RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000174282

Ensembl transcript IDs: ENST00000311403.4, ENST00000380599.9, ENST00000639670.2, ENST00000639962.1

Found 959 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: RPTLGKDETQSHTPR*AGSGITMVWSRPWA
Trigger: GGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR GCA 90 bp CTAAATTTTGCGTGCTGCGGCACAGAACCAGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGA +
Preference number: 1 (lower is better)
Translates to: LNFACCGTEPVAFSL*HHPSSQGTWGKRAR
Trigger: TCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 90 bp AAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATaGTCTGGTCCAGGCCCTGGGCCACAAAGAATGGAATGTGCTAGG +
Preference number: 1 (lower is better)
Translates to: KPKATLPGGRGQVSQ*SGPGPGPQRMECAR
Trigger: CCTAGCACATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 90 bp GAAGGTGTCTTGATACAAGGGAAACAGGGACGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGT +
Preference number: 1 (lower is better)
Translates to: EGVLIQGKQGRRDPR*GRMKPKATLPGGRG
Trigger: ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACGTCCCTGTTTCCCTTGTATCAAGACACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR GCA 90 bp TGGAGCTCACTGGATTTGGGGGTCAAGATAGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGCTCAGCCACAGAACAGAGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: WSSLDLGVKIGPIFP*PGLGKCSATEQRGR
Trigger: TCTGCCCCTCTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 90 bp GTCCAGGCCCTGGGCCACAAAGAATGGAATGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGG +
Preference number: 1 (lower is better)
Translates to: VQALGHKEWNVLGSN*EGLRESFRTRRVIR
Trigger: CCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAGGGCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 90 bp GTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAACTGGGAAGGGCTTAGAGAAAGCTTC +
Preference number: 1 (lower is better)
Translates to: VRYHNGLVQALGHKE*NVLGSNWEGLRESF
Trigger: GAAGCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR TCA 90 bp TGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGT +
Preference number: 1 (lower is better)
Translates to: WEGLRESFRTRRVIR*ERWFPLGLRIRGAG
Trigger: ACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR GCA 90 bp TCACTACGTATAGAGCTAGTCTGTAGAATTCTAAATTTTGCGTGCTaGGGCACAGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCT +
Preference number: 1 (lower is better)
Translates to: SLRIELVCRILNFAC*GTEPVAFSLCHHPS
Trigger: AGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAGAATTCTACAGACTAGCTCTATACGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 90 bp TATGTAGAGGCAGAAAGAGGTGTGATCTGCTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACTGGATTTGGGGGTCAAGATAGGGCC +
Preference number: 1 (lower is better)
Translates to: YVEAERGVICLPLLP*KNLELTGFGGQDRA
Trigger: GGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGATCACACCTCTTTCTGCCTCTACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCCCCCAAACCTCCTTaGCCTGGCTTGGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTSPKPP*PGLGEA
Trigger: GGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAASHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAGTATATTGCTCAGTTaGCCCAAGGGCTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSILLS*PKGWRR
Trigger: CCTTCTCCAGCCCTTGGGGCAACTGAGCAATATACT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCTTGCCCTTGGCAGTaGTTGCTGCTAGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTSCPWQ*LLLGQP
Trigger: TGGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCCTGGACTGGGAAAGTaGTCAGCCACAGAACAGAGG +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGPGLGK*SATEQR
Trigger: CCTCTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAAGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 2 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACA +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGSHTPR*AGSGIT
Trigger: TGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGAAATACAGGGACCCTaGCCAGGGTTAACTAGTGCA +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGEIQGP*PGLTSA
Trigger: TGCACTAGTTAACCCTGGTCAGGGTCCCTGTATTTC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAAMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACTTCTCCATCCCATATaGAGTTCTTCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTLLHPI*SSSLLA
Trigger: GGCCAGGAGGGAAGAACTCCATATGGGATGGAGAAG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTCCCTGGAGGAAGACTaGGAGGGGAACCTCGAAAGA +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTSLEED*EGNLER
Trigger: TCTTTCGAGGTTCCCCTCTCAGTCTTCCTCCAGGGA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAASWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTGPIFP*PGLGKC
Trigger: GCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGRSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGATTTATCTCCCCCACTaGAAGGAAATACAGGGACCC +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGIYLPH*KEIQGP
Trigger: GGGTCCCTGTATTTCCTTCCAGTGGGGGAGATAAAT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VREMVSPRFTNQGSRLDISHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 2 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAAVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTTCTCCATCCCATATaGAGTTCTTCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLLHPI*SSSLLA
Trigger: GGCCAGGAGGGAAGAACTCCATATGGGATGGAGAAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCTGAGGAAGGTGTCTTaGTACAAGGGAAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGLRKVS*YKGNRD
Trigger: GTCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCCCCAAACCTCCTTaGCCTGGCTTGGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSPKPP*PGLGEA
Trigger: GGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGGATGGAAGGTCATGTaGAAATCCTGGGCTTACCCA +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGGWKVM*KSWAYP
Trigger: TGGGTAAGCCCAGGATTTGCACATGACCTTCCATCC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 2 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAAEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAATATGGGGAGGAACATaGAAGATCCAAAGGCATGGA +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTIWGGT*KIQRHG
Trigger: TCCATGCCTTTGGATCTTCCATGTTCCTCCCCATAT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 2 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCCCATTTGTCAAATTTaGTCCCCCATACTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGPICQI*SPILAL
Trigger: GAGAGCCAGTATGGGGGAGCAAATTTGACAAATGGG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 2 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGAACTGAGTCAAAGATaGGGTGTAAGGTGCTATTTT +
Preference number: 2 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGELSQR*GVRCYF
Trigger: AAAATAGCACCTTACACCCCATCTTTGACTCAGTTC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CAA 90 bp TCTGCTTACCTCTTTTGCCTTGGAAGAATCTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCAATATTTCCCTGCCCTGGACTGGGA +
Preference number: 2 (lower is better)
Translates to: SAYLFCLGRIWSSLD*GVKIGPIFPCPGLG
Trigger: TCCCAGTCCAGGGCAGGGAAATATTGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSLGHKE*NVLGSN
Trigger: GTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTTCCCTGCCCTGGACTaGGAAAGTGCTCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFFPALD*ESAQPQ
Trigger: CTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAATTTTTCTGGCTATTTaGTCTAGTCTGGGAGAAACC +
Preference number: 2 (lower is better)
Translates to: SATTRLPREHGERGHELTIFLAI*SSLGET
Trigger: GGTTTCTCCCAGACTAGACCAAATAGCCAGAAAAAT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGTRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAARWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGAACTGAGTCAAAGATaGGGTGTAAGGTGCTATTTT +
Preference number: 2 (lower is better)
Translates to: LPPKAMILPLAVIAARAAELSQR*GVRCYF
Trigger: AAAATAGCACCTTACACCCCATCTTTGACTCAGTTC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCTATTTGGTCTAGTCTaGGAGAAACCATCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LAVIAARAAILAPKTVAGLFGLV*EKPSGK
Trigger: TTTTCCTGATGGTTTCTCCCAGACTAGACCAAATAG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGGPIFP*PGLGKC
Trigger: GCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLGHKE*NVLGSN
Trigger: GTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 2 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFRSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATATTTATCTCCCCCACTaGAAGGAAATACAGGGACCC +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHIYLPH*KEIQGP
Trigger: GGGTCCCTGTATTTCCTTCCAGTGGGGGAGATAAAT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGC +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVGPIFP*PGLGKC
Trigger: GCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHTRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFRWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGAACTGAGTCAAAGATaGGGTGTAAGGTGCTATTTT +
Preference number: 2 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHELSQR*GVRCYF
Trigger: AAAATAGCACCTTACACCCCATCTTTGACTCAGTTC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CAA 90 bp GTGGAGCACAGTTCATTTGTCTTGTTGGTTTATTGGCCTACAGAGTaGGACACACACACAAATGCGGAGATAAATATTGGTCAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: VEHSSFVLLVYWPTE*DTHTNAEINIGQFL
Trigger: GAGAAACTGACCAATATTTATCTCCGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATAAACCAACAAGACAAATGAACTGTGCTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
3UTR-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCCCATTTGTCAAATTTaGTCCCCCATACTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVPICQI*SPILAL
Trigger: GAGAGCCAGTATGGGGGAGCAAATTTGACAAATGGG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTTTCCCATGCCTGTTTaGCTCAGAGGAGTATGGGTT +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVFPMPV*LRGVWV
Trigger: AACCCATACTCCTCTGAGGCAAACAGGCATGGGAAA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTATTTATCTCCCCCACTaGAAGGAAATACAGGGACCC +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVIYLPH*KEIQGP
Trigger: GGGTCCCTGTATTTCCTTCCAGTGGGGGAGATAAAT...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CAA 90 bp AGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTaGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCCTTGATC +
Preference number: 2 (lower is better)
Translates to: SSNTYILISTSPQSH*LPRTTTFWKLFSLI
Trigger: GATCAAGGAAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCATTTATCTCCCCCACTaGAAGGAAATACAGGGACCC +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPIYLPH*KEIQGP
Trigger: GGGTCCCTGTATTTCCTTCCAGTGGGGGAGATAAAT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR TCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTAATTTTGACCTATTCTaGAGTTCCAATTCTCCGGTC +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVNFDLF*SSNSPV
Trigger: GACCGGAGAATTGGAACTTCAGAATAGGTCAAAATT...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTCTGCTTACCTCTTTTaGCTTGGAAGAATCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSAYLF*LGRIWS
Trigger: GCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCTATTTGGTCTAGTCTaGGAGAAACCATCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: PQLKYIYFNLHVATISFVLFGLV*EKPSGK
Trigger: TTTTCCTGATGGTTTCTCCCAGACTAGACCAAATAG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPLPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR TCA 72 bp GGAAACAGGGACGTAGAGACCCACGCTGGGGAAGGATaGAACCCAAAGCCACACTCCCAGGTGGGCGGGGTC +
Preference number: 3 (lower is better)
Translates to: GNRDVETHAGEG*NPKPHSQVGGV
Trigger: GACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACGTCCCTGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR GCA 72 bp GCGTGCTGCGGCACAGAACCAGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAGGGAACATGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: ACCGTEPVAFSL*HHPSSQGTWGK
Trigger: CTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCTGTGCCGCAGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp GCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATaGTCTGGTCCAGGCCCTGGGCCACAAAGAATGGAA +
Preference number: 3 (lower is better)
Translates to: ATLPGGRGQVSQ*SGPGPGPQRME
Trigger: TTCCATTCTTTGTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp GGCAGAGGGGCAACCCTCCCCCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTCCGAAGTCCAGGAATA +
Preference number: 3 (lower is better)
Translates to: GRGATLPQTSLT*LGRGHLRSPGI
Trigger: TATTCCTGGACTTCGGAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAGGGTTGCCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTCCCCCAAACCTCCTaGACCTGGCTTGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: LPPKAMILPLAVIAARAALPQTS*TWLGRG
Trigger: GCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp ACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACAAAGAATGGAATGTGC +
Preference number: 3 (lower is better)
Translates to: TPRWAGSGITMV*SRPWATKNGMC
Trigger: GCACATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp CTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LGKDETQSHTPR*AGSGITMVWSR
Trigger: CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGCTAGGGCAGCCATCTaGGCCCCAAAAACAGTAGCT +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGARAAI*APKTVA
Trigger: AGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 3 (lower is better)
Translates to: SATTRLPREHGERGHELTWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGCTGAGGAAGGTGTCTaGATACAAGGGAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGAEEGV*IQGKQG
Trigger: TCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAGC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 3 (lower is better)
Translates to: LPPKAMILPLAVIAARAAWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCGCCACAATCTCATTaGTTGCCCAGAACCACCACA +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSPQSH*LPRTTT
Trigger: TGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCTTCCTCAGTCTCTCTaGTGGTTCCGCTGTATAGAT +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLPQSL*WFRCID
Trigger: ATCTATACAGCGGAACCACAAGAGAGACTGAGGAAG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCGCCACAATCTCATTaGTTGCCCAGAACCACCACA +
Preference number: 3 (lower is better)
Translates to: SATTRLPREHGERGHELTSPQSH*LPRTTT
Trigger: TGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACTTCCTCAGTCTCTCTaGTGGTTCCGCTGTATAGAT +
Preference number: 3 (lower is better)
Translates to: SATTRLPREHGERGHELTLPQSL*WFRCID
Trigger: ATCTATACAGCGGAACCACAAGAGAGACTGAGGAAG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR GCA 72 bp CTGGATTTGGGGGTCAAGATAGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGCTCAGCCACAGAACAG +
Preference number: 3 (lower is better)
Translates to: LDLGVKIGPIFP*PGLGKCSATEQ
Trigger: CTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCCTATCTTGACCCCCAAATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp CACAATGGTCTGGTCCAGGCCCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAACTGGGAAGGGCTTAGA +
Preference number: 3 (lower is better)
Translates to: HNGLVQALGHKE*NVLGSNWEGLR
Trigger: TCTAAGCCCTTCCCAGTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGACCATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp TGGCTTGGGAGAGGCCATCTCCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATCCAAAGGCATGGAAGC +
Preference number: 3 (lower is better)
Translates to: WLGRGHLRSPGI*GGTWKIQRHGS
Trigger: GCTTCCATGCCTTTGGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: LAVIAARAAILAPKTVAGKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGCTGAGGAAGGTGTCTaGATACAAGGGAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: LAVIAARAAILAPKTVAGAEEGV*IQGKQG
Trigger: TCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAGC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGAAAAGGCTGCCATTTaGATGACAGCAACTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGEKAAI*MTATFP
Trigger: AGGAAAAGTTGCTGTCATCAAAATGGCAGCCTTTTC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: SATTRLPREHGERGHELTLKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTTCAGGTTAAGTATATaGCTCAGTTGCCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSFRLSI*LSCPKG
Trigger: GCCCTTGGGGCAACTGAGCAATATACTTAACCTGAA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 3 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTCCCATTTGTCAAATTaGCTCCCCCATACTGGCTCT +
Preference number: 3 (lower is better)
Translates to: LAVIAARAAILAPKTVAGSHLSN*LPHTGS
Trigger: AGAGCCAGTATGGGGGAGCAAATTTGACAAATGGGA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCTCCCCCAAACCTCCTaGACCTGGCTTGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGLPQTS*TWLGRG
Trigger: GCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 3 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 3 (lower is better)
Translates to: LAVIAARAAILAPKTVAGICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 3 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp CTGGGCCACAAAGAATGGAATGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGG +
Preference number: 3 (lower is better)
Translates to: LGHKEWNVLGSN*EGLRESFRTRR
Trigger: CCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCTAGGGCAGCCATCTaGGCCCCAAAAACAGTAGCT +
Preference number: 3 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHARAAI*APKTVA
Trigger: AGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 3 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 3 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CCA 72 bp TGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTaGCTATTTGGTCTAGTCTGGGAGAAACCATCAGGA +
Preference number: 3 (lower is better)
Translates to: WAYPPIRPLSFF*LFGLVWEKPSG
Trigger: TCCTGATGGTTTCTCCCAGACTAGACCAAATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR TCA 72 bp GGGAGCAGGTTAGACATTCAGAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAGTATATTGCTCAGTTG +
Preference number: 3 (lower is better)
Translates to: GSRLDIQSWWGL*VEIQVKYIAQL
Trigger: CAACTGAGCAATATACTTAACCTGAATCTCTACTCACAGCCCCCACCAGCTCTGAATGTCTAACCTGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTTTTCCCATGCCTGTTaGCCTCAGAGGAGTATGGGT +
Preference number: 3 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFFSHAC*PQRSMG
Trigger: ACCCATACTCCTCTGAGGCAAACAGGCATGGGAAAA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR TCA 72 bp CTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTAGGTTTACGAATCAGG +
Preference number: 3 (lower is better)
Translates to: LRESFRTRRVIR*ERWFPLGLRIR
Trigger: CCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGAAAAGGCTGCCATTTaGATGACAGCAACTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHEKAAI*MTATFP
Trigger: AGGAAAAGTTGCTGTCATCAAAATGGCAGCCTTTTC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: PQLKYIYFNLHVATISFVKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTTCAGGTTAAGTATATaGCTCAGTTGCCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPFRLSI*LSCPKG
Trigger: GCCCTTGGGGCAACTGAGCAATATACTTAACCTGAA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPLKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 3 (lower is better)
Translates to: PQLKYIYFNLHVATISFVHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGCCCAGGCGGCGGGCTaGCTGGCATTGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGAQAAG*LALPQG
Trigger: CCCCTGTGGCAATGCCAGCCAGCCCGCCGCCTGGGC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGGCAATGACAGGGGTTaGGGTGCCCCCGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHGNDRG*GAPGPL
Trigger: GAGCGGCCCGGGGGCACCCCAACCCCTGTCATTGCC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGVGPLG*PHGEQA
Trigger: CGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTAC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTCGGGGCAGCCCACTaGCCCCCACACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLGAAH*PPHWHL
Trigger: GAGGTGCCAGTGTGGGGGGCAGTGGGCTGCCCCGAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGGCCGCTCAGCAGCATaGCTCTGCCCGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGGRSAA*LCPWRL
Trigger: GAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGGCCGCTCAGCAGCATaGCTCTGCCCGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGGRSAA*LCPWRL
Trigger: GAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCTTCTGCCTCCAACGTaGTGGCCGGCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGLLPPT*WPAASG
Trigger: CCCCGAGGCCGCCGGCCACCACGTTGGAGGCAGAAG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTGGGAGCCCCCACCGTaGGCCTCTTGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHWEPPP*ASWCFR
