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLGAWSA*RQPTAL
Trigger: CAGGGCTGTAGGTTGCCTGCAGGCGCTCCAGGCCCC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTACCACATGCCACATCTaGAGGAAGCTTGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTTTCHI*RKLAAV
Trigger: GACAGCGGCAAGCTTCCTCCAGATGTGGCATGTGGT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTTGGGCTTGCTGTACATaGGCCGGGTGTAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTWACCT*AGCSGT
Trigger: AGTTCCACTACACCCGGCCCATGTACAGCAAGCCCA...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTCGGAATCAACAGGCTaGGGGCCTGGAGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASESTG*GPGAPA
Trigger: TGCAGGCGCTCCAGGCCCCCAGCCTGTTGATTCCGA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTCAGCTTGGGGGTGTGTaGGCCTCTCAAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLQLGGV*ASQGGS
Trigger: GCTCCCTCCTTGAGAGGCTCACACACCCCCAAGCTG...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp CCGCAGCACATCCCCTTCCCCAGGGAAAGCACAGCTTaGCAGCTTCTGCTCCGTCTCAAATTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: PQHIPFPRESTA*QLLLRLKFTPQ
Trigger: CTGTGGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGATGTGCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCTCGGTGAGCTGGGATaGCAGCTCGTCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLALGELG*QLVFGA
Trigger: AGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTTGCCATTTCCGTaGTCAGGCGGTCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGGLPFP*SGGHAL
Trigger: CAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCCGAAGACCGAGGTaGATGCTCATGTGCCGATCT +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGGRRPR*MLMCRS
Trigger: AGATCGGCACATGAGCATGCACCTCGGTCTTCGGCC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCCTGTGGACGAGTTGCTaGGCAGGTATTCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFLWTSC*AGIRAR
Trigger: CCGAGCACGAATACCTGCCCAGCAACTCGTCCACAG...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCCAAAAGCAAAAACCTaGACTCGTTGTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTPKAKT*TRCDGA
Trigger: GGCGCCATCACAACGAGTCCAGGTTTTTGCTTTTGG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTTACCATGGGAGAGGGTaGTCAGTTTTTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTYHGRG*SVFGRT
Trigger: TGTTCTGCCAAAAACTGATCACCCTCTCCCATGGTA...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTCCACTGGTGGTGCCTTaGAGCCCTTTCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLPLVVP*SPFPWG
Trigger: TCCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGG...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTACCAAGATATCCTCTCTaGCGCCGGCGCAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLPRYPL*RRRRPV
Trigger: AACAGGCCTGCGCCGGCGGCAGAGAGGATATCTTGG...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTGGCCATTATAACTACTaGTGCTTGGTGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTGHYNY*CLVTGG
Trigger: ACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCC...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTCGCGTGCACATCCATaGCCTCGCAAGCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASRAHP*PRKPVL
Trigger: TAGAACAGGCTTGCGAGGGCATGGATGTGCACGCGA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTCCACTCCCGAAGGCTaGACCGTGTGCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLSTPEG*TVCSVC
Trigger: GCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTATTCTCACTGTAACCTaGTGCGAGGGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAILTVT*CEGSLL
Trigger: CAGGAGGCTGCCCTCGCAGCAGGTTACAGTGAGAAT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGATCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGSEGFP*QLGGGL
Trigger: TAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGA...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTACTACCACCCAAGCGTaGCACCACTCTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLATTTQA*HHSWLN
Trigger: GTTCAGCCAAGAGTGGTGGCACGCTTGGGTGGTAGT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCATAATTGTCCTTGCTaGCGCTGCTGGTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTHNCPC*RCWFSF
Trigger: GAAACTGAACCAGCAGCGCCAGCAAGGACAATTATG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTACCACATGCCACATCTaGAGGAAGCTTGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLATTCHI*RKLAAV
Trigger: GACAGCGGCAAGCTTCCTCCAGATGTGGCATGTGGT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTTGCCAGCTGGGCGGTaGGTTAACTCACCCCATTAC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLALPAGR*VNSPHY
Trigger: GTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCAGCAGCTTTCCCCGGTaGTTAGAAGCCAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSSSFPR*LEASLR
Trigger: CCTAAGGCTGGCTTCTAACCACCGGGGAAAGCTGCT...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGCCTATGGGCCCCACTaGGTAAGGGATTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAAYGPH*VRDSIP
Trigger: AGGGATTGAATCCCTTACCCAGTGGGGCCCATAGGC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGTCACAAAAGTAGGGTaGACTGGCAGCAAGAACGGC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAVTKVG*TGSKNG
Trigger: GCCGTTCTTGCTGCCAGTTCACCCTACTTTTGTGAC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGGTATTCGTGCTCGGTaGGCTGGGATGACAGCTCGT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLGIRAR*AGMTAR
Trigger: ACGAGCTGTCATCCCAGCTCACCGAGCACGAATACC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTTGGATCCAGCGTTTGTaGGCCATGATGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLWIQRL*AMMLGL
Trigger: CAAGCCCAGCATCATGGCTCACAAACGCTGGATCCA...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTAACCTGGACTCGTTGTaGTGGCGCCCTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPNLDSL*WRPLHA
Trigger: GGCGTGGAGAGGGCGCCATCACAACGAGTCCAGGTT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTCTGGGCAGGTATTCGTaGTCGGTGAGCTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLLGRYS*SVSWDD
Trigger: GTCATCCCAGCTCACCGAGCACGAATACCTGCCCAG...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGAAGGCTGCACCGTGTaGTCTGTCTGCACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLEGCTV*SVCTVL
Trigger: CAACACCGTGCAGACAGAGCACACGGTGCAGCCTTC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTATTCTGCTCAGCCTTTaGAGCTTCGTAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTILLSL*SFVGLS
Trigger: ACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAAT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTTCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLSEGFP*QLGGGL
Trigger: TAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGA...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGTGATCTCGGCTCACTaGCACCTCCACCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLVISAH*HLHLLV
Trigger: AACCAGAAGGTGGAGGTGGCAGTGAGCCGAGATCAC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTGTTGTAGCCTCAGCTaGCGCAACAGATTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLACCSLS*RNRFSL
Trigger: CAGGCTGAATCTGTTGCGGCAGCTGAGGCTACAACA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449886.5
CDS-3UTR CCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTTGCTGCCACCCAAAATaGAACTGGTGGGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLCCHPK*NWWVES
Trigger: GGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCA...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGATCTGCCCTCTCACTCTaGTTGGTGGAGTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGSALSL*LVECHL
Trigger: AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGA...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGCGTGCCACCACTCTTaGCTGAACAGAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGACHHS*LNRNSS
Trigger: GGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTCGGAATCAACAGGCTaGGGGCCTGGAGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICSESTG*GPGAPA
Trigger: TGCAGGCGCTCCAGGCCCCCAGCCTGTTGATTCCGA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTATCAAGGAGGGAGCCCTaGAGGCTAAGCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLSRREP*RLSSFP
Trigger: GGGAAAGCTGCTTAGCCTCCAGGGCTCCCTCCTTGA...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGGCTTTATGCCTGTGTaGATTTTCATGTGGCCCACG +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSGFMPV*IFMWPT
Trigger: CGTGGGCCACATGAAAATTCACACAGGCATAAAGCC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTCTTTCCCATGGGGATTaGAGAAAAACCACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTLSHGD*RKTTVK
Trigger: CTTAACTGTGGTTTTTCTTCAATCCCCATGGGAAAG...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTCTGGTCACAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLLVTNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGTGACCAG...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAAAGAACGGCTTTGTGTaGCCGGAAAATGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGKNGFV*PENVAL
Trigger: CAAGGCCACATTTTCCGGGCACACAAAGCCGTTCTT...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGCTCTGTGGACGAGTTaGTGGGCAGGTATTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLALWTS*WAGIRA
Trigger: AGCACGAATACCTGCCCAGCAACTCGTCCACAGAGC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTTCCACTCCCGAAGGCTaGACCGTGTGCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSSTPEG*TVCSVC
Trigger: GCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGA...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGCAGCCTCCTGTCTGTaGCCAATTAGATTCCCATCT +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGAASCL*PIRFPS
Trigger: AGATGGGAATCTAATTGGGCACAGACAGGAGGCTGC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGAAGACCGAGGTGCATaGTCATGTGCCGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLEDRGA*SCADLS
Trigger: AGAGAGATCGGCACATGAGCATGCACCTCGGTCTTC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGTACAAGAAGTCACATaGCGGTGGAAACTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSVQEVT*RWKLSL
Trigger: GAGGGACAGTTTCCACCGGCATGTGACTTCTTGTAC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGTACAAGAAGTCACATaGCGGTGGAAACTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGVQEVT*RWKLSL
Trigger: GAGGGACAGTTTCCACCGGCATGTGACTTCTTGTAC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCCACTCATAGAATCCTaGCTATCTGCCCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAPLIES*LSALSL
Trigger: GAGTGAGAGGGCAGATAGGCAGGATTCTATGAGTGG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTACTACCACCCAAGCGTaGCACCACTCTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLTTTQA*HHSWLN
Trigger: GTTCAGCCAAGAGTGGTGGCACGCTTGGGTGGTAGT...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGGCAACCTACAGCCCTaGAGGGTAAGTTACCGCAGT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLGNLQP*RVSYRS
Trigger: ACTGCGGTAACTTACCCTGCAGGGCTGTAGGTTGCC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCTTGGGGATAACACAGTaGTGGTTTCCAGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSLGITQ*WFPAPL
Trigger: TAGGGGTGCTGGAAACCAGCACTGTGTTATCCCCAA...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACCTTGCTGGCGCTGCTaGTTCAGTTTCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGPCWRC*FSFCRM
Trigger: CATTCTACAGAAACTGAACCAGCAGCGCCAGCAAGG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTGGGCTTGCTGTACATaGGCCGGGTGTAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLWACCT*AGCSGT
Trigger: AGTTCCACTACACCCGGCCCATGTACAGCAAGCCCA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTATGTGGCCCACGAGATaGTGCTTCATTTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTMWPTR*CFILNF
Trigger: GAAATTCAAAATGAAGCACCATCTCGTGGGCCACAT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTATTGCCAGCTGGGCGGTaGGTTAACTCACCCCATTAC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLLPAGR*VNSPHY
Trigger: GTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCCCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFPKWNW*VESSSK
Trigger: CTTGGAACTGGACTCCACCCACCAGTTCCATTTTGG...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAACAGAGCAGGGGCTGTaGCAGCCCGTGGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWATEQGL*QPVVPW
Trigger: CCACGGTACCACGGGCTGCCACAGCCCCTGCTCTGT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCAAATGCCCACTAGAATaGAGGGGATCCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSKCPLE*RGSLWA
Trigger: TGCCCAAAGGGATCCCCTCCATTCTAGTGGGCATTT...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGTCACAAAAGTAGGGTaGACTGGCAGCAAGAACGGC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLVTKVG*TGSKNG
Trigger: GCCGTTCTTGCTGCCAGTTCACCCTACTTTTGTGAC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCTCGGTGAGCTGGGATaGCAGCTCGTCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPLGELG*QLVFGA
Trigger: AGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCTCGGTGAGCTGGGATaGCAGCTCGTCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICLGELG*QLVFGA
Trigger: AGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGGTATTCGTGCTCGGTaGGCTGGGATGACAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICGIRAR*AGMTAR
Trigger: ACGAGCTGTCATCCCAGCTCACCGAGCACGAATACC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAAGCGTTTGTGAGCCATaGTGCTGGGCTTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLSVCEP*CWACCT
Trigger: TGTACAGCAAGCCCAGCATCATGGCTCACAAACGCT...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACCTTGTAATAATGAGTaGTCCAAAGCTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGPCNNE*SKAAAT
