RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB38 (Homo sapiens)

Ensembl gene IDs: ENSG00000177311

Ensembl transcript IDs: ENST00000321464.7, ENST00000441582.2, ENST00000503809.5, ENST00000504673.5, ENST00000506623.1, ENST00000507657.1, ENST00000507722.5, ENST00000509813.1, ENST00000509842.5, ENST00000509883.5, ENST00000510338.5, ENST00000510726.1, ENST00000512276.5, ENST00000512327.1, ENST00000512769.1, ENST00000513249.1, ENST00000513258.5, ENST00000513570.1, ENST00000513619.5, ENST00000514251.5, ENST00000636289.1, ENST00000637056.1, ENST00000637706.1

Found 761 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTACCTTaGACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGC +
Preference number: 1 (lower is better)
Translates to: AVTFKCLGIHYCSVP*TKSLGQSFSGMGDG
Trigger: GCCATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR TCA 90 bp CTGCAGGTCACGCTGAAACTGCATTCCGGATTCTGTTCACACTGGTaGTCAAAGGGTAGAAATGTTTTCTCTCTCCCTTCTATTCTGGCA +
Preference number: 1 (lower is better)
Translates to: LQVTLKLHSGFCSHW*SKGRNVFSLPSILA
Trigger: TGCCAGAATAGAAGGGAGAGAGAAAACATTTCTACCCTTTGATCACCAGTGTGAACAGAATCCGGAATGCAGTTTCAGCGTGACCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CCA 90 bp ACAAAAACATGGGCTTTGGAGTCAGGCAGACCTAGGTTAGCATCCTaGCTTTGTCTGGTTGTGAGACCTTCTCAAAGTCACTATAAAACG +
Preference number: 1 (lower is better)
Translates to: TKTWALESGRPRLAS*LCLVVRPSQSHYKT
Trigger: CGTTTTATAGTGACTTTGAGAAGGTCTCACAACCAGACAAAGCCAGGATGCTAACCTAGGTCTGCCTGACTCCAAAGCCCATGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR TCA 90 bp TTCCATCTGTCAAATCCAATGAACATGAATGACTGCAGGTCACGCTaGAACTGCATTCCGGATTCTGTTCACACTGGTGATCAAAGGGTA +
Preference number: 1 (lower is better)
Translates to: FHLSNPMNMNDCRSR*NCIPDSVHTGDQRV
Trigger: TACCCTTTGATCACCAGTGTGAACAGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTCATTCATGTTCATTGGATTTGACAGATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR TCA 90 bp TTCGATAACCTTGGGTTTCCATCTGTCAAATCCAATGAACATGAATaGCTGCAGGTCACGCTGAAACTGCATTCCGGATTCTGTTCACAC +
Preference number: 1 (lower is better)
Translates to: FDNLGFPSVKSNEHE*LQVTLKLHSGFCSH
Trigger: GTGTGAACAGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTCATTCATGTTCATTGGATTTGACAGATGGAAACCCAAGGTTATCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CCA 90 bp ACAAGGCTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTaGGAATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGAC +
Preference number: 1 (lower is better)
Translates to: TRLVIVGIRQSLSSA*EFTTAVYLALNLLD
Trigger: GTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAGCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR TCA 90 bp ATGTTTTCTCTCTCCCTTCTATTCTGGCAGTTTGAAAAAGAATCATaGGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGC +
Preference number: 1 (lower is better)
Translates to: MFSLSLLFWQFEKES*VPAFQEPSPHDRIC
Trigger: GCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATTCTTTTTCAAACTGCCAGAATAGAAGGGAGAGAGAAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CCA 90 bp TTAAATGCTTTCTTACCCACCCAAATCCATACTAAGTCTTCTTCATaGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTA +
Preference number: 1 (lower is better)
Translates to: LNAFLPTQIHTKSSS*RHHTCRQKPESFEL
Trigger: TAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCCATGAAGAAGACTTAGTATGGATTTGGGTGGGTAAGAAAGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACACAGTGGAATGGGAGATaGCAGGTTCCACTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTQWNGR*QVPLEP
Trigger: GGGCTCAAGTGGAACCTGCCATCTCCCATTCCACTG...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAATGGCAGGTTCCACTTaGGCCCTTAAGTCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTMAGST*ALKSVW
Trigger: CCAGACAGACTTAAGGGCTCAAGTGGAACCTGCCAT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTCCATGGCCTTGTGGTaGTTGGAAGACTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSMALW*LEDCRE
Trigger: CTCTCTGCAGTCTTCCAACCACCACAAGGCCATGGA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTCCATGGCCTTGTGGTaGTTGGAAGACTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSMALW*LEDCRE
Trigger: CTCTCTGCAGTCTTCCAACCACCACAAGGCCATGGA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACAGTGGAATGGGAGATaGCAGGTTCCACTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVQWNGR*QVPLEP
Trigger: GGGCTCAAGTGGAACCTGCCATCTCCCATTCCACTG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCCCTCTTTCATTCTCTaGGATGAGGCCATTGCAAAG +
Preference number: 2 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVPSFIL*DEAIAK
Trigger: CTTTGCAATGGCCTCATCTCAGAGAATGAAAGAGGG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAATGGCAGGTTCCACTTaGGCCCTTAAGTCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVMAGST*ALKSVW
Trigger: CCAGACAGACTTAAGGGCTCAAGTGGAACCTGCCAT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACCCATAGATAAGGCATaGCCTATGTTTTCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRPIDKA*PMFSVN
Trigger: ATTCACAGAAAACATAGGTCATGCCTTATCTATGGG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCACTTTCAAGTGCCTaGGAATTCACTACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSLSSA*EFTTAV
Trigger: CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGCCTTATTTTCTCCAGTaGCTAAAGACAGTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGPYFLQ*LKTVQQ
Trigger: CTGCTGAACTGTCTTTAGTCACTGGAGAAAATAAGG...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCCTTATTTTCTCCAGTaGCTAAAGACAGTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVPYFLQ*LKTVQQ
Trigger: CTGCTGAACTGTCTTTAGTCACTGGAGAAAATAAGG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCCCATAGATAAGGCATaGCCTATGTTTTCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVPIDKA*PMFSVN
Trigger: ATTCACAGAAAACATAGGTCATGCCTTATCTATGGG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGACTGCAGGTCACGCTaGAACTGCATTCCGGATTCT +
Preference number: 2 (lower is better)
Translates to: SGLSKTLNHQKTSISFILDCRSR*NCIPDS
Trigger: AGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR CCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACTTTCACAAGAAACTTaGGATATTGGAGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGLSQET*DIGGVS
Trigger: GCTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CAA 90 bp CTTCTTCATGGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTaGAGCTACTTCTTCACAATGATAACCTTCCAATCTTCGATAACC +
Preference number: 2 (lower is better)
Translates to: LLHGDITLVDRNRSP*SYFFTMITFQSSIT
Trigger: GGTTATCGAAGATTGGAAGGTTATCATTGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCCATGAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACATCTTCAGGATATCTaGCCCTTATTTTCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVHLQDI*PLFSPV
Trigger: CACTGGAGAAAATAAGGGTCAGATATCCTGAAGATG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTTGGTGGTTGGAAGACTaGAGAGAGTTTCAGAACAAT +
Preference number: 2 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTWWLED*REFQNN
Trigger: ATTGTTCTGAAACTCTCTGCAGTCTTCCAACCACCA...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR GCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATACTGCAGTGTACCTTaGACTAAATCTCTTGGACAG +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVYCSVP*TKSLGQ
Trigger: CTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAGAAACTTGGGATATTaGAGGAGTCAGCTATTTTGT +
Preference number: 2 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVRNLGY*RSQLFC
Trigger: ACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CAA 90 bp GAATTCTGGTGCGTGTGTGTTAATGAAATAGCCTATGTAAAGACATaGCCCAGTGCCTGGTACTCAATAAATGTAATTTGTTTCCCACGG +
Preference number: 2 (lower is better)
Translates to: EFWCVCVNEIAYVKT*PSAWYSINVICFPR
Trigger: CCGTGGGAAACAAATTACATTTATTGAGTACCAGGCACTGGGCAATGTCTTTACATAGGCTATTTCATTAACACACACGCACCAGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAAATTTCACTCCTTCATaGCTGTCACATGGACAAAAT +
Preference number: 2 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGNFTPS*LSHGQN