Trigger: GCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHTTFTT*SGPPRK
Trigger: CTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCGGGCTGGCTGGCATTaGCACAGGGGCCGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRAGWH*HRGRCV
Trigger: AACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGCTGGTGGGTGTGGCTaGAGGCTCAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGAGGCG*RLRGRR
Trigger: CCTCCTCCCCCTGAGCCTGCAGCCACACCCACCAGC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGGTGCCTCCGCTCTGTaGGGGCACGTCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRGASAL*GHVPLG
Trigger: GCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGQSPHR*LRSVRA
Trigger: TGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGGGCAGCTGCGGTCTTaGACACCTTGGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHGQLRS*TPWRSG
Trigger: CCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGAPRRH*ASWVCS
Trigger: GCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCCACCACCAGGCAGTaGGAGCCGGGCGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSTTRQ*EPGAVD
Trigger: ATCTACAGCGCCCGGCTCGCACTGCCTGGTGGTGGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTGTCCTCTTCAGGCTaGGAGGTGGCCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLSSSG*EVAMGA
Trigger: AGCCCCCATGGCCACCTCGCAGCCTGAAGAGGACAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGTTFTT*SGPPRK
Trigger: CTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCGGGCTGGCTGGCATTaGCACAGGGGCCGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGRAGWH*HRGRCV
Trigger: AACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTCCGTTCCAGCTTCTaGCTCCAACGTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLRSSF*LQRGGR
Trigger: CCGGCCACCACGTTGGAGGCAGAAGCTGGAACGGAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGGGCAGCTGCGGTCTTaGACACCTTGGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGGQLRS*TPWRSG
Trigger: CCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGAAQGS*GLAHLG
Trigger: GCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTCAGCAGCATGCCTCTaGCCGTGGCGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSAACL*PWRLRA
Trigger: TGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCCCAGATTTTCCCCTaGCACCGCCAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSQIFP*HRQVPG
Trigger: GCCGGGAACCTGGCGGTGGCAGGGGAAAATCTGGGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTCCAGGACCCGGGGTaGGGAAGAAGCAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLQDPG*GRSRGR
Trigger: TCTCCCCCTGCTTCTTCCCCACCCCGGGTCCTGGAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTAGCTGCTGGGACTCCTaGCAACTCCAGGACCCGGGG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSCWDS*QLQDPG
Trigger: CCCCGGGTCCTGGAGTTGCCAGGAGTCCCAGCAGCT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGCCCAGGCGGCGGGCTaGCTGGCATTGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTAQAAG*LALPQG
Trigger: CCCCTGTGGCAATGCCAGCCAGCCCGCCGCCTGGGC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTGCTGTGGCTGGGCTaGTGGGTGTGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLLWLG*WVWLQA
Trigger: AGCCTGCAGCCACACCCACCAGCCCAGCCACAGCAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAGTCCTTCCAGCCCGTaGATTCCGGCCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSPSSP*IPALGL
Trigger: GAGGCCAAGGGCCGGAATCCACGGGCTGGAAGGACT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCTTCTGCCTCCAACGTaGTGGCCGGCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLLPPT*WPAASG
Trigger: CCCCGAGGCCGCCGGCCACCACGTTGGAGGCAGAAG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAGGGTGGTGAAGGTCTaGGCACAGTCCCCGCATCGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRVVKV*AQSPHR
Trigger: CCGATGCGGGGACTGTGCCCAGACCTTCACCACCCT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGCATGCCTCTGCCCGTaGCGGCTCAGGGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRACLCP*RLRAAA
Trigger: CGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGAGCCGCTGTTCATTaGGCTGGCGCAGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGAAVH*AGAGRR
Trigger: CCGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTGAGATGCGGCGCTTaGCGATGGCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLRCGA*RWPPPL
Trigger: TAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCCCCCAAACCTCCTTaGCCTGGCTTGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSPKPP*PGLGEA
Trigger: GGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAATCTCTGCTACAGCTaGCCCGTCCCCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHNLCYS*PVPSTT
Trigger: GGTGGTGGAGGGGACGGGGCAGCTGTAGCAGAGATT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAGATGCACTGGTACCTaGGCTCCCCCGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRCTGT*APPCAT
Trigger: TGTGGCACACGGGGGAGCGCAGGTACCAGTGCATCT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGCTGGTGGGTGTGGCTaGAGGCTCAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGAGGCG*RLRGRR
Trigger: CCTCCTCCCCCTGAGCCTGCAGCCACACCCACCAGC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGTGGCTGGGCTGACTaGTGTGGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGGWAD*CGWAGG
Trigger: CCCACCAGCCCAGCCACAGCAGTCAGCCCAGCCACC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTATAGCTGCCCCCGCTTaGCACTACTGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGIAAPA*HYWGLL
Trigger: GAGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTAT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACGGCCGCTCCGGTTTTaGCCGCCTCCAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTRPLRF*PPPAPA
Trigger: AGCCGGAGCTGGAGGCGGGCAAAACCGGAGCGGCCG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGAGGACGGCGGGGGCATaGGACGGGTCCGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRRTAGA*DGSVTS
Trigger: AGAGGTGACGGACCCGTCCCATGCCCCCGCCGTCCT...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAGGCAGCTGTGGTGGTaGCAGGGTTGGGTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGRQLWW*QGWVRR
Trigger: GCGCCGCACCCAACCCTGCCACCACCACAGCTGCCT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCACACATACAGCACGTaGCCGCCCACCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHHTYST*PPTTFT
Trigger: GGTGAAGGTGGTGGGCGGCCACGTGCTGTATGTGTG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTCTTGTAGGGCCGCTTaGCTGCCCGCATGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSCRAA*LPAWGA
Trigger: TGCTCCCCATGCGGGCAGCCAAGCGGCCCTACAAGA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCTTGTAGGGCCGCTTaGCTGCCCGCATGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSCRAA*LPAWGA
Trigger: TGCTCCCCATGCGGGCAGCCAAGCGGCCCTACAAGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCGGTGTGTTGAGGGTTaGAGAAAGGGGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRCVEG*RKGSLR
Trigger: CCGGAGGCTCCCCTTTCTCCAACCCTCAACACACCG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGGCGGCGGGCTGGCTaGCATTGCCACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAARRRAG*HCHRGR
Trigger: CCGGCCCCTGTGGCAATGCCAGCCAGCCCGCCGCCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGGCTCTGGGGCAGGTaGAGGCCCAGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAARLWGR*RPRRRA
Trigger: AGCCCGCCGCCTGGGCCTCCACCTGCCCCAGAGCCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCCTTGGCCTCCTCCGTaGTGGTGGCCATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGPWPPP*WWPWLA
Trigger: GGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGAGTCCTTCCAGCCCGTaGATTCCGGCCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSPSSP*IPALGL
Trigger: GAGGCCAAGGGCCGGAATCCACGGGCTGGAAGGACT...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTGCCTCCAACGTGGTaGCCGGCGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAALPPTW*PAASGQ
Trigger: CTGCCCCGAGGCCGCCGGCCACCACGTTGGAGGCAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGGCAATGACAGGGGTTaGGGTGCCCCCGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTGNDRG*GAPGPL
Trigger: GAGCGGCCCGGGGGCACCCCAACCCCTGTCATTGCC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGCCCCCATGGACAATaGCAGAGGGGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGCPHGQ*QRGLGG
Trigger: CCCACCCAGCCCCCTCTGTCATTGTCCATGGGGGCA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTCCCCACCAGCCTTTaGTTCCTCCTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLPTSL*FLLILL
Trigger: GAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGAFSGW*RSGHSP
Trigger: GGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGATAGGGTCCTGGAGTaGGGCGGTCTCGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGDRVLE*GGLGSF
Trigger: GAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTGCGCTCCCCCGTGTaGCACACTTCATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLRSPV*HTSCFV
Trigger: CACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCTGCGCTCCCCCGTGTaGCACACTTCATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGLRSPV*HTSCFV
Trigger: CACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTCGGGGCAGCCCACTaGCCCCCACACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAALGAAH*PPHWHL
Trigger: GAGGTGCCAGTGTGGGGGGCAGTGGGCTGCCCCGAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGGCAGCTGCGGTCTTaGACACCTTGGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGQLRS*TPWRSG
Trigger: CCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTGGTGGGGCAGGGGGTaGTGCTTGAGGATTCACTGC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGWWGRG*CLRIHC
Trigger: GCAGTGAATCCTCAAGCAGCACCCCCTGCCCCACCA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGCAAGTCAGGGGCCTaGGCCTCAGCCCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGCKSGA*ASALSP
Trigger: GGGTGACAGGGCTGAGGCCCAGGCCCCTGACTTGCA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCACACATACAGCACGTaGCCGCCCACCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGHTYST*PPTTFT
Trigger: GGTGAAGGTGGTGGGCGGCCACGTGCTGTATGTGTG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAGGCTCTGGGGCAGGTaGAGGCCCAGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTRLWGR*RPRRRA
Trigger: AGCCCGCCGCCTGGGCCTCCACCTGCCCCAGAGCCT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAGGCTCTGGGGCAGGTaGAGGCCCAGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSRLWGR*RPRRRA
Trigger: AGCCCGCCGCCTGGGCCTCCACCTGCCCCAGAGCCT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCTGTGGCTGGGCTGGTaGGTGTGGCTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLWLGW*VWLQAQ
Trigger: CTGAGCCTGCAGCCACACCCACCAGCCCAGCCACAG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGVDSGP*PPPWWW
Trigger: CCACCACCACGGAGGAGGCCAAGGGCCGGAATCCAC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCTGCCTCCAACGTGGTaGCCGGCGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSLPPTW*PAASGQ
Trigger: CTGCCCCGAGGCCGCCGGCCACCACGTTGGAGGCAG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTTCTGCCTCCAACGTaGTGGCCGGCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAALLPPT*WPAASG
Trigger: CCCCGAGGCCGCCGGCCACCACGTTGGAGGCAGAAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSHTPR*AGSGIT
Trigger: TGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTCCTTGACCTGGCTTaGGAGAGGCCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLLDLA*ERPSPK
Trigger: CTTCGGAGATGGCCTCTCCCAAGCCAGGTCAAGGAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGGAGCCGCTGTTCATTaGGCTGGCGCAGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAGAAVH*AGAGRR
Trigger: CCGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGCCAGGACGCTGCGGTaGGCAGGGAACTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGARTLR*AGNLVS
Trigger: AGACACCAAGTTCCCTGCTCACCGCAGCGTCCTGGC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCTGAAGAAGGGACTTaGAGCAGCCAGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSEEGT*SSQDAA
Trigger: CGCAGCGTCCTGGCTGCTTCAAGTCCCTTCTTCAGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGAGCGGCCAAGTTACTaGAGTTGTAAGGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHERPSY*SCKGRR
Trigger: CCGCCTACCCTTACAACTTCAGTAACTTGGCCGCTC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTCCCCCAAACCTCCTTaGCCTGGCTTGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRSPKPP*PGLGEA
Trigger: GGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAAAGCTCCAATCTCTaGTACAGCTGCCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGQSSNL*YSCPVP
Trigger: GGGGACGGGGCAGCTGTAGCAGAGATTGGAGCTTTG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTTTFTT*SGPPRK
Trigger: CTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCTCCCAACAGAAGATaGACTGGTACCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSPNRR*TGTCAP
Trigger: GGGAGCGCAGGTACCAGTGCATCTTCTGTTGGGAGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTVGPLG*PHGEQA
Trigger: CGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTAC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCTCCGTTCCAGCTTCTaGCTCCAACGTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLRSSF*LQRGGR
Trigger: CCGGCCACCACGTTGGAGGCAGAAGCTGGAACGGAG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCAGCAGCATGCCTCTaGCCGTGGCGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTSAACL*PWRLRA
Trigger: TGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTGGGGCAGGGGGTGCTaGTTGAGGATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGWGRGC*LRIHCV
Trigger: TACGCAGTGAATCCTCAAGCAGCACCCCCTGCCCCA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCCTGGACTGGGAAAGTaGTCAGCCACAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHPGLGK*SATEQR
Trigger: CCTCTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACCTCTTCCTTCTGACTaGGATGGCGCCGCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTPLPSD*DGAASA
Trigger: GGCGGACGCGGCGCCATCGCAGTCAGAAGGAAGAGG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGGCAGCTGTGGTGGTaGCAGGGTTGGGTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAARQLWW*QGWVRR
Trigger: GCGCCGCACCCAACCCTGCCACCACCACAGCTGCCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAGAAAACGCAGCTGCTaGGACTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRKRSC*DSWQLQ
Trigger: CTGGAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATGCAAGTCAGGGGCCTaGGCCTCAGCCCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTCKSGA*ASALSP
Trigger: GGGTGACAGGGCTGAGGCCCAGGCCCCTGACTTGCA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCGGCACTGGGCCTCATaGGTCTGCAGCCGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGRHWAS*VCSRLG
Trigger: TCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAAPRRH*ASWVCS
Trigger: GCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCAACAGAAGATGCACTaGTACCTGCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGQQKMH*YLRSPV
Trigger: CACGGGGGAGCGCAGGTACCAGTGCATCTTCTGTTG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAGGCTCTGGGGCAGGTaGAGGCCCAGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSRLWGR*RPRRRA
Trigger: AGCCCGCCGCCTGGGCCTCCACCTGCCCCAGAGCCT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGGTGGTGGCCATGGCTaGCCCTGCAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTGGGHG*PCSGGW
Trigger: CCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCCGTGGTGGTGGCCATaGCTGGCCCTGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSPWWWP*LALQRW
Trigger: CCACCGCTGCAGGGCCAGCCATGGCCACCACCACGG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCCGTGGTGGTGGCCATaGCTGGCCCTGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGPWWWP*LALQRW
Trigger: CCACCGCTGCAGGGCCAGCCATGGCCACCACCACGG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCGTGGTGGTGGCCATaGCTGGCCCTGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPWWWP*LALQRW
Trigger: CCACCGCTGCAGGGCCAGCCATGGCCACCACCACGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTGGCCTCCTCCGTGGTaGTGGCCATGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAWPPPW*WPWLAL
Trigger: CAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTVDSGP*PPPWWW
Trigger: CCACCACCACGGAGGAGGCCAAGGGCCGGAATCCAC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAGGGTGGTGAAGGTCTaGGCACAGTCCCCGCATCGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGRVVKV*AQSPHR
Trigger: CCGATGCGGGGACTGTGCCCAGACCTTCACCACCCT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGAGGGTGGTGAAGGTCTaGGCACAGTCCCCGCATCGG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRRVVKV*AQSPHR
Trigger: CCGATGCGGGGACTGTGCCCAGACCTTCACCACCCT...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGGCAATGACAGGGGTTaGGGTGCCCCCGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTGNDRG*GAPGPL
Trigger: GAGCGGCCCGGGGGCACCCCAACCCCTGTCATTGCC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGGAGCCGCTGTTCATTaGGCTGGCGCAGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGGAAVH*AGAGRR
Trigger: CCGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTGCCCCCATGGACAATaGCAGAGGGGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAACPHGQ*QRGLGG
Trigger: CCCACCCAGCCCCCTCTGTCATTGTCCATGGGGGCA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCCCTATTCGCACAGTaGTCTGACACAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGPLFAQ*SDTVEV
Trigger: CACCTCCACTGTGTCAGATCACTGTGCGAATAGGGG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTGCCTCACCGCTGGATaGGGAGACTTGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGCLTAG*GDLHLL
Trigger: CAAGAGATGCAAGTCTCCTCATCCAGCGGTGAGGCA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGATAGGGTCCTGGAGTaGGGCGGTCTCGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRDRVLE*GGLGSF
Trigger: GAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGGCTCCTCACCCCCTaGAATGATAGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGLLTP*NDRVLE
Trigger: CTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCAGGTAGGACCATGTTaGGAGCAACCGGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRQVGPC*EQPGER
Trigger: CCGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTG...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCCCTGGAGGAAGACTaGGAGGGGAACCTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSLEED*EGNLER
Trigger: TCTTTCGAGGTTCCCCTCTCAGTCTTCCTCCAGGGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCCACCACCAGGCAGTaGGAGCCGGGCGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTSTTRQ*EPGAVD
Trigger: ATCTACAGCGCCCGGCTCGCACTGCCTGGTGGTGGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCTGCGCTCCCCCGTGTaGCACACTTCATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRLRSPV*HTSCFV
Trigger: CACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAG...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCTCCCAACAGAAGATaGACTGGTACCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSPNRR*TGTCAP
Trigger: GGGAGCGCAGGTACCAGTGCATCTTCTGTTGGGAGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTGGCTGGGCTGACTaGTGTGGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSGGWAD*CGWAGG
Trigger: CCCACCAGCCCAGCCACAGCAGTCAGCCCAGCCACC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCCGTGGGCCTCTTGGTaGTTCCGCAGCTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGPWASW*FRSFLR
Trigger: CCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGTGGGTATACATAGCTaGCCCCGCTTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGVGIHS*PRLPLL
Trigger: CAGTAGTGGCAAGCGGGGGCAGCTATGTATACCCAC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGGTGGGGCAGGGGGTaGTGCTTGAGGATTCACTGC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGWWGRG*CLRIHC
Trigger: GCAGTGAATCCTCAAGCAGCACCCCCTGCCCCACCA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTCCAGGACCCGGGGTaGGGAAGAAGCAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAALQDPG*GRSRGR
Trigger: TCTCCCCCTGCTTCTTCCCCACCCCGGGTCCTGGAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACGGCACTGGGCCTCATaGGTCTGCAGCCGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTRHWAS*VCSRLG
Trigger: TCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGGCGGCGGGCTGGCTaGCATTGCCACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERRRAG*HCHRGR
Trigger: CCGGCCCCTGTGGCAATGCCAGCCAGCCCGCCGCCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGCCCAGGCGGCGGGCTaGCTGGCATTGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEAQAAG*LALPQG
Trigger: CCCCTGTGGCAATGCCAGCCAGCCCGCCGCCTGGGC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAATGACAGAGGGGGCTaGGTGGGCAAAAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHNDRGG*VGKSDD
Trigger: GTCATCACTTTTGCCCACCCAGCCCCCTCTGTCATT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGATAACCGAGGCAGCTTaGGACCCTCCTGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRITEAA*DPPVLA
Trigger: GGCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTAT...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTTCTCGTTTCTTGGGTaGCCTCGGGGGAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGFSFLG*PRGSSV