Trigger: GGTGGCAGCAGCTTTGGATCACTCATTATTACAAGG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCGATTGTGGAAAAGATaGCATGGTAGTAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLARLWKR*HGSSTL
Trigger: CAGGGTGCTACTACCATGTCATCTTTTCCACAATCG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTCACATAATTGTCCTTaGTGGCGCTGCTGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASHNCP*WRCWFS
Trigger: ACTGAACCAGCAGCGCCAGCAAGGACAATTATGTGA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCATCTGGAGGAAGCTTaGCGCTGTCAAGTAACTAAC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAHLEEA*RCQVTN
Trigger: GTTAGTTACTTGACAGCGGCAAGCTTCCTCCAGATG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGTGACTGGTGGTCACTaGCATGATTTAGCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGVTGGH*HDLASD
Trigger: GTCAGAAGCTAAATCATGGCAGTGACCACCAGTCAC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTCTGGGCAGGTATTCGTaGTCGGTGAGCTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSLGRYS*SVSWDD
Trigger: GTCATCCCAGCTCACCGAGCACGAATACCTGCCCAG...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGTGCTCAGGCGGTCATaGTCTGTGGACGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSVLRRS*SVDELL
Trigger: CAGCAACTCGTCCACAGAGCATGACCGCCTGAGCAC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGCTTGCCATTTCCGTaGTCAGGCGGTCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGLPFP*SGGHAL
Trigger: CAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGAAGACCGAGGTGCATaGTCATGTGCCGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLEDRGA*SCADLS
Trigger: AGAGAGATCGGCACATGAGCATGCACCTCGGTCTTC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGCCGAAGACCGAGGTaGATGCTCATGTGCCGATCT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGRRPR*MLMCRS
Trigger: AGATCGGCACATGAGCATGCACCTCGGTCTTCGGCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGCAACCCCCTTCTCCTaGCTCTCTGAACATGGCCAG +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICATPFS*LSEHGQ
Trigger: CTGGCCATGTTCAGAGAGGCAGGAGAAGGGGGTTGC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCGGAAAATGTGGCCTTaGACAACAATGGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLARKMWP*TTMETS
Trigger: TGACGTCTCCATTGTTGTCCAAGGCCACATTTTCCG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTCTGTGGACGAGTTGCTaGGCAGGTATTCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSLWTSC*AGIRAR
Trigger: CCGAGCACGAATACCTGCCCAGCAACTCGTCCACAG...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTACACCCAAAATGGAACTaGTGGGTGGAGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLHPKWN*WVESSS
Trigger: GGAACTGGACTCCACCCACCAGTTCCATTTTGGGTG...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAGCGSP*YRGQSQ
Trigger: CTGTGACTGACCACGGTACCACGGGCTGCCACAGCC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAAACAGGCTGGGGGCCTaGAGCGCCTGCAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSNRLGA*SACRQP
Trigger: AGGTTGCCTGCAGGCGCTCCAGGCCCCCAGCCTGTT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAAAATCACAAAACTGGTaGCACAGGAGGGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGKSQNW*HRRDWG
Trigger: TCCCCAATCCCTCCTGTGCCACCAGTTTTGTGATTT...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTACTACTGCTGCTTGGTaGCTGGTGGTCACTGCCATG +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPTTAAW*LVVTAM
Trigger: CATGGCAGTGACCACCAGTCACCAAGCAGCAGTAGT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCTCTGACTCTTGTGAGTaGAACTTTTCCCACACTGAC +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFSDSCE*NFSHTD
Trigger: GTCAGTGTGGGAAAAGTTTCACTCACAAGAGTCAGA...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGATGGTGCTTCATTTTaGATTTCTTACCGCAGACCC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLADGASF*ISYRRP
Trigger: GGGTCTGCGGTAAGAAATTCAAAATGAAGCACCATC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGTATCTCCCCCACCTTaGAAGAGTGTATTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGVSPPP*KSVFSR
Trigger: TCTTGAGAATACACTCTTTCAAGGTGGGGGAGATAC...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTAAAGCTATATTGAGGTaGAGAGAAGAGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTKAILR*REETIP
Trigger: AGGAATAGTCTCTTCTCTTCACCTCAATATAGCTTT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTATGTCCTTGCTGGCGCTaGTGGTTCAGTTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLCPCWR*WFSFCR
Trigger: TCTACAGAAACTGAACCAGCAGCGCCAGCAAGGACA...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCATTATAACTACTGCTaGTTGGTGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSHYNYC*LVTGGH
Trigger: GTGACCACCAGTCACCAAGCAGCAGTAGTTATAATG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTATTCTCACTGTAACCTaGTGCGAGGGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICILTVT*CEGSLL
Trigger: CAGGAGGCTGCCCTCGCAGCAGGTTACAGTGAGAAT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGTACAAGAAGTCACATaGCGGTGGAAACTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLVQEVT*RWKLSL
Trigger: GAGGGACAGTTTCCACCGGCATGTGACTTCTTGTAC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTAGGCGTGAGCCACCATaGCTGGCCCCAAGTATGAAT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSRREPP*LAPSMN
Trigger: ATTCATACTTGGGGCCAGGCATGGTGGCTCACGCCT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGCAAAGCTGTATTCCTaGGATAGAGTTCCTTATGCC +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSAKLYS*DRVPYA
Trigger: GGCATAAGGAACTCTATCCCAGGAATACAGCTTTGC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTACCACATGCCACATCTaGAGGAAGCTTGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICTTCHI*RKLAAV
Trigger: GACAGCGGCAAGCTTCCTCCAGATGTGGCATGTGGT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGGCGGTCATGCTCTGTaGACGAGTTGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSGGHAL*TSCWAG
Trigger: ACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTGCTGCCACCCAAAATaGAACTGGTGGGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICCCHPK*NWWVES
Trigger: GGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTCAGCCCGTGGTACCGTaGTCAGTCACAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSQPVVP*SVTAAW
Trigger: CCAAGCTGCTGTGACTGACCACGGTACCACGGGCTG...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGTCACAAAAGTAGGGTaGACTGGCAGCAAGAACGGC +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPVTKVG*TGSKNG
Trigger: GCCGTTCTTGCTGCCAGTTCACCCTACTTTTGTGAC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGGTATTCGTGCTCGGTaGGCTGGGATGACAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSGIRAR*AGMTAR
Trigger: ACGAGCTGTCATCCCAGCTCACCGAGCACGAATACC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTAGCGTTTGTGAGCCATaGTGCTGGGCTTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICSVCEP*CWACCT
Trigger: TGTACAGCAAGCCCAGCATCATGGCTCACAAACGCT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTCACCTTAGCACTCTATaGACTACTCAAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLHLSTL*TTQVHR
Trigger: CCTGTGAACTTGAGTAGTTCATAGAGTGCTAAGGTG...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICLVLGA*ESEAIA
Trigger: GGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCTTTCCCATGGGGATTaGAGAAAAACCACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLALSHGD*RKTTVK
Trigger: CTTAACTGTGGTTTTTCTTCAATCCCCATGGGAAAG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTCACATAATTGTCCTTaGTGGCGCTGCTGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLSHNCP*WRCWFS
Trigger: ACTGAACCAGCAGCGCCAGCAAGGACAATTATGTGA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCCTCTAAAACTTCAGTaGATTTGTCTACCACATGCC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAPLKLQ*ICLPHA
Trigger: GGCATGTGGTAGACAAATGCACTGAAGTTTTAGAGG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGGCTTGCCATTTCCGTaGTCAGGCGGTCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAGLPFP*SGGHAL
Trigger: CAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGHSLFL*MPLKGQ
Trigger: CTGGCCCTTGAGTGGCATGCACAAAAATAAACTATG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCTCTCAGACTTCTCCTaGAATGTCCTAATGATCATG +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSLSDFS*NVLMIM
Trigger: CATGATCATTAGGACATTGCAGGAGAAGTCTGAGAG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGGCAACCTACAGCCCTaGAGGGTAAGTTACCGCAGT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQGNLQP*RVSYRS
Trigger: ACTGCGGTAACTTACCCTGCAGGGCTGTAGGTTGCC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATTCGAGCGATTCTCCTaGCTTGGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQFERFS*LGLPSS
Trigger: GCTACTTGGGAGGCCAAGGCAGGAGAATCGCTCGAA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATTCTTCTCCCCGATGTaGAAGTCCTCCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQFFSPM*KSSSTP
Trigger: GGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGATACAGCTTGTCAGTaGCTGAGAATCCTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLDTACQ*LRILSG
Trigger: CCCACTTAGGATTCTCAGCCACTGACAAGCTGTATC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTATGTGGCCCACGAGATaGTGCTTCATTTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAMWPTR*CFILNF
Trigger: GAAATTCAAAATGAAGCACCATCTCGTGGGCCACAT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCCCTCTCACTCTGGTTaGTGGAGTGTCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICPSHSG*WSVTLA
Trigger: TGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTTATAATGTGGGAGCATaGTTCTGTAGACTACCTTGC +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAYNVGA*FCRLPC
Trigger: GCAAGGTAGTCTACAGAACCATGCTCCCACATTATA...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGTCGGCGTAGCTTTGTaGACTTTTAAGTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSVGVAL*TFKFKQ
Trigger: CTGCTTAAACTTAAAAGTCCACAAAGCTACGCCGAC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGGGATAACACAGTGCTaGTTTCCAGCACCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLGITQC*FPAPLN
Trigger: ATTTAGGGGTGCTGGAAACCAGCACTGTGTTATCCC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAAAATCACAAAACTGGTaGCACAGGAGGGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLKSQNW*HRRDWG
Trigger: TCCCCAATCCCTCCTGTGCCACCAGTTTTGTGATTT...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTCCTAAATCACAAAACTaGTGGCACAGGAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLPKSQN*WHRRDW
Trigger: CCAATCCCTCCTGTGCCACCAGTTTTGTGATTTAGG...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATTGGGAAAATCAGTATaGCCCCCAGAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQLGKSV*PPEPSS
Trigger: TGAGCTGGGCTCTGGGGGTCATACTGATTTTCCCAA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGCTTTATGCCTGTGTaGATTTTCATGTGGCCCACG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGFMPV*IFMWPT
Trigger: CGTGGGCCACATGAAAATTCACACAGGCATAAAGCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGCCACCACTCTTGGCTaGACAGAAACTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSATTLG*TETLPH
Trigger: ATGAGGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTCTTTCCCATGGGGATTaGAGAAAAACCACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLLSHGD*RKTTVK
Trigger: CTTAACTGTGGTTTTTCTTCAATCCCCATGGGAAAG...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATCCACTGGTGGTGCCTTaGAGCCCTTTCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNPLVVP*SPFPWG
Trigger: TCCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGG...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGCCTGGCCCCAAGTATaGATATTAAATACCACTGGT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLAWPQV*ILNTTG
Trigger: ACCAGTGGTATTTAATATTCATACTTGGGGCCAGGC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCAGCTTGGGGGTGTGTaGGCCTCTCAAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFQLGGV*ASQGGS
Trigger: GCTCCCTCCTTGAGAGGCTCACACACCCCCAAGCTG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTGTCCTTGCTGGCGCTaGTGGTTCAGTTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICCPCWR*WFSFCR
Trigger: TCTACAGAAACTGAACCAGCAGCGCCAGCAAGGACA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCGCAAAACAATTCTCCTaGTGTTTTTCAGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSAKQFS*CFSGVP
Trigger: AGGTACTCCTGAAAAACAGCAGGAGAATTGTTTTGC...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTACATTTGTCTACCACATaGCACATCTGGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLHLSTT*HIWRKL
Trigger: AAGCTTCCTCCAGATGTGGCATGTGGTAGACAAATG...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGCTCTGTGGACGAGTTaGTGGGCAGGTATTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSALWTS*WAGIRA
Trigger: AGCACGAATACCTGCCCAGCAACTCGTCCACAGAGC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAACCGTGTGCTCTGTCTaGACGGTGTTGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQTVCSV*TVLMDS
Trigger: AGAGTCCATCAACACCGTGCAGACAGAGCACACGGT...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTCCACTCCCGAAGGCTaGACCGTGTGCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNSTPEG*TVCSVC
Trigger: GCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACCTGCTCATCATAATTaGTTTCATCAGCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGPAHHN*FHQPVH
Trigger: ATGAACAGGCTGATGAAAGCAATTATGATGAGCAGG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGCAGCCTCCTGTCTGTaGCCAATTAGATTCCCATCT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSAASCL*PIRFPS