Trigger: ATTTTGTCCATGTGACAGTCATGAAGGAGTGAAATT...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CAA 90 bp TTGAGCTACTTCTTCACAATGATAACCTTCCAATCTTCGATAACCTaGGGTTTCCATCTGTCAAATCCAATGAACATGAATGACTGCAGG +
Preference number: 2 (lower is better)
Translates to: LSYFFTMITFQSSIT*GFHLSNPMNMNDCR
Trigger: CCTGCAGTCATTCATGTTCATTGGATTTGACAGATGGAAACCCAAGGTTATCGAAGATTGGAAGGTTATCATTGTGAAGAAGTAGCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACAATTTCACTCCTTCATaGCTGTCACATGGACAAAAT +
Preference number: 2 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHNFTPS*LSHGQN
Trigger: ATTTTGTCCATGTGACAGTCATGAAGGAGTGAAATT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTTCATTCTCTGAGATaGGGCCATTGCAAAGTAATA +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFHSLR*GHCKVI
Trigger: TATTACTTTGCAATGGCCTCATCTCAGAGAATGAAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAGAAACTTGGGATATTaGAGGAGTCAGCTATTTTGT +
Preference number: 2 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVRNLGY*RSQLFC
Trigger: ACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCTTTCACAAGAAACTTaGGATATTGGAGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLSQET*DIGGVS
Trigger: GCTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTATCTCTACAGGGGATATaGACAGTTAAAAGTTATAGT +
Preference number: 2 (lower is better)
Translates to: HIRAGRETSLQVILYLGLSLQGI*TVKSYS
Trigger: ACTATAACTTTTAACTGTCCATATCCCCTGTAGAGA...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGCTCTCCCTTCTATTCTaGCAGTTTGAAAAAGAATCA +
Preference number: 2 (lower is better)
Translates to: SGLSKTLNHQKTSISFILLSLLF*QFEKES
Trigger: TGATTCTTTTTCAAACTGCCAGAATAGAAGGGAGAG...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR GCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGTGGTCATGTACTCAATaGATACTTAAACATCACTCA +
Preference number: 2 (lower is better)
Translates to: SGLSKTLNHQKTSISFILWSCTQ*ILKHHS
Trigger: TGAGTGATGTTTAAGTATGCATTGAGTACATGACCA...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR GCA 72 bp CTGTGCTGCCTGAGCCACCGACATCCCCTCTCACATTaGCCACTGGGACAAACTGCAGGCATTTGCAAGATA +
Preference number: 3 (lower is better)
Translates to: LCCLSHRHPLSH*PLGQTAGICKI
Trigger: TATCTTGCAAATGCCTGCAGTTTGTCCCAGTGGGCAATGTGAGAGGGGATGTCGGTGGCTCAGGCAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR TCA 72 bp GTAATTTTCTCTGTGTTGGTGATGGACTGTGCTGCCTaGGCCACCGACATCCCCTCTCACATTGCCCACTGG +
Preference number: 3 (lower is better)
Translates to: VIFSVLVMDCAA*ATDIPSHIAHW
Trigger: CCAGTGGGCAATGTGAGAGGGGATGTCGGTGGCTCAGGCAGCACAGTCCATCACCAACACAGAGAAAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR GCA 72 bp GGCAGTAATTTTCTCTGTGTTGGTGATGGACTGTGCTaGCTGAGCCACCGACATCCCCTCTCACATTGCCCA +
Preference number: 3 (lower is better)
Translates to: GSNFLCVGDGLC*LSHRHPLSHCP
Trigger: TGGGCAATGTGAGAGGGGATGTCGGTGGCTCAGGCAGCACAGTCCATCACCAACACAGAGAAAATTACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR GCA 72 bp CCTGGCAGTAATTTTCTCTGTGTTGGTGATGGACTGTaGTGCCTGAGCCACCGACATCCCCTCTCACATTGC +
Preference number: 3 (lower is better)
Translates to: PGSNFLCVGDGL*CLSHRHPLSHC
Trigger: GCAATGTGAGAGGGGATGTCGGTGGCTCAGGCAGCACAGTCCATCACCAACACAGAGAAAATTACTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR GCA 72 bp ACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACTaGAGAGAGTTTCAGAACAATGTGACCCTCTTTCAT +
Preference number: 3 (lower is better)
Translates to: TPTSMALWWLED*REFQNNVTLFH
Trigger: ATGAAAGAGGGTCACATTGTTCTGAAACTCTCTGCAGTCTTCCAACCACCACAAGGCCATGGATGTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTCTGAGATGAGGCCATaGCAAAGTAATATGCAGCAC +
Preference number: 3 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMSEMRP*QSNMQH
Trigger: GTGCTGCATATTACTTTGCAATGGCCTCATCTCAGA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAAAGAAACTTGGGATATaGGAGGAGTCAGCTATTTTG +
Preference number: 3 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRKKLGI*EESAIL
Trigger: CAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAGGGTGGGGGTTCCTTaGTCCTTTTGCTTTATACTA +
Preference number: 3 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGRVGVP*SFCFIL
Trigger: TAGTATAAAGCAAAAGGACAAAGGAACCCCCACCCT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR GCA 72 bp TTCAAGTGCCTGGGAATTCACTACTGCAGTGTACCTTaGACTAAATCTCTTGGACAGTCCTTCAGTGGAATG +
Preference number: 3 (lower is better)
Translates to: FKCLGIHYCSVP*TKSLGQSFSGM
Trigger: CATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAGGCACTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR TCA 72 bp CTCTCCCTTCTATTCTGGCAGTTTGAAAAAGAATCATaGGTTCCGGCTTTCCAGGAACCTAGTCCACATGAT +
Preference number: 3 (lower is better)
Translates to: LSLLFWQFEKES*VPAFQEPSPHD
Trigger: ATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATTCTTTTTCAAACTGCCAGAATAGAAGGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR TCA 72 bp TCAAATCCAATGAACATGAATGACTGCAGGTCACGCTaGAACTGCATTCCGGATTCTGTTCACACTGGTGAT +
Preference number: 3 (lower is better)
Translates to: SNPMNMNDCRSR*NCIPDSVHTGD
Trigger: ATCACCAGTGTGAACAGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTCATTCATGTTCATTGGATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR GCA 72 bp CCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATaGTGTAGGGCAATTAGATTTGAGGGTAGTGTTGAT +
Preference number: 3 (lower is better)
Translates to: PAFQEPSPHDRI*CRAIRFEGSVD
Trigger: ATCAACACTACCCTCAAATCTAATTGCCCTACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CCA 72 bp TTCTTACCCACCCAAATCCATACTAAGTCTTCTTCATaGAGACATCACACTTGTAGACAGAAACCGGAGTCC +
Preference number: 3 (lower is better)
Translates to: FLPTQIHTKSSS*RHHTCRQKPES
Trigger: GGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCCATGAAGAAGACTTAGTATGGATTTGGGTGGGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAAGAAACTTGGGATATaGGAGGAGTCAGCTATTTTG +
Preference number: 3 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTKKLGI*EESAIL
Trigger: CAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGGTTCCTTTGTCCTTTaGCTTTATACTAGTCTGTAC +
Preference number: 3 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGGSFVL*LYTSLY
Trigger: GTACAGACTAGTATAAAGCAAAAGGACAAAGGAACC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CCA 72 bp GTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTaGGAATTCACTACTGCAGTGTACCTTGCACTAAAT +
Preference number: 3 (lower is better)
Translates to: VIVGIRQSLSSA*EFTTAVYLALN
Trigger: ATTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR GCA 72 bp AACTTCAGTGGGTTTTTAGCAAGGGGTCTAGATGTCTaGAAATATGAAGACAGAGCATCTGGCTTTGTAGAT +
Preference number: 3 (lower is better)
Translates to: NFSGFLARGLDV*KYEDRASGFVD
Trigger: ATCTACAAAGCCAGATGCTCTGTCTTCATATTTGCAGACATCTAGACCCCTTGCTAAAAACCCACTGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCACTTTCACAAGAAACTaGGGATATTGGAGGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCTFTRN*GYWRSQ
Trigger: CTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAGT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAATCAGTCCTCATTATTaGCAGATCTATTGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVISPHY*QIYCSS
Trigger: TGAGGAGCAATAGATCTGCAAATAATGAGGACTGAT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR-3UTR CAA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTAGTAGGGCAATTAGATTaGAGGGTAGTGTTGATGGTG +
Preference number: 3 (lower is better)
Translates to: HIRAGRETSLQVILYLGLVGQLD*RVVLMV
Trigger: CACCATCAACACTACCCTCAAATCTAATTGCCCTAC...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGCTTGCACTAAATCTCTaGGACAGTCCTTCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: SGLSKTLNHQKTSISFILLALNL*DSPSVE
Trigger: TTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAG...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR GCA 72 bp AACAGTTATCAAATTTTTGGTGAATCTGGTTTGGATTaGCCTTCCAATACAAAATTGATGCTACTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: NSYQIFGESGLD*PSNTKLMLLAS