Trigger: TACACTGCTCCCCCGAGGCCACCCAAGAAACGAGAA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAAGGGTGGTGAAGGTCTaGGCACAGTCCCCGCATCGG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTRVVKV*AQSPHR
Trigger: CCGATGCGGGGACTGTGCCCAGACCTTCACCACCCT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCACCTGCCTCACCGCTaGATGAGGAGACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGHLPHR*MRRLAS
Trigger: AGATGCAAGTCTCCTCATCCAGCGGTGAGGCAGGTG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAAAGAGTTGGGGGAGGTaGTGTTGGTGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTKSWGR*CWWGRG
Trigger: CCCCCTGCCCCACCAACACCACCTCCCCCAACTCTT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGTCATGTGCAAATCCTaGGCTTACCCACCCATCCGA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHVMCKS*AYPPIR
Trigger: TCGGATGGGTGGGTAAGCCCAGGATTTGCACATGAC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCTTCCCAGGGAACATaGGGAAAGAGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSSQGT*GKRART
Trigger: AGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGAGCCGCTGTTCATTaGGCTGGCGCAGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGAAVH*AGAGRR
Trigger: CCGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCCAGGACGCTGCGGTaGGCAGGGAACTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAARTLR*AGNLVS
Trigger: AGACACCAAGTTCCCTGCTCACCGCAGCGTCCTGGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGCCCCCATGGACAATaGCAGAGGGGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTCPHGQ*QRGLGG
Trigger: CCCACCCAGCCCCCTCTGTCATTGTCCATGGGGGCA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRTQVSL*DAALDD
Trigger: ATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGT...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGGGCCTCTTCCTTCTaGCTGCGATGGCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGWASSF*LRWRRV
Trigger: GACGCGGCGCCATCGCAGTCAGAAGGAAGAGGCCCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTATCAGAAAACGCAGCTaGTGGGACTCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGIRKRS*WDSWQL
Trigger: GAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCTGAT...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCAAAGCTCCAATCTCTaGTACAGCTGCCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRQSSNL*YSCPVP
Trigger: GGGGACGGGGCAGCTGTAGCAGAGATTGGAGCTTTG...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCCTGAAGGCGGGAGATaGCCAGACGGCGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGPEGGR*PDGAPK
Trigger: CTTTGGGGCGCCGTCTGGGCATCTCCCGCCTTCAGG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEVGPLG*PHGEQA
Trigger: CGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTAC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGTGGCTGGGCTGACTaGTGTGGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGGWAD*CGWAGG
Trigger: CCCACCAGCCCAGCCACAGCAGTCAGCCCAGCCACC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSQSPHR*LRSVRA
Trigger: TGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACCGTGGGCCTCTTGGTaGTTCCGCAGCTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTPWASW*FRSFLR
Trigger: CCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTCCCAGATTTTCCCCTaGCACCGCCAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAASQIFP*HRQVPG
Trigger: GCCGGGAACCTGGCGGTGGCAGGGGAAAATCTGGGA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGGATGGAAGGTCATGTaGAAATCCTGGGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHGWKVM*KSWAYP
Trigger: TGGGTAAGCCCAGGATTTGCACATGACCTTCCATCC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTCTTCCTTCTGACTaGGATGGCGCCGCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPLPSD*DGAASA
Trigger: GGCGGACGCGGCGCCATCGCAGTCAGAAGGAAGAGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGCGAGTCCCTTCTGCTaGGCCTCTTCCTTCGATTCG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRASPFC*ASSFDS
Trigger: CGAATCGAAGGAAGAGGCCCAGCAGAAGGGACTCGC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGCAAGTCAGGGGCCTaGGCCTCAGCCCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCKSGA*ASALSP
Trigger: GGGTGACAGGGCTGAGGCCCAGGCCCCTGACTTGCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGCAAGTCAGGGGCCTaGGCCTCAGCCCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTCKSGA*ASALSP
Trigger: GGGTGACAGGGCTGAGGCCCAGGCCCCTGACTTGCA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCCCGGGCTAATGCCGTaGAAGGCTCGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSPGLMP*KARWWV
Trigger: GACCCACCAGCGAGCCTTCCACGGCATTAGCCCGGG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCCGGGCTAATGCCGTaGAAGGCTCGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPGLMP*KARWWV
Trigger: GACCCACCAGCGAGCCTTCCACGGCATTAGCCCGGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGCTTGGCTGCCCGCATaGGGAGCAGGCGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGAWLPA*GAGGRA
Trigger: AGCTCTACCGCCTGCTCCCCATGCGGGCAGCCAAGC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCTGCTACTGCCCCCATaGACAATGACAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRLLLPP*TMTEGA
Trigger: AGCCCCCTCTGTCATTGTCCATGGGGGCAGTAGCAG...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCTGCTGTGGCTGGGCTaGTGGGTGTGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSLLWLG*WVWLQA
Trigger: AGCCTGCAGCCACACCCACCAGCCCAGCCACAGCAG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTVDSGP*PPPWWW
Trigger: CCACCACCACGGAGGAGGCCAAGGGCCGGAATCCAC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTCCCGCCCACTGGCTTaGCTGTGTAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRSRPLA*LCKSES
Trigger: GGACTCTGACTTACACAGCCAAGCCAGTGGGCGGGA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTGGGCTCTCGGCCGCTaGGGTTTCCTCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSWALGR*GFLPAP
Trigger: AGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGGGAGCCCCCACCGTaGGCCTCTTGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSWEPPP*ASWCFR
Trigger: GCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGAGACTTGCATCTCTTaGGGGGCTTCCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGETCIS*GASSLT
Trigger: TGTCAAGGAGGAAGCCCCCCAAGAGATGCAAGTCTC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGEMIGS*SEAVSE
Trigger: TTCCGAGACCGCCTCACTCCAGGACCCTATCATTTC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAAATTCCTGCACAGGTaGGTATACATAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHKFLHR*VYIAAP
Trigger: GGGGGCAGCTATGTATACCCACCTGTGCAGGAATTT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCCCAATCAAGGCCAGTaGAAATTCCTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGPNQGQ*KFLHRW
Trigger: CCACCTGTGCAGGAATTTCCACTGGCCTTGATTGGG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCGTAGAGACCCACGCTaGGGAAGGATGAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGRRDPR*GRMKPK
Trigger: TTTGGGTTTCATCCTTCCCCAGCGTGGGTCTCTACG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTTCCCTGCCCTGGACTaGGAAAGTGCTCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGFPALD*ESAQPQ
Trigger: CTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTTCTCCATCCCATATaGAGTTCTTCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLLHPI*SSSLLA
Trigger: GGCCAGGAGGGAAGAACTCCATATGGGATGGAGAAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGATTCGCACAGTGATCTaGCACAGTGGAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGIRTVI*HSGGGA
Trigger: GGCTCCACCTCCACTGTGTCAGATCACTGTGCGAAT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAAFSGW*RSGHSP
Trigger: GGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGCCTCACCGCTGGATaGGGAGACTTGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGCLTAG*GDLHLL
Trigger: CAAGAGATGCAAGTCTCCTCATCCAGCGGTGAGGCA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGATAGGGTCCTGGAGTaGGGCGGTCTCGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAADRVLE*GGLGSF
Trigger: GAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGGGCTCCTCACCCCCTaGAATGATAGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAGLLTP*NDRVLE
Trigger: CTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGCTCAGGGTAGAAAGTaGCTTTGGCAGCCCCTATCC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRAQGRK*LWQPLS
Trigger: GGATAGGGGCTGCCAAAGTCACTTTCTACCCTGAGC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCCCTGGAGGAAGACTaGGAGGGGAACCTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSLEED*EGNLER
Trigger: TCTTTCGAGGTTCCCCTCTCAGTCTTCCTCCAGGGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCCTGAAGGCGGGAGATaGCCAGACGGCGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSPEGGR*PDGAPK
Trigger: CTTTGGGGCGCCGTCTGGGCATCTCCCGCCTTCAGG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYVGPLG*PHGEQA
Trigger: CGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTAC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCTCGGGGCAGCCCACTaGCCCCCACACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYLGAAH*PPHWHL
Trigger: GAGGTGCCAGTGTGGGGGGCAGTGGGCTGCCCCGAG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCTCCGTTCCAGCTTCTaGCTCCAACGTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSLRSSF*LQRGGR
Trigger: CCGGCCACCACGTTGGAGGCAGAAGCTGGAACGGAG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEQSPHR*LRSVRA
Trigger: TGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCCGTGGGCCTCTTGGTaGTTCCGCAGCTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAPWASW*FRSFLR
Trigger: CCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGGCCGCTCAGCAGCATaGCTCTGCCCGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYGRSAA*LCPWRL
Trigger: GAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGTGGGTATACATAGCTaGCCCCGCTTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGVGIHS*PRLPLL
Trigger: CAGTAGTGGCAAGCGGGGGCAGCTATGTATACCCAC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTCCCAGATTTTCCCCTaGCACCGCCAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTSQIFP*HRQVPG
Trigger: GCCGGGAACCTGGCGGTGGCAGGGGAAAATCTGGGA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRGPIFP*PGLGKC
Trigger: GCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGGCAGCTGTGGTGGTaGCAGGGTTGGGTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERQLWW*QGWVRR
Trigger: GCGCCGCACCCAACCCTGCCACCACCACAGCTGCCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCGGCACTGGGCCTCATaGGTCTGCAGCCGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGRHWAS*VCSRLG
Trigger: TCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGGCTTGTAGCCTCCATTaGGTGTCTTCTCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGACSLH*VSSHWQ
Trigger: TTGCCAGTGAGAAGACACCCAATGGAGGCTACAAGC...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTAGGCGGCGGGCTGGCTaGCATTGCCACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIRRRAG*HCHRGR
Trigger: CCGGCCCCTGTGGCAATGCCAGCCAGCCCGCCGCCT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGGTATTCTCGTTTCTTaGGTGGCCTCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTGILVS*VASGEQ
Trigger: CTGCTCCCCCGAGGCCACCCAAGAAACGAGAATACC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGGGCTGGTGGGTGTaGCTGCAGGCTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELGWWV*LQAQGE
Trigger: CTCCCCCTGAGCCTGCAGCCACACCCACCAGCCCAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCTGCTGTGGCTGGGCTaGTGGGTGTGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSLLWLG*WVWLQA
Trigger: AGCCTGCAGCCACACCCACCAGCCCAGCCACAGCAG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGGTGGTGGCCATGGCTaGCCCTGCAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYGGGHG*PCSGGW
Trigger: CCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGGGCTCTCGGCCGCTaGGGTTTCCTCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSWALGR*GFLPAP
Trigger: AGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCCACCGTGGGCCTCTTaGTGCTTCCGCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAPPWAS*CFRSFL
Trigger: GAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCACCTGCCTCACCGCTaGATGAGGAGACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGHLPHR*MRRLAS
Trigger: AGATGCAAGTCTCCTCATCCAGCGGTGAGGCAGGTG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAAGAGTTGGGGGAGGTaGTGTTGGTGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSKSWGR*CWWGRG
Trigger: CCCCCTGCCCCACCAACACCACCTCCCCCAACTCTT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAASHTPR*AGSGIT
Trigger: TGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTTGGAATAGGCAATaGCAGGGGTTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPWNRQ*QGLGCP
Trigger: GGGGCACCCCAACCCCTGTCATTGCCTATTCCAAGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCCTTGGAATAGGCAATaGCAGGGGTTGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSPWNRQ*QGLGCP
Trigger: GGGGCACCCCAACCCCTGTCATTGCCTATTCCAAGG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGGCTCCTCACCCCCTaGAATGATAGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSGLLTP*NDRVLE
Trigger: CTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTCTTGCCCTTGGCAGTaGTTGCTGCTAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAASCPWQ*LLLGQP
Trigger: TGGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCAGCGAGTCCCTTCTaGTGGGCCTCTTCCTTCGAT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTSASPF*WASSFD
Trigger: ATCGAAGGAAGAGGCCCAGCAGAAGGGACTCGCTGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAAGCAGCCAGGACGCTaGGGTGAGCAGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSKQPGR*GEQGTW
Trigger: CCAAGTTCCCTGCTCACCGCAGCGTCCTGGCTGCTT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAATCTCTGCTACAGCTaGCCCGTCCCCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTNLCYS*PVPSTT
Trigger: GGTGGTGGAGGGGACGGGGCAGCTGTAGCAGAGATT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAATCTCTGCTACAGCTaGCCCGTCCCCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSNLCYS*PVPSTT
Trigger: GGTGGTGGAGGGGACGGGGCAGCTGTAGCAGAGATT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTGCGCTCCCCCGTGTaGCACACTTCATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLRSPV*HTSCFV
Trigger: CACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGAGATGCACTGGTACCTaGGCTCCCCCGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGRCTGT*APPCAT
Trigger: TGTGGCACACGGGGGAGCGCAGGTACCAGTGCATCT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGCTGGTGGGTGTGGCTaGAGGCTCAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYAGGCG*RLRGRR
Trigger: CCTCCTCCCCCTGAGCCTGCAGCCACACCCACCAGC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTCGGGGCAGCCCACTaGCCCCCACACTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILGAAH*PPHWHL
Trigger: GAGGTGCCAGTGTGGGGGGCAGTGGGCTGCCCCGAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGGTGCCTCCGCTCTGTaGGGGCACGTCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFGASAL*GHVPLG
Trigger: GCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCATAGCTGCCCCCGCTTaGCACTACTGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSIAAPA*HYWGLL
Trigger: GAGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTAT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGTGGGTATACATAGCTaGCCCCGCTTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTVGIHS*PRLPLL
Trigger: CAGTAGTGGCAAGCGGGGGCAGCTATGTATACCCAC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTGCTTGAGGATTCACTaGGTAGCCAAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRCLRIH*VAKDPW
Trigger: CCAGGGGTCTTTGGCTACGCAGTGAATCCTCAAGCA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGGTGGGGCAGGGGGTaGTGCTTGAGGATTCACTGC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTWWGRG*CLRIHC
Trigger: GCAGTGAATCCTCAAGCAGCACCCCCTGCCCCACCA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGGGCCAATATTTCCCTaGCCTGGACTGGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTGPIFP*PGLGKC
Trigger: GCACTTTCCCAGTCCAGGGCAGGGAAATATTGGCCC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTCTGCTTACCTCTTTTaGCTTGGAAGAATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHSAYLF*LGRIWS
Trigger: GCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCCATTTGTCAAATTTaGTCCCCCATACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGPICQI*SPILAL
Trigger: GAGAGCCAGTATGGGGGAGCAAATTTGACAAATGGG...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTTTCCCATGCCTGTTTaGCTCAGAGGAGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGFPMPV*LRGVWV
Trigger: AACCCATACTCCTCTGAGGCAAACAGGCATGGGAAA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSVAFSL*HHPSSQ
Trigger: CTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCAC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGVAFSL*HHPSSQ
Trigger: CTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCAC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGCTGCTGGGACTCCTaGCAACTCCAGGACCCGGGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESCWDS*QLQDPG
Trigger: CCCCGGGTCCTGGAGTTGCCAGGAGTCCCAGCAGCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTGCAGCCGTTTGGGATaGATGAAGCTTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGCSRLG*MKLFPH
Trigger: GTGTGGAAAAAGCTTCATCCATCCCAAACGGCTGCA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCGGTGTGTTGAGGGTTaGAGAAAGGGGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGRCVEG*RKGSLR
Trigger: CCGGAGGCTCCCCTTTCTCCAACCCTCAACACACCG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATAGGCGGCGGGCTGGCTaGCATTGCCACAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRRRAG*HCHRGR
Trigger: CCGGCCCCTGTGGCAATGCCAGCCAGCCCGCCGCCT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCCCAGGCGGCGGGCTaGCTGGCATTGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAQAAG*LALPQG
Trigger: CCCCTGTGGCAATGCCAGCCAGCCCGCCGCCTGGGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGATAACCGAGGCAGCTTaGGACCCTCCTGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGITEAA*DPPVLA
Trigger: GGCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTAT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCCTTGGCCTCCTCCGTaGTGGTGGCCATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYPWPPP*WWPWLA
Trigger: GGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTGCCTCCAACGTGGTaGCCGGCGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLPPTW*PAASGQ
Trigger: CTGCCCCGAGGCCGCCGGCCACCACGTTGGAGGCAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGCCTCCAACGTGGTaGCCGGCGGCCTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLPPTW*PAASGQ
Trigger: CTGCCCCGAGGCCGCCGGCCACCACGTTGGAGGCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGAGACTTGCATCTCTTaGGGGGCTTCCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGETCIS*GASSLT
Trigger: TGTCAAGGAGGAAGCCCCCCAAGAGATGCAAGTCTC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGRSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTTCCCTGCCCTGGACTaGGAAAGTGCTCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAFPALD*ESAQPQ
Trigger: CTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTTTGCTCCCCCATACTaGCTCTCCCCTTGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRFAPPY*LSPCEL
Trigger: TAGCTCACAAGGGGAGAGCCAGTATGGGGGAGCAAA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTTGTCCAAACTAGAATaGAAGCGGCCCAATTTTACC +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLSKLE*KRPNFT
Trigger: GGTAAAATTGGGCCGCTTTCATTCTAGTTTGGACAA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGCATGGTGCCAGCCTaGGAGCACAGCCAACATGGA +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGMVPA*EHSQHG
Trigger: TCCATGTTGGCTGTGCTCTCAGGCTGGCACCATGCC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCATTCGCACAGTGATCTaGCACAGTGGAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAIRTVI*HSGGGA
Trigger: GGCTCCACCTCCACTGTGTCAGATCACTGTGCGAAT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGAGATGCGGCGCTTaGCGATGGCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELRCGA*RWPPPL
Trigger: TAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTCCCCACCAGCCTTTaGTTCCTCCTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLPTSL*FLLILL
Trigger: GAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSAFSGW*RSGHSP
Trigger: GGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCTCAGGGTAGAAAGTaGCTTTGGCAGCCCCTATCC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAAQGRK*LWQPLS
Trigger: GGATAGGGGCTGCCAAAGTCACTTTCTACCCTGAGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCAGGTAGGACCATGTTaGGAGCAACCGGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSQVGPC*EQPGER
Trigger: CCGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTCCCTGGAGGAAGACTaGGAGGGGAACCTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAASLEED*EGNLER