Trigger: AGATGGGAATCTAATTGGGCACAGACAGGAGGCTGC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTATTCTCACTGTAACCTaGTGCGAGGGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSILTVT*CEGSLL
Trigger: CAGGAGGCTGCCCTCGCAGCAGGTTACAGTGAGAAT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGAAGACCGAGGTGCATaGTCATGTGCCGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQEDRGA*SCADLS
Trigger: AGAGAGATCGGCACATGAGCATGCACCTCGGTCTTC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTAATCTTGTTCGGTGCTaGCAAGGGCTCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSNLVRC*QGLSAH
Trigger: GTGAGCGCTGAGCCCTTGGCAGCACCGAACAAGATT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449886.5
CDS-3UTR CCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGAGTTCCTTATGCCATaGCCATCAAAAAGCAACATG +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLEFLMP*PSKSNM
Trigger: CATGTTGCTTTTTGATGGCCATGGCATAAGGAACTC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCCTTGCTGGCGCTGCTaGTTCAGTTTCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICPCWRC*FSFCRM
Trigger: CATTCTACAGAAACTGAACCAGCAGCGCCAGCAAGG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGGCCTTGGACAACAATaGAGACGTCACATAATTGTC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLGLGQQ*RRHIIV
Trigger: GACAATTATGTGACGTCTCCATTGTTGTCCAAGGCC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTTGTGCCCGGAAAATGTaGCCTTGGACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSCARKM*PWTTME
Trigger: CTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACA...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGAAGTCACATGCCGGTaGAAACTGTCCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPEVTCR*KLSLHI
Trigger: TATGTGGAGGGACAGTTTCCACCGGCATGTGACTTC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGAAGTCACATGCCGGTaGAAACTGTCCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSEVTCR*KLSLHI
Trigger: TATGTGGAGGGACAGTTTCCACCGGCATGTGACTTC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGAAGTCACATGCCGGTaGAAACTGTCCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICEVTCR*KLSLHI
Trigger: TATGTGGAGGGACAGTTTCCACCGGCATGTGACTTC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTAATGGAACTGGTGGGTaGAGTCCAGTTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICNGTGG*SPVPSA
Trigger: TGCACTTGGAACTGGACTCCACCCACCAGTTCCATT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICPKWNW*VESSSK
Trigger: CTTGGAACTGGACTCCACCCACCAGTTCCATTTTGG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGGCTGTGGCAGCCCGTaGTACCGTGGTCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIGCGSP*YRGQSQ
Trigger: CTGTGACTGACCACGGTACCACGGGCTGCCACAGCC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCTTTGGCAGAACAAAATaGCATCACCACCTTAGTACT +
Preference number: 4 (lower is better)
Translates to: IPFPRESTALQLLLRLKFFGRTK*HHHLST
Trigger: AGTACTAAGGTGGTGATGCCATTTTGTTCTGCCAAA...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGCTCTGCTAATACCATaGGAGAGGGTGATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLALLIP*ERVISF
Trigger: AAAACTGATCACCCTCTCCCATGGTATTAGCAGAGC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAAGCGTTTGTGAGCCATaGTGCTGGGCTTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWASVCEP*CWACCT
Trigger: TGTACAGCAAGCCCAGCATCATGGCTCACAAACGCT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGCCACCACTCTTGGCTaGACAGAAACTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQATTLG*TETLPH
Trigger: ATGAGGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGCAAAACAATTCTCCTaGTGTTTTTCAGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: LIESCLSALSLWLVECHLAKQFS*CFSGVP
Trigger: AGGTACTCCTGAAAAACAGCAGGAGAATTGTTTTGC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCATCTGGAGGAAGCTTaGCGCTGTCAAGTAACTAAC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICHLEEA*RCQVTN
Trigger: GTTAGTTACTTGACAGCGGCAAGCTTCCTCCAGATG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCATCAGAAGGTTTCCCTTaGCAGCTGGGCGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSSEGFP*QLGGGL
Trigger: TAACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGA...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAACTACCACCCAAGCGTaGCACCACTCTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSTTTQA*HHSWLN
Trigger: GTTCAGCCAAGAGTGGTGGCACGCTTGGGTGGTAGT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCCTAGCACAACTGACTaGTTCCAAAACTACCACCCA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICPSTTD*FQNYHP
Trigger: TGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCTAGG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTAAATACCACTGGTGGTaGCTTGAAGCCCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPKYHWW*LEALSH
Trigger: ATGGGAAAGGGCTTCAAGGCACCACCAGTGGTATTT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAAGGCGTGAGCCACCATaGCTGGCCCCAAGTATGAAT +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSRREPP*LAPSMN
Trigger: ATTCATACTTGGGGCCAGGCATGGTGGCTCACGCCT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATTGGGGATAACACAGTaGTGGTTTCCAGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQLGITQ*WFPAPL
Trigger: TAGGGGTGCTGGAAACCAGCACTGTGTTATCCCCAA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTAGCAAAGCTTGCAGGTaGGTGTTTGCCAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSSKACR*VFAKGR
Trigger: CCTGCCTTTGGCAAACACGCACCTGCAAGCTTTGCT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCATAATTGTCCTTGCTaGCGCTGCTGGTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPHNCPC*RCWFSF
Trigger: GAAACTGAACCAGCAGCGCCAGCAAGGACAATTATG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCGGAAAATGTGGCCTTaGACAACAATGGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICRKMWP*TTMETS
Trigger: TGACGTCTCCATTGTTGTCCAAGGCCACATTTTCCG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATGTGCCCGGAAAATGTaGCCTTGGACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQCARKM*PWTTME
Trigger: CTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTACCATCTCTCAGTTCTTaGGCTTTGGGAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLPSLSS*ALGKSV
Trigger: TACTGATTTTCCCAAAGCCCAAGAACTGAGAGATGG...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCCCTCCTCCCCATCCTaGCTTGCCATTTCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIPSSPS*LAISVL
Trigger: GAGCACGGAAATGGCAAGCCAGGATGGGGAGGAGGG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCCCTCCTCCCCATCCTaGCTTGCCATTTCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFPSSPS*LAISVL
Trigger: GAGCACGGAAATGGCAAGCCAGGATGGGGAGGAGGG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGATACAGCTTGTCAGTaGCTGAGAATCCTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICDTACQ*LRILSG
Trigger: CCCACTTAGGATTCTCAGCCACTGACAAGCTGTATC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTCTGCCCTCTCACTCTaGTTGGTGGAGTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSSALSL*LVECHL
Trigger: AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGCGTGCCACCACTCTTaGCTGAACAGAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSACHHS*LNRNSS
Trigger: GGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAACCAAAAGCAAAAACCTaGACTCGTTGTGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQPKAKT*TRCDGA
Trigger: GGCGCCATCACAACGAGTCCAGGTTTTTGCTTTTGG...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCCTAAATCACAAAACTaGTGGCACAGGAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPPKSQN*WHRRDW
Trigger: CCAATCCCTCCTGTGCCACCAGTTTTGTGATTTAGG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTTCTGACTCTTGTGAGTaGAACTTTTCCCACACTGAC +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSSDSCE*NFSHTD
Trigger: GTCAGTGTGGGAAAAGTTTCACTCACAAGAGTCAGA...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGGGAAAGCAAACCAATaGGAAATACCTATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICGKANQ*EIPISG
Trigger: GCCAGAGATAGGTATTTCTCATTGGTTTGCTTTCCC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGGAAAGCAAACCAATaGGAAATACCTATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGKANQ*EIPISG
Trigger: GCCAGAGATAGGTATTTCTCATTGGTTTGCTTTCCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGTATCTCCCCCACCTTaGAAGAGTGTATTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPVSPPP*KSVFSR
Trigger: TCTTGAGAATACACTCTTTCAAGGTGGGGGAGATAC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTATCTACATTTAGTAGCTaGTGGACACATAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLSTFSS*WTHKAF
Trigger: GAAAGCCTTATGTGTCCATCAGCTACTAAATGTAGA...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTCTACATTTAGTAGCTaGTGGACACATAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLSTFSS*WTHKAF
Trigger: GAAAGCCTTATGTGTCCATCAGCTACTAAATGTAGA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATCTGGTCACAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNLVTNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGTGACCAG...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTAATCACATTGACTTCTaGCAAGGGCTCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSNHIDF*QGLSAH
Trigger: GTGAGCGCTGAGCCCTTGGCAGAAGTCAATGTGATT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAATCACATAATTGTCCTTaGTGGCGCTGCTGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQSHNCP*WRCWFS
Trigger: ACTGAACCAGCAGCGCCAGCAAGGACAATTATGTGA...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCATTATAACTACTGCTaGTTGGTGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICHYNYC*LVTGGH
Trigger: GTGACCACCAGTCACCAAGCAGCAGTAGTTATAATG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGGCCATTATAACTACTaGTGCTTGGTGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQGHYNY*CLVTGG
Trigger: ACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCTGGGCAGGTATTCGTaGTCGGTGAGCTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFLGRYS*SVSWDD
Trigger: GTCATCCCAGCTCACCGAGCACGAATACCTGCCCAG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGCTCTGTGGACGAGTTaGTGGGCAGGTATTCGTGCT +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNALWTS*WAGIRA
Trigger: AGCACGAATACCTGCCCAGCAACTCGTCCACAGAGC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGTGCTCAGGCGGTCATaGTCTGTGGACGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRVLRRS*SVDELL
Trigger: CAGCAACTCGTCCACAGAGCATGACCGCCTGAGCAC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGAAGGCTGCACCGTGTaGTCTGTCTGCACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFEGCTV*SVCTVL
Trigger: CAACACCGTGCAGACAGAGCACACGGTGCAGCCTTC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGCAGCCTCCTGTCTGTaGCCAATTAGATTCCCATCT +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSAASCL*PIRFPS
Trigger: AGATGGGAATCTAATTGGGCACAGACAGGAGGCTGC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTCCACATAAACCTCTTTaGACAGATATTACACTCATA +
Preference number: 4 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAPHKPL*TDITLI
Trigger: TATGAGTGTAATATCTGTGCAAAGAGGTTTATGTGG...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTATTCTGCTCAGCCTTTaGAGCTTCGTAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICILLSL*SFVGLS
Trigger: ACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAAT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTAGAATCAGAGGCCATTaGCAGCAATGTCTATTACAT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLRIRGH*QQCLLH
Trigger: ATGTAATAGACATTGCTGGCAATGGCCTCTGATTCT...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAAGAATCAGAGGCCATTaGCAGCAATGTCTATTACAT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLRIRGH*QQCLLH
Trigger: ATGTAATAGACATTGCTGGCAATGGCCTCTGATTCT...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAACCTAGCACAACTGACTaGTTCCAAAACTACCACCCA +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQPSTTD*FQNYHP
Trigger: TGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCTAGG...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGCAACCCCCTTCTCCTaGCTCTCTGAACATGGCCAG +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRATPFS*LSEHGQ
Trigger: CTGGCCATGTTCAGAGAGGCAGGAGAAGGGGGTTGC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGCAACCCCCTTCTCCTaGCTCTCTGAACATGGCCAG +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIATPFS*LSEHGQ
Trigger: CTGGCCATGTTCAGAGAGGCAGGAGAAGGGGGTTGC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAACAGCTTTGCAGCTTCTaGTCCGTCTCAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQQLCSF*SVSNSL
Trigger: GAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTG...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTCCTTGCTGGCGCTGCTaGTTCAGTTTCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSPCWRC*FSFCRM
Trigger: CATTCTACAGAAACTGAACCAGCAGCGCCAGCAAGG...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGGCCTTGGACAACAATaGAGACGTCACATAATTGTC +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSGLGQQ*RRHIIV
Trigger: GACAATTATGTGACGTCTCCATTGTTGTCCAAGGCC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTAAAAGTAGGGTGAACTaGCAGCAAGAACGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICKSRVN*QQERLC
Trigger: ACAAAGCCGTTCTTGCTGCCAGTTCACCCTACTTTT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCTGTGGACGAGTTGCTaGGCAGGTATTCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFLWTSC*AGIRAR