Trigger: GCTGGCCAGTAGCATCAATTTTGTATTGGAAGGGCAATCCAAACCAGATTCACCAAAAATTTGATAACTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGAGGAGTCAGCTATTTaGTTTTTGTGCACTTTGCAT +
Preference number: 3 (lower is better)
Translates to: SGLSKTLNHQKTSISFILEESAI*FLCTLH
Trigger: ATGCAAAGTGCACAAAAACAAAATAGCTGACTCCTC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGGAGGAGTCAGCTATTTaGTTTTTGTGCACTTTGCAT +
Preference number: 3 (lower is better)
Translates to: LHQSSLFADLLLLIILYREESAI*FLCTLH
Trigger: ATGCAAAGTGCACAAAAACAAAATAGCTGACTCCTC...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR GCA 72 bp TGCTTTCTATTGATTTTTACATCAGTCCTCATTATTTaGAGATCTATTGCTCCTCATAATTCTCTACAGGGG +
Preference number: 3 (lower is better)
Translates to: CFLLIFTSVLII*RSIAPHNSLQG
Trigger: CCCCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAAAAATCAATAGAAAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATGTGCGGACAGGCTCTaGCTCGTGGCAGACGTCCGT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRCADRL*LVADVR
Trigger: ACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CAA 72 bp ACTGTGCTGCCTGAGCCACCGACATCCCCTCTCACATaGCCCACTGGGACAAACTGCAGGCATTTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: TVLPEPPTSPLT*PTGTNCRHLQD
Trigger: ATCTTGCAAATGCCTGCAGTTTGTCCCAGTGGGCAATGTGAGAGGGGATGTCGGTGGCTCAGGCAGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGGCTGCTGTGTACAATaGCCGAGGGTGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRGCCVQ*PRVQSH
Trigger: GTGGCTCTGCACCCTCGGTCATTGTACACAGCAGCC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACAGAGGTGGAACCTCTaGGGCTGGCGGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGQRWNL*GWRPGN
Trigger: GTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGAAGGGCTCTGGAACTaGTTGGCGCAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGREGLWN*LAQSSQ
Trigger: CTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCCTTC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGACAGGCTCTGCCTCGTaGCAGACGTCCGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMTGSAS*QTSVLS
Trigger: GGAGAGGACGGACGTCTGCCACGAGGCAGAGCCTGT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGGCTGCTGTGTACAATaGCCGAGGGTGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMGCCVQ*PRVQSH
Trigger: GTGGCTCTGCACCCTCGGTCATTGTACACAGCAGCC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTCAGAGGTGGAACCTCTaGGGCTGGCGGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTQRWNL*GWRPGN
Trigger: GTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTG...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGACAGGCTCTGCCTCGTaGCAGACGTCCGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGTGSAS*QTSVLS
Trigger: GGAGAGGACGGACGTCTGCCACGAGGCAGAGCCTGT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTGGAACCTCTGCGGCTaGCGGCCCGGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVWNLCG*RPGNIR
Trigger: TCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATTGGCAAAGCCCGAGTaGGCTGTCTCCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRLAKPE*AVSTGF
Trigger: GAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGGGTGGGGTGGAGGGTaGGGGTTCCTTTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRGWGGG*GFLCPF
Trigger: AAAAGGACAAAGGAACCCCCACCCTCCACCCCACCC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAGTGCTCGGCAAGTGTaGGGACAGGCTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSARQV*GQALPR
Trigger: ACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAGTGCTCGGCAAGTGTaGGGACAGGCTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSARQV*GQALPR
Trigger: ACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGTCTCCACTGGGTTCTaGGTCATTCCCCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRVSTGF*VIPLWQ
Trigger: TTGCCACAGGGGAATGACCCAGAACCCAGTGGAGAC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGGCTCTGGAACTGCTTaGCGCAGAGCTCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTGSGTA*RRARRH
Trigger: ATGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGAGTGTGGAAGGGCTCTaGAACTGCTTGGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMSVEGL*NCLAQS
Trigger: GCTCTGCGCCAAGCAGTTCCAGAGCCCTTCCACACT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCCTGGGTTGGCTTGTaGAGCTGCATGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSWVGL*SCMWAL
Trigger: CAGTGCCCACATGCAGCTTCACAAGCCAACCCAGGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACATCCCCTCTCACATTaGCCACTGGGACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRHPLSH*PLGQTA
Trigger: TGCAGTTTGTCCCAGTGGGCAATGTGAGAGGGGATG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATGGAACCTCTGCGGCTaGCGGCCCGGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVWNLCG*RPGNIR
Trigger: TCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGATTGTACACCAGAGGTaGAACCTCTGCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVIVHQR*NLCGWR
Trigger: CCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAAT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACCAGGAATGGGCATGTaGCTTGACCTCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRPGMGM*LDLMQI
Trigger: GATCTGCATGAGGTCAAGCCACATGCCCATTCCTGG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACGGTGGGGCCTTCCTTaGTTTCCAGCCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVRWGLP*FPAPTA
Trigger: AGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGGGTGGGGTGGAGGGTaGGGGTTCCTTTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVGWGGG*GFLCPF
Trigger: AAAAGGACAAAGGAACCCCCACCCTCCACCCCACCC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAAATGGGCATGTGGCTTaGCCTCATGCAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRNGHVA*PHADLF
Trigger: GAACAGATCTGCATGAGGTCAAGCCACATGCCCATT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGCAGAGCCACTGTAGCTaGTCACAGAGGCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGQSHCS*SQRRHS
Trigger: AGAATGCCGCCTCTGTGATCAGCTACAGTGGCTCTG...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGTGCATGATCACCGATaGAAACTGGCTGCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRVHDHR*KLAAVY
Trigger: GTACACAGCAGCCAGTTTTCATCGGTGATCATGCAC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACATGGACTGTGCTGCCTaGGCCACCGACATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHMDCAA*ATDIPS
Trigger: AGAGGGGATGTCGGTGGCTCAGGCAGCACAGTCCAT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTGTGCGGACAGGCTCTaGCTCGTGGCAGACGTCCGT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCCADRL*LVADVR
Trigger: ACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAACAGGTACATCCCCTaGCCGGAGGTCAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGNRYIP*PEVRTD
Trigger: GTCAGTTCTGACCTCCGGGCAGGGGATGTACCTGTT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAACAGGTACATCCCCTaGCCGGAGGTCAGAACTGAC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTNRYIP*PEVRTD
Trigger: GTCAGTTCTGACCTCCGGGCAGGGGATGTACCTGTT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAGGCTCTGTGGTTGCTaGTGGTCATGGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTRLCGC*WSWQQW
Trigger: CCATTGCTGCCATGACCAGCAGCAACCACAGAGCCT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAGGCTCTGTGGTTGCTaGTGGTCATGGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGRLCGC*WSWQQW
Trigger: CCATTGCTGCCATGACCAGCAGCAACCACAGAGCCT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGGGCTCCTGTTTCCGTaGTCCTTCCTCCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGGLLFP*SFLQLT
Trigger: AGTCAACTGGAGGAAGGAGCACGGAAACAGGAGCCC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACACTGAGAGAGAAGAACTaGTTGAACCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTLREKN*LNPGGG
Trigger: TCCGCCTCCCGGGTTCAAGCAGTTCTTCTCTCTCAG...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAATGTTTCCAATGGGATaGCTGGACTGTTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRMFPMG*LDCWSG
Trigger: CCCTGACCAACAGTCCAGCCATCCCATTGGAAACAT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGCCCTTAAGTCTGTCTaGAATAGACCCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRALKSV*NRPPHP