Trigger: TCTTTCGAGGTTCCCCTCTCAGTCTTCCTCCAGGGA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTCTTGCCCTTGGCAGTaGTTGCTGCTAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTSCPWQ*LLLGQP
Trigger: TGGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTCTTGCCCTTGGCAGTaGTTGCTGCTAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGSCPWQ*LLLGQP
Trigger: TGGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTGGGCCTCTTCCTTCTaGCTGCGATGGCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYWASSF*LRWRRV
Trigger: GACGCGGCGCCATCGCAGTCAGAAGGAAGAGGCCCA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAATCTCTGCTACAGCTaGCCCGTCCCCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSNLCYS*PVPSTT
Trigger: GGTGGTGGAGGGGACGGGGCAGCTGTAGCAGAGATT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCCTGAAGGCGGGAGATaGCCAGACGGCGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYPEGGR*PDGAPK
Trigger: CTTTGGGGCGCCGTCTGGGCATCTCCCGCCTTCAGG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGTCCTCTTCAGGCTaGGAGGTGGCCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELSSSG*EVAMGA
Trigger: AGCCCCCATGGCCACCTCGCAGCCTGAAGAGGACAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGGGCCTCATGGGTCTaGAGCCGTTTGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGWASWV*SRLGWM
Trigger: CATCCATCCCAAACGGCTGCAGACCCATGAGGCCCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGGGCCTCATGGGTCTaGAGCCGTTTGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTWASWV*SRLGWM
Trigger: CATCCATCCCAAACGGCTGCAGACCCATGAGGCCCA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTTLHAS*GTPPEQ
Trigger: TTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGTGTGCCACACTTCATaGTTCGTGCGGTACTCCGCC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTVCHTS*FVRYSA
Trigger: GGCGGAGTACCGCACGAAGCATGAAGTGTGGCACAC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGTGTGCCACACTTCATaGTTCGTGCGGTACTCCGCC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGVCHTS*FVRYSA
Trigger: GGCGGAGTACCGCACGAAGCATGAAGTGTGGCACAC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAGATGCACTGGTACCTaGGCTCCCCCGTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSRCTGT*APPCAT
Trigger: TGTGGCACACGGGGGAGCGCAGGTACCAGTGCATCT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTCAGCAGCATGCCTCTaGCCGTGGCGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSAACL*PWRLRA
Trigger: TGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGGCCGCTCAGCAGCATaGCTCTGCCCGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHGRSAA*LCPWRL
Trigger: GAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGGTGGGGCAGGGGGTaGTGCTTGAGGATTCACTGC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSWWGRG*CLRIHC
Trigger: GCAGTGAATCCTCAAGCAGCACCCCCTGCCCCACCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGGATGGAAGGTCATGTaGAAATCCTGGGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRGWKVM*KSWAYP
Trigger: TGGGTAAGCCCAGGATTTGCACATGACCTTCCATCC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACTAAATTTTGCGTGCTaGGGCACAGAACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTLNFAC*GTEPVA
Trigger: GGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGATTCTAAATTTTGCGTaGTGCGGCACAGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGILNFA*CGTEPV
Trigger: CACTGGTTCTGTGCCGCAGCACGCAAAATTTAGAAT...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCGGCCGCTCCGGTTTTaGCCGCCTCCAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRPLRF*PPPAPA
Trigger: AGCCGGAGCTGGAGGCGGGCAAAACCGGAGCGGCCG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCACACATACAGCACGTaGCCGCCCACCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSHTYST*PPTTFT
Trigger: GGTGAAGGTGGTGGGCGGCCACGTGCTGTATGTGTG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCAACAGAAGATGCACTaGTACCTGCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSQQKMH*YLRSPV
Trigger: CACGGGGGAGCGCAGGTACCAGTGCATCTTCTGTTG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCAACAGAAGATGCACTaGTACCTGCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTQQKMH*YLRSPV
Trigger: CACGGGGGAGCGCAGGTACCAGTGCATCTTCTGTTG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCGGTGTGTTGAGGGTTaGAGAAAGGGGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSRCVEG*RKGSLR
Trigger: CCGGAGGCTCCCCTTTCTCCAACCCTCAACACACCG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAAATGACAGAGGGGGCTaGGTGGGCAAAAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTNDRGG*VGKSDD
Trigger: GTCATCACTTTTGCCCACCCAGCCCCCTCTGTCATT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTATTCTCGTTTCTTaGGTGGCCTCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSGILVS*VASGEQ
Trigger: CTGCTCCCCCGAGGCCACCCAAGAAACGAGAATACC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGGTGGTGGCCATGGCTaGCCCTGCAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHGGGHG*PCSGGW
Trigger: CCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTGGCCTCCTCCGTGGTaGTGGCCATGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIWPPPW*WPWLAL
Trigger: CAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCCTTGGCCTCCTCCGTaGTGGTGGCCATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIPWPPP*WWPWLA
Trigger: GGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTTCTGCCTCCAACGTaGTGGCCGGCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLLPPT*WPAASG
Trigger: CCCCGAGGCCGCCGGCCACCACGTTGGAGGCAGAAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCCACCGTGGGCCTCTTaGTGCTTCCGCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSPPWAS*CFRSFL
Trigger: GAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCATGCCTCTGCCCGTaGCGGCTCAGGGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFACLCP*RLRAAA
Trigger: CGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCTCCTTGACCTGGCTTaGGAGAGGCCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGLLDLA*ERPSPK
Trigger: CTTCGGAGATGGCCTCTCCCAAGCCAGGTCAAGGAG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCTCCTTGACCTGGCTTaGGAGAGGCCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSLLDLA*ERPSPK
Trigger: CTTCGGAGATGGCCTCTCCCAAGCCAGGTCAAGGAG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTTCCCTGCCCTGGACTaGGAAAGTGCTCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGFPALD*ESAQPQ
Trigger: CTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGTCATGTGCAAATCCTaGGCTTACCCACCCATCCGA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTVMCKS*AYPPIR
Trigger: TCGGATGGGTGGGTAAGCCCAGGATTTGCACATGAC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATTTGCTCCCCCATACTaGCTCTCCCCTTGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTFAPPY*LSPCEL
Trigger: TAGCTCACAAGGGGAGAGCCAGTATGGGGGAGCAAA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGTCTTGTTGGTTTATTaGCCTACAGAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHVLLVY*PTELDT
Trigger: TGTGTCCAACTCTGTAGGCCAATAAACCAACAAGAC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTATTCGCACAGTGATCTaGCACAGTGGAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSIRTVI*HSGGGA
Trigger: GGCTCCACCTCCACTGTGTCAGATCACTGTGCGAAT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCCCCTATTCGCACAGTaGTCTGACACAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGPLFAQ*SDTVEV
Trigger: CACCTCCACTGTGTCAGATCACTGTGCGAATAGGGG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEAFSGW*RSGHSP
Trigger: GGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTGCCTCACCGCTGGATaGGGAGACTTGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSCLTAG*GDLHLL
Trigger: CAAGAGATGCAAGTCTCCTCATCCAGCGGTGAGGCA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGCCTCACCGCTGGATaGGGAGACTTGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCLTAG*GDLHLL
Trigger: CAAGAGATGCAAGTCTCCTCATCCAGCGGTGAGGCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTCCCTGGAGGAAGACTaGGAGGGGAACCTCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGSLEED*EGNLER
Trigger: TCTTTCGAGGTTCCCCTCTCAGTCTTCCTCCAGGGA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGAGACAGAGGAGGAATaGAGGAGTGACTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAETEEE*RSDSSV
Trigger: CACAGAGGAGTCACTCCTTCATTCCTCCTCTGTCTC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCATCAGAAAACGCAGCTaGTGGGACTCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAIRKRS*WDSWQL
Trigger: GAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCTGAT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTCCACCACCAGGCAGTaGGAGCCGGGCGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSTTRQ*EPGAVD
Trigger: ATCTACAGCGCCCGGCTCGCACTGCCTGGTGGTGGA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAATLHAS*GTPPEQ
Trigger: TTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGGTGGCTGGGCTGACTaGTGTGGCTGGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHGGWAD*CGWAGG
Trigger: CCCACCAGCCCAGCCACAGCAGTCAGCCCAGCCACC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHQSPHR*LRSVRA
Trigger: TGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIAAQGS*GLAHLG
Trigger: GCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGGGGCAGGGGGTGCTaGTTGAGGATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSWGRGC*LRIHCV
Trigger: TACGCAGTGAATCCTCAAGCAGCACCCCCTGCCCCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTCCAGGACCCGGGGTaGGGAAGAAGCAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILQDPG*GRSRGR
Trigger: TCTCCCCCTGCTTCTTCCCCACCCCGGGTCCTGGAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAGAAAACGCAGCTGCTaGGACTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTRKRSC*DSWQLQ
Trigger: CTGGAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTGCAGCCGTTTGGGATaGATGAAGCTTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGCSRLG*MKLFPH
Trigger: GTGTGGAAAAAGCTTCATCCATCCCAAACGGCTGCA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAPRRH*ASWVCS
Trigger: GCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGACAGAGGGGGCTGGGTaGGCAAAAGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGTEGAG*AKVMTE
Trigger: CTCTGTCATCACTTTTGCCCACCCAGCCCCCTCTGT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGTATTCTCGTTTCTTaGGTGGCCTCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGILVS*VASGEQ
Trigger: CTGCTCCCCCGAGGCCACCCAAGAAACGAGAATACC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTCAGGGGGAGGAGGTaGGTATTCTCGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLRGRR*VFSFLG
Trigger: CCCAAGAAACGAGAATACCCACCTCCTCCCCCTGAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGGGCTGGTGGGTGTaGCTGCAGGCTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLGWWV*LQAQGE
Trigger: CTCCCCCTGAGCCTGCAGCCACACCCACCAGCCCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTGCTGTGGCTGGGCTaGTGGGTGTGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILLWLG*WVWLQA
Trigger: AGCCTGCAGCCACACCCACCAGCCCAGCCACAGCAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTCCCGCCCACTGGCTTaGCTGTGTAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSRPLA*LCKSES
Trigger: GGACTCTGACTTACACAGCCAAGCCAGTGGGCGGGA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTACCAATCCCGCCCACTaGCTTGGCTGTGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSTNPAH*LGCVSQ
Trigger: CTGACTTACACAGCCAAGCCAGTGGGCGGGATTGGT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCACCAATCCCGCCCACTaGCTTGGCTGTGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTTNPAH*LGCVSQ
Trigger: CTGACTTACACAGCCAAGCCAGTGGGCGGGATTGGT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAGTGATCTGACACAGTaGAGGTGGAGCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTSDLTQ*RWSLQL
Trigger: CAGCTGCAGGCTCCACCTCCACTGTGTCAGATCACT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRSLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCTCCTTGACCTGGCTTaGGAGAGGCCATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSLLDLA*ERPSPK
Trigger: CTTCGGAGATGGCCTCTCCCAAGCCAGGTCAAGGAG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCCCCTATCATTTTTCTaGCTATTTGGTCTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGPLSFF*LFGLVW
Trigger: CCAGACTAGACCAAATAGCCAGAAAAATGATAGGGG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTTTGCTCCCCCATACTaGCTCTCCCCTTGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAFAPPY*LSPCEL
Trigger: TAGCTCACAAGGGGAGAGCCAGTATGGGGGAGCAAA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGCCAGGACGCTGCGGTaGGCAGGGAACTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIARTLR*AGNLVS
Trigger: AGACACCAAGTTCCCTGCTCACCGCAGCGTCCTGGC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTGCCCCCATGGACAATaGCAGAGGGGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFCPHGQ*QRGLGG
Trigger: CCCACCCAGCCCCCTCTGTCATTGTCCATGGGGGCA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCAGGTAGGACCATGTTaGGAGCAACCGGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYQVGPC*EQPGER
Trigger: CCGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSRRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGAGACAGAGGAGGAATaGAGGAGTGACTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSETEEE*RSDSSV
Trigger: CACAGAGGAGTCACTCCTTCATTCCTCCTCTGTCTC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCATCAGAAAACGCAGCTaGTGGGACTCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTIRKRS*WDSWQL
Trigger: GAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCTGAT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGATCAGAAAACGCAGCTaGTGGGACTCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGIRKRS*WDSWQL
Trigger: GAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCTGAT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTGGGCCTCATGGGTCTaGAGCCGTTTGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEWASWV*SRLGWM
Trigger: CATCCATCCCAAACGGCTGCAGACCCATGAGGCCCA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHTTFTT*SGPPRK
Trigger: CTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCCACGAGTGTACATTaGTGTGTCTCTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAATSVH*CVSSDW
Trigger: CCAGTCTGAAGAGACACAGCAATGTACACTCGTGGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTCTCCCAACAGAAGATaGACTGGTACCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSPNRR*TGTCAP
Trigger: GGGAGCGCAGGTACCAGTGCATCTTCTGTTGGGAGA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCGGGCTGGCTGGCATTaGCACAGGGGCCGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRAGWH*HRGRCV
Trigger: AACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGGGCAGCTGCGGTCTTaGACACCTTGGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFGQLRS*TPWRSG
Trigger: CCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFAAQGS*GLAHLG
Trigger: GCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGCTTGAGGATTCACTaGGTAGCCAAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCLRIH*VAKDPW
Trigger: CCAGGGGTCTTTGGCTACGCAGTGAATCCTCAAGCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGTATATTGCTCAGTTaGCCCAAGGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAASILLS*PKGWRR
Trigger: CCTTCTCCAGCCCTTGGGGCAACTGAGCAATATACT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATTTCCCATGCCTGTTTaGCTCAGAGGAGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTFPMPV*LRGVWV
Trigger: AACCCATACTCCTCTGAGGCAAACAGGCATGGGAAA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGATTCTAAATTTTGCGTaGTGCGGCACAGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGILNFA*CGTEPV
Trigger: CACTGGTTCTGTGCCGCAGCACGCAAAATTTAGAAT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTCCAGGACCCGGGGTaGGGAAGAAGCAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLQDPG*GRSRGR
Trigger: TCTCCCCCTGCTTCTTCCCCACCCCGGGTCCTGGAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTGTGTCTCTTCAGACTaGACAGGGTCACGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAACVSSD*TGSRRN
Trigger: GTTCCTACGTGACCCTGTCCAGTCTGAAGAGACACA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCCCGGGCTAATGCCGTaGAAGGCTCGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFPGLMP*KARWWV
Trigger: GACCCACCAGCGAGCCTTCCACGGCATTAGCCCGGG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCTTGGCTGCCCGCATaGGGAGCAGGCGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAWLPA*GAGGRA
Trigger: AGCTCTACCGCCTGCTCCCCATGCGGGCAGCCAAGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGTGGCTGGGCTGGTaGGTGTGGCTGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLWLGW*VWLQAQ
Trigger: CTGAGCCTGCAGCCACACCCACCAGCCCAGCCACAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGGTGGTGGCCATGGCTaGCCCTGCAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGGGGHG*PCSGGW
Trigger: CCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCGTGGTGGTGGCCATaGCTGGCCCTGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPWWWP*LALQRW
Trigger: CCACCGCTGCAGGGCCAGCCATGGCCACCACCACGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFVDSGP*PPPWWW
Trigger: CCACCACCACGGAGGAGGCCAAGGGCCGGAATCCAC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAGTGATCTGACACAGTaGAGGTGGAGCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSDLTQ*RWSLQL
Trigger: CAGCTGCAGGCTCCACCTCCACTGTGTCAGATCACT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTGGGCTCTCGGCCGCTaGGGTTTCCTCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHWALGR*GFLPAP
Trigger: AGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCACCTGCCTCACCGCTaGATGAGGAGACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSHLPHR*MRRLAS
Trigger: AGATGCAAGTCTCCTCATCCAGCGGTGAGGCAGGTG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCCCAATCAAGGCCAGTaGAAATTCCTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSPNQGQ*KFLHRW
Trigger: CCACCTGTGCAGGAATTTCCACTGGCCTTGATTGGG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCCAATCAAGGCCAGTaGAAATTCCTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPNQGQ*KFLHRW
Trigger: CCACCTGTGCAGGAATTTCCACTGGCCTTGATTGGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTAAGAGTTGGGGGAGGTaGTGTTGGTGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIKSWGR*CWWGRG
Trigger: CCCCCTGCCCCACCAACACCACCTCCCCCAACTCTT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGATATGGGGAGGAACATaGAAGATCCAAAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGIWGGT*KIQRHG
Trigger: TCCATGCCTTTGGATCTTCCATGTTCCTCCCCATAT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCTATTTGGTCTAGTCTaGGAGAAACCATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGLFGLV*EKPSGK
Trigger: TTTTCCTGATGGTTTCTCCCAGACTAGACCAAATAG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGTRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAAPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTCTTCCCAGGGAACATaGGGAAAGAGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSSSQGT*GKRART
Trigger: AGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCCAGGACGCTGCGGTaGGCAGGGAACTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFARTLR*AGNLVS
Trigger: AGACACCAAGTTCCCTGCTCACCGCAGCGTCCTGGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCAGGTTATAGTAAGTaGCAAAGGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSGYSK*QRSPNR
Trigger: TCTGTTGGGAGACCTTTGTCACTTACTATAACCTGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCCCCTATTCGCACAGTaGTCTGACACAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEPLFAQ*SDTVEV
Trigger: CACCTCCACTGTGTCAGATCACTGTGCGAATAGGGG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTGAGATGCGGCGCTTaGCGATGGCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLRCGA*RWPPPL
Trigger: TAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGAGATGCGGCGCTTaGCGATGGCCTCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLRCGA*RWPPPL
Trigger: TAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYTQVSL*DAALDD
Trigger: ATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGAGCGGCCAAGTTACTaGAGTTGTAAGGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEERPSY*SCKGRR
Trigger: CCGCCTACCCTTACAACTTCAGTAACTTGGCCGCTC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAGCTGGTGGGGGCTGTaGGTAGAGATTCAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSWWGL*VEIQVK
Trigger: CTTAACCTGAATCTCTACTCACAGCCCCCACCAGCT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTGAGGAAGGTGTCTTaGTACAAGGGAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLRKVS*YKGNRD
Trigger: GTCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGAAATACAGGGACCCTaGCCAGGGTTAACTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGEIQGP*PGLTSA
Trigger: TGCACTAGTTAACCCTGGTCAGGGTCCCTGTATTTC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGAACCTTAAGCCTCAGTaGAAAAGGGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGNLKPQ*KREQRG
Trigger: TCCTCGCTGCTCCCTTTTGCACTGAGGCTTAAGGTT...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCACCACCAGGCAGTaGGAGCCGGGCGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSTTRQ*EPGAVD