Trigger: CCGAGCACGAATACCTGCCCAGCAACTCGTCCACAG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCCCTCCTCCCCATCCTaGCTTGCCATTTCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIPSSPS*LAISVL
Trigger: GAGCACGGAAATGGCAAGCCAGGATGGGGAGGAGGG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTGGGCTTGCTGTACATaGGCCGGGTGTAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNWACCT*AGCSGT
Trigger: AGTTCCACTACACCCGGCCCATGTACAGCAAGCCCA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTTCTTCTCCCCGATGTaGAAGTCCTCCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNFFSPM*KSSSTP
Trigger: GGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGATACAGCTTGTCAGTaGCTGAGAATCCTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQDTACQ*LRILSG
Trigger: CCCACTTAGGATTCTCAGCCACTGACAAGCTGTATC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTGCTGCCACCCAAAATaGAACTGGTGGGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNCCHPK*NWWVES
Trigger: GGACTCCACCCACCAGTTCCATTTTGGGTGGCAGCA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACAGCCCGTGGTACCGTaGTCAGTCACAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLQPVVP*SVTAAW
Trigger: CCAAGCTGCTGTGACTGACCACGGTACCACGGGCTG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATCTCACTCTGGTTGGTaGAGTGTCACCTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWASHSGW*SVTLAL
Trigger: GAGTGCTAAGGTGACACTCCACCAACCAGAGTGAGA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCACCCTCTCACTCTGGTTaGTGGAGTGTCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSPSHSG*WSVTLA
Trigger: TGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGG...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAAATATTAAATACCACTaGTGGTGCCTTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLNIKYH*WCLEAL
Trigger: AAGGGCTTCAAGGCACCACCAGTGGTATTTAATATT...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTCAAGGAGGGAGCCCTaGAGGCTAAGCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSRREP*RLSSFP
Trigger: GGGAAAGCTGCTTAGCCTCCAGGGCTCCCTCCTTGA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCACTCCACAGCAGCTTaGGGGTGTGTGAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFHSTAA*GCVSLS
Trigger: TGAGAGGCTCACACACCCCCAAGCTGCTGTGGAGTG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGGGATAACACAGTGCTaGTTTCCAGCACCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQGITQC*FPAPLN
Trigger: ATTTAGGGGTGCTGGAAACCAGCACTGTGTTATCCC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTTCTGGACGAAACATTaGGAACCTCACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLFWTKH*EPHKRK
Trigger: TTTCCTTTTGTGAGGTTCCCAATGTTTCGTCCAGAA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATAAGTCCTCTAGCCTATaGGCCCCACTGGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNKSSSL*APLGKG
Trigger: TCCCTTACCCAGTGGGGCCCATAGGCTAGAGGACTT...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373457.1
3UTR CAA 72 bp AGCTCAGTGTACCCTCTAAAGAGTATCTCCCCCACCTaGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVYPLKSISPT*KECILKILLGQ
Trigger: CTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTTAGAGGGTACACTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp TGCTCTGCTAATACCATGGGAGAGGGTGATCAGTTTTaGGCAGAACAAAATGGCATCACCACCTTAGTACTG +
Preference number: 4 (lower is better)
Translates to: CSANTMGEGDQF*AEQNGITTLVL
Trigger: CAGTACTAAGGTGGTGATGCCATTTTGTTCTGCCAAAAACTGATCACCCTCTCCCATGGTATTAGCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTTGGGAAAATCAGTATaGCCCCCAGAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNLGKSV*PPEPSS
Trigger: TGAGCTGGGCTCTGGGGGTCATACTGATTTTCCCAA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATACCATGGGAGAGGGTaGTCAGTTTTTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAYHGRG*SVFGRT
Trigger: TGTTCTGCCAAAAACTGATCACCCTCTCCCATGGTA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGTAAATAGTCTTCAATaGGAAACAGGACATCAAACC +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLVNSLQ*ETGHQT
Trigger: GGTTTGATGTCCTGTTTCTCATTGAAGACTATTTAC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTAAACCCTGGTTTCACTaGACAAAAGTTAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSKPWFH*TKVSHP
Trigger: TGGGTGACTAACTTTTGTTCAGTGAAACCAGGGTTT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAAAGAACGGCTTTGTGTaGCCGGAAAATGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSKNGFV*PENVAL
Trigger: CAAGGCCACATTTTCCGGGCACACAAAGCCGTTCTT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAACATTTGTCTACCACATaGCACATCTGGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQHLSTT*HIWRKL
Trigger: AAGCTTCCTCCAGATGTGGCATGTGGTAGACAAATG...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAGTGCTCAGGCGGTCATaGTCTGTGGACGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLVLRRS*SVDELL
Trigger: CAGCAACTCGTCCACAGAGCATGACCGCCTGAGCAC...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCTCGCGTGCACATCCATaGCCTCGCAAGCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFSRAHP*PRKPVL
Trigger: TAGAACAGGCTTGCGAGGGCATGGATGTGCACGCGA...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATACCGTGTGCTCTGTCTaGACGGTGTTGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNTVCSV*TVLMDS
Trigger: AGAGTCCATCAACACCGTGCAGACAGAGCACACGGT...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCAAACAGGCAGAAAATaGTCTGCTAATACCATGGGA +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPQTGRK*SANTMG
Trigger: TCCCATGGTATTAGCAGAGCATTTTCTGCCTGTTTG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTCTCTCAGACTTCTCCTaGAATGTCCTAATGATCATG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSLSDFS*NVLMIM
Trigger: CATGATCATTAGGACATTGCAGGAGAAGTCTGAGAG...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAACAGATTCAGCCTGTaGCTTCAGCCCCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLINRFSL*LQPPET
Trigger: CGTTTCCGGGGGCTGAAGGCACAGGCTGAATCTGTT...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGGCCTTGGACAACAATaGAGACGTCACATAATTGTC +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQGLGQQ*RRHIIV
Trigger: GACAATTATGTGACGTCTCCATTGTTGTCCAAGGCC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTCGTGCTCGGTGAGCTaGGATGACAGCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLISCSVS*DDSSSL
Trigger: CAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCTCGTGCTCGGTGAGCTaGGATGACAGCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFSCSVS*DDSSSL
Trigger: CAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGA...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTTCTTCTCCCCGATGTaGAAGTCCTCCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIFFSPM*KSSSTP
Trigger: GGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTATAATGTGGGAGCATaGTTCTGTAGACTACCTTGC +
Preference number: 4 (lower is better)
Translates to: HYADFSRTEGPRLSQNICYNVGA*FCRLPC
Trigger: GCAAGGTAGTCTACAGAACCATGCTCCCACATTATA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGTCGGCGTAGCTTTGTaGACTTTTAAGTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSVGVAL*TFKFKQ
Trigger: CTGCTTAAACTTAAAAGTCCACAAAGCTACGCCGAC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAGCTCTGCTAATACCATaGGAGAGGGTGATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQALLIP*ERVISF
Trigger: AAAACTGATCACCCTCTCCCATGGTATTAGCAGAGC...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAGCAGCTTTCCCCGGTaGTTAGAAGCCAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSSFPR*LEASLR
Trigger: CCTAAGGCTGGCTTCTAACCACCGGGGAAAGCTGCT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACACTCCACAGCAGCTTaGGGGTGTGTGAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLHSTAA*GCVSLS
Trigger: TGAGAGGCTCACACACCCCCAAGCTGCTGTGGAGTG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCATCAAATGGTTTTGTaGCCTAAGAGTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPHQMVL*PKSHLT
Trigger: AGTCAGGTGACTCTTAGGCCACAAAACCATTTGATG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTGGATCCAGCGTTTGTaGGCCATGATGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIWIQRL*AMMLGL
Trigger: CAAGCCCAGCATCATGGCTCACAAACGCTGGATCCA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATCTGACTCTTGTGAGTaGAACTTTTCCCACACTGAC +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWASDSCE*NFSHTD
Trigger: GTCAGTGTGGGAAAAGTTTCACTCACAAGAGTCAGA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGATGGTGCTTCATTTTaGATTTCTTACCGCAGACCC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSDGASF*ISYRRP
Trigger: GGGTCTGCGGTAAGAAATTCAAAATGAAGCACCATC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACACCTTAGCACTCTATaGACTACTCAAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAHLSTL*TTQVHR
Trigger: CCTGTGAACTTGAGTAGTTCATAGAGTGCTAAGGTG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCACGATTGTGGAAAAGATaGCATGGTAGTAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSRLWKR*HGSSTL
Trigger: CAGGGTGCTACTACCATGTCATCTTTTCCACAATCG...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGCTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRLVLGA*ESEAIA
Trigger: GGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAG...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGCCTGGCCCCAAGTATaGATATTAAATACCACTGGT +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAAWPQV*ILNTTG
Trigger: ACCAGTGGTATTTAATATTCATACTTGGGGCCAGGC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGCAAAACAATTCTCCTaGTGTTTTTCAGGAGTACCT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSAKQFS*CFSGVP
Trigger: AGGTACTCCTGAAAAACAGCAGGAGAATTGTTTTGC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACATTTGTCTACCACATaGCACATCTGGAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAHLSTT*HIWRKL
Trigger: AAGCTTCCTCCAGATGTGGCATGTGGTAGACAAATG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTCGCGTGCACATCCATaGCCTCGCAAGCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSISRAHP*PRKPVL
Trigger: TAGAACAGGCTTGCGAGGGCATGGATGTGCACGCGA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCCTGCTCATCATAATTaGTTTCATCAGCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPPAHHN*FHQPVH
Trigger: ATGAACAGGCTGATGAAAGCAATTATGATGAGCAGG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAATTCTGCTCAGCCTTTaGAGCTTCGTAGGACTTAGT +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAILLSL*SFVGLS
Trigger: ACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAAT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGAGTCCAGTTCCAAGTaGAGGTGTCTCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFESSSK*RCLCPP
Trigger: AGGTGGACAGAGACACCTGCACTTGGAACTGGACTC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGAGTCCAGTTCCAAGTaGAGGTGTCTCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRESSSK*RCLCPP
Trigger: AGGTGGACAGAGACACCTGCACTTGGAACTGGACTC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTAGAATCAGAGGCCATTaGCAGCAATGTCTATTACAT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPRIRGH*QQCLLH
Trigger: ATGTAATAGACATTGCTGGCAATGGCCTCTGATTCT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAACAAACAGGCAGAAAATaGTCTGCTAATACCATGGGA +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQQTGRK*SANTMG
Trigger: TCCCATGGTATTAGCAGAGCATTTTCTGCCTGTTTG...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTTGCAGGTGCGTGTTTaGCAAAGGCAGGACTCACCA +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLILQVRV*QRQDSP
Trigger: TGGTGAGTCCTGCCTTTGGCAAACACGCACCTGCAA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTGTGCCCGGAAAATGTaGCCTTGGACAACAATGGAG +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNCARKM*PWTTME
Trigger: CTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTCGTGCTCGGTGAGCTaGGATGACAGCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSISCSVS*DDSSSL
Trigger: CAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCACTCAGCCACAACTTGTaGCTCCTTCTCACTAAGTGT +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSLSHNL*LLLTKC
Trigger: ACACTTAGTGAGAAGGAGCCACAAGTTGTGGCTGAG...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCTCTGCCCTCTCACTCTaGTTGGTGGAGTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFSALSL*LVECHL
Trigger: AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGA...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATAAATGCCCACTAGAATaGAGGGGATCCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNKCPLE*RGSLWA
Trigger: TGCCCAAAGGGATCCCCTCCATTCTAGTGGGCATTT...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTTTCTGGACGAAACATTaGGAACCTCACAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPFWTKH*EPHKRK
Trigger: TTTCCTTTTGTGAGGTTCCCAATGTTTCGTCCAGAA...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTAATAAAGTACTTTTCTaGACGAAACATTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLNKVLF*TKHWEP
Trigger: AGGTTCCCAATGTTTCGTCCAGAAAAGTACTTTATT...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp CAATGTTCAACAAGTAAACACCCTGGTGTTAGGAGCTaGAGAATCAGAGGCCATTGCCAGCAATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: QCSTSKHPGVRS*RIRGHCQQCLL
Trigger: TAATAGACATTGCTGGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGGGTGTTTACTTGTTGAACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTTGGGAAAATCAGTATaGCCCCCAGAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSILGKSV*PPEPSS