Trigger: TGGATGTGGGGGTCTATTCCAGACAGACTTAAGGGC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCAGTGGAATGGGAGATaGCAGGTTCCACTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVQWNGR*QVPLEP
Trigger: GGGCTCAAGTGGAACCTGCCATCTCCCATTCCACTG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTGTGAAAGTCGTCCTTaGGGTCCCTGGAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGCESRP*GPWKGT
Trigger: TGTCCCTTTCCAGGGACCTCAAGGACGACTTTCACA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAGTACCGTGTCACTGTaGAAGTCGTCCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSTVSL*KSSLRS
Trigger: GGACCTCAAGGACGACTTTCACAGTGACACGGTACT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGGGACCCGGGGAATTTaGGAAGTTGCGATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGGTRGI*EVAISK
Trigger: CTTACTGATCGCAACTTCTCAAATTCCCCGGGTCCC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGGGACCCGGGGAATTTaGGAAGTTGCGATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVGTRGI*EVAISK
Trigger: CTTACTGATCGCAACTTCTCAAATTCCCCGGGTCCC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGAGATTTTGAACGAGTaGGAACAGCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGREILNE*EQQLVV
Trigger: CACAACCAGCTGCTGTTCTCACTCGTTCAAAATCTC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAATCTCATGTGCATTTTaGGTGTGGAAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRISCAF*VWKGSG
Trigger: TCCAGAGCCCTTCCACACTCAAAATGCACATGAGAT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAATTCTCCAAGGGATTTaGGTTTTCGTGGCACACGTC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRILQGI*VFVAHV
Trigger: GACGTGTGCCACGAAAACTCAAATCCCTTGGAGAAT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGACTGCAGGTCACGCTaGAACTGCATTCCGGATTCT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVDCRSR*NCIPDS
Trigger: AGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTTTGTTTCCCACGGATaGGTGGAGCAGAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMFVSHG*VEQNAS
Trigger: GGAAGCATTCTGCTCCACTCATCCGTGGGAAACAAA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGAAACAGCGTATGAGTaGTCGGCAAGTGTGCGGACA +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVETAYE*SASVRT
Trigger: TGTCCGCACACTTGCCGAGCACTCATACGCTGTTTC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTACAATGACCGAGGGTaGAGAGCCACTGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMYNDRG*RATVAD
Trigger: ATCAGCTACAGTGGCTCTGCACCCTCGGTCATTGTA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACACCGTCCGCAGGTCTTaGACTGGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHTVRRS*TGMASP
Trigger: GGGAGAAGCCATACCAGTGCAAGACCTGCGGACGGT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATTCTGTAAGTTTCCTTaGACCGAAAAGCACCGTCCG +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRFCKFP*TEKHRP
Trigger: CGGACGGTGCTTTTCGGTGCAAGGAAACTTACAGAA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGCAGTCACTTTCAAGTaGCTGGGAATTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRAVTFK*LGIHYC
Trigger: GCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGCACATCAAGATCTGCTaGCCGGAAAGCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGHIKIC*PESLLQ
Trigger: CTGCAGAAGGCTTTCCGGGCAGCAGATCTTGATGTG...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACATTGTACACCAGAGGTaGAACCTCTGCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHIVHQR*NLCGWR
Trigger: CCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAAT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGGATGGCTGGACTGTTaGTCAGGGTGTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRGWLDC*SGCLQY
Trigger: ATACTGTAAACACCCTGACCAACAGTCCAGCCATCC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACCTCCTCTCCCCATTTaGTACCCTCTGCATTTTGTA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRPPLPI*YPLHFV
Trigger: TACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACAACATTACTATTTGTaGAGGTTCCCGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRQHYYL*RFPAEQ
Trigger: CTGCTCTGCCGGGAACCTCCACAAATAGTAATGTTG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTTTGGCAAAGCCCGAGTaGGCTGTCTCCACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTLAKPE*AVSTGF
Trigger: GAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAA...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGGAAGAAACAGCGTATaGGTGCTCGGCAAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTGRNSV*VLGKCA
Trigger: CGCACACTTGCCGAGCACTCATACGCTGTTTCTTCC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGCTGCATGTGGGCACTaGGCAGAGTGCTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCAACGH*AECCCQ
Trigger: TTGACAGCAGCACTCTGCTCAGTGCCCACATGCAGC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACCCGGAGGTCAGAACTaGCAGCATTTTCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGPGGQN*QHFQWK
Trigger: CTTCCACTGAAAATGCTGTCAGTTCTGACCTCCGGG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACTTTCAGGGACTGACTaGCAGCTGGGTCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGLSGTD*QLGLKR
Trigger: CCTTTTCAGACCCAGCTGTCAGTCAGTCCCTGAAAG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTCATCTTTCAGGGACTaGCTGACAGCTGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSSFRD*LTAGSE
Trigger: TTCAGACCCAGCTGTCAGTCAGTCCCTGAAAGATGA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCATCTTTCAGGGACTaGCTGACAGCTGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSSFRD*LTAGSE
Trigger: TTCAGACCCAGCTGTCAGTCAGTCCCTGAAAGATGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGGCTCCTCCTGCATCTaGTACTTGGGTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTGSSCI*YLGLLP
Trigger: AGGGAGAAGACCCAAGTATCAGATGCAGGAGGAGCC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGGCTCCTCCTGCATCTaGTACTTGGGTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHGSSCI*YLGLLP
Trigger: AGGGAGAAGACCCAAGTATCAGATGCAGGAGGAGCC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGCCTTGTTGCAATACTaGCAGACGAACTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMALLQY*QTNSFK
Trigger: CTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGGC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGATTCTCCAAGGGATTTaGGTTTTCGTGGCACACGTC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMILQGI*VFVAHV
Trigger: GACGTGTGCCACGAAAACTCAAATCCCTTGGAGAAT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATACAATGACCGAGGGTaGAGAGCCACTGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTYNDRG*RATVAD
Trigger: ATCAGCTACAGTGGCTCTGCACCCTCGGTCATTGTA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGGAATCCTGGTCACTTaGGTCATCGAACACTTCACT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMGILVT*VIEHFT
Trigger: AGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATCACAGAGTTCACACTaGAGCTTGGGCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRSQSSH*SLGISL
Trigger: TAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGAAGGGCTCTGGAACTaGTTGGCGCAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLEGLWN*LAQSSQ
Trigger: CTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCCTTC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGCTCCAGGACGTGGCTaGAAATACAGATTGTATGGC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGAPGRG*KYRLYG
Trigger: GCCATACAATCTGTATTTCCAGCCACGTCCTGGAGC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTGCAGATGTTTCCAATaGGATGGCTGGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMCRCFQ*DGWTVG
Trigger: ACCAACAGTCCAGCCATCCCATTGGAAACATCTGCA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGTACATTGGCAGAAGTaGGTATGTCCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMVHWQK*VCPDMQ
Trigger: CTGCATGTCAGGACATACCCACTTCTGCCAATGTAC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAGGTTGCTGCTGGTCATaGCAGCAATGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGGCCWS*QQWHCC