Trigger: ATCTACAGCGCCCGGCTCGCACTGCCTGGTGGTGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCAAAGCTCCAATCTCTaGTACAGCTGCCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYQSSNL*YSCPVP
Trigger: GGGGACGGGGCAGCTGTAGCAGAGATTGGAGCTTTG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGTGTGCCACACTTCATaGTTCGTGCGGTACTCCGCC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYVCHTS*FVRYSA
Trigger: GGCGGAGTACCGCACGAAGCATGAAGTGTGGCACAC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTATAGCTGCCCCCGCTTaGCACTACTGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFIAAPA*HYWGLL
Trigger: GAGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTAT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTGGGGCAGGGGGTGCTaGTTGAGGATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYWGRGC*LRIHCV
Trigger: TACGCAGTGAATCCTCAAGCAGCACCCCCTGCCCCA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCCTGGACTGGGAAAGTaGTCAGCCACAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEPGLGK*SATEQR
Trigger: CCTCTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCACAATCTCATTTGTTaGCCAGAACCACCACATTCT +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGHNLIC*PEPPHS
Trigger: AGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGCGAGTCCCTTCTGCTaGGCCTCTTCCTTCGATTCG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYASPFC*ASSFDS
Trigger: CGAATCGAAGGAAGAGGCCCAGCAGAAGGGACTCGC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGGACGGCGGGGGCATaGGACGGGTCCGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGRTAGA*DGSVTS
Trigger: AGAGGTGACGGACCCGTCCCATGCCCCCGCCGTCCT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGAAAACGCAGCTGCTaGGACTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERKRSC*DSWQLQ
Trigger: CTGGAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGAPRRH*ASWVCS
Trigger: GCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAATGACAGAGGGGGCTaGGTGGGCAAAAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSNDRGG*VGKSDD
Trigger: GTCATCACTTTTGCCCACCCAGCCCCCTCTGTCATT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCTGCTACTGCCCCCATaGACAATGACAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYLLLPP*TMTEGA
Trigger: AGCCCCCTCTGTCATTGTCCATGGGGGCAGTAGCAG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCTGGGCTGGTGGGTGTaGCTGCAGGCTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGLGWWV*LQAQGE
Trigger: CTCCCCCTGAGCCTGCAGCCACACCCACCAGCCCAG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSEMIGS*SEAVSE
Trigger: TTCCGAGACCGCCTCACTCCAGGACCCTATCATTTC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTAAGAGTTGGGGGAGGTaGTGTTGGTGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFKSWGR*CWWGRG
Trigger: CCCCCTGCCCCACCAACACCACCTCCCCCAACTCTT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCCCACATCGCCCTTCTaGGTTCTCTCAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIPTSPF*VLSTPA
Trigger: GGCAGGGGTTGAGAGAACCCAGAAGGGCGATGTGGG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGTCTGGTCCAGGCCCTaGGCCACAAAGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEVWSRP*ATKNGM
Trigger: CATTCCATTCTTTGTGGCCCAGGGCCTGGACCAGAC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGGTCTTGTTGGTTTATTaGCCTACAGAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRVLLVY*PTELDT
Trigger: TGTGTCCAACTCTGTAGGCCAATAAACCAACAAGAC...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATTGTCCAAACTAGAATaGAAGCGGCCCAATTTTACC +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTLSKLE*KRPNFT
Trigger: GGTAAAATTGGGCCGCTTTCATTCTAGTTTGGACAA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGGCATGGTGCCAGCCTaGGAGCACAGCCAACATGGA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHGMVPA*EHSQHG
Trigger: TCCATGTTGGCTGTGCTCTCAGGCTGGCACCATGCC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCCCCTATTCGCACAGTaGTCTGACACAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYPLFAQ*SDTVEV
Trigger: CACCTCCACTGTGTCAGATCACTGTGCGAATAGGGG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCAGGTAGGACCATGTTaGGAGCAACCGGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHQVGPC*EQPGER
Trigger: CCGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGGCGGGTCATTAGGTaGGAGAGATGGTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERRVIR*ERWFPL
Trigger: TAGGGGAAACCATCTCTCTCACCTAATGACCCGCCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCTGAAGGCGGGAGATaGCCAGACGGCGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPEGGR*PDGAPK
Trigger: CTTTGGGGCGCCGTCTGGGCATCTCCCGCCTTCAGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGETLHAS*GTPPEQ
Trigger: TTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTGGGGCAGGGGGTGCTaGTTGAGGATTCACTGCGTA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIWGRGC*LRIHCV
Trigger: TACGCAGTGAATCCTCAAGCAGCACCCCCTGCCCCA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCCCATTTGTCAAATTTaGTCCCCCATACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSPICQI*SPILAL
Trigger: GAGAGCCAGTATGGGGGAGCAAATTTGACAAATGGG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTTTCCCATGCCTGTTTaGCTCAGAGGAGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGFPMPV*LRGVWV
Trigger: AACCCATACTCCTCTGAGGCAAACAGGCATGGGAAA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACACAATCTCATTTGTTaGCCAGAACCACCACATTCT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTHNLIC*PEPPHS
Trigger: AGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHVAFSL*HHPSSQ
Trigger: CTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCAC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGCTGCTGGGACTCCTaGCAACTCCAGGACCCGGGG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSCWDS*QLQDPG
Trigger: CCCCGGGTCCTGGAGTTGCCAGGAGTCCCAGCAGCT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATAGAAAACGCAGCTGCTaGGACTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYRKRSC*DSWQLQ
Trigger: CTGGAGTTGCCAGGAGTCCCAGCAGCTGCGTTTTCT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGCAGCCGTTTGGGATaGATGAAGCTTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCSRLG*MKLFPH
Trigger: GTGTGGAAAAAGCTTCATCCATCCCAAACGGCTGCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATACAGAGGGGGCTGGGTaGGCAAAAGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYTEGAG*AKVMTE
Trigger: CTCTGTCATCACTTTTGCCCACCCAGCCCCCTCTGT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTGCTACTGCCCCCATaGACAATGACAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILLLPP*TMTEGA
Trigger: AGCCCCCTCTGTCATTGTCCATGGGGGCAGTAGCAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATACCAATCCCGCCCACTaGCTTGGCTGTGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYTNPAH*LGCVSQ
Trigger: CTGACTTACACAGCCAAGCCAGTGGGCGGGATTGGT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTGGGCTCTCGGCCGCTaGGGTTTCCTCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGWALGR*GFLPAP
Trigger: AGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCCACCGTGGGCCTCTTaGTGCTTCCGCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFPPWAS*CFRSFL
Trigger: GAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEEMIGS*SEAVSE
Trigger: TTCCGAGACCGCCTCACTCCAGGACCCTATCATTTC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCAAATTCCTGCACAGGTaGGTATACATAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSKFLHR*VYIAAP
Trigger: GGGGGCAGCTATGTATACCCACCTGTGCAGGAATTT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCCCACATCGCCCTTCTaGGTTCTCTCAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHPTSPF*VLSTPA
Trigger: GGCAGGGGTTGAGAGAACCCAGAAGGGCGATGTGGG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGTGCTAGGAAGCAACTaGGAAGGGCTTAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSVLGSN*EGLRES
Trigger: GCTTTCTCTAAGCCCTTCCCAGTTGCTTCCTAGCAC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLGHKE*NVLGSN
Trigger: GTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSLGHKE*NVLGSN
Trigger: GTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSHTPR*AGSGIT
Trigger: TGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCTATTTGGTCTAGTCTaGGAGAAACCATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGLFGLV*EKPSGK
Trigger: TTTTCCTGATGGTTTCTCCCAGACTAGACCAAATAG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGCCTCAGAGGAGTATaGGTTAAGGATATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCLRGV*VKDIGA
Trigger: TGCCCCTATATCCTTAACCCATACTCCTCTGAGGCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGCCTCAGAGGAGTATaGGTTAAGGATATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTCLRGV*VKDIGA
Trigger: TGCCCCTATATCCTTAACCCATACTCCTCTGAGGCA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCTTCCCAGGGAACATaGGGAAAGAGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESSQGT*GKRART
Trigger: AGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTATTCGCACAGTGATCTaGCACAGTGGAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIIRTVI*HSGGGA
Trigger: GGCTCCACCTCCACTGTGTCAGATCACTGTGCGAAT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFTQVSL*DAALDD
Trigger: ATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGAGCGGCCAAGTTACTaGAGTTGTAAGGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIERPSY*SCKGRR
Trigger: CCGCCTACCCTTACAACTTCAGTAACTTGGCCGCTC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGAGGAAGGTGTCTTaGTACAAGGGAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELRKVS*YKGNRD
Trigger: GTCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTCKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCTTGCCCTTGGCAGTaGTTGCTGCTAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSCPWQ*LLLGQP
Trigger: TGGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCTGTCCTCTTCAGGCTaGGAGGTGGCCATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGLSSSG*EVAMGA
Trigger: AGCCCCCATGGCCACCTCGCAGCCTGAAGAGGACAG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTGGGCCTCATGGGTCTaGAGCCGTTTGGGATGGATG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFWASWV*SRLGWM
Trigger: CATCCATCCCAAACGGCTGCAGACCCATGAGGCCCA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGTGTGCCACACTTCATaGTTCGTGCGGTACTCCGCC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHVCHTS*FVRYSA
Trigger: GGCGGAGTACCGCACGAAGCATGAAGTGTGGCACAC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGATAGCTGCCCCCGCTTaGCACTACTGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGIAAPA*HYWGLL
Trigger: GAGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTAT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTRWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTTTCCCATGCCTGTTTaGCTCAGAGGAGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSFPMPV*LRGVWV
Trigger: AACCCATACTCCTCTGAGGCAAACAGGCATGGGAAA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGCAGCCGTTTGGGATaGATGAAGCTTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSCSRLG*MKLFPH
Trigger: GTGTGGAAAAAGCTTCATCCATCCCAAACGGCTGCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTGTGTCTCTTCAGACTaGACAGGGTCACGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGECVSSD*TGSRRN
Trigger: GTTCCTACGTGACCCTGTCCAGTCTGAAGAGACACA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCTTGTAGGGCCGCTTaGCTGCCCGCATGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSCRAA*LPAWGA
Trigger: TGCTCCCCATGCGGGCAGCCAAGCGGCCCTACAAGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGCTACTGCCCCCATaGACAATGACAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLLLPP*TMTEGA
Trigger: AGCCCCCTCTGTCATTGTCCATGGGGGCAGTAGCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTCAGGGGGAGGAGGTaGGTATTCTCGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILRGRR*VFSFLG
Trigger: CCCAAGAAACGAGAATACCCACCTCCTCCCCCTGAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTGGCCTCCTCCGTGGTaGTGGCCATGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVWPPPW*WPWLAL
Trigger: CAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGTCCTTCCAGCCCGTaGATTCCGGCCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSPSSP*IPALGL
Trigger: GAGGCCAAGGGCCGGAATCCACGGGCTGGAAGGACT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCCGCCCACTGGCTTaGCTGTGTAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSRPLA*LCKSES
Trigger: GGACTCTGACTTACACAGCCAAGCCAGTGGGCGGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTACCAATCCCGCCCACTaGCTTGGCTGTGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDITNPAH*LGCVSQ
Trigger: CTGACTTACACAGCCAAGCCAGTGGGCGGGATTGGT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTAGTGATCTGACACAGTaGAGGTGGAGCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDISDLTQ*RWSLQL
Trigger: CAGCTGCAGGCTCCACCTCCACTGTGTCAGATCACT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGGTATCACAATGGTCTaGTCCAGGCCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFGITMV*SRPWAT
Trigger: TGTGGCCCAGGGCCTGGACCAGACCATTGTGATACC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCAAACCTCCTTGACCTaGCTTGGGAGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIQTSLT*LGRGHL
Trigger: GAGATGGCCTCTCCCAAGCCAGGTCAAGGAGGTTTG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAALPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCTTCTCCATCCCATATaGAGTTCTTCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYLLHPI*SSSLLA
Trigger: GGCCAGGAGGGAAGAACTCCATATGGGATGGAGAAG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTCTTCCCAGGGAACATaGGGAAAGAGGGCACGAACT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSSQGT*GKRART
Trigger: AGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGGCATGGTGCCAGCCTaGGAGCACAGCCAACATGGA +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGGMVPA*EHSQHG
Trigger: TCCATGTTGGCTGTGCTCTCAGGCTGGCACCATGCC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCTCAGGTTATAGTAAGTaGCAAAGGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTSGYSK*QRSPNR
Trigger: TCTGTTGGGAGACCTTTGTCACTTACTATAACCTGA...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCTCAGGGTAGAAAGTaGCTTTGGCAGCCCCTATCC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAQGRK*LWQPLS
Trigger: GGATAGGGGCTGCCAAAGTCACTTTCTACCCTGAGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGAGCGGCCAAGTTACTaGAGTTGTAAGGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHERPSY*SCKGRR
Trigger: CCGCCTACCCTTACAACTTCAGTAACTTGGCCGCTC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGAGACAGAGGAGGAATaGAGGAGTGACTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIETEEE*RSDSSV
Trigger: CACAGAGGAGTCACTCCTTCATTCCTCCTCTGTCTC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAATTTTGACCTATTCTaGAGTTCCAATTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: LPPKAMILPLAVIAARAANFDLF*SSNSPV
Trigger: GACCGGAGAATTGGAACTTCAGAATAGGTCAAAATT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDITLHAS*GTPPEQ
Trigger: TTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCTCCCAACAGAAGATaGACTGGTACCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSPNRR*TGTCAP
Trigger: GGGAGCGCAGGTACCAGTGCATCTTCTGTTGGGAGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCGTGGGCCTCTTGGTaGTTCCGCAGCTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPWASW*FRSFLR
Trigger: CCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATAGTATATTGCTCAGTTaGCCCAAGGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSILLS*PKGWRR
Trigger: CCTTCTCCAGCCCTTGGGGCAACTGAGCAATATACT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCCTGGACTGGGAAAGTaGTCAGCCACAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFPGLGK*SATEQR
Trigger: CCTCTGTTCTGTGGCTGAGCACTTTCCCAGTCCAGG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTCTGCTTACCTCTTTTaGCTTGGAAGAATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSAYLF*LGRIWS
Trigger: GCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCACAATCTCATTTGTTaGCCAGAACCACCACATTCT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSHNLIC*PEPPHS
Trigger: AGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGTGGCCTTCTCACTCTaGCACCACCCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGVAFSL*HHPSSQ
Trigger: CTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCAC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCCCGGGCTAATGCCGTaGAAGGCTCGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVPGLMP*KARWWV
Trigger: GACCCACCAGCGAGCCTTCCACGGCATTAGCCCGGG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGCTTGTAGCCTCCATTaGGTGTCTTCTCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYACSLH*VSSHWQ
Trigger: TTGCCAGTGAGAAGACACCCAATGGAGGCTACAAGC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATACAGAGGGGGCTGGGTaGGCAAAAGTGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHTEGAG*AKVMTE
Trigger: CTCTGTCATCACTTTTGCCCACCCAGCCCCCTCTGT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGATAACCGAGGCAGCTTaGGACCCTCCTGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGITEAA*DPPVLA
Trigger: GGCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTAT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTTCTCGTTTCTTGGGTaGCCTCGGGGGAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHFSFLG*PRGSSV
Trigger: TACACTGCTCCCCCGAGGCCACCCAAGAAACGAGAA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTTCTCGTTTCTTGGGTaGCCTCGGGGGAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFFSFLG*PRGSSV
Trigger: TACACTGCTCCCCCGAGGCCACCCAAGAAACGAGAA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTCAGGGGGAGGAGGTaGGTATTCTCGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLRGRR*VFSFLG
Trigger: CCCAAGAAACGAGAATACCCACCTCCTCCCCCTGAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCATGCCTCTGCCCGTaGCGGCTCAGGGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPACLCP*RLRAAA
Trigger: CGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCCACATCGCCCTTCTaGGTTCTCTCAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPTSPF*VLSTPA
Trigger: GGCAGGGGTTGAGAGAACCCAGAAGGGCGATGTGGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGGGCCACAAAGAATaGAATGTGCTAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELGHKE*NVLGSN
Trigger: GTTGCTTCCTAGCACATTCCATTCTTTGTGGCCCAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSTRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTCGTCACTCAGGCTGTaGCCAAGACCAAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSSLRL*PRPRKV
Trigger: CACTTTTCTTGGTCTTGGCCACAGCCTGAGTGACGA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGTTCATTTGTCTTGTTaGTTTATTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: SATTRLPREHGERGHELTVHLSC*FIGLQS
Trigger: ACTCTGTAGGCCAATAAACCAACAAGACAAATGAAC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
3UTR CAA 72 bp CTCTTTTGCCTTGGAAGAATCTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCAATATTTCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LFCLGRIWSSLD*GVKIGPIFPCP
Trigger: AGGGCAGGGAAATATTGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCAGATTCTTCCAAGGCAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCTGAAGAAGGGACTTaGAGCAGCCAGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSEEGT*SSQDAA
Trigger: CGCAGCGTCCTGGCTGCTTCAAGTCCCTTCTTCAGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGAT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGTQVSL*DAALDD
Trigger: ATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCTCCCCACCAGCCTTTaGTTCCTCCTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGLPTSL*FLLILL
Trigger: GAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCACACAAAGCAGCCTaGCCCCTGAGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSHKAA*PLSSRG
Trigger: GCCCCTGGAGCTCAGGGGTCAGGCTGCTTTGTGTGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCCCCCAAACCTCCTTaGCCTGGCTTGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSPKPP*PGLGEA
Trigger: GGCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTAACCTTAAGCCTCAGTaGAAAAGGGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDINLKPQ*KREQRG
Trigger: TCCTCGCTGCTCCCTTTTGCACTGAGGCTTAAGGTT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCTGGTGGGTGTGGCTaGAGGCTCAGGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAGGCG*RLRGRR
Trigger: CCTCCTCCCCCTGAGCCTGCAGCCACACCCACCAGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCTCCGTTCCAGCTTCTaGCTCCAACGTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVLRSSF*LQRGGR
Trigger: CCGGCCACCACGTTGGAGGCAGAAGCTGGAACGGAG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTAGTATATTGCTCAGTTaGCCCAAGGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDISILLS*PKGWRR
Trigger: CCTTCTCCAGCCCTTGGGGCAACTGAGCAATATACT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCTAAATTTTGCGTGCTaGGGCACAGAACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHLNFAC*GTEPVA