Trigger: TGAGCTGGGCTCTGGGGGTCATACTGATTTTCCCAA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGGCTTTATGCCTGTGTaGATTTTCATGTGGCCCACG +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFGFMPV*IFMWPT
Trigger: CGTGGGCCACATGAAAATTCACACAGGCATAAAGCC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAGTATCTCCCCCACCTTaGAAGAGTGTATTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSVSPPP*KSVFSR
Trigger: TCTTGAGAATACACTCTTTCAAGGTGGGGGAGATAC...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATCGATTGTGGAAAAGATaGCATGGTAGTAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNRLWKR*HGSSTL
Trigger: CAGGGTGCTACTACCATGTCATCTTTTCCACAATCG...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACTGGTGTTAGGAGCTTaGGAATCAGAGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLLVLGA*ESEAIA
Trigger: GGCAATGGCCTCTGATTCTCAAGCTCCTAACACCAG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGCCACCACTCTTGGCTaGACAGAAACTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIATTLG*TETLPH
Trigger: ATGAGGAAGAGTTTCTGTTCAGCCAAGAGTGGTGGC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTACTCATACGGCTTTATaGCTGTGTGAATTTTCATGT +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSTHTAL*LCEFSC
Trigger: ACATGAAAATTCACACAGGCATAAAGCCGTATGAGT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTACTCATACGGCTTTATaGCTGTGTGAATTTTCATGT +
Preference number: 4 (lower is better)
Translates to: PTLKECILKILLGQFCPPTHTAL*LCEFSC
Trigger: ACATGAAAATTCACACAGGCATAAAGCCGTATGAGT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCAGAATCCTGCCTATCTaGCCTCTCACTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFRILPI*PLTLVG
Trigger: ACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCT...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAGAATCCTGCCTATCTaGCCTCTCACTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRRILPI*PLTLVG
Trigger: ACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCCACTCATAGAATCCTaGCTATCTGCCCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIPLIES*LSALSL
Trigger: GAGTGAGAGGGCAGATAGGCAGGATTCTATGAGTGG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACCATCTCTCAGTTCTTaGGCTTTGGGAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAPSLSS*ALGKSV
Trigger: TACTGATTTTCCCAAAGCCCAAGAACTGAGAGATGG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGCCAAAATGGAACTGGTaGGTGGAGTCCAGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRPKWNW*VESSSK
Trigger: CTTGGAACTGGACTCCACCCACCAGTTCCATTTTGG...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACACCCAAAATGGAACTaGTGGGTGGAGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLHPKWN*WVESSS
Trigger: GGAACTGGACTCCACCCACCAGTTCCATTTTGGGTG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTAGAAATACCTATCTCTaGCACCCTAGAGAATTACAA +
Preference number: 4 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSRNTYL*HPRELQ
Trigger: TTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCCCTCTCACTCTGGTTaGTGGAGTGTCACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIPSHSG*WSVTLA
Trigger: TGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTATAATGTGGGAGCATaGTTCTGTAGACTACCTTGC +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSYNVGA*FCRLPC
Trigger: GCAAGGTAGTCTACAGAACCATGCTCCCACATTATA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGTCGGCGTAGCTTTGTaGACTTTTAAGTTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSVGVAL*TFKFKQ
Trigger: CTGCTTAAACTTAAAAGTCCACAAAGCTACGCCGAC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTATGCACTTCACCACGTaGATTACTGTAACGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSMHFTT*ITVTCV
Trigger: TACACACGTTACAGTAATCCACGTGGTGAAGTGCAT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp CCCACTGTATGGAGGCTACAATTAACCAAACAGGATTaGGGAAAGCAAACCAATGAGAAATACCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: PTVWRLQLTKQD*GKQTNEKYLSL
Trigger: CAGAGATAGGTATTTCTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAAAACTTTTCCCACACTaGCAAGGATACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSKLFPH*QGYSLS
Trigger: TGACAAGCTGTATCCTTGTCAGTGTGGGAAAAGTTT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGATGGTGCTTCATTTTaGATTTCTTACCGCAGACCC +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNDGASF*ISYRRP
Trigger: GGGTCTGCGGTAAGAAATTCAAAATGAAGCACCATC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAAAGAACGGCTTTGTGTaGCCGGAAAATGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLKNGFV*PENVAL
Trigger: CAAGGCCACATTTTCCGGGCACACAAAGCCGTTCTT...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGTGACTGGTGGTCACTaGCATGATTTAGCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIVTGGH*HDLASD
Trigger: GTCAGAAGCTAAATCATGGCAGTGACCACCAGTCAC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGTGACTGGTGGTCACTaGCATGATTTAGCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRVTGGH*HDLASD
Trigger: GTCAGAAGCTAAATCATGGCAGTGACCACCAGTCAC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTGGCCATTATAACTACTaGTGCTTGGTGACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIGHYNY*CLVTGG
Trigger: ACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCC...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCGTGATCCAAAGCTGCTaGCACCCAAAATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIVIQSC*HPKWNW
Trigger: CCAGTTCCATTTTGGGTGGCAGCAGCTTTGGATCAC...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACCACTCATAGAATCCTaGCTATCTGCCCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLPLIES*LSALSL
Trigger: GAGTGAGAGGGCAGATAGGCAGGATTCTATGAGTGG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCAGCTTTGCAGCTTCTaGTCCGTCTCAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFQLCSF*SVSNSL
Trigger: GAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGCATAATTGTCCTTGCTaGCGCTGCTGGTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRHNCPC*RCWFSF
Trigger: GAAACTGAACCAGCAGCGCCAGCAAGGACAATTATG...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAAGAAATACCTATCTCTaGCACCCTAGAGAATTACAA +
Preference number: 4 (lower is better)
Translates to: PHCMEATINQTGFGKANQRNTYL*HPRELQ
Trigger: TTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCT...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCTCAGCCACAACTTGTaGCTCCTTCTCACTAAGTGT +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFLSHNL*LLLTKC
Trigger: ACACTTAGTGAGAAGGAGCCACAAGTTGTGGCTGAG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTCTCACTCTGGTTGGTaGAGTGTCACCTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSISHSGW*SVTLAL
Trigger: GAGTGCTAAGGTGACACTCCACCAACCAGAGTGAGA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAGCATCTTACAGAAACTaGCAAGGGCACTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLASYRN*QGHYVS
Trigger: GCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATGC...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTACCATGGGAGAGGGTaGTCAGTTTTTGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIYHGRG*SVFGRT
Trigger: TGTTCTGCCAAAAACTGATCACCCTCTCCCATGGTA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGCCTGGCCCCAAGTATaGATATTAAATACCACTGGT +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRAWPQV*ILNTTG
Trigger: ACCAGTGGTATTTAATATTCATACTTGGGGCCAGGC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACATCTGGAGGAAGCTTaGCGCTGTCAAGTAACTAAC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLHLEEA*RCQVTN
Trigger: GTTAGTTACTTGACAGCGGCAAGCTTCCTCCAGATG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCATGGCCCACGAGATGGTaGTTCATTTTGAATTTCTTA +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSWPTRW*FILNFL
Trigger: TAAGAAATTCAAAATGAAGCACCATCTCGTGGGCCA...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAACTCATACGGCTTTATaGCTGTGTGAATTTTCATGT +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWATHTAL*LCEFSC
Trigger: ACATGAAAATTCACACAGGCATAAAGCCGTATGAGT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCAAATACCACTGGTGGTaGCTTGAAGCCCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIKYHWW*LEALSH
Trigger: ATGGGAAAGGGCTTCAAGGCACCACCAGTGGTATTT...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAAAATACCACTGGTGGTaGCTTGAAGCCCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLKYHWW*LEALSH
Trigger: ATGGGAAAGGGCTTCAAGGCACCACCAGTGGTATTT...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACGGAAAATGTGGCCTTaGACAACAATGGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLRKMWP*TTMETS
Trigger: TGACGTCTCCATTGTTGTCCAAGGCCACATTTTCCG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp GAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACCACTCATAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: ERVYSQDSSWAV*SPLSITTHRIL
Trigger: CAGGATTCTATGAGTGGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAAACTTTTCCCACACTaGCAAGGATACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRKLFPH*QGYSLS
Trigger: TGACAAGCTGTATCCTTGTCAGTGTGGGAAAAGTTT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCAAACTTTTCCCACACTaGCAAGGATACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFKLFPH*QGYSLS
Trigger: TGACAAGCTGTATCCTTGTCAGTGTGGGAAAAGTTT...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCACCTTAGCACTCTATaGACTACTCAAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIHLSTL*TTQVHR
Trigger: CCTGTGAACTTGAGTAGTTCATAGAGTGCTAAGGTG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAGTAAATAGTCTTCAATaGGAAACAGGACATCAAACC +
Preference number: 4 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSVNSLQ*ETGHQT
Trigger: GGTTTGATGTCCTGTTTCTCATTGAAGACTATTTAC...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGCCTCTAAAACTTCAGTaGATTTGTCTACCACATGCC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRPLKLQ*ICLPHA
Trigger: GGCATGTGGTAGACAAATGCACTGAAGTTTTAGAGG...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACATTATAACTACTGCTaGTTGGTGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLHYNYC*LVTGGH
Trigger: GTGACCACCAGTCACCAAGCAGCAGTAGTTATAATG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCACCACATAAACCTCTTTaGACAGATATTACACTCATA +
Preference number: 4 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAPHKPL*TDITLI
Trigger: TATGAGTGTAATATCTGTGCAAAGAGGTTTATGTGG...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGATGTGGCCCACGAGATaGTGCTTCATTTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRMWPTR*CFILNF
Trigger: GAAATTCAAAATGAAGCACCATCTCGTGGGCCACAT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGAAGACCCCACTGTATaGAGGCTACAATTAACCAAA +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFEDPTV*RLQLTK
Trigger: TTTGGTTAATTGTAGCCTCCATACAGTGGGGTCTTC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATAATATTAAATACCACTaGTGGTGCCTTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: EAIASNVYYITAKPNFSNNIKYH*WCLEAL
Trigger: AAGGGCTTCAAGGCACCACCAGTGGTATTTAATATT...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCATGCACTTCACCACGTaGATTACTGTAACGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFMHFTT*ITVTCV
Trigger: TACACACGTTACAGTAATCCACGTGGTGAAGTGCAT...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTCATCAAATGGTTTTGTaGCCTAAGAGTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIHQMVL*PKSHLT
Trigger: AGTCAGGTGACTCTTAGGCCACAAAACCATTTGATG...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTTGGTTCTGTGTCTGTaGGTAAGAGAACTGAATCCA +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRLVLCL*VRELNP
Trigger: TGGATTCAGTTCTCTTACCCACAGACACAGAACCAA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR TCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAAATTAAAATCACATTaGCTTCTGCCAAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRKLKSH*LLPRAQ
Trigger: CTGAGCCCTTGGCAGAAGTCAATGTGATTTTAATTT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAAAACCCTGGTTTCACTaGACAAAAGTTAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLKPWFH*TKVSHP
Trigger: TGGGTGACTAACTTTTGTTCAGTGAAACCAGGGTTT...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCCTCTAAAACTTCAGTaGATTTGTCTACCACATGCC +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIPLKLQ*ICLPHA
Trigger: GGCATGTGGTAGACAAATGCACTGAAGTTTTAGAGG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIHSLFL*MPLKGQ
Trigger: CTGGCCCTTGAGTGGCATGCACAAAAATAAACTATG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCAAACAGGCAGAAAATaGTCTGCTAATACCATGGGA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIQTGRK*SANTMG
Trigger: TCCCATGGTATTAGCAGAGCATTTTCTGCCTGTTTG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCTCTCAGACTTCTCCTaGAATGTCCTAATGATCATG +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSILSDFS*NVLMIM
Trigger: CATGATCATTAGGACATTGCAGGAGAAGTCTGAGAG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCCATCTCTCAGTTCTTaGGCTTTGGGAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIPSLSS*ALGKSV
Trigger: TACTGATTTTCCCAAAGCCCAAGAACTGAGAGATGG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAATATTAAATACCACTaGTGGTGCCTTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLINIKYH*WCLEAL
Trigger: AAGGGCTTCAAGGCACCACCAGTGGTATTTAATATT...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTATCTACATTTAGTAGCTaGTGGACACATAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLSTFSS*WTHKAF
Trigger: GAAAGCCTTATGTGTCCATCAGCTACTAAATGTAGA...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCAAAGCTATATTGAGGTaGAGAGAAGAGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: VITSGMLHSLKACAILPFKAILR*REETIP