Trigger: ACAGCAATGCCATTGCTGCCATGACCAGCAGCAACC...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGTCTCCACTGGGTTCTaGGTCATTCCCCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVVSTGF*VIPLWQ
Trigger: TTGCCACAGGGGAATGACCCAGAACCCAGTGGAGAC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCGGTGGGGCCTTCCTTaGTTTCCAGCCCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALRWGLP*FPAPTA
Trigger: AGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGAAGTAAGATGTCGGTaGGGCCTTCCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTEVRCR*GLPWFP
Trigger: TGGAAACCAAGGAAGGCCCCACCGACATCTTACTTC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAGAGCTCGCAGGCATATaGCCGAGAAGTAAGATGTCG +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGELAGI*PRSKMS
Trigger: CGACATCTTACTTCTCGGCCATATGCCTGCGAGCTC...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATCCACATATAAGGGCTaGGAGAGAGACATCACTACA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRSTYKG*ERDITT
Trigger: TGTAGTGATGTCTCTCTCCCAGCCCTTATATGTGGA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGCCTAGGTTAGCATCCTaGCTTTGTCTGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMPRLAS*LCLVVR
Trigger: TCTCACAACCAGACAAAGCCAGGATGCTAACCTAGG...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVGNPWF*VLHFFH
Trigger: GTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGGNPWF*VLHFFH
Trigger: GTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAGTACCGTGTCACTGTaGAAGTCGTCCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVSTVSL*KSSLRS
Trigger: GGACCTCAAGGACGACTTTCACAGTGACACGGTACT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGAAGAAACAGCGTATaGGTGCTCGGCAAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGRNSV*VLGKCA
Trigger: CGCACACTTGCCGAGCACTCATACGCTGTTTCTTCC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGCTGCATGTGGGCACTaGGCAGAGTGCTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLAACGH*AECCCQ
Trigger: TTGACAGCAGCACTCTGCTCAGTGCCCACATGCAGC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTCCTGGGTTGGCTTGTaGAGCTGCATGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLSWVGL*SCMWAL
Trigger: CAGTGCCCACATGCAGCTTCACAAGCCAACCCAGGA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCCCGGAGGTCAGAACTaGCAGCATTTTCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHPGGQN*QHFQWK
Trigger: CTTCCACTGAAAATGCTGTCAGTTCTGACCTCCGGG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTACTGACAGCTGGGTCTaGAAAGGCTCTGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTTDSWV*KGSVVA
Trigger: AGCAACCACAGAGCCTTTTCAGACCCAGCTGTCAGT...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACTTTCAGGGACTGACTaGCAGCTGGGTCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVLSGTD*QLGLKR
Trigger: CCTTTTCAGACCCAGCTGTCAGTCAGTCCCTGAAAG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACATGGCAGGTTCCACTTaGGCCCTTAAGTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHMAGST*ALKSVW
Trigger: CCAGACAGACTTAAGGGCTCAAGTGGAACCTGCCAT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGAAACAGCGTATGAGTaGTCGGCAAGTGTGCGGACA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHETAYE*SASVRT
Trigger: TGTCCGCACACTTGCCGAGCACTCATACGCTGTTTC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAATGCAGATCTGTTCATaGCGATCCAACCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTMQICS*RSNLFR
Trigger: CCTGAACAGGTTGGATCGGCATGAACAGATCTGCAT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAAAAAGGCTCTGTGGTTaGTGCTGGTCATGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGKRLCG*CWSWQQ
Trigger: TTGCTGCCATGACCAGCAGCAACCACAGAGCCTTTT...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGTTTCCAGCCCCCACTaGTTTGTCTCCATCACAGAG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVVSSPH*FVSITE
Trigger: CTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAAC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGCAGTCACTTTCAAGTaGCTGGGAATTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGAVTFK*LGIHYC
Trigger: GCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGTGGTGAGCCAAGATTaGGCCATTGTACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTVVSQD*AIVLQP
Trigger: AGGCTGGAGTACAATGGCGCAATCTTGGCTCACCAC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCCAGCTCCAGGACGTaGCTGGAAATACAGATTGTA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSSSRT*LEIQIV
Trigger: TACAATCTGTATTTCCAGCCACGTCCTGGAGCTGGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTATGGAGAATGTCTTTaGCTTCCGGCATGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMYGECL*LPACFR
Trigger: CCGAAAACATGCCGGAAGCCAAAGACATTCTCCATA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATGCTGTCAAAGGCTTTaGAACAGCAGCTACAATTGT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRCCQRL*NSSYNC
Trigger: ACAATTGTAGCTGCTGTTCCAAAGCCTTTGACAGCA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTCCAGGAATGGGCATGTaGCTTGACCTCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTPGMGM*LDLMQI
Trigger: GATCTGCATGAGGTCAAGCCACATGCCCATTCCTGG...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACATGTGGTCCGTGTCTaGCAAAGTACTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGHVVRV*QSTSGT
Trigger: AGTACCGGAAGTACTTTGCCAGACACGGACCACATG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGGATGGCTGGACTGTTaGTCAGGGTGTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTGWLDC*SGCLQY
Trigger: ATACTGTAAACACCCTGACCAACAGTCCAGCCATCC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTGCAGATGTTTCCAATaGGATGGCTGGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGCRCFQ*DGWTVG
Trigger: ACCAACAGTCCAGCCATCCCATTGGAAACATCTGCA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCTCTGTGGTTGCTGCTaGTCATGGCAGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHLCGCC*SWQQWH
Trigger: ATGCCATTGCTGCCATGACCAGCAGCAACCACAGAG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTTGTCAGTGGAATCCTaGTCACTTGCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVLSVES*SLASSN
Trigger: GTTCGATGACGCAAGTGACCAGGATTCCACTGACAA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGCCACGGTTTGTCAGTaGAATCCTGGTCACTTGCGT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVATVCQ*NPGHLR
Trigger: ACGCAAGTGACCAGGATTCCACTGACAAACCGTGGC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGGGTATTTACATTTATaGCTCGGGCTCCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVGYLHL*LGLLFP
Trigger: CGGAAACAGGAGCCCGAGCCATAAATGTAAATACCC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGGCTCTGGAACTGCTTaGCGCAGAGCTCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALGSGTA*RRARRH
Trigger: ATGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATCCATGGCCTTGTGGTaGTTGGAAGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVSMALW*LEDCRE
Trigger: CTCTCTGCAGTCTTCCAACCACCACAAGGCCATGGA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGATGGACAGTCCTTCAGTaGAATGGGAGATGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGWTVLQ*NGRWQV
Trigger: AACCTGCCATCTCCCATTCCACTGAAGGACTGTCCA...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACAATGGGCATGTGGCTTaGCCTCATGCAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHNGHVA*PHADLF
Trigger: GAACAGATCTGCATGAGGTCAAGCCACATGCCCATT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAAGGTTCTGGACCTGTaGATGAACCTCCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGKVLDL*MNLHFV
Trigger: GACAAAATGGAGGTTCATTCACAGGTCCAGAACCTT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGAAGTGGGTATGTCCTaGCATGCAGATGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGEVGMS*HADVSN
Trigger: ATTGGAAACATCTGCATGTCAGGACATACCCACTTC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATGTGGTTTTGCTCAGTaGTCCTCCAGGATCAGCAAC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVCGFAQ*SSRISN
Trigger: GTTGCTGATCCTGGAGGATCACTGAGCAAAACCACA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATTTGAAAAAGAATCATaGGTTCCGGCTTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRFEKES*VPAFQE