Trigger: GGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGATTCTAAATTTTGCGTaGTGCGGCACAGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEILNFA*CGTEPV
Trigger: CACTGGTTCTGTGCCGCAGCACGCAAAATTTAGAAT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAGGACGGCGGGGGCATaGGACGGGTCCGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRTAGA*DGSVTS
Trigger: AGAGGTGACGGACCCGTCCCATGCCCCCGCCGTCCT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAGGCAGCTGTGGTGGTaGCAGGGTTGGGTGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRQLWW*QGWVRR
Trigger: GCGCCGCACCCAACCCTGCCACCACCACAGCTGCCT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTAATGACAGAGGGGGCTaGGTGGGCAAAAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFNDRGG*VGKSDD
Trigger: GTCATCACTTTTGCCCACCCAGCCCCCTCTGTCATT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTGGCCTCCTCCGTGGTaGTGGCCATGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPWPPPW*WPWLAL
Trigger: CAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCCCGCCCACTGGCTTaGCTGTGTAAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSRPLA*LCKSES
Trigger: GGACTCTGACTTACACAGCCAAGCCAGTGGGCGGGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTGGGAGCCCCCACCGTaGGCCTCTTGGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPWEPPP*ASWCFR
Trigger: GCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFEMIGS*SEAVSE
Trigger: TTCCGAGACCGCCTCACTCCAGGACCCTATCATTTC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGATATGGGGAGGAACATaGAAGATCCAAAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEIWGGT*KIQRHG
Trigger: TCCATGCCTTTGGATCTTCCATGTTCCTCCCCATAT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCGAAGTCCAGGAATATaGGGAGGAACATGGAAGATC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYRSPGI*GGTWKI
Trigger: GATCTTCCATGTTCCTCCCCATATTCCTGGACTTCG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTTCTCCATCCCATATaGAGTTCTTCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLLHPI*SSSLLA
Trigger: GGCCAGGAGGGAAGAACTCCATATGGGATGGAGAAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCATTTTTCTGGCTATTTaGTCTAGTCTGGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTIFLAI*SSLGET
Trigger: GGTTTCTCCCAGACTAGACCAAATAGCCAGAAAAAT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTATTTTTCTGGCTATTTaGTCTAGTCTGGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSIFLAI*SSLGET
Trigger: GGTTTCTCCCAGACTAGACCAAATAGCCAGAAAAAT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGTCATGTGCAAATCCTaGGCTTACCCACCCATCCGA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFVMCKS*AYPPIR
Trigger: TCGGATGGGTGGGTAAGCCCAGGATTTGCACATGAC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGAACTGAGTCAAAGATaGGGTGTAAGGTGCTATTTT +
Preference number: 4 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSELSQR*GVRCYF
Trigger: AAAATAGCACCTTACACCCCATCTTTGACTCAGTTC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTTTGCTCCCCCATACTaGCTCTCCCCTTGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHFAPPY*LSPCEL
Trigger: TAGCTCACAAGGGGAGAGCCAGTATGGGGGAGCAAA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCAGGTTATAGTAAGTaGCAAAGGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESGYSK*QRSPNR
Trigger: TCTGTTGGGAGACCTTTGTCACTTACTATAACCTGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGAAATACAGGGACCCTaGCCAGGGTTAACTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFEIQGP*PGLTSA
Trigger: TGCACTAGTTAACCCTGGTCAGGGTCCCTGTATTTC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCAGCGAGTCCCTTCTaGTGGGCCTCTTCCTTCGAT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSASPF*WASSFD
Trigger: ATCGAAGGAAGAGGCCCAGCAGAAGGGACTCGCTGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCGGGCTGGCTGGCATTaGCACAGGGGCCGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRAGWH*HRGRCV
Trigger: AACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAAQGS*GLAHLG
Trigger: GCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTAGTATATTGCTCAGTTaGCCCAAGGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSILLS*PKGWRR
Trigger: CCTTCTCCAGCCCTTGGGGCAACTGAGCAATATACT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCTTGTAGCCTCCATTaGGTGTCTTCTCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFACSLH*VSSHWQ
Trigger: TTGCCAGTGAGAAGACACCCAATGGAGGCTACAAGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCTTGGCTGCCCGCATaGGGAGCAGGCGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAWLPA*GAGGRA
Trigger: AGCTCTACCGCCTGCTCCCCATGCGGGCAGCCAAGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCACCTGCCTCACCGCTaGATGAGGAGACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGHLPHR*MRRLAS
Trigger: AGATGCAAGTCTCCTCATCCAGCGGTGAGGCAGGTG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCCCACATCGCCCTTCTaGGTTCTCTCAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVPTSPF*VLSTPA
Trigger: GGCAGGGGTTGAGAGAACCCAGAAGGGCGATGTGGG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGAAGATCCAAAGGCATaGAAGCTGAGGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIEDPKA*KLRKVS
Trigger: AGACACCTTCCTCAGCTTCCATGCCTTTGGATCTTC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCCCCTATCATTTTTCTaGCTATTTGGTCTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEPLSFF*LFGLVW
Trigger: CCAGACTAGACCAAATAGCCAGAAAAATGATAGGGG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYTRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCTGAAGAAGGGACTTaGAGCAGCCAGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSEEGT*SSQDAA
Trigger: CGCAGCGTCCTGGCTGCTTCAAGTCCCTTCTTCAGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTGTAAGGTGCTATTTTaGAGGGAAAGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDICKVLF*RESWWG
Trigger: TCCCCACCAACTTTCCCTTCAAAATAGCACCTTACA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAATTTTGACCTATTCTaGAGTTCCAATTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGENFDLF*SSNSPV
Trigger: GACCGGAGAATTGGAACTTCAGAATAGGTCAAAATT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGERWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCAACAGAAGATGCACTaGTACCTGCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVQQKMH*YLRSPV
Trigger: CACGGGGGAGCGCAGGTACCAGTGCATCTTCTGTTG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGGTATTCTCGTTTCTTaGGTGGCCTCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVGILVS*VASGEQ
Trigger: CTGCTCCCCCGAGGCCACCCAAGAAACGAGAATACC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGAGACTTGCATCTCTTaGGGGGCTTCCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGETCIS*GASSLT
Trigger: TGTCAAGGAGGAAGCCCCCCAAGAGATGCAAGTCTC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTTACCTCTTTTGCCTTaGAAGAATCTGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYLPLLP*KNLELT
Trigger: AGTGAGCTCCAGATTCTTCCAAGGCAAAAGAGGTAA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTATTTGGTCTAGTCTaGGAGAAACCATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELFGLV*EKPSGK
Trigger: TTTTCCTGATGGTTTCTCCCAGACTAGACCAAATAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTACCAGAAGAGTAGAATaGTTCCCCCAAAACCATCTG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDITRRVE*FPQNHL
Trigger: CAGATGGTTTTGGGGGAACCATTCTACTCTTCTGGT...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTGCCTCAGAGGAGTATaGGTTAAGGATATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFCLRGV*VKDIGA
Trigger: TGCCCCTATATCCTTAACCCATACTCCTCTGAGGCA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGTTCATTTGTCTTGTTaGTTTATTGGCCTACAGAGT +
Preference number: 4 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSVHLSC*FIGLQS
Trigger: ACTCTGTAGGCCAATAAACCAACAAGACAAATGAAC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR TCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTCAGGTTATAGTAAGTaGCAAAGGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDISGYSK*QRSPNR
Trigger: TCTGTTGGGAGACCTTTGTCACTTACTATAACCTGA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGATAGGGTCCTGGAGTaGGGCGGTCTCGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPDRVLE*GGLGSF
Trigger: GAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGGGCTCCTCACCCCCTaGAATGATAGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPGLLTP*NDRVLE
Trigger: CTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGAAATACAGGGACCCTaGCCAGGGTTAACTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGEIQGP*PGLTSA
Trigger: TGCACTAGTTAACCCTGGTCAGGGTCCCTGTATTTC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATAATTTTGACCTATTCTaGAGTTCCAATTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYNFDLF*SSNSPV
Trigger: GACCGGAGAATTGGAACTTCAGAATAGGTCAAAATT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGATGGAAGCTGGCCCTaGCCCTCATGGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPDGSWP*PSWRPF
Trigger: GAATGGCCTCCATGAGGGGCAGGGCCAGCTTCCATC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYRWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTATTCTAAATTTTGCGTaGTGCGGCACAGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFILNFA*CGTEPV
Trigger: CACTGGTTCTGTGCCGCAGCACGCAAAATTTAGAAT...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTGTGTCTCTTCAGACTaGACAGGGTCACGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGCVSSD*TGSRRN
Trigger: GTTCCTACGTGACCCTGTCCAGTCTGAAGAGACACA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCGGTGTGTTGAGGGTTaGAGAAAGGGGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPRCVEG*RKGSLR
Trigger: CCGGAGGCTCCCCTTTCTCCAACCCTCAACACACCG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAAATTCCTGCACAGGTaGGTATACATAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGKFLHR*VYIAAP
Trigger: GGGGGCAGCTATGTATACCCACCTGTGCAGGAATTT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGGGGTTCAGGGAGGGTaGCATCTGGTGAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPGVQGG*HLVKGG
Trigger: TCCCCCTTTCACCAGATGCCACCCTCCCTGAACCCC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAGCCACACTCCCAGGTaGGCGGGGTCAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSHTPR*AGSGIT
Trigger: TGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATATTTTTCTGGCTATTTaGTCTAGTCTGGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYIFLAI*SSLGET
Trigger: GGTTTCTCCCAGACTAGACCAAATAGCCAGAAAAAT...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCCCCTATCATTTTTCTaGCTATTTGGTCTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIPLSFF*LFGLVW
Trigger: CCAGACTAGACCAAATAGCCAGAAAAATGATAGGGG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCCTCAGTCTCTCTTGTaGTTCCGCTGTATAGATAGA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFPQSLL*FRCIDR
Trigger: TCTATCTATACAGCGGAACCACAAGAGAGACTGAGG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTCTGAAGAAGGGACTTaGAGCAGCCAGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSEEGT*SSQDAA
Trigger: CGCAGCGTCCTGGCTGCTTCAAGTCCCTTCTTCAGA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCTCCCCACCAGCCTTTaGTTCCTCCTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPLPTSL*FLLILL
Trigger: GAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCCATTTGTCAAATTTaGTCCCCCATACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPICQI*SPILAL
Trigger: GAGAGCCAGTATGGGGGAGCAAATTTGACAAATGGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCACAATCTCATTTGTTaGCCAGAACCACCACATTCT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHHNLIC*PEPPHS
Trigger: AGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCTAAATTTTGCGTGCTaGGGCACAGAACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVLNFAC*GTEPVA
Trigger: GGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGAGACTTGCATCTCTTaGGGGGCTTCCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVETCIS*GASSLT
Trigger: TGTCAAGGAGGAAGCCCCCCAAGAGATGCAAGTCTC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTTCCCTGCCCTGGACTaGGAAAGTGCTCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPFPALD*ESAQPQ
Trigger: CTGTGGCTGAGCACTTTCCCAGTCCAGGGCAGGGAA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGATTTATCTCCCCCACTaGAAGGAAATACAGGGACCC +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGIYLPH*KEIQGP
Trigger: GGGTCCCTGTATTTCCTTCCAGTGGGGGAGATAAAT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGTCTTGTTGGTTTATTaGCCTACAGAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFVLLVY*PTELDT
Trigger: TGTGTCCAACTCTGTAGGCCAATAAACCAACAAGAC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCTCAGGGTAGAAAGTaGCTTTGGCAGCCCCTATCC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAQGRK*LWQPLS
Trigger: GGATAGGGGCTGCCAAAGTCACTTTCTACCCTGAGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGCCACGAGTGTACATTaGTGTGTCTCTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVATSVH*CVSSDW
Trigger: CCAGTCTGAAGAGACACAGCAATGTACACTCGTGGC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATAGATGGGGTGTAAGGTaGTATTTTGAAGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRWGVR*YFEGKV
Trigger: AACTTTCCCTTCAAAATAGCACCTTACACCCCATCT...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCATGGAGGCCATTCCCTaGAGGAAGACTGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPMEAIP*RKTERG
Trigger: TCCCCTCTCAGTCTTCCTCCAGGGAATGGCCTCCAT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGATATGGGGAGGAACATaGAAGATCCAAAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGIWGGT*KIQRHG
Trigger: TCCATGCCTTTGGATCTTCCATGTTCCTCCCCATAT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGGAGTGACTCCTCTGTaGTTAACATTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVGVTPL*LTFREP
Trigger: AGGCTCCCTGAATGTTAACCACAGAGGAGTCACTCC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTGCTTGAGGATTCACTaGGTAGCCAAAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPCLRIH*VAKDPW
Trigger: CCAGGGGTCTTTGGCTACGCAGTGAATCCTCAAGCA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCTAAATTTTGCGTGCTaGGGCACAGAACCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPLNFAC*GTEPVA
Trigger: GGCCACTGGTTCTGTGCCGCAGCACGCAAAATTTAG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCCCTTCCCAGGAGATaGGAAAACTACATCTCACAC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSLPRR*ENYISH
Trigger: GTGTGAGATGTAGTTTTCCCATCTCCTGGGAAGGGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCTGAGGAAGGTGTCTTaGTACAAGGGAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPLRKVS*YKGNRD
Trigger: GTCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR GCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCTGCTTACCTCTTTTaGCTTGGAAGAATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSAYLF*LGRIWS
Trigger: GCTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAAATTCCTGCACAGGTaGGTATACATAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPKFLHR*VYIAAP
Trigger: GGGGGCAGCTATGTATACCCACCTGTGCAGGAATTT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTATATGGGGAGGAACATaGAAGATCCAAAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: PQLKYIYFNLHVATISFVIWGGT*KIQRHG
Trigger: TCCATGCCTTTGGATCTTCCATGTTCCTCCCCATAT...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGAACTGAGTCAAAGATaGGGTGTAAGGTGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGELSQR*GVRCYF
Trigger: AAAATAGCACCTTACACCCCATCTTTGACTCAGTTC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCCCTTTTGTATATGCTaGGAGGGTATGAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPPFCIC*EGMRGR
Trigger: CCTACCCCTCATACCCTCCCAGCATATACAAAAGGG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR TCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCAAAGGCATGGAAGCTaGGGAAGGTGTCTTGATACA +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPQRHGS*GRCLDT
Trigger: TGTATCAAGACACCTTCCTCAGCTTCCATGCCTTTG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCTGGGATCTTTGGGTGTaGGGAACTGAGTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPWDLWV*GTESKM
Trigger: CATCTTTGACTCAGTTCCCCACACCCAAAGATCCCA...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CAA 72 bp ACATATATTTTAATCTCCACGTCGCCACAATCTCATTaGTTGCCCAGAACCACCACATTCTGGAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: TYILISTSPQSH*LPRTTTFWKLF
Trigger: AAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
3UTR CAA 72 bp AGTTCATTTGTCTTGTTGGTTTATTGGCCTACAGAGTaGGACACACACACAAATGCGGAGATAAATATTGGT +
Preference number: 4 (lower is better)
Translates to: SSFVLLVYWPTE*DTHTNAEINIG
Trigger: ACCAATATTTATCTCCGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATAAACCAACAAGACAAATGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCCCCTATCATTTTTCTaGCTATTTGGTCTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPPLSFF*LFGLVW
Trigger: CCAGACTAGACCAAATAGCCAGAAAAATGATAGGGG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CCA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGTCTTGTTGGTTTATTaGCCTACAGAGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPVLLVY*PTELDT
Trigger: TGTGTCCAACTCTGTAGGCCAATAAACCAACAAGAC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp TCTGACTGCGATGGCGCCGCGTCCGCCAGGCCCGGCTCATCACCGTaGCCGCCCCCGGCCGCTCCGGTTTTGCCCGCCTCCAGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SDCDGAASARPGSSP*PPPAAPVLPASSSG
Trigger: GCCGGAGCTGGAGGCGGGCAAAACCGGAGCGGCCGGGGGCGGCCACGGTGATGAGCCGGGCCTGGCGGACGCGGCGCCATCGCAGTCAGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS GCA 90 bp GCCGCGCACACATACAGCACGTGGCCGCCCACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAGCCCACTGGTGGAGGCAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AAHTYSTWPPTTFTT*SGPPRKPTGGGRAE
Trigger: CTCAGCCCTGCCTCCACCAGTGGGCTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGTGGGCGGCCACGTGCTGTATGTGTGCGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp ACAGTCCCCGCATCGGTGCCTCCGCTCTGTGCGGGCACGTCCCGCTaGGCTCTCGGCCGCTGGGGTTTCCTCCCAGCTCCTCCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TVPASVPPLCAGTSR*ALGRWGFLPAPPFQ
Trigger: CTGGAACGGAGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GGGCAGGTAAAGCGGGTGGAGGGCCTCCGTCCGGCCCGGGAGCTGTaGGAGCCCCCACCGTGGGCCTCTTGGTGCTTCCGCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GQVKRVEGLRPAREL*EPPPWASWCFRSFL
Trigger: GAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACGGAGGCCCTCCACCCGCTTTACCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GGGCCTGGTGCCAGCGCTGCCCTTGGAATAGGCAATGACAGGGGTTaGGGTGCCCCCGGGCCGCTCAGCAGCATGCCTCTGCCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: GPGASAALGIGNDRG*GAPGPLSSMPLPVA
Trigger: CGCCACGGGCAGAGGCATGCTGCTGAGCGGCCCGGGGGCACCCCAACCCCTGTCATTGCCTATTCCAAGGGCAGCGCTGGCACCAGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp ATTCCGGCCCTTGGCCTCCTCCGTGGTGGTGGCCATGGCTGGCCCTaGAGCGGTGGCTGGGCTGACTGCTGTGGCTGGGCTGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: IPALGLLRGGGHGWP*SGGWADCCGWAGGC
Trigger: ACACCCACCAGCCCAGCCACAGCAGTCAGCCCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGGGCCGGAAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp GGGCCGCTCAGCAGCATGCCTCTGCCCGTGGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGCGCAGTGGGGGCAGGTAAAGCGGGT +
Preference number: 5 (lower is better)
Translates to: GPLSSMPLPVAAQGS*GLAHLGAVGAGKAG
Trigger: ACCCGCTTTACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GTGGAGGGCCTCCGTCCGGCCCGGGAGCTGTGGGAGCCCCCACCGTaGGCCTCTTGGTGCTTCCGCAGCTTTCTCAGGGTGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VEGLRPARELWEPPP*ASWCFRSFLRVVKV
Trigger: GACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACGGAGGCCCTCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp AGCTTTCTCAGGGTGGTGAAGGTCTGGGCACAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCACGTCCCGCTGGGCTCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: SFLRVVKVWAQSPHR*LRSVRARPAGLSAA
Trigger: AGCGGCCGAGAGCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp CGTCCGGCCCGGGAGCTGTGGGAGCCCCCACCGTGGGCCTCTTGGTaGTTCCGCAGCTTTCTCAGGGTGGTGAAGGTCTGGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: RPARELWEPPPWASW*FRSFLRVVKVWAQS
Trigger: GGACTGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GGGCCCAAAGCTGTCCTCTTCAGGCTGCGAGGTGGCCATGGGGGCTaGGGTAGGAGGTACCCAGGCATCACCTCCCTCCCCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GPKAVLFRLRGGHGG*GRRYPGITSLPQAL
Trigger: CAGGGCCTGGGGGAGGGAGGTGATGCCTGGGTACCTCCTACCCCAGCCCCCATGGCCACCTCGCAGCCTGAAGAGGACAGCTTTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp CTCCGTCCGGCCCGGGAGCTGTGGGAGCCCCCACCGTGGGCCTCTTaGTGCTTCCGCAGCTTTCTCAGGGTGGTGAAGGTCTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: LRPARELWEPPPWAS*CFRSFLRVVKVWAQ
Trigger: CTGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp GGAGATGCCCAGACGGCGCCCCAAAGCTCCAATCTCTGCTACAGCTaGCCCGTCCCCTCCACCACCAGGCAGTGCGAGCCGGGCGCTGTA +