Trigger: AGGAATAGTCTCTTCTCTTCACCTCAATATAGCTTT...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTGGCCCACGAGATGGTaGTTCATTTTGAATTTCTTA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIWPTRW*FILNFL
Trigger: TAAGAAATTCAAAATGAAGCACCATCTCGTGGGCCA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGAAATACCTATCTCTaGCACCCTAGAGAATTACAA +
Preference number: 4 (lower is better)
Translates to: VIPERLFEQCYPQPSKLIRNTYL*HPRELQ
Trigger: TTGTAATTCTCTAGGGTGCCAGAGATAGGTATTTCT...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTTTGGCAGAACAAAATaGCATCACCACCTTAGTACT +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIFGRTK*HHHLST
Trigger: AGTACTAAGGTGGTGATGCCATTTTGTTCTGCCAAA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR TCA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAGTAAATAGTCTTCAATaGGAAACAGGACATCAAACC +
Preference number: 4 (lower is better)
Translates to: RQQSSVNQFLILGITLFLVNSLQ*ETGHQT
Trigger: GGTTTGATGTCCTGTTTCTCATTGAAGACTATTTAC...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CCA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAATAAAGTACTTTTCTaGACGAAACATTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRNKVLF*TKHWEP
Trigger: AGGTTCCCAATGTTTCGTCCAGAAAAGTACTTTATT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
3UTR CAA 72 bp CATCTTACAGAAACTGACAAGGGCACTATGTCAGCCTaGTACCGTAAATTATCTGTTTCATATTTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HLTETDKGTMSA*YRKLSVSYLES
Trigger: ACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGCTGACATAGTGCCCTTGTCAGTTTCTGTAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR GCA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCCCACATAAACCTCTTTaGACAGATATTACACTCATA +
Preference number: 4 (lower is better)
Translates to: ALYRKLSVSYLESHSLSIPHKPL*TDITLI
Trigger: TATGAGTGTAATATCTGTGCAAAGAGGTTTATGTGG...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp GCTTGCTGTACATGGGCCGGGTGTAGTGGAACTCGGCGCTGTCGCTaGCGCCCTCCTCCCCATCCTGGCTTGCCATTTCCGTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ACCTWAGCSGTRRCR*RPPPHPGLPFPCSG
Trigger: GCCTGAGCACGGAAATGGCAAGCCAGGATGGGGAGGAGGGCGCCAGCGACAGCGCCGAGTTCCACTACACCCGGCCCATGTACAGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 90 bp TGCCAAGGGCTCAGCGCTCACATCCCCCGCCCAAGATATCCTCTCTaGCGCCGGCGCAGGCCTGTTGTAGCCTCAGCTGCCGCAACAGAT +
Preference number: 5 (lower is better)
Translates to: CQGLSAHIPRPRYPL*RRRRPVVASAAATD
Trigger: ATCTGTTGCGGCAGCTGAGGCTACAACAGGCCTGCGCCGGCGGCAGAGAGGATATCTTGGGCGGGGGATGTGAGCGCTGAGCCCTTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS GCA 90 bp CCCTCCTCCCCATCCTGGCTTGCCATTTCCGTGCTCAGGCGGTCATaGTCTGTGGACGAGTTGCTGGGCAGGTATTCGTGCTCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PSSPSWLAISVLRRS*SVDELLGRYSCSVS
Trigger: GCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCCAGGATGGGGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 90 bp TCCCCGATGTGGAAGTCCTCCTCCACTCCCGAAGGCTGCACCGTGTaGTCTGTCTGCACGGTGTTGATGGACTCTGTGACCTGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SPMWKSSSTPEGCTV*SVCTVLMDSVTWCS
Trigger: CGAGCACCAGGTCACAGAGTCCATCAACACCGTGCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCACATCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS TCA 90 bp GTTCTAAGCGCTCGGGCTTCACGTGGATCCAGCGTTTGTGAGCCATaGTGCTGGGCTTGCTGTACATGGGCCGGGTGTAGTGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: VLSARASRGSSVCEP*CWACCTWAGCSGTR
Trigger: CCGAGTTCCACTACACCCGGCCCATGTACAGCAAGCCCAGCATCATGGCTCACAAACGCTGGATCCACGTGAAGCCCGAGCGCTTAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 90 bp CTCAGGCGGTCATGCTCTGTGGACGAGTTGCTGGGCAGGTATTCGTaGTCGGTGAGCTGGGATGACAGCTCGTCTTTGGTGCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LRRSCSVDELLGRYS*SVSWDDSSSLVLSS
Trigger: AGAGGAGAGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 90 bp ACTTTCTTCTCCCCGATGTGGAAGTCCTCCTCCACTCCCGAAGGCTaGACCGTGTGCTCTGTCTGCACGGTGTTGATGGACTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: TFFSPMWKSSSTPEG*TVCSVCTVLMDSVT
Trigger: GGTCACAGAGTCCATCAACACCGTGCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACCTCCCCATCCTGGCTaGCCATTTCCGTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGPPHPG*PFPCSG
Trigger: GCCTGAGCACGGAAATGGCAAGCCAGGATGGGGAGG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCGCCATGATGCTGGGCTaGCTGTACATGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: IPFPRESTALQLLLRLKFAMMLG*LYMGRV
Trigger: CACCCGGCCCATGTACAGCAAGCCCAGCATCATGGC...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp TCAGCCTGTTCATCAAACTCAGCTTCCACTTTCTTCTCCCCGATGTaGAAGTCCTCCTCCACTCCCGAAGGCTGCACCGTGTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SACSSNSASTFFSPM*KSSSTPEGCTVCSV
Trigger: GACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAAAGTGGAAGCTGAGTTTGATGAACAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTACCACTGGTGGTGCCTaGAAGCCCTTTCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: LIESCLSALSLWLVECHLTTGGA*KPFPMG
Trigger: CCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGGT...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS TCA 90 bp GGTCATGCTCTGTGGACGAGTTGCTGGGCAGGTATTCGTGCTCGGTaGGCTGGGATGACAGCTCGTCTTTGGTGCTCTCCTCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: GHALWTSCWAGIRAR*AGMTARLWCSPLHF
Trigger: AAAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp TGCTCTGTGGACGAGTTGCTGGGCAGGTATTCGTGCTCGGTGAGCTaGGATGACAGCTCGTCTTTGGTGCTCTCCTCTTCATTTTCACCA +
Preference number: 5 (lower is better)
Translates to: CSVDELLGRYSCSVS*DDSSSLVLSSSFSP
Trigger: TGGTGAAAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGCAGCAAGAACGGCTTaGTGTGCCCGGAAAATGTGG +
Preference number: 5 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAAARTA*CARKMW
Trigger: CCACATTTTCCGGGCACACAAAGCCGTTCTTGCTGC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLVRRFP*PAGRWV
Trigger: AACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGAC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: STTDCFQNYHPSVPPLLAVSHSS*VSTSHR
Trigger: TCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGAC...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAACCACTGGTGGTGCCTaGAAGCCCTTTCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLTTGGA*KPFPMG
Trigger: CCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGGT...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAAGGGAAAGCACAGCTTaGCAGCTTCTGCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGRESTA*QLLLRL
Trigger: GAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCT...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGTGGCACAGGAGGGATaGGGGATAACACAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LIESCLSALSLWLVECHLVAQEG*GITQCW
Trigger: CCAGCACTGTGTTATCCCCAATCCCTCCTGTGCCAC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTAGCGATTCTCCTGCCTaGGCCTCCCAAGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLSDSPA*ASQVAG
Trigger: CCCAGCTACTTGGGAGGCCAAGGCAGGAGAATCGCT...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTCCTCCCCATCCTGGCTaGCCATTTCCGTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPPPHPG*PFPCSG
Trigger: GCCTGAGCACGGAAATGGCAAGCCAGGATGGGGAGG...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTGCCATGATGCTGGGCTaGCTGTACATGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: HYADFSRTEGPRLSQNICAMMLG*LYMGRV
Trigger: CACCCGGCCCATGTACAGCAAGCCCAGCATCATGGC...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTTCTGTCTGCACGGTGTaGATGGACTCTGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LIESCLSALSLWLVECHLSVCTV*MDSVTW
Trigger: CCAGGTCACAGAGTCCATCAACACCGTGCAGACAGA...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTAGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 5 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCCTGGTGTTAGGAGCTaGAGAATCAGAGGCCATTGC +
Preference number: 5 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSPGVRS*RIRGHC
Trigger: GCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCACAACTGACTGCTTCCAAAACTACCACCCAAGCGTGCCACCACTCTTGGCTAGCGTGCCACCACTCTaGGCTGAACAGAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: STTDCFQNYHPSVPPLLASVPPL*AEQKLF
Trigger: GAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGCT...AGCCAAGAGTGGTGGCACGCTTGGGTGGTAGTTTTGGAAGCAGTCAGTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCAGCGTGCCACCACTCTaGGCTGAACAGAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: IPFPRESTALQLLLRLKFSVPPL*AEQKLF
Trigger: GAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGCT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTCCGGAAAATGTGGCCTaGGACAACAATGGAGACGTC +
Preference number: 5 (lower is better)
Translates to: LIESCLSALSLWLVECHLPENVA*DNNGDV
Trigger: GACGTCTCCATTGTTGTCCAAGGCCACATTTTCCGG...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTCTGTCTGCACGGTGTaGATGGACTCTGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLSVCTV*MDSVTW
Trigger: CCAGGTCACAGAGTCCATCAACACCGTGCAGACAGA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTAGATGGTGCTTCATTTaGAATTTCTTACCGCAGACC +
Preference number: 5 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTRWCFI*NFLPQT
Trigger: GGTCTGCGGTAAGAAATTCAAAATGAAGCACCATCT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTGGCACTATGTCAGCCTaGTACCGTAAATTATCTGTT +
Preference number: 5 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTGTMSA*YRKLSV
Trigger: AACAGATAATTTACGGTACAAGGCTGACATAGTGCC...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTACCACTGGTGGTGCCTaGAAGCCCTTTCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSTTGGA*KPFPMG
Trigger: CCCCATGGGAAAGGGCTTCAAGGCACCACCAGTGGT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTTATCATCAAATGGTTTaGTGGCCTAAGAGTCACCTG +
Preference number: 5 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTYHQMV*WPKSHL
Trigger: CAGGTGACTCTTAGGCCACAAAACCATTTGATGATA...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp ACAAGTTCCAAAGTTCCACAAAGTCCTCTAGCCTATGGGCCCCACTaGGTAAGGGATTCAATCCCTAGAGCAAAGCTTGCAGGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: TSSKVPQSPLAYGPH*VRDSIPRAKLAGAC
Trigger: ACACGCACCTGCAAGCTTTGCTCTAGGGATTGAATCCCTTACCCAGTGGGGCCCATAGGCTAGAGGACTTTGTGGAACTTTGGAACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCGATGACAGCTCGTCTTaGGTGCTCTCCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: IPFPRESTALQLLLRLKFDDSSS*VLSSSF
Trigger: AAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATC...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTACCTGGTGTTAGGAGCTaGAGAATCAGAGGCCATTGC +
Preference number: 5 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLPGVRS*RIRGHC
Trigger: GCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGG...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTTCCCTGAAAGATTGTTaGAACAATGTTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTSLKDC*NNVTHN
Trigger: GTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGA...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TTGCCAGCTGGGCGGTGGGTTAACTCACCCCATTACCCATTCCAGGCCAGGACTATTTCATCACAAATCTaGTTCGGTGCTAATGCAAAG +
Preference number: 5 (lower is better)
Translates to: LPAGRWVNSPHYPFQARTISSQI*FGANAK
Trigger: CTTTGCATTAGCACCGAACAAGATTTGTGATGAAAT...AGTCCTGGCCTGGAATGGGTAATGGGGTGAGTTAACCCACCGCCCAGCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR CAA 90 bp CTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCACTCCCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: LPQGKHSFAASAPSQIHSLPEKS*FQAPFH
Trigger: ATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAG...GGAGTGAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGCAGCAAGAACGGCTTaGTGTGCCCGGAAAATGTGG +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPAARTA*CARKMW
Trigger: CCACATTTTCCGGGCACACAAAGCCGTTCTTGCTGC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGAGGCTACAATTATATAACTACTGCTGCTaGGTGACTGGTGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: SLVSTSHREDPTVWRLQLYNYCC*VTGGHC
Trigger: GCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATA...TAATTGTAGCCTCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACTGGTCGGCGTAGCTTaGTGGACTTTTAAGTTTAAG +
Preference number: 5 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGLVGVA*WTFKFK
Trigger: CTTAAACTTAAAAGTCCACAAAGCTACGCCGACCAG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCCTTCCCCAGGGAAAGCACAGCTTTGCAGCTTCTGCTCCGTCTCAAATTCAAGGAGACAATAGGCTaGATTGTACAATCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: IPFPRESTALQLLLRLKFKETIG*IVQSPQ
Trigger: CTGAGGGGATTGTACAATCAAGCCTATTGTCTCCTT...GAATTTGAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCTGGGGAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTTGCCCAGGTTCGTCTaGAATTCCTGGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLLPRFV*NSWLQV
Trigger: CACTTGAAGCCAGGAATTCAAGACGAACCTGGGCAA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp CTCATAGAATCCTGCCTATCTGCCCTCTCACTCTGGTTGGTGGAGTGTCACCTTGTGGAACTCCTGATTTaGGTTCTGTGTCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LIESCLSALSLWLVECHLVELLI*VLCLWV
Trigger: TACCCACAGACACAGAACCAAAATCAGGAGTTCCAC...AAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGGATTCTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 90 bp CAGAGCCCAGCTCAAAGCTCTCTACCAGGCCATTATAACTACTGCTaGTTGGTGACTGGTGGTCACTGCCATGATTTAGCTTCTGACAAA +