Trigger: TTCCTGGAAAGCCGGAACTCATGATTCTTTTTCAAA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATATAGGGCAATCTCCTaGGATATAAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTYRAIS*DIREAQ
Trigger: TTGGGCTTCCCTTATATCTCAGGAGATTGCCCTATA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTTTCTCTGTGTTGGTaGTGGACTGTGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFSLCW*WTVLPE
Trigger: CTCAGGCAGCACAGTCCATCACCAACACAGAGAAAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGAGAGAAGAACTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILERRTA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAGTTCTTCTCTC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGATAAAATGCCCCGAATaGGCTGCTCATTTAAGATGG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMIKCPE*AAHLRW
Trigger: CCATCTTAAATGAGCAGCGCATTCGGGGCATTTTAT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGACCTTTTTGAAACTTaGCCTCAAGTCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTDLFET*PQVQRG
Trigger: TCCCCGCTGGACTTGAGGGCAAGTTTCAAAAAGGTC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTGTTACCAGGTGAACTaGCATCATGTTCACGTACAG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGCYQVN*HHVHVQ
Trigger: CTGTACGTGAACATGATGGCAGTTCACCTGGTAACA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGTTTGTTGCAATACTTaGACACTAAAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTVCCNT*TLKAPG
Trigger: CCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAAC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACACGTCTTTCTCCCGTATaGCAAATTTCATGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTRLSPV*QISCLV
Trigger: GACAAGGCATGAAATTTGGCATACGGGAGAAAGACG...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGCAATGGCATTGCTGTaGATGATCACCGATGAAAAC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTAMALL*MITDEN
Trigger: GTTTTCATCGGTGATCATGCACAGCAATGCCATTGC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTAAAAGGCTCTGTGGTTaGTGCTGGTCATGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTKRLCG*CWSWQQ
Trigger: TTGCTGCCATGACCAGCAGCAACCACAGAGCCTTTT...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGCTTTTGGGTCTGCTTaGAAACCTACCCACTTTATC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVAFGSA*KPTHFI
Trigger: GATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTCACAGAGTTCACACTaGAGCTTGGGCATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSQSSH*SLGISL
Trigger: TAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGACCGTCCGCAGGTCTTaGACTGGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRTVRRS*TGMASP
Trigger: GGGAGAAGCCATACCAGTGCAAGACCTGCGGACGGT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTCAAGCCCAGGTGGATaGGTTCATGTTTCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSSPGG*VHVSVS
Trigger: ACTTACAGAAACATGAACGCATCCACCTGGGCTTGA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGAGGGGTCTAGATGTCTaGAAATATGAAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMRGLDV*KYEDRA
Trigger: TGCTCTGTCTTCATATTTGCAGACATCTAGACCCCT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGGCCCGGAAAGCCTTCTaGAGAACAGCCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRARKAF*RTASME
Trigger: CTCCATGCTGGCTGTTCTGCAGAAGGCTTTCCGGGC...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGTGGTATATTTTCTGTaGCTGAATCCGAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMVVYFL*LNPNPV
Trigger: CACAGGATTCGGATTCAGCCACAGAAAATATACCAC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAGTGAGAACAGCAGCTaGTTGTGGACTTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSENSS*LWTSFL
Trigger: CAAGAAAGAAGTCCACAACCAGCTGCTGTTCTCACT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACATGTGGTCCGTGTCTaGCAAAGTACTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVHVVRV*QSTSGT
Trigger: AGTACCGGAAGTACTTTGCCAGACACGGACCACATG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAACAAATTTAACCATGTaGTCCGTGTCTGGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRTNLTM*SVSGKV
Trigger: TACTTTGCCAGACACGGACCACATGGTTAAATTTGT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTCCAATGGGATGGCTaGACTGTTGGTCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFQWDG*TVGQGV
Trigger: AACACCCTGACCAACAGTCCAGCCATCCCATTGGAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGTTGCTGCTGGTCATaGCAGCAATGGCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGCCWS*QQWHCC
Trigger: ACAGCAATGCCATTGCTGCCATGACCAGCAGCAACC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCCTACCCACTTTATCTaGCTCGGGCTTACTGTCATC +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHPTHFI*LGLTVI
Trigger: GATGACAGTAAGCCCGAGCCAGATAAAGTGGGTAGG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGAAGTAAGATGTCGGTaGGGCCTTCCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVEVRCR*GLPWFP
Trigger: TGGAAACCAAGGAAGGCCCCACCGACATCTTACTTC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGAGTGTGGAAGGGCTCTaGAACTGCTTGGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRSVEGL*NCLAQS
Trigger: GCTCTGCGCCAAGCAGTTCCAGAGCCCTTCCACACT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGGATTTGAGTTTTCGTaGCACACGTCACCTATTTTC +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMGFEFS*HTSPIF
Trigger: GAAAATAGGTGACGTGTGCCACGAAAACTCAAATCC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGCCCTTAAGTCTGTCTaGAATAGACCCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHALKSV*NRPPHP
Trigger: TGGATGTGGGGGTCTATTCCAGACAGACTTAAGGGC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTCACTTTCAAGTGCCTaGGAATTCACTACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSLSSA*EFTTAV
Trigger: CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTCACTTTCAAGTGCCTaGGAATTCACTACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSLSSA*EFTTAV
Trigger: CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTTCCCACGGATGAGTaGAGCAGAATGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFPTDE*SRMLPG
Trigger: TCCAGGAAGCATTCTGCTCCACTCATCCGTGGGAAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTAGTCGGAGACCTTTTTaGAACTTGCCCTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTSRRPF*NLPSSP
Trigger: TGGACTTGAGGGCAAGTTTCAAAAAGGTCTCCGACT...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCCCTGTGTTACCAGGTaGACTGCCATCATGTTCACG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLPCVTR*TAIMFT
Trigger: CGTGAACATGATGGCAGTTCACCTGGTAACACAGGG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATGTGGACTTCTTTCTTaGTTAACCTCTAAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRCGLLS*LTSKLD
Trigger: ATCCAACTTAGAGGTTAATCAAGAAAGAAGTCCACA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGAGATTTTGAACGAGTaGGAACAGCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHEILNE*EQQLVV
Trigger: CACAACCAGCTGCTGTTCTCACTCGTTCAAAATCTC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTTCTGGACCTGTGAATaGACCTCCATTTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGFWTCE*TSILSN
Trigger: ATTGGACAAAATGGAGGTTCATTCACAGGTCCAGAA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGTTCTTCTCCAGGAGTaGACATTTGCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHVLLQE*TFACLR
Trigger: CCGAAGACATGCAAATGTTCACTCCTGGAGAAGAAC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGTTCTTCTCCAGGAGTaGACATTTGCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVVLLQE*TFACLR
Trigger: CCGAAGACATGCAAATGTTCACTCCTGGAGAAGAAC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCAGAGCCACTGTAGCTaGTCACAGAGGCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALQSHCS*SQRRHS
Trigger: AGAATGCCGCCTCTGTGATCAGCTACAGTGGCTCTG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATCAGCAACATAGTTTaGCTCCTCCGGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGISNIV*LLRYFS
Trigger: GGAGAAATACCGGAGGAGTCAAACTATGTTGCTGAT...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTGTGGTTTTGCTCAGTaGTCCTCCAGGATCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCCGFAQ*SSRISN