Preference number: 5 (lower is better)
Translates to: GDAQTAPQSSNLCYS*PVPSTTRQCEPGAV
Trigger: TACAGCGCCCGGCTCGCACTGCCTGGTGGTGGAGGGGACGGGGCAGCTGTAGCAGAGATTGGAGCTTTGGGGCGCCGTCTGGGCATCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 90 bp CCCCACCGTGGGCCTCTTGGTGCTTCCGCAGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCCCGCATCGGTGCCTCCGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: PHRGPLGASAAFSGW*RSGHSPRIGASALC
Trigger: GCACAGAGCGGAGGCACCGATGCGGGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp GTACCCAGGCATCACCTCCCTCCCCCAGGCCCTGAAGGCGGGAGATaGCCAGACGGCGCCCCAAAGCTCCAATCTCTGCTACAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VPRHHLPPPGPEGGR*PDGAPKLQSLLQLP
Trigger: GGGCAGCTGTAGCAGAGATTGGAGCTTTGGGGCGCCGTCTGGGCATCTCCCGCCTTCAGGGCCTGGGGGAGGGAGGTGATGCCTGGGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp TGGCTGTGTAAGTCAGAGTCCTTCCAGCCCGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGGCCATGGCTGGCCCTGCAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: WLCKSESFQPVDSGP*PPPWWWPWLALQRW
Trigger: CCACCGCTGCAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGGGCCGGAATCCACGGGCTGGAAGGACTCTGACTTACACAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACCGGCCGCTCCGGTTTaGCCCGCCTCCAGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTPAAPV*PASSSG
Trigger: GCCGGAGCTGGAGGCGGGCAAAACCGGAGCGGCCGG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CAA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCATAGCTGCCCCCGCTaGCCACTACTGGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGHSCPR*PLLGAP
Trigger: AGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTATG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGGCAGGGGGTGCTGCTaGAGGATTCACTGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHGRGCC*RIHCVA
Trigger: GGCTACGCAGTGAATCCTCAAGCAGCACCCCCTGCC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTGGTGAAAGGGGGATaGAGCCCCAGGGTTCACCCC +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLVKGG*SPRVHP
Trigger: GGGGTGAACCCTGGGGCTCAATCCCCCTTTCACCAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GCTCCCAGCCCTGTAGACCCCCGCGTGCTGGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGCCGTTTGGGATGGATGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: APSPVDPRVLAPRRH*ASWVCSRLGWMKLF
Trigger: AAAAAGCTTCATCCATCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGCCAGCACGCGGGGGTCTACAGGGCTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp AGCCTCCGGGGCTCCCTGGCTGTAGGTCTTGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCGGTAGAGCTTGAGTGTATTGAGCTT +
Preference number: 5 (lower is better)
Translates to: SLRGSLAVGLVGPLG*PHGEQAVELECIEL
Trigger: AAGCTCAATACACTCAAGCTCTACCGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTACAAGACCTACAGCCAGGGAGCCCCGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGCGGGCTGGCTGGCATaGCCACAGGGGCCGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAAAGWLA*PQGPVC
Trigger: ACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCGC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAGGGCAGCTGCGGTCTaGCACACCTTGGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGRAAAV*HTLAQW
Trigger: CCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCT...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGAGGGCAGCTGCGGTCTaGCACACCTTGGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRRAAAV*HTLAQW
Trigger: CCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCT...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCATAGCTGCCCCCGCTaGCCACTACTGGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGHSCPR*PLLGAP
Trigger: AGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTATG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 90 bp CTCCATCTCCTCTCCGCTCAGCTCCCCAGGACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGATGGCCTCCTCCCCTATTCGCACAGT +
Preference number: 5 (lower is better)
Translates to: LHLLSAQLPRTQVSL*DAALDDGLLPYSHS
Trigger: ACTGTGCGAATAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGTCCTGGGGAGCTGAGCGGAGAGGAGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp CTTGCCACTACTGGGGGCTCCTCACCCCCTGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAAGCTTCCTCAGCAGCAGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LATTGGSSPPEMIGS*SEAVSEASSAAVLP
Trigger: CGGGAGCACTGCTGCTGAGGAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCCCCAGTAGTGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGCGGGCTGGCTGGCATaGCCACAGGGGCCGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGAGWLA*PQGPVC
Trigger: ACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCGC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGTCTGAGATGCGGCGCTaGACGATGGCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGSEMRR*TMASSP
Trigger: AGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGA...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGCTAGGGCAGCCATCTaGGCCCCAAAAACAGTAGCT +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHARAAI*APKTVA
Trigger: AGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGCGGAGCCGCTGTTCATaGAGCTGGCGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGRSRCS*SWRRTA
Trigger: CGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCCG...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCGGAGCCGCTGTTCATaGAGCTGGCGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTRSRCS*SWRRTA
Trigger: CGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCCG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCGCCACGAGTGTACATaGCTGTGTCTCTTCAGACTG +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHRHECT*LCLFRL
Trigger: CAGTCTGAAGAGACACAGCAATGTACACTCGTGGCG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGCGGGCTGGCTGGCATaGCCACAGGGGCCGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSAGWLA*PQGPVC
Trigger: ACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCGC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCAGGGCAGCTGCGGTCTaGCACACCTTGGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAARAAAV*HTLAQW
Trigger: CCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCT...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATCCGGCCGCTCCGGTTTaGCCCGCCTCCAGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYPAAPV*PASSSG
Trigger: GCCGGAGCTGGAGGCGGGCAAAACCGGAGCGGCCGG...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380599.9
ENST00000639670.2
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGGGTATTCTCGTTTCTaGGGTGGCCTCGGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTGYSRF*GGLGGA
Trigger: TGCTCCCCCGAGGCCACCCAAGAAACGAGAATACCC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCCCACCGTGGGCCTCTaGGTGCTTCCGCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAAPTVGL*VLPQLS
Trigger: AGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTCATAGCTGCCCCCGCTaGCCACTACTGGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSHSCPR*PLLGAP
Trigger: AGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTATG...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCGGCAGGGGGTGCTGCTaGAGGATTCACTGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAAGRGCC*RIHCVA
Trigger: GGCTACGCAGTGAATCCTCAAGCAGCACCCCCTGCC...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 90 bp TGCACTGGTACCTGCGCTCCCCCGTGTGCCACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAAACACTTTCTCACAATAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: CTGTCAPPCATLHAS*GTPPEQTLSHNSGR
Trigger: CCTGCCGCTATTGTGAGAAAGTGTTTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAGGTACCAGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCCACCGTGGGCCTCTaGGTGCTTCCGCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPTVGL*VLPQLS
Trigger: AGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCAGGTAGGACCATGTaGAGAGCAACCGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTSGRTM*RATGRA
Trigger: CGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTCCCCCAAACCTCCTaGACCTGGCTTGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLPQTS*TWLGRG
Trigger: GCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCTTCCTCAGTCTCTCTaGTGGTTCCGCTGTATAGAT +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHLPQSL*WFRCID
Trigger: ATCTATACAGCGGAACCACAAGAGAGACTGAGGAAG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTTTTCCCATGCCTGTTaGCCTCAGAGGAGTATGGGT +
Preference number: 5 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGFSHAC*PQRSMG
Trigger: ACCCATACTCCTCTGAGGCAAACAGGCATGGGAAAA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 90 bp GGTACTTCCTCCGCCACGAGTGTACATTGCTGTGTCTCTTCAGACTaGACAGGGTCACGTAGGAACGCTCGCAGGCCGCGCACACATACA +
Preference number: 5 (lower is better)
Translates to: GTSSATSVHCCVSSD*TGSRRNARRPRTHT
Trigger: TGTATGTGTGCGCGGCCTGCGAGCGTTCCTACGTGACCCTGTCCAGTCTGAAGAGACACAGCAATGTACACTCGTGGCGGAGGAAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGGGTATTCTCGTTTCTaGGGTGGCCTCGGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTGYSRF*GGLGGA
Trigger: TGCTCCCCCGAGGCCACCCAAGAAACGAGAATACCC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCCCACCGTGGGCCTCTaGGTGCTTCCGCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSPTVGL*VLPQLS
Trigger: AGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGCGGTCTTGCACACCTaGGCGCAGTGGGGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEAVLHT*AQWGQV
Trigger: TACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTTCAGGTTAAGTATATaGCTCAGTTGCCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGFRLSI*LSCPKG
Trigger: GCCCTTGGGGCAACTGAGCAATATACTTAACCTGAA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTTCAGGTTAAGTATATaGCTCAGTTGCCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGFRLSI*LSCPKG
Trigger: GCCCTTGGGGCAACTGAGCAATATACTTAACCTGAA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCTCCCCCAAACCTCCTaGACCTGGCTTGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSLPQTS*TWLGRG
Trigger: GCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGTCCCATTTGTCAAATTaGCTCCCCCATACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGSHLSN*LPHTGS
Trigger: AGAGCCAGTATGGGGGAGCAAATTTGACAAATGGGA...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACACGCCACGAGTGTACATaGCTGTGTCTCTTCAGACTG +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTRHECT*LCLFRL
Trigger: CAGTCTGAAGAGACACAGCAATGTACACTCGTGGCG...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGCGGGCTGGCTGGCATaGCCACAGGGGCCGGTGTGT +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHAGWLA*PQGPVC
Trigger: ACACACCGGCCCCTGTGGCAATGCCAGCCAGCCCGC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGATAACCGAGGCAGCTaGGGACCCTCCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEDNRGS*GPSCAG
Trigger: GCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTATC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCGGGTATTCTCGTTTCTaGGGTGGCCTCGGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSGYSRF*GGLGGA
Trigger: TGCTCCCCCGAGGCCACCCAAGAAACGAGAATACCC...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCTGAGATGCGGCGCTaGACGATGGCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESEMRR*TMASSP
Trigger: AGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTCCCCACCAGCCTTaGATTCCTCCTCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTPPHQP*IPPHPP
Trigger: AGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAGG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTCAGGTAGGACCATGTaGAGAGCAACCGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGSGRTM*RATGRA
Trigger: CGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTGA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCTGGTGAAAGGGGGATaGAGCCCCAGGGTTCACCCC +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGELVKGG*SPRVHP
Trigger: GGGGTGAACCCTGGGGCTCAATCCCCCTTTCACCAG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLPGGRGQVSQWSGPGPGICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...CCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AGAACCAGTGGCCTTCTCACTCTGCCACCACCCGTCTTCCCAGGGAACATGGGGCCAAAAGCCATGATCTaGCCCTTGGCAGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: RTSGLLTLPPPVFPGNMGPKAMI*PLAVIA
Trigger: AGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGG...CCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGAGTGAGAAGGCCACTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGTTTTCCCATGCCTGTTaGCCTCAGAGGAGTATGGGT +
Preference number: 5 (lower is better)
Translates to: QSHTPRWAGSGITMVWSRFSHAC*PQRSMG
Trigger: ACCCATACTCCTCTGAGGCAAACAGGCATGGGAAAA...CCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATCGGAGCCGCTGTTCATaGAGCTGGCGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHRSRCS*SWRRTA
Trigger: CGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCCG...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCGGAGCCGCTGTTCATaGAGCTGGCGCAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFRSRCS*SWRRTA
Trigger: CGCCGTCCTGCGCCAGCTCAATGAACAGCGGCTCCG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGCGGTCTTGCACACCTaGGCGCAGTGGGGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIAVLHT*AQWGQV
Trigger: TACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGCTAGGGCAGCCATCTaGGCCCCAAAAACAGTAGCT +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTARAAI*APKTVA
Trigger: AGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTGGTCCAGGCCCTGGGCCACCACAGTTCATTTGTCTaGTTGGTTTATTGGCCTACA +
Preference number: 5 (lower is better)
Translates to: SQVGGVRYHNGLVQALGHHSSFV*LVYWPT
Trigger: TGTAGGCCAATAAACCAACAAGACAAATGAACTGTG...GTGGCCCAGGGCCTGGACCAGACCATTGTGATACCTGACCCCGCCCACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTTGGAGCACAGTTCATTaGTCTTGTTGGTTTATTGGC +
Preference number: 5 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGWSTVH*SCWFIG
Trigger: GCCAATAAACCAACAAGACAAATGAACTGTGCTCCA...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATGGGTATTCTCGTTTCTaGGGTGGCCTCGGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYGYSRF*GGLGGA
Trigger: TGCTCCCCCGAGGCCACCCAAGAAACGAGAATACCC...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCCTCCCCACCAGCCTTaGATTCCTCCTCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEPPHQP*IPPHPP
Trigger: AGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAGG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCGGTCTTGCACACCTaGGCGCAGTGGGGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFAVLHT*AQWGQV
Trigger: TACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTGGCAGGGGGTGCTGCTaGAGGATTCACTGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIGRGCC*RIHCVA
Trigger: GGCTACGCAGTGAATCCTCAAGCAGCACCCCCTGCC...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCCAAAAGCCATGATCTaGCCCTTGGCAGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAAPKAMI*PLAVIA
Trigger: AGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GACCCACGCTGGGGAAGGATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCACAGTTCATTTGTCTaGTTGGTTTATTGGCCTACA +
Preference number: 5 (lower is better)
Translates to: DPRWGRMKPKATLPGGRGHSSFV*LVYWPT
Trigger: TGTAGGCCAATAAACCAACAAGACAAATGAACTGTG...ACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCATCCTTCCCCAGCGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATGATAACCGAGGCAGCTaGGGACCCTCCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHDNRGS*GPSCAG
Trigger: GCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTATC...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCTGAGATGCGGCGCTaGACGATGGCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSEMRR*TMASSP
Trigger: AGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCTGGTGAAAGGGGGATaGAGCCCCAGGGTTCACCCC +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFLVKGG*SPRVHP
Trigger: GGGGTGAACCCTGGGGCTCAATCCCCCTTTCACCAG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCAAGTATATTGCTCAGTaGCCCCAAGGGCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTKYIAQ*PQGLEK
Trigger: CTTCTCCAGCCCTTGGGGCAACTGAGCAATATACTT...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCGCTGAGGAAGGTGTCTaGATACAAGGGAAACAGGGA +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTAEEGV*IQGKQG
Trigger: TCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAGC...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGAGGGCAGCTGCGGTCTaGCACACCTTGGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGRAAAV*HTLAQW
Trigger: CCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCT...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCATAGCTGCCCCCGCTaGCCACTACTGGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGHSCPR*PLLGAP
Trigger: AGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTATG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTCAGGTAGGACCATGTaGAGAGCAACCGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDISGRTM*RATGRA
Trigger: CGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTGA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACATCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTSSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCTGCCACCACCCGTCTTCCCAGGGAACATGGGGAAAGAGGGCACGAACTGACAGAAAAGGCTGCCATTTaGATGACAGCAACTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SATTRLPREHGERGHELTEKAAI*MTATFP
Trigger: AGGAAAAGTTGCTGTCATCAAAATGGCAGCCTTTTC...TGTCAGTTCGTGCCCTCTTTCCCCATGTTCCCTGGGAAGACGGGTGGTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAALKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CAGGTAAGGATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCTTCCTCAGTCTCTCTaGTGGTTCCGCTGTATAGAT +
Preference number: 5 (lower is better)
Translates to: QVRMEGHVQILGLPTHPTLPQSL*WFRCID
Trigger: ATCTATACAGCGGAACCACAAGAGAGACTGAGGAAG...GGTCGGATGGGTGGGTAAGCCCAGGATTTGCACATGACCTTCCATCCTTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCTCGCCACAATCTCATTaGTTGCCCAGAACCACCACA +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSSPQSH*LPRTTT
Trigger: TGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGA...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGGATAACCGAGGCAGCTaGGGACCCTCCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGDNRGS*GPSCAG
Trigger: GCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTATC...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCAGGTAGGACCATGTaGAGAGCAACCGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSGRTM*RATGRA
Trigger: CGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 5 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGCCAAAAGCCATGATCTaGCCCTTGGCAGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEPKAMI*PLAVIA
Trigger: AGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGG...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCGCCACAATCTCATTaGTTGCCCAGAACCACCACA +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESPQSH*LPRTTT
Trigger: TGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGCAGTGATTGCTGCTAGGGCAGCCATCTTGGCCCCAAAAACAGTAGCTGGGTGTCTTGTTGGTTTATaGGCCTACAGAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: LAVIAARAAILAPKTVAGCLVGL*AYRVGH
Trigger: GTGTCCAACTCTGTAGGCCAATAAACCAACAAGACA...CCCAGCTACTGTTTTTGGGGCCAAGATGGCTGCCCTAGCAGCAATCACTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TTGGGAGAGGCCATCTCCGAAGTCCAGGAATATGGGGAGGAACATGGAAGATCCCTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: LGEAISEVQEYGEEHGRSLKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...GGATCTTCCATGTTCCTCCCCATATTCCTGGACTTCGGAGATGGCCTCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTATTGGCCTACAGAGTaGGACACACACACAAATGCG +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEYWPTE*DTHTNA
Trigger: CGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTTGGAGCACAGTTCATTaGTCTTGTTGGTTTATTGGC +
Preference number: 5 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSWSTVH*SCWFIG
Trigger: GCCAATAAACCAACAAGACAAATGAACTGTGCTCCA...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCTGAGATGCGGCGCTaGACGATGGCCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSEMRR*TMASSP
Trigger: AGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCCTCCCCACCAGCCTTaGATTCCTCCTCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGPPHQP*IPPHPP
Trigger: AGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAGG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTGGCAGGGGGTGCTGCTaGAGGATTCACTGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVGRGCC*RIHCVA
Trigger: GGCTACGCAGTGAATCCTCAAGCAGCACCCCCTGCC...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCTCCCCCAAACCTCCTaGACCTGGCTTGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVLPQTS*TWLGRG