Preference number: 5 (lower is better)
Translates to: QSPAQSSLPGHYNYC*LVTGGHCHDLASDK
Trigger: TTTGTCAGAAGCTAAATCATGGCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCCTGGTAGAGAGCTTTGAGCTGGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS-3UTR CAA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTCCGGAAAATGTGGCCTaGGACAACAATGGAGACGTC +
Preference number: 5 (lower is better)
Translates to: HYADFSRTEGPRLSQNICPENVA*DNNGDV
Trigger: GACGTCTCCATTGTTGTCCAAGGCCACATTTTCCGG...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 5 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTCCTGGTGTTAGGAGCTaGAGAATCAGAGGCCATTGC +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSPGVRS*RIRGHC
Trigger: GCAATGGCCTCTGATTCTCAAGCTCCTAACACCAGG...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TCAGTCACAGCAGCTTGGTGTCTACCAGCCACAGAGAAGACCCCACTGTATGGACAAATTAAAATCACATaGACTTCTGCCAAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SVTAAWCLPATEKTPLYGQIKIT*TSAKGS
Trigger: TGAGCCCTTGGCAGAAGTCAATGTGATTTTAATTTG...TCCATACAGTGGGGTCTTCTCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLLPEKS*FQAPFH
Trigger: ATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAG...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGCAGCAAGAACGGCTTaGTGTGCCCGGAAAATGTGG +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAAARTA*CARKMW
Trigger: CCACATTTTCCGGGCACACAAAGCCGTTCTTGCTGC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTTGTTCTCAAACACTCTaGGGTTCATCACATCAGGCA +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLCSQTL*GSSHQA
Trigger: TGCCTGATGTGATGAACCCAAGAGTGTTTGAGAACA...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTTATAACTACTGCTGCTaGGTGACTGGTGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSYNYCC*VTGGHC
Trigger: GCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATA...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNVRRFP*PAGRWV
Trigger: AACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGAC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTCAGTCACAGCAGCTaGGTGTCTACCAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAVSHSS*VSTSHR
Trigger: TCTGTGGCTGGTAGACACCAAGCTGCTGTGACTGAC...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTCAGGGGTCTCACTTTTaGCCCAGGTTCGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSQGSHF*PRFVLN
Trigger: ATTCAAGACGAACCTGGGCAAAAAGTGAGACCCCTG...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTAAAACTTCAGTGCATTaGTCTACCACATGCCACATC +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLKTSVH*STTCHI
Trigger: GATGTGGCATGTGGTAGACAAATGCACTGAAGTTTT...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACCTCCCCATCCTGGCTaGCCATTTCCGTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RQQSSVNQFLILGITLFLPPHPG*PFPCSG
Trigger: GCCTGAGCACGGAAATGGCAAGCCAGGATGGGGAGG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGTCAGAAGGTTTCCCTaGCCAGCTGGGCGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRVRRFP*PAGRWV
Trigger: AACCCACCGCCCAGCTGGCAAGGGAAACCTTCTGAC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TGCAGGTGTCTCTGTCCACCTGTTTCGATCACAACCAGTCAGAAGGTTTCCCTTGGCACTATGTCAGCCTaGTACCGTAAATTATCTGTT +
Preference number: 5 (lower is better)
Translates to: CRCLCPPVSITTSQKVSLGTMSA*YRKLSV
Trigger: AACAGATAATTTACGGTACAAGGCTGACATAGTGCC...AAGGGAAACCTTCTGACTGGTTGTGATCGAAACAGGTGGACAGAGACACCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAAGCGTGCCACCACTCTaGGCTGAACAGAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWASVPPL*AEQKLF
Trigger: GAAGAGTTTCTGTTCAGCCAAGAGTGGTGGCACGCT...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTATTTCATCACAAATCTaGTTCGGTGCTGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSISSQI*FGAAKG
Trigger: GCCCTTGGCAGCACCGAACAAGATTTGTGATGAAAT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449886.5
CDS-3UTR CAA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTTGTTCTCAAACACTCTaGGGTTCATCACATCAGGCA +
Preference number: 5 (lower is better)
Translates to: HYADFSRTEGPRLSQNICCSQTL*GSSHQA
Trigger: TGCCTGATGTGATGAACCCAAGAGTGTTTGAGAACA...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGCCCTCTCACTCTGGTaGGTGGAGTGTCACCTTAGC +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFALSLW*VECHLS
Trigger: GCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTAGTATCTCCCCCACCTaGAAAGAGTGTATTCTCAAG +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPSISPT*KECILK
Trigger: CTTGAGAATACACTCTTTCAAGGTGGGGGAGATACT...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTGAGAATCAGAGGCCATaGCCAGCAATGTCTATTACA +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPENQRP*PAMSIT
Trigger: TGTAATAGACATTGCTGGCAATGGCCTCTGATTCTC...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTAAGGAGACAATAGGCTaGATTGTACAATCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSKETIG*IVQSPQ
Trigger: CTGAGGGGATTGTACAATCAAGCCTATTGTCTCCTT...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp TATGAACTACTCAAGTTCACAGGGAACTCTCAGCCACAACTTGTGGCTCCTTCTGAGGGTGATCAGTTTTaGGCAGAACAAAATGGCATC +
Preference number: 5 (lower is better)
Translates to: YELLKFTGNSQPQLVAPSEGDQF*AEQNGI
Trigger: GATGCCATTTTGTTCTGCCAAAAACTGATCACCCTC...AGAAGGAGCCACAAGTTGTGGCTGAGAGTTCCCTGTGAACTTGAGTAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGTGGCACAGGAGGGATaGGGGATAACACAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFVAQEG*GITQCW
Trigger: CCAGCACTGTGTTATCCCCAATCCCTCCTGTGCCAC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCTTGCAGGTGCGTGTTaGCCAAAGGCAGGACTCACC +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFLAGAC*PKAGLT
Trigger: GGTGAGTCCTGCCTTTGGCAAACACGCACCTGCAAG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 90 bp CAGATCCTATTTTTAGTTAGCCTCAGTTGTATTCTGCTCAGCCTTTaGAGCTTCGTAGGACTTAGTACAAGAAGTCACATGCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: QILFLVSLSCILLSL*SFVGLSTRSHMPVE
Trigger: TTCCACCGGCATGTGACTTCTTGTACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACAACTGAGGCTAACTAAAAATAGGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp TGGACAACAATGGAGACGTCACATAATTGTCCTTGCTGGCGCTGCTaGTTCAGTTTCTGTAGAATGGTGCTGGAAAAATCAGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: WTTMETSHNCPCWRC*FSFCRMVLEKSGNS
Trigger: AGAATTTCCTGATTTTTCCAGCACCATTCTACAGAAACTGAACCAGCAGCGCCAGCAAGGACAATTATGTGACGTCTCCATTGTTGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CCA 90 bp GCCCAATTAGATTCCCATCTGACCTCTCTCCGGAAAACTCTTCCATaGAAGAGCCATAGAAATCCACCTGCTCATCATAATTGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: AQLDSHLTSLRKTLP*KSHRNPPAHHNCFH
Trigger: ATGAAAGCAATTATGATGAGCAGGTGGATTTCTATGGCTCTTCCATGGAAGAGTTTTCCGGAGAGAGGTCAGATGGGAATCTAATTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCTCTGTCTGCACGGTGTaGATGGACTCTGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFSVCTV*MDSVTW
Trigger: CCAGGTCACAGAGTCCATCAACACCGTGCAGACAGA...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CACTATGCTGATTTCAGCAGAACTGAAGGACCACGACTCTCCCAGAATATCTGTAGATGGTGCTTCATTTaGAATTTCTTACCGCAGACC +
Preference number: 5 (lower is better)
Translates to: HYADFSRTEGPRLSQNICRWCFI*NFLPQT
Trigger: GGTCTGCGGTAAGAAATTCAAAATGAAGCACCATCT...ACAGATATTCTGGGAGAGTCGTGGTCCTTCAGTTCTGCTGAAATCAGCATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPYHSLF*CMPLKG
Trigger: GCCCTTGAGTGGCATGCACAAAAATAAACTATGGTA...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAGGGAAAGCACAGCTTaGCAGCTTCTGCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRRESTA*QLLLRL
Trigger: GAGACGGAGCAGAAGCTGCAAAGCTGTGCTTTCCCT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCCACTGTATGGAGGCTACAATTAACCAAACAGGATTTGGGAAAGCAAACCAAAGATGGTGCTTCATTTaGAATTTCTTACCGCAGACC +
Preference number: 5 (lower is better)
Translates to: PHCMEATINQTGFGKANQRWCFI*NFLPQT
Trigger: GGTCTGCGGTAAGAAATTCAAAATGAAGCACCATCT...TTGGTTTGCTTTCCCAAATCCTGTTTGGTTAATTGTAGCCTCCATACAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp CCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCAGTTTTGTCCCCCTTTAACCAAACAGGATTaGGGAAAGCAAACCAATGAG +
Preference number: 5 (lower is better)
Translates to: PTLKECILKILLGQFCPPLTKQD*GKQTNE
Trigger: CTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAA...AGGGGGACAAAACTGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACC +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWASSWAV*SPLSIT
Trigger: GGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTAGTATCTCCCCCACCTaGAAAGAGTGTATTCTCAAG +
Preference number: 5 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSSISPT*KECILK
Trigger: CTTGAGAATACACTCTTTCAAGGTGGGGGAGATACT...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTGAGGGTGATCAGTTTTaGGCAGAACAAAATGGCATC +
Preference number: 5 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSEGDQF*AEQNGI
Trigger: GATGCCATTTTGTTCTGCCAAAAACTGATCACCCTC...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 90 bp ACTCTTCCATGGAAGAGCCATAGAAATCCACCTGCTCATCATAATTaGTTTCATCAGCCTGTTCATCAAACTCAGCTTCCACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLPWKSHRNPPAHHN*FHQPVHQTQLPLSS
Trigger: AGAAGAAAGTGGAAGCTGAGTTTGATGAACAGGCTGATGAAAGCAATTATGATGAGCAGGTGGATTTCTATGGCTCTTCCATGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 90 bp GTGCTAATGCAAAGCTGTATTCCTGGGATAGAGTTCCTTATGCCATaGCCATCAAAAAGCAACATGAATAGAATGAGGAAGAAGAACCCA +
Preference number: 5 (lower is better)
Translates to: VLMQSCIPGIEFLMP*PSKSNMNRMRKKNP
Trigger: TGGGTTCTTCTTCCTCATTCTATTCATGTTGCTTTTTGATGGCCATGGCATAAGGAACTCTATCCCAGGAATACAGCTTTGCATTAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS-3UTR CAA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTACCGGAAAATGTGGCCTaGGACAACAATGGAGACGTC +
Preference number: 5 (lower is better)
Translates to: RQQSSVNQFLILGITLFLPENVA*DNNGDV
Trigger: GACGTCTCCATTGTTGTCCAAGGCCACATTTTCCGG...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTATAACTACTGCTGCTaGGTGACTGGTGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRYNYCC*VTGGHC
Trigger: GCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGATGACAGCTCGTCTTaGGTGCTCTCCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNDDSSS*VLSSSF
Trigger: AAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCACTGGTCGGCGTAGCTTaGTGGACTTTTAAGTTTAAG +
Preference number: 5 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSLVGVA*WTFKFK
Trigger: CTTAAACTTAAAAGTCCACAAAGCTACGCCGACCAG...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTTTCTGGACGAAACATaGGGAACCTCACAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSFLDET*GTSQKE
Trigger: TTCCTTTTGTGAGGTTCCCAATGTTTCGTCCAGAAA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATTTCTGGACGAAACATaGGGAACCTCACAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAFLDET*GTSQKE
Trigger: TTCCTTTTGTGAGGTTCCCAATGTTTCGTCCAGAAA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AAAGAGTATCTCCCCCACCTTGAAAGAGTGTATTCTCAAGATTCTTCTTGGGCATATCATCAAATGGTTTaGTGGCCTAAGAGTCACCTG +
Preference number: 5 (lower is better)
Translates to: KEYLPHLERVYSQDSSWAYHQMV*WPKSHL
Trigger: CAGGTGACTCTTAGGCCACAAAACCATTTGATGATA...TGCCCAAGAAGAATCTTGAGAATACACTCTTTCAAGGTGGGGGAGATACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTATCCCTAGAGCAAAGCTaGCAGGTGCGTGTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RQQSSVNQFLILGITLFLSLEQS*QVRVCQ
Trigger: TTGGCAAACACGCACCTGCAAGCTTTGCTCTAGGGA...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCGATGACAGCTCGTCTTaGGTGCTCTCCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFDDSSS*VLSSSF
Trigger: AAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATC...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATCTGGTCGGCGTAGCTTaGTGGACTTTTAAGTTTAAG +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNLVGVA*WTFKFK
Trigger: CTTAAACTTAAAAGTCCACAAAGCTACGCCGACCAG...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATGAGGGTGATCAGTTTTaGGCAGAACAAAATGGCATC +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNEGDQF*AEQNGI
Trigger: GATGCCATTTTGTTCTGCCAAAAACTGATCACCCTC...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ACTGAAGGACCACGACTCTCCCAGAATATCTGTATTTTTACCTCTCAGACTTCTTCCCTGAAAGATTGTTaGAACAATGTTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: TEGPRLSQNICIFTSQTSSLKDC*NNVTHN
Trigger: GTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGA...AGAAGTCTGAGAGGTAAAAATACAGATATTCTGGGAGAGTCGTGGTCCTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATAACCTCAGGTATGTTACACAGCTTAAAAGCATGTGCAATATTACCTTTCCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: VITSGMLHSLKACAILPFLPEKS*FQAPFH
Trigger: ATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAG...GAAAGGTAATATTGCACATGCTTTTAAGCTGTGTAACATACCTGAGGTTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTGTTCTCAAACACTCTaGGGTTCATCACATCAGGCA +
Preference number: 5 (lower is better)
Translates to: VIPERLFEQCYPQPSKLICSQTL*GSSHQA
Trigger: TGCCTGATGTGATGAACCCAAGAGTGTTTGAGAACA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNYHSLF*CMPLKG
Trigger: GCCCTTGAGTGGCATGCACAAAAATAAACTATGGTA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGTCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACC +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSSWAV*SPLSIT