Trigger: GTTGCTGATCCTGGAGGATCACTGAGCAAAACCACA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCCTTGTTGCAATACTaGCAGACGAACTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTALLQY*QTNSFK
Trigger: CTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGGC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACATATGCCTCTGCTCGTaGTTCCTTTTGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHICLCS*FLLVER
Trigger: TCTCTCCACCAAAAGGAATCACGAGCAGAGGCATAT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACACATCTTCAGGATATCTaGCCCTTATTTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTHLQDI*PLFSPV
Trigger: CACTGGAGAAAATAAGGGTCAGATATCCTGAAGATG...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGCCCATAGATAAGGCATaGCCTATGTTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMPIDKA*PMFSVN
Trigger: ATTCACAGAAAACATAGGTCATGCCTTATCTATGGG...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCCCTCTTTCATTCTCTaGGATGAGGCCATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHPSFIL*DEAIAK
Trigger: CTTTGCAATGGCCTCATCTCAGAGAATGAAAGAGGG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAGATGTCTGCAAATATaGAGACAGAGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGRCLQI*RQSIWL
Trigger: AAGCCAGATGCTCTGTCTTCATATTTGCAGACATCT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGACTGCAGGTCACGCTaGAACTGCATTCCGGATTCT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLDCRSR*NCIPDS
Trigger: AGAATCCGGAATGCAGTTTCAGCGTGACCTGCAGTC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGGCTTTGTCTGGTTGTaGGACCTTCTCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVGFVWL*DLLKVT
Trigger: AGTGACTTTGAGAAGGTCTCACAACCAGACAAAGCC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGACCTTTTTGAAACTTaGCCTCAAGTCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCDLFET*PQVQRG
Trigger: TCCCCGCTGGACTTGAGGGCAAGTTTCAAAAAGGTC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATGTTTTCGGTTTCGCTaGAAGGGCTTCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTCFRFR*KGFTIF
Trigger: GAAAATTGTGAAGCCCTTGCAGCGAAACCGAAAACA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTCACATAACTACGTTTaGACACAACGCAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMSHNYV*TQRNCR
Trigger: TCTACAGTTGCGTTGTGTGCAAACGTAGTTATGTGA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAGTATGCCAAATTTCATaGCTTGTCCTGTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGVCQIS*LVLYSA
Trigger: GGCTGAGTACAGGACAAGGCATGAAATTTGGCATAC...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGCGGCAGAGCAGGTTTTaGAATGTAGGTTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMRQSRF*NVGFNF
Trigger: AAAATTGAAACCTACATTGCAAAACCTGCTCTGCCG...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGGGCTCCTGTTTCCGTaGTCCTTCCTCCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALGLLFP*SFLQLT
Trigger: AGTCAACTGGAGGAAGGAGCACGGAAACAGGAGCCC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGGCGCAATCCAGTTCTaGTGGGTATTTACATTTATG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTGAIQF*WVFTFM
Trigger: CATAAATGTAAATACCCAGCAGAACTGGATTGCGCC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGTTTCCAGCCCCCACTaGTTTGTCTCCATCACAGAG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLVSSPH*FVSITE
Trigger: CTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAAC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTTTCTGTAAGTTTCCTTaGACCGAAAAGCACCGTCCG +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTFCKFP*TEKHRP
Trigger: CGGACGGTGCTTTTCGGTGCAAGGAAACTTACAGAA...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTGGTGGTTGGAAGACTaGAGAGAGTTTCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVWWLED*REFQNN
Trigger: ATTGTTCTGAAACTCTCTGCAGTCTTCCAACCACCA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATACTGCAGTGTACCTTaGACTAAATCTCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTYCSVP*TKSLGQ
Trigger: CTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCCTGGGCGTTTAAATaGTTTCTTACCCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSWAFK*FLTHPN
Trigger: ATTTGGGTGGGTAAGAAAGCATTTAAACGCCCAGGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTTCCAGCTCCAGGACGTaGCTGGAAATACAGATTGTA +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTSSSRT*LEIQIV
Trigger: TACAATCTGTATTTCCAGCCACGTCCTGGAGCTGGA...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATGCATTTGTGATCCTTaGCCCATTAGTGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVCICDP*PISDGW
Trigger: CCAGCCATCACTAATGGGCCAAGGATCACAAATGCA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACCGAATCCTGTGGTATaGAGAATGTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVPNPVV*RMSLAS
Trigger: GGAAGCCAAAGACATTCTCCATACCACAGGATTCGG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGATCTTCCCTGGAAAAATaGACATCTCCTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRSSLEK*TSPSLF
Trigger: AAACAATGAAGGAGATGTCCATTTTTCCAGGGAAGA...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCATGTTTCCAATGGGATaGCTGGACTGTTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCMFPMG*LDCWSG
Trigger: CCCTGACCAACAGTCCAGCCATCCCATTGGAAACAT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGCTGCATTTTGTACATTaGCAGAAGTGGGTATGTCCT +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGLHFVH*QKWVCP
Trigger: AGGACATACCCACTTCTGCCAATGTACAAAATGCAG...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCCTCCTCTCCCCATTTaGTACCCTCTGCATTTTGTA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHPPLPI*YPLHFV
Trigger: TACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCCTACCCACTTTATCTaGCTCGGGCTTACTGTCATC +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCPTHFI*LGLTVI
Trigger: GATGACAGTAAGCCCGAGCCAGATAAAGTGGGTAGG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGAGCTCGCAGGCATATaGCCGAGAAGTAAGATGTCG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLELAGI*PRSKMS
Trigger: CGACATCTTACTTCTCGGCCATATGCCTGCGAGCTC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATCCTTCAAGCCCAGGTaGATGCGTTCATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVSFKPR*MRSCFC
Trigger: ACAGAAACATGAACGCATCCACCTGGGCTTGAAGGA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACGTGATTCCTTTTGGTaGAGAGATACAAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRRDSFW*RDTKIS
Trigger: AGAGATTTTTGTATCTCTCCACCAAAAGGAATCACG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGGATTTGAGTTTTCGTaGCACACGTCACCTATTTTC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTGFEFS*HTSPIF
Trigger: GAAAATAGGTGACGTGTGCCACGAAAACTCAAATCC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTCCATGGCCTTGTGGTaGTTGGAAGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLSMALW*LEDCRE
Trigger: CTCTCTGCAGTCTTCCAACCACCACAAGGCCATGGA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCACATCCATGGCCTTGTaGTGGTTGGAAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCTSMAL*WLEDCR
Trigger: TCTGCAGTCTTCCAACCACCACAAGGCCATGGATGT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCAGTGGAATGGGAGATaGCAGGTTCCACTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALQWNGR*QVPLEP
Trigger: GGGCTCAAGTGGAACCTGCCATCTCCCATTCCACTG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTTTAAAATACAGGCTTaGAGCTGCCAGAACATTGCT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVFKIQA*SCQNIA
Trigger: AGCAATGTTCTGGCAGCTTCAAGCCTGTATTTTAAA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCCCTGTGTTACCAGGTaGACTGCCATCATGTTCACG +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRPCVTR*TAIMFT
Trigger: CGTGAACATGATGGCAGTTCACCTGGTAACACAGGG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTATATTTTCTGTGGCTaGATCCGAATCCTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVYIFCG*IRILWY
Trigger: ATACCACAGGATTCGGATTCAGCCACAGAAAATATA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAACCTGTTCAGGGTGGTaGATTGTTTGTTGCAATACT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGTCSGW*IVCCNT
Trigger: AGTATTGCAACAAACAATTCACCACCCTGAACAGGT...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAAGGTTCTGGACCTGTaGATGAACCTCCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVKVLDL*MNLHFV
Trigger: GACAAAATGGAGGTTCATTCACAGGTCCAGAACCTT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCTGATGGAAAGTCTATaGTCGATGGCATGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHLMESL*SMAWKD
Trigger: GTCTTTCCATGCCATCGATCATAGACTTTCCATCAG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGAAGTGGGTATGTCCTaGCATGCAGATGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTEVGMS*HADVSN
Trigger: ATTGGAAACATCTGCATGTCAGGACATACCCACTTC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGACTGACAGCTGGGTCTaGAAAGGCTCTGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILTDSWV*KGSVVA
Trigger: AGCAACCACAGAGCCTTTTCAGACCCAGCTGTCAGT...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACCTATTTTCTCCTGCTaGCTTGGGCTTTTGAATAAG +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGPIFSC*LGLLNK
Trigger: CTTATTCAAAAGCCCAAGTCAGCAGGAGAAAATAGG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGATGGCAGGTTCCACTTaGGCCCTTAAGTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILMAGST*ALKSVW
Trigger: CCAGACAGACTTAAGGGCTCAAGTGGAACCTGCCAT...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTTTGAAAAAGAATCATaGGTTCCGGCTTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGFEKES*VPAFQE
Trigger: TTCCTGGAAAGCCGGAACTCATGATTCTTTTTCAAA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACTCCAATGAACATGAATaGCTGCAGGTCACGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHSNEHE*LQVTLK
Trigger: TTTCAGCGTGACCTGCAGTCATTCATGTTCATTGGA...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTG +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGRVRFL*FGRNHL
Trigger: CAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGATTCGATGATGGAAAATaGATTTGTGATCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGFDDGK*ICDPWP
Trigger: GGGCCAAGGATCACAAATGCATTTTCCATCATCGAA...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACTGTTACCAGGTGAACTaGCATCATGTTCACGTACAG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHCYQVN*HHVHVQ
Trigger: CTGTACGTGAACATGATGGCAGTTCACCTGGTAACA...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGTTTGTTGCAATACTTaGACACTAAAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHVCCNT*TLKAPG
Trigger: CCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAAC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTCACATAACTACGTTTaGACACAACGCAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVSHNYV*TQRNCR
Trigger: TCTACAGTTGCGTTGTGTGCAAACGTAGTTATGTGA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCGTCTTTCTCCCGTATaGCAAATTTCATGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHRLSPV*QISCLV
Trigger: GACAAGGCATGAAATTTGGCATACGGGAGAAAGACG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACCATTTGGTACCCTCTaGATTTTGTACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGPFGTL*ILYIGR
Trigger: TCTGCCAATGTACAAAATGCAGAGGGTACCAAATGG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTTAGATCCTAGAATGTaGCTTTTCACAATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVLDPRM*LFTMAS
Trigger: CGAAGCCATTGTGAAAAGGCACATTCTAGGATCTAA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCTTCACTCATCTCCATaGACTCGGATTGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLLHSSP*TRIGKA
Trigger: GGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGAATCCTGGTCACTTaGGTCATCGAACACTTCACT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGILVT*VIEHFT
Trigger: AGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACACTCATTCAAGGTGAATaGCTTGTTGCAATACTGACA +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTLIQGE*LVAILT
Trigger: TGTCAGTATTGCAACAAGGCATTCACCTTGAATGAG...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTCAGTCCTCATTATTTaGAGATCTATTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMSVLII*RSIAPH
Trigger: ATGAGGAGCAATAGATCTGCAAATAATGAGGACTGA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACCACATGATAGAATATaGTGTAGGGCAATTAGATTT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRPHDRI*CRAIRF
Trigger: AAATCTAATTGCCCTACAGCATATTCTATCATGTGG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAAAGACATTGCCCAGTaGCTGGTACTCAATAAATGT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVKDIAQ*LVLNKC
Trigger: ACATTTATTGAGTACCAGGCACTGGGCAATGTCTTT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAGGGCAGTCACTAACTaGCATCCTAAAGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVRAVTN*HPKAAL
Trigger: TAATGCAGCTTTAGGATGGCAGTTAGTGACTGCCCT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGCTGCTCATTTAAGATaGAGAGTACCGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHAAHLR*RVPCHC
Trigger: ACAGTGACACGGTACTCTCCATCTTAAATGAGCAGC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAACAGCAGCTGGTTGTaGACTTCTTTCTTGATTAAC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTNSSWL*TSFLIN
Trigger: GTTAATCAAGAAAGAAGTCCACAACCAGCTGCTGTT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGTGTTTACAGTATCTTaGAAATTCAGCGTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRVFTVS*KFSVGN
Trigger: ATTACCAACGCTGAATTTCCAAGATACTGTAAACAC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAATCACCGATGAAAACTaGCTGCTGTGTACAATGACC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVITDEN*LLCTMT
Trigger: GGTCATTGTACACAGCAGCCAGTTTTCATCGGTGAT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCTCTGTGGTTGCTGCTaGTCATGGCAGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLCGCC*SWQQWH
Trigger: ATGCCATTGCTGCCATGACCAGCAGCAACCACAGAG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCAACATTACTATTTGTaGAGGTTCCCGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCQHYYL*RFPAEQ
Trigger: CTGCTCTGCCGGGAACCTCCACAAATAGTAATGTTG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGCCACGGTTTGTCAGTaGAATCCTGGTCACTTGCGT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALATVCQ*NPGHLR
Trigger: ACGCAAGTGACCAGGATTCCACTGACAAACCGTGGC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
3UTR CAA 72 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTaGAGCTACTTCTTCACAATGATAACCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSP*SYFFTMITFQS
Trigger: AGATTGGAAGGTTATCATTGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCCAGCTTTAACAGAGTaGGATTCCTGTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCPALTE*DSCALE
Trigger: TTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGATATATTTTCTGTGGCTaGATCCGAATCCTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGYIFCG*IRILWY
Trigger: ATACCACAGGATTCGGATTCAGCCACAGAAAATATA...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAGCAGACTCATTCATTTaGCTGTTTTCTCGTGCATTT +
Preference number: 4 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGADSFI*LFSRAF
Trigger: AAATGCACGAGAAAACAGTCAAATGAATGAGTCTGC...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGGTGCATGATCACCGATaGAAACTGGCTGCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRVHDHR*KLAAVY
Trigger: GTACACAGCAGCCAGTTTTCATCGGTGATCATGCAC...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGTGGCATTGCTGTGCATaGTCACCGATGAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILWHCCA*SPMKTG
Trigger: GCCAGTTTTCATCGGTGATCATGCACAGCAATGCCA...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTGGCATTGCTGTGCATaGTCACCGATGAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALWHCCA*SPMKTG
Trigger: GCCAGTTTTCATCGGTGATCATGCACAGCAATGCCA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTAATCTCATGTGCATTTTaGGTGTGGAAGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HIRAGRETSLQVILYLGLISCAF*VWKGSG
Trigger: TCCAGAGCCCTTCCACACTCAAAATGCACATGAGAT...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTATATGCCTCTGCTCGTaGTTCCTTTTGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLICLCS*FLLVER
Trigger: TCTCTCCACCAAAAGGAATCACGAGCAGAGGCATAT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAATTTCACTCCTTCATaGCTGTCACATGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