Trigger: GCCTCTCCCAAGCCAGGTCAAGGAGGTTTGGGGGAG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTCCCATTTGTCAAATTaGCTCCCCCATACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYSHLSN*LPHTGS
Trigger: AGAGCCAGTATGGGGGAGCAAATTTGACAAATGGGA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCCAAAAGCCATGATCTaGCCCTTGGCAGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIPKAMI*PLAVIA
Trigger: AGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CTCCCTCCAAAAGCCATGATCTTGCCCTTGGCAGTGATTGCTGCTAGGGCAGCCCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LPPKAMILPLAVIAARAAHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...GGCTGCCCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGCTTTTGGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTGTCTTGTTGGTTTATaGGCCTACAGAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGECLVGL*AYRVGH
Trigger: GTGTCCAACTCTGTAGGCCAATAAACCAACAAGACA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp ATGAAACCCAAAGCCACACTCCCAGGTGGGCGGGGTCAGGTATCACAATGGTCTAGTTCATTTGTCTTGTaGGTTTATTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: MKPKATLPGGRGQVSQWSSSFVL*VYWPTE
Trigger: CTCTGTAGGCCAATAAACCAACAAGACAAATGAACT...AGACCATTGTGATACCTGACCCCGCCCACCTGGGAGTGTGGCTTTGGGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCGGTCTTGCACACCTaGGCGCAGTGGGGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAVLHT*AQWGQV
Trigger: TACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTGCTGAGGAAGGTGTCTaGATACAAGGGAAACAGGGA +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFAEEGV*IQGKQG
Trigger: TCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAGC...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTGGAGCTCACTGGATTaGGGGGTCAAGATAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGWSSLD*GVKIGP
Trigger: TGGCCCTATCTTGACCCCCAAATCCAGTGAGCTCCA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGTCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGESSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GCAACTGGGAAGGGCTTAGAGAAAGCTTCAGAACAAGGCGGGTCATTAGGTGAGGAAAAGGCTGCCATTTaGATGACAGCAACTTTTCCT +
Preference number: 5 (lower is better)
Translates to: ATGKGLEKASEQGGSLGEEKAAI*MTATFP
Trigger: AGGAAAAGTTGCTGTCATCAAAATGGCAGCCTTTTC...CTCACCTAATGACCCGCCTTGTTCTGAAGCTTTCTCTAAGCCCTTCCCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTCTTCCTCAGTCTCTCTaGTGGTTCCGCTGTATAGAT +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDILPQSL*WFRCID
Trigger: ATCTATACAGCGGAACCACAAGAGAGACTGAGGAAG...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTTTTCCCATGCCTGTTaGCCTCAGAGGAGTATGGGT +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHFSHAC*PQRSMG
Trigger: ACCCATACTCCTCTGAGGCAAACAGGCATGGGAAAA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTCGCCACAATCTCATTaGTTGCCCAGAACCACCACA +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHSPQSH*LPRTTT
Trigger: TGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp GTGAGAGAGATGGTTTCCCCTAGGTTTACGAATCAGGGGAGCAGGTTAGACATTTATTGGCCTACAGAGTaGGACACACACACAAATGCG +
Preference number: 5 (lower is better)
Translates to: VREMVSPRFTNQGSRLDIYWPTE*DTHTNA
Trigger: CGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATA...AATGTCTAACCTGCTCCCCTGATTCGTAAACCTAGGGGAAACCATCTCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTATCATTTTTCTGGCTATTGTCTTGTTGGTTTATaGGCCTACAGAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: CANPGLTHPSDPYHFSGYCLVGL*AYRVGH
Trigger: GTGTCCAACTCTGTAGGCCAATAAACCAACAAGACA...ATAGCCAGAAAAATGATAGGGGTCGGATGGGTGGGTAAGCCCAGGATTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCGCCACGAGTGTACATaGCTGTGTCTCTTCAGACTG +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGRHECT*LCLFRL
Trigger: CAGTCTGAAGAGACACAGCAATGTACACTCGTGGCG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGATAACCGAGGCAGCTaGGGACCCTCCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPDNRGS*GPSCAG
Trigger: GCCAGCACAGGAGGGTCCCAAGCTGCCTCGGTTATC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTTCAGGTTAAGTATATaGCTCAGTTGCCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHFRLSI*LSCPKG
Trigger: GCCCTTGGGGCAACTGAGCAATATACTTAACCTGAA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTCCCATTTGTCAAATTaGCTCCCCCATACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFSHLSN*LPHTGS
Trigger: AGAGCCAGTATGGGGGAGCAAATTTGACAAATGGGA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCTATTCTGAAGTTCCAATTCTCCGGTCCATCCTCAACCCTTCCATTTTCCCATTATTGGCCTACAGAGTaGGACACACACACAAATGCG +
Preference number: 5 (lower is better)
Translates to: PILKFQFSGPSSTLPFSHYWPTE*DTHTNA
Trigger: CGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATA...ATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGAATTGGAACTTCAGAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTTATTGGCCTACAGAGTaGGACACACACACAAATGCG +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFYWPTE*DTHTNA
Trigger: CGCATTTGTGTGTGTGTCCAACTCTGTAGGCCAATA...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTGGGTCTGCAGCCGTTaGGGATGGATGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGWVCSR*GWMKLF
Trigger: AAAAAGCTTCATCCATCCCAAACGGCTGCAGACCCA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCGCCACGAGTGTACATaGCTGTGTCTCTTCAGACTG +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVRHECT*LCLFRL
Trigger: CAGTCTGAAGAGACACAGCAATGTACACTCGTGGCG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCCCATTTGTCAAATTaGCTCCCCCATACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSHLSN*LPHTGS
Trigger: AGAGCCAGTATGGGGGAGCAAATTTGACAAATGGGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 90 bp AATGAGAGGCTTTTGCTGAAGATGAAACCGTTGTCCAAACTAGAATaGAAGCGGCCCAATTTTACCCTCGAGTCTTCAAACCTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: NERLLLKMKPLSKLE*KRPNFTLESSNLKP
Trigger: AGGCTTAAGGTTTGAAGACTCGAGGGTAAAATTGGGCCGCTTTCATTCTAGTTTGGACAACGGTTTCATCTTCAGCAAAAGCCTCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCCATGATCTTGCCCTaGGCAGTGATTGCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAMILP*AVIAAR
Trigger: CCTAGCAGCAATCACTGCCAAGGGCAAGATCATGGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTTTTCCCATGCCTGTTaGCCTCAGAGGAGTATGGGT +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVFSHAC*PQRSMG
Trigger: ACCCATACTCCTCTGAGGCAAACAGGCATGGGAAAA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGTCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGSSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CGTCGCCACAATCTCATTTGTTGCCCAGAACCACCACATTCTGGAAGCTATTTTCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RRHNLICCPEPPHSGSYFHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...AAAATAGCTTCCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCGCTGAGGAAGGTGTCTaGATACAAGGGAAACAGGGA +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPAEEGV*IQGKQG
Trigger: TCCCTGTTTCCCTTGTATCAAGACACCTTCCTCAGC...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTATCTGCTTACCTCTTTaGCCTTGGAAGAATCTGGAG +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVICLPL*PWKNLE
Trigger: CTCCAGATTCTTCCAAGGCAAAAGAGGTAAGCAGAT...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTCTAAAACCTCCCCTTTaGTATATGCTGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVLKPPL*YMLGGY
Trigger: ATACCCTCCCAGCATATACAAAAGGGGAGGTTTTAG...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp CCCCAGCTCAAATACATATATTTTAATCTCCACGTCGCCACAATCTCATTTGTTTCCTCTAATTCCCATTaGTCAAATTTGCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: PQLKYIYFNLHVATISFVSSNSH*SNLLPH
Trigger: ATGGGGGAGCAAATTTGACAAATGGGAATTAGAGGA...AACAAATGAGATTGTGGCGACGTGGAGATTAAAATATATGTATTTGAGCTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp TCAAAGAGAATTAGGAGCAAACATTTATCTCCCCCACTGGAAGGAAATACAGGGCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SKRIRSKHLSPPLEGNTGHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...CCCTGTATTTCCTTCCAGTGGGGGAGATAAATGTTTGCTCCTAATTCTCTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCAGTTCATTTGTCTTGTaGGTTTATTGGCCTACAGAG +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPSSFVL*VYWPTE
Trigger: CTCTGTAGGCCAATAAACCAACAAGACAAATGAACT...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1
CDS-3UTR CAA 90 bp AACTGCAAAATCCCAAATTTCCAACATCTGAAACTCACAATATTCAAATTCCCCCATGGTTTTGGAATTTaGACCTATTCTGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: NCKIPNFQHLKLTIFKFPHGFGI*TYSEVP
Trigger: TGGAACTTCAGAATAGGTCAAAATTCCAAAACCATG...GGGGAATTTGAATATTGTGAGTTTCAGATGTTGGAAATTTGGGATTTTGCAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp TCTGGGCACAGTCCCCGCATCGGTGCCTCCGCTCTGTaGGGGCACGTCCCGCTGGGCTCTCGGCCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SGHSPRIGASAL*GHVPLGSRPLG
Trigger: CCCCAGCGGCCGAGAGCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTGTGCCCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp AAGCGGGTGGAGGGCCTCCGTCCGGCCCGGGAGCTGTaGGAGCCCCCACCGTGGGCCTCTTGGTGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: KRVEGLRPAREL*EPPPWASWCFR
Trigger: GCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACGGAGGCCCTCCACCCGCTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp TCCAACGTGGTGGCCGGCGGCCTCGGGGCAGCCCACTaGCCCCCACACTGGCACCTCCAGCAGCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SNVVAGGLGAAH*PPHWHLQQLQP
Trigger: AGGCTGGAGCTGCTGGAGGTGCCAGTGTGGGGGGCAGTGGGCTGCCCCGAGGCCGCCGGCCACCACGTTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp GTTGGGGTGCCCCCGGGCCGCTCAGCAGCATGCCTCTaGCCGTGGCGGCTCAGGGCAGCTGCGGTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: VGVPPGRSAACL*PWRLRAAAVLH
Trigger: GTGCAAGACCGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCCCGGGGGCACCCCAAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CAGCCCGTGGATTCCGGCCCTTGGCCTCCTCCGTGGTaGTGGCCATGGCTGGCCCTGCAGCGGTGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: QPVDSGPWPPPW*WPWLALQRWLG
Trigger: GCCCAGCCACCGCTGCAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGGGCCGGAATCCACGGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CTCCCAGCTCCTCCGTTCCAGCTTCTGCCTCCAACGTaGTGGCCGGCGGCCTCGGGGCAGCCCACTGCCCCC +
Preference number: 6 (lower is better)
Translates to: LPAPPFQLLPPT*WPAASGQPTAP
Trigger: GGGGGCAGTGGGCTGCCCCGAGGCCGCCGGCCACCACGTTGGAGGCAGAAGCTGGAACGGAGGAGCTGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GCATCGGTGCCTCCGCTCTGTGCGGGCACGTCCCGCTaGGCTCTCGGCCGCTGGGGTTTCCTCCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: ASVPPLCAGTSR*ALGRWGFLPAP
Trigger: AGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACCGATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GTGCCCCCGGGCCGCTCAGCAGCATGCCTCTGCCCGTaGCGGCTCAGGGCAGCTGCGGTCTTGCACACCTTG +
Preference number: 6 (lower is better)
Translates to: VPPGRSAACLCP*RLRAAAVLHTL
Trigger: CAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCTGAGCGGCCCGGGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp AGGGTGGTGAAGGTCTGGGCACAGTCCCCGCATCGGTaGCTCCGCTCTGTGCGGGCACGTCCCGCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: RVVKVWAQSPHR*LRSVRARPAGL
Trigger: GAGCCCAGCGGGACGTGCCCGCACAGAGCGGAGGCACCGATGCGGGGACTGTGCCCAGACCTTCACCACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 90 bp CCTCCGTCCGGCCCGGGAGCTGTGGGAGCCCCCACCGTGGGCCTCTaGGTGCTTCCGCAGCTTTCTCAGGGTGGTGAAGGTCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: PPSGPGAVGAPTVGL*VLPQLSQGGEGLGT
Trigger: TGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGCCGGACGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp ACATACAGCACGTGGCCGCCCACCACCTTCACCACGTaGTCGGGGCCCCCTCGGAAGCCCACTGGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TYSTWPPTTFTT*SGPPRKPTGGG
Trigger: GCCTCCACCAGTGGGCTTCCGAGGGGGCCCCGAGCACGTGGTGAAGGTGGTGGGCGGCCACGTGCTGTATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp AGCAGCATGCCTCTGCCCGTGGCGGCTCAGGGCAGCTaGGGTCTTGCACACCTTGGCGCAGTGGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: SSMPLPVAAQGS*GLAHLGAVGAG
Trigger: ACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCATGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CTCTGTGCGGGCACGTCCCGCTGGGCTCTCGGCCGCTaGGGTTTCCTCCCAGCTCCTCCGTTCCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LCAGTSRWALGR*GFLPAPPFQLL
Trigger: CAGAAGCTGGAACGGAGGAGCTGGGAGGAAACCCCAGCGGCCGAGAGCCCAGCGGGACGTGCCCGCACAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 72 bp TGCCTCTGCCCGTGGCGGCTCAGGGCAGCTGCGGTCTaGCACACCTTGGCGCAGTGGGGGCAGGTAAAGCGG +
Preference number: 6 (lower is better)
Translates to: CLCPWRLRAAAV*HTLAQWGQVKR
Trigger: CCGCTTTACCTGCCCCCACTGCGCCAAGGTGTGCAAGACCGCAGCTGCCCTGAGCCGCCACGGGCAGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CCTGTAGACCCCCGCGTGCTGGCCCCTCGTCGGCACTaGGCCTCATGGGTCTGCAGCCGTTTGGGATGGATG +
Preference number: 6 (lower is better)
Translates to: PVDPRVLAPRRH*ASWVCSRLGWM
Trigger: CATCCATCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGCCAGCACGCGGGGGTCTACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GCCCGGGAGCTGTGGGAGCCCCCACCGTGGGCCTCTTaGTGCTTCCGCAGCTTTCTCAGGGTGGTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: ARELWEPPPWAS*CFRSFLRVVKV
Trigger: GACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCCACGGTGGGGGCTCCCACAGCTCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GCCAGCGCTGCCCTTGGAATAGGCAATGACAGGGGTTaGGGTGCCCCCGGGCCGCTCAGCAGCATGCCTCTG +
Preference number: 6 (lower is better)
Translates to: ASAALGIGNDRG*GAPGPLSSMPL
Trigger: CAGAGGCATGCTGCTGAGCGGCCCGGGGGCACCCCAACCCCTGTCATTGCCTATTCCAAGGGCAGCGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp AAGTCAGAGTCCTTCCAGCCCGTGGATTCCGGCCCTTaGCCTCCTCCGTGGTGGTGGCCATGGCTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: KSESFQPVDSGP*PPPWWWPWLAL
Trigger: CAGGGCCAGCCATGGCCACCACCACGGAGGAGGCCAAGGGCCGGAATCCACGGGCTGGAAGGACTCTGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 72 bp GGGCCTCTTGGTGCTTCCGCAGCTTTCTCAGGGTGGTaGAGGTCTGGGCACAGTCCCCGCATCGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GPLGASAAFSGW*RSGHSPRIGAS
Trigger: GGAGGCACCGATGCGGGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCAAGAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp GGCTCCCTGGCTGTAGGTCTTGTAGGGCCGCTTGGCTaGCCGCATGGGGAGCAGGCGGTAGAGCTTGAGTGT +
Preference number: 6 (lower is better)
Translates to: GSLAVGLVGPLG*PHGEQAVELEC
Trigger: ACACTCAAGCTCTACCGCCTGCTCCCCATGCGGGCAGCCAAGCGGCCCTACAAGACCTACAGCCAGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 72 bp CTCTCCGCTCAGCTCCCCAGGACGCAGGTCAGTCTCTaGGATGCGGCGCTTGACGATGGCCTCCTCCCCTAT +
Preference number: 6 (lower is better)
Translates to: LSAQLPRTQVSL*DAALDDGLLPY
Trigger: ATAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGTCCTGGGGAGCTGAGCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CCCCGCGTGCTGGCCCCTCGTCGGCACTGGGCCTCATaGGTCTGCAGCCGTTTGGGATGGATGAAGCTTTTT +
Preference number: 6 (lower is better)
Translates to: PRVLAPRRHWAS*VCSRLGWMKLF
Trigger: AAAAAGCTTCATCCATCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGCCAGCACGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GGGGACCCCCACCTCCACCAATCCCGCCCACTGGCTTaGCTGTGTAAGTCAGAGTCCTTCCAGCCCGTGGAT +
Preference number: 6 (lower is better)
Translates to: GDPHLHQSRPLA*LCKSESFQPVD
Trigger: ATCCACGGGCTGGAAGGACTCTGACTTACACAGCCAAGCCAGTGGGCGGGATTGGTGGAGGTGGGGGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp TGGTGCTTCCGCAGCTTTCTCAGGGTGGTGAAGGTCTaGGCACAGTCCCCGCATCGGTGCCTCCGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: WCFRSFLRVVKV*AQSPHRCLRSV
Trigger: CACAGAGCGGAGGCACCGATGCGGGGACTGTGCCCAGACCTTCACCACCCTGAGAAAGCTGCGGAAGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CCTGCCTCACCGCTGGATGAGGAGACTTGCATCTCTTaGGGGGCTTCCTCCTTGACATCCCCGGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: PASPLDEETCIS*GASSLTSPGLV
Trigger: CACCAGGCCCGGGGATGTCAAGGAGGAAGCCCCCCAAGAGATGCAAGTCTCCTCATCCAGCGGTGAGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp GTGCTGGCCCCTCGTCGGCACTGGGCCTCATGGGTCTaGAGCCGTTTGGGATGGATGAAGCTTTTTCCACAC +
Preference number: 6 (lower is better)
Translates to: VLAPRRHWASWV*SRLGWMKLFPH
Trigger: GTGTGGAAAAAGCTTCATCCATCCCAAACGGCTGCAGACCCATGAGGCCCAGTGCCGACGAGGGGCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp CCAGTGGAAATTCCTGCACAGGTGGGTATACATAGCTaGCCCCGCTTGCCACTACTGGGGGCTCCTCACCCC +
Preference number: 6 (lower is better)
Translates to: PVEIPAQVGIHS*PRLPLLGAPHP
Trigger: GGGGTGAGGAGCCCCCAGTAGTGGCAAGCGGGGGCAGCTATGTATACCCACCTGTGCAGGAATTTCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp TCCGCCACGAGTGTACATTGCTGTGTCTCTTCAGACTaGACAGGGTCACGTAGGAACGCTCGCAGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: SATSVHCCVSSD*TGSRRNARRPR
Trigger: GCGCGGCCTGCGAGCGTTCCTACGTGACCCTGTCCAGTCTGAAGAGACACAGCAATGTACACTCGTGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp ACTGGGGGCTCCTCACCCCCTGAAATGATAGGGTCCTaGAGTGAGGCGGTCTCGGAAGCTTCCTCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: TGGSSPPEMIGS*SEAVSEASSAA
Trigger: TGCTGCTGAGGAAGCTTCCGAGACCGCCTCACTCCAGGACCCTATCATTTCAGGGGGTGAGGAGCCCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp ACCGCCAGGTTCCCGGCCGCCCCCAATCAAGGCCAGTaGAAATTCCTGCACAGGTGGGTATACATAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TARFPAAPNQGQ*KFLHRWVYIAA
Trigger: GGCAGCTATGTATACCCACCTGTGCAGGAATTTCCACTGGCCTTGATTGGGGGCGGCCGGGAACCTGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 72 bp TCCCCAGGACGCAGGTCAGTCTCTGAGATGCGGCGCTaGACGATGGCCTCCTCCCCTATTCGCACAGTGATC +
Preference number: 6 (lower is better)
Translates to: SPGRRSVSEMRR*TMASSPIRTVI
Trigger: GATCACTGTGCGAATAGGGGAGGAGGCCATCGTCAAGCGCCGCATCTCAGAGACTGACCTGCGTCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 72 bp CTGAAGAAGGGACTTGAAGCAGCCAGGACGCTGCGGTaGGCAGGGAACTTGGTGTCTCCGGCTATGAGGGTG +
Preference number: 6 (lower is better)
Translates to: LKKGLEAARTLR*AGNLVSPAMRV
Trigger: CACCCTCATAGCCGGAGACACCAAGTTCCCTGCTCACCGCAGCGTCCTGGCTGCTTCAAGTCCCTTCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp CACTGGTACCTGCGCTCCCCCGTGTGCCACACTTCATaGTTCGTGCGGTACTCCGCCAGAGCAAACACTTTC +
Preference number: 6 (lower is better)
Translates to: HWYLRSPVCHTS*FVRYSARANTF
Trigger: GAAAGTGTTTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAGGTACCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp CAACAGAAGATGCACTGGTACCTGCGCTCCCCCGTGTaGCACACTTCATGCTTCGTGCGGTACTCCGCCAGA +
Preference number: 6 (lower is better)
Translates to: QQKMHWYLRSPV*HTSCFVRYSAR
Trigger: TCTGGCGGAGTACCGCACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAGGTACCAGTGCATCTTCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp CTCAGGGGGAGGAGGTGGGTATTCTCGTTTCTTGGGTaGCCTCGGGGGAGCAGTGTAAGTGATAACCGAGGC +
Preference number: 6 (lower is better)
Translates to: LRGRRWVFSFLG*PRGSSVSDNRG
Trigger: GCCTCGGTTATCACTTACACTGCTCCCCCGAGGCCACCCAAGAAACGAGAATACCCACCTCCTCCCCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 72 bp AGTAGGGCCTCCAGAGCTGGTCCTCCCCACCAGCCTTaGATTCCTCCTCATCCTCCTCCTCCTCCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: SRASRAGPPHQP*IPPHPPPPPLR
Trigger: ACGAAGAGGAGGAGGAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAGGACCAGCTCTGGAGGCCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 72 bp AGGGCCCCCGCACCCTTCTCATCAGGTAGGACCATGTaGAGAGCAACCGGGAGAGCGGCCAAGTTACTGAAG +
Preference number: 6 (lower is better)
Translates to: RAPAPFSSGRTM*RATGRAAKLLK
Trigger: CTTCAGTAACTTGGCCGCTCTCCCGGTTGCTCTCAACATGGTCCTACCTGATGAGAAGGGTGCGGGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CAA 90 bp TGTAGGAGTAGTAGGGCCTCCAGAGCTGGTCCTCCCCACCAGCCTTaGATTCCTCCTCATCCTCCTCCTCCTCCTCTTCGTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: CRSSRASRAGPPHQP*IPPHPPPPPLRPPP
Trigger: AGGAGGAGGACGAAGAGGAGGAGGAGGAGGATGAGGAGGAATCAAAGGCTGGTGGGGAGGACCAGCTCTGGAGGCCCTACTACTCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS CCA 72 bp GCCCCCAATCAAGGCCAGTGGAAATTCCTGCACAGGTaGGTATACATAGCTGCCCCCGCTTGCCACTACTGG +
Preference number: 6 (lower is better)
Translates to: APNQGQWKFLHR*VYIAAPACHYW
Trigger: CCAGTAGTGGCAAGCGGGGGCAGCTATGTATACCCACCTGTGCAGGAATTTCCACTGGCCTTGATTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS GCA 72 bp ACCTGCGCTCCCCCGTGTGCCACACTTCATGCTTCGTaGGGTACTCCGCCAGAGCAAACACTTTCTCACAAT +
Preference number: 6 (lower is better)
Translates to: TCAPPCATLHAS*GTPPEQTLSHN
Trigger: ATTGTGAGAAAGTGTTTGCTCTGGCGGAGTACCGCACGAAGCATGAAGTGTGGCACACGGGGGAGCGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311403.4
ENST00000380599.9
ENST00000639670.2
ENST00000639962.1
CDS TCA 72 bp CTTTTGCTGAAGATGAAACCGTTGTCCAAACTAGAATaGAAGCGGCCCAATTTTACCCTCGAGTCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: LLLKMKPLSKLE*KRPNFTLESSN
Trigger: GTTTGAAGACTCGAGGGTAAAATTGGGCCGCTTTCATTCTAGTTTGGACAACGGTTTCATCTTCAGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311403.4
ENST00000639962.1