Trigger: GGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGA...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGAGTATCTCCCCCACCTaGAAAGAGTGTATTCTCAAG +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRSISPT*KECILK
Trigger: CTTGAGAATACACTCTTTCAAGGTGGGGGAGATACT...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp ATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTAGGGAGAATCAGAGGCCATaGCCAGCAATGTCTATTACA +
Preference number: 5 (lower is better)
Translates to: IPERLFEQCYPQPSKLIRENQRP*PAMSIT
Trigger: TGTAATAGACATTGCTGGCAATGGCCTCTGATTCTC...CCTAATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCATCCCTGAAAGATTGTTaGAACAATGTTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSSLKDC*NNVTHN
Trigger: GTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGA...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTTATCCCCTCCTCCATaGTTAAGACAAGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNLSPPP*LRQVPK
Trigger: CTTTGGAACTTGTCTTAACAATGGAGGAGGGGATAA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 90 bp ATCATCTGTGCCCAGATTTGCATTAATTACCATAGTTTATTTTTGTaGATGCCACTCAAGGGCCAGATCCTATTTTTAGTTAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: IICAQICINYHSLFL*MPLKGQILFLVSLS
Trigger: ACTGAGGCTAACTAAAAATAGGATCTGGCCCTTGAGTGGCATGCACAAAAATAAACTATGGTAATTAATGCAAATCTGGGCACAGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GAGGCCATTGCCAGCAATGTCTATTACATTACAGCAAAGCCAAACTTTTCAAATTTAACCAAACAGGATTaGGGAAAGCAAACCAATGAG +
Preference number: 5 (lower is better)
Translates to: EAIASNVYYITAKPNFSNLTKQD*GKQTNE
Trigger: CTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAA...ATTTGAAAAGTTTGGCTTTGCTGTAATGTAATAGACATTGCTGGCAATGGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GCCTTGTACCGTAAATTATCTGTTTCATATTTAGAAAGTCACTCTCTTAGCATCTCTTCTTGGGCAGTTTaGTCCCCCTTAAGTATAACC +
Preference number: 5 (lower is better)
Translates to: ALYRKLSVSYLESHSLSISSWAV*SPLSIT
Trigger: GGTTATACTTAAGGGGGACAAAACTGCCCAAGAAGA...GATGCTAAGAGAGTGACTTTCTAAATATGAAACAGATAATTTACGGTACAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAGAGAATCAGAGGCCATaGCCAGCAATGTCTATTACA +
Preference number: 5 (lower is better)
Translates to: RQQSSVNQFLILGITLFLENQRP*PAMSIT
Trigger: TGTAATAGACATTGCTGGCAATGGCCTCTGATTCTC...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTAGACTACCTTGCTAAACTTAGGACTCCTTTTACAAACACATTCCAGTGCTCAATTTCATCACAAATCTaGTTCGGTGCTACAAGAGAA +
Preference number: 5 (lower is better)
Translates to: VDYLAKLRTPFTNTFQCSISSQI*FGATRE
Trigger: TTCTCTTGTAGCACCGAACAAGATTTGTGATGAAAT...TGAGCACTGGAATGTGTTTGTAAAAGGAGTCCTAAGTTTAGCAAGGTAGTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS-3UTR CAA 90 bp AGACAACAGAGCTCTGTTAACCAATTTCTCATCCTAGGAATCACATTATTTCTAAAAACTTCAGTGCATTaGTCTACCACATGCCACATC +
Preference number: 5 (lower is better)
Translates to: RQQSSVNQFLILGITLFLKTSVH*STTCHI
Trigger: GATGTGGCATGTGGTAGACAAATGCACTGAAGTTTT...TAGAAATAATGTGATTCCTAGGATGAGAAATTGGTTAACAGAGCTCTGTTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS-3UTR CAA 90 bp GTGATCCCTGAAAGATTGTTTGAACAATGTTACCCACAACCATCCAAACTTATTTTAACCAAACAGGATTaGGGAAAGCAAACCAATGAG +
Preference number: 5 (lower is better)
Translates to: VIPERLFEQCYPQPSKLILTKQD*GKQTNE
Trigger: CTCATTGGTTTGCTTTCCCAAATCCTGTTTGGTTAA...AATAAGTTTGGATGGTTGTGGGTAACATTGTTCAAACAATCTTTCAGGGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp CTCAGCGCTCACATCCCCCGCCCAAGATATCCTCTCTaGCGCCGGCGCAGGCCTGTTGTAGCCTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LSAHIPRPRYPL*RRRRPVVASAA
Trigger: GGCAGCTGAGGCTACAACAGGCCTGCGCCGGCGGCAGAGAGGATATCTTGGGCGGGGGATGTGAGCGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CCA 72 bp ACATGGGCCGGGTGTAGTGGAACTCGGCGCTGTCGCTaGCGCCCTCCTCCCCATCCTGGCTTGCCATTTCCG +
Preference number: 6 (lower is better)
Translates to: TWAGCSGTRRCR*RPPPHPGLPFP
Trigger: CGGAAATGGCAAGCCAGGATGGGGAGGAGGGCGCCAGCGACAGCGCCGAGTTCCACTACACCCGGCCCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp TCCTCCACTCCCGAAGGCTGCACCGTGTGCTCTGTCTaGACGGTGTTGATGGACTCTGTGACCTGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSTPEGCTVCSV*TVLMDSVTWCS
Trigger: CGAGCACCAGGTCACAGAGTCCATCAACACCGTGCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp TCCCCGATGTGGAAGTCCTCCTCCACTCCCGAAGGCTaGACCGTGTGCTCTGTCTGCACGGTGTTGATGGAC +
Preference number: 6 (lower is better)
Translates to: SPMWKSSSTPEG*TVCSVCTVLMD
Trigger: GTCCATCAACACCGTGCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCACATCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CAA 90 bp TGGCTTGCCATTTCCGTGCTCAGGCGGTCATGCTCTGTGGACGAGTaGCTGGGCAGGTATTCGTGCTCGGTGAGCTGGGATGACAGCTCG +
Preference number: 6 (lower is better)
Translates to: WLAISVLRRSCSVDE*LGRYSCSVSWDDSS
Trigger: CGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS TCA 72 bp GCTCGGGCTTCACGTGGATCCAGCGTTTGTGAGCCATaGTGCTGGGCTTGCTGTACATGGGCCGGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: ARASRGSSVCEP*CWACCTWAGCS
Trigger: ACTACACCCGGCCCATGTACAGCAAGCCCAGCATCATGGCTCACAAACGCTGGATCCACGTGAAGCCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS TCA 72 bp TCTAAGCGCTCGGGCTTCACGTGGATCCAGCGTTTGTaGGCCATGATGCTGGGCTTGCTGTACATGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SKRSGFTWIQRL*AMMLGLLYMGR
Trigger: CCGGCCCATGTACAGCAAGCCCAGCATCATGGCTCACAAACGCTGGATCCACGTGAAGCCCGAGCGCTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp CCATCCTGGCTTGCCATTTCCGTGCTCAGGCGGTCATaGTCTGTGGACGAGTTGCTGGGCAGGTATTCGTGC +
Preference number: 6 (lower is better)
Translates to: PSWLAISVLRRS*SVDELLGRYSC
Trigger: GCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCCTGAGCACGGAAATGGCAAGCCAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp TGGAAGTCCTCCTCCACTCCCGAAGGCTGCACCGTGTaGTCTGTCTGCACGGTGTTGATGGACTCTGTGACC +
Preference number: 6 (lower is better)
Translates to: WKSSSTPEGCTV*SVCTVLMDSVT
Trigger: GGTCACAGAGTCCATCAACACCGTGCAGACAGAGCACACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS GCA 72 bp TCATGCTCTGTGGACGAGTTGCTGGGCAGGTATTCGTaGTCGGTGAGCTGGGATGACAGCTCGTCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: SCSVDELLGRYS*SVSWDDSSSLV
Trigger: CACCAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 72 bp GACGAGTTGCTGGGCAGGTATTCGTGCTCGGTGAGCTaGGATGACAGCTCGTCTTTGGTGCTCTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: DELLGRYSCSVS*DDSSSLVLSSS
Trigger: TGAAGAGGAGAGCACCAAAGACGAGCTGTCATCCCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CAA 72 bp GATTCAATCCCTAGAGCAAAGCTTGCAGGTGCGTGTTaGCCAAAGGCAGGACTCACCACCACTCCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: DSIPRAKLAGAC*PKAGLTTTPCG
Trigger: TCCACAAGGAGTGGTGGTGAGTCCTGCCTTTGGCAAACACGCACCTGCAAGCTTTGCTCTAGGGATTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS CAA 90 bp TGGGTAAGGGATTCAATCCCTAGAGCAAAGCTTGCAGGTGCGTGTTaGCCAAAGGCAGGACTCACCACCACTCCTTGTGGAACTCCTGAT +
Preference number: 6 (lower is better)
Translates to: WVRDSIPRAKLAGAC*PKAGLTTTPCGTPD
Trigger: ATCAGGAGTTCCACAAGGAGTGGTGGTGAGTCCTGCCTTTGGCAAACACGCACCTGCAAGCTTTGCTCTAGGGATTGAATCCCTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 72 bp ATTCAATCCCTAGAGCAAAGCTTGCAGGTGCGTGTTTaGCAAAGGCAGGACTCACCACCACTCCTTGTGGAA +
Preference number: 6 (lower is better)
Translates to: IQSLEQSLQVRV*QRQDSPPLLVE
Trigger: TTCCACAAGGAGTGGTGGTGAGTCCTGCCTTTGGCAAACACGCACCTGCAAGCTTTGCTCTAGGGATTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 72 bp GCATTTGTCTACCACATGCCACATCTGGAGGAAGCTTaGCGCTGTCAAGTAACTAACAATTTCTGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: AFVYHMPHLEEA*RCQVTNNFWSG
Trigger: CCCGCTCCAGAAATTGTTAGTTACTTGACAGCGGCAAGCTTCCTCCAGATGTGGCATGTGGTAGACAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CCA 72 bp GCAAGAACGGCTTTGTGTGCCCGGAAAATGTGGCCTTaGACAACAATGGAGACGTCACATAATTGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ARTALCARKMWP*TTMETSHNCPC
Trigger: GCAAGGACAATTATGTGACGTCTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACACAAAGCCGTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CCA 72 bp AAAGTTCCACAAAGTCCTCTAGCCTATGGGCCCCACTaGGTAAGGGATTCAATCCCTAGAGCAAAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: KVPQSPLAYGPH*VRDSIPRAKLA
Trigger: TGCAAGCTTTGCTCTAGGGATTGAATCCCTTACCCAGTGGGGCCCATAGGCTAGAGGACTTTGTGGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS GCA 72 bp CCTTGGACAACAATGGAGACGTCACATAATTGTCCTTaGTGGCGCTGCTGGTTCAGTTTCTGTAGAATGGTG +
Preference number: 6 (lower is better)
Translates to: PWTTMETSHNCP*WRCWFSFCRMV
Trigger: CACCATTCTACAGAAACTGAACCAGCAGCGCCAGCAAGGACAATTATGTGACGTCTCCATTGTTGTCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS GCA 72 bp GCTCAAAGCTCTCTACCAGGCCATTATAACTACTGCTaGTTGGTGACTGGTGGTCACTGCCATGATTTAGCT +
Preference number: 6 (lower is better)
Translates to: AQSSLPGHYNYC*LVTGGHCHDLA
Trigger: AGCTAAATCATGGCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCCTGGTAGAGAGCTTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS GCA 72 bp CCAGCTCAAAGCTCTCTACCAGGCCATTATAACTACTaGTGCTTGGTGACTGGTGGTCACTGCCATGATTTA +
Preference number: 6 (lower is better)
Translates to: PAQSSLPGHYNY*CLVTGGHCHDL
Trigger: TAAATCATGGCAGTGACCACCAGTCACCAAGCAGCAGTAGTTATAATGGCCTGGTAGAGAGCTTTGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CAA 72 bp AGGACTGTAGGGTTTCCCTCTAAAACTTCAGTGCATTaGTCTACCACATGCCACATCTGGAGGAAGCTTGCC +
Preference number: 6 (lower is better)
Translates to: RTVGFPSKTSVH*STTCHIWRKLA
Trigger: GGCAAGCTTCCTCCAGATGTGGCATGTGGTAGACAAATGCACTGAAGTTTTAGAGGGAAACCCTACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
ENST00000450858.1
CDS CAA 72 bp CAGGACTCACCACCACTCCTTGTGGAACTCCTGATTTaGGTTCTGTGTCTGTGGGTAAGAGAACTGAATCCA +
Preference number: 6 (lower is better)
Translates to: QDSPPLLVELLI*VLCLWVRELNP
Trigger: TGGATTCAGTTCTCTTACCCACAGACACAGAACCAAAATCAGGAGTTCCACAAGGAGTGGTGGTGAGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS CCA 72 bp GATTCCCATCTGACCTCTCTCCGGAAAACTCTTCCATaGAAGAGCCATAGAAATCCACCTGCTCATCATAAT +
Preference number: 6 (lower is better)
Translates to: DSHLTSLRKTLP*KSHRNPPAHHN
Trigger: ATTATGATGAGCAGGTGGATTTCTATGGCTCTTCCATGGAAGAGTTTTCCGGAGAGAGGTCAGATGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CAA 90 bp GTAGAATGGTGCTGGAAAAATCAGGAAATTCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCATCACAAATCTTGTTCGGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VEWCWKNQEILPEKS*FQAPFHHKSCSVLP
Trigger: TGGCAGCACCGAACAAGATTTGTGATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAGAATTTCCTGATTTTTCCAGCACCATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449886.5
ENST00000450858.1
CDS CCA 72 bp CAAATCTTGTTCGGTGCTAATGCAAAGCTGTATTCCTaGGATAGAGTTCCTTATGCCATGGCCATCAAAAAG +
Preference number: 6 (lower is better)
Translates to: QILFGANAKLYS*DRVPYAMAIKK
Trigger: CTTTTTGATGGCCATGGCATAAGGAACTCTATCCCAGGAATACAGCTTTGCATTAGCACCGAACAAGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS GCA 72 bp TTTTTAGTTAGCCTCAGTTGTATTCTGCTCAGCCTTTaGAGCTTCGTAGGACTTAGTACAAGAAGTCACATG +
Preference number: 6 (lower is better)
Translates to: FLVSLSCILLSL*SFVGLSTRSHM
Trigger: CATGTGACTTCTTGTACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACAACTGAGGCTAACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CCA 72 bp CAAAGCTGTATTCCTGGGATAGAGTTCCTTATGCCATaGCCATCAAAAAGCAACATGAATAGAATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: QSCIPGIEFLMP*PSKSNMNRMRK
Trigger: CTTCCTCATTCTATTCATGTTGCTTTTTGATGGCCATGGCATAAGGAACTCTATCCCAGGAATACAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS CAA 90 bp GTAGAATGGTGCTGGAAAAATCAGGAAATTCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCATCACAAATCTTGTTCGGTGCTAATG +
Preference number: 6 (lower is better)
Translates to: VEWCWKNQEILPEKS*FQAPFHHKSCSVLM
Trigger: CATTAGCACCGAACAAGATTTGTGATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAGAATTTCCTGATTTTTCCAGCACCATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373464.5
CDS CAA 90 bp CGCATCATCTGTGCCCAGATTTGCATTAATTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGCCAGATCCTATTTTTAGTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: RIICAQICINYHSLF*CMPLKGQILFLVSL
Trigger: GAGGCTAACTAAAAATAGGATCTGGCCCTTGAGTGGCATGCACAAAAATAAACTATGGTAATTAATGCAAATCTGGGCACAGATGATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5
CDS CAA 90 bp GTAGAATGGTGCTGGAAAAATCAGGAAATTCTACCCGAAAAGAGTTaGTTCCAGGCTCCATTTCATCACAAATCTTGTTCGGTGCTACAA +
Preference number: 6 (lower is better)
Translates to: VEWCWKNQEILPEKS*FQAPFHHKSCSVLQ
Trigger: TTGTAGCACCGAACAAGATTTGTGATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAGAATTTCCTGATTTTTCCAGCACCATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS CAA 90 bp TCTACCCGAAAAGAGTTTGTTCCAGGCTCCATTTCATCACAAATCTaGTTCGGTGCTACAAGAGAAAGAAAAATTAGTACAAATTCCAGC +
Preference number: 6 (lower is better)
Translates to: STRKEFVPGSISSQI*FGATRERKISTNSS
Trigger: GCTGGAATTTGTACTAATTTTTCTTTCTCTTGTAGCACCGAACAAGATTTGTGATGAAATGGAGCCTGGAACAAACTCTTTTCGGGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373457.1
CDS CAA 72 bp TGTGCCCAGATTTGCATTAATTACCATAGTTTATTTTaGTGCATGCCACTCAAGGGCCAGATCCTATTTTTA +
Preference number: 6 (lower is better)
Translates to: CAQICINYHSLF*CMPLKGQILFL
Trigger: TAAAAATAGGATCTGGCCCTTGAGTGGCATGCACAAAAATAAACTATGGTAATTAATGCAAATCTGGGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373457.1
ENST00000373464.5
ENST00000449886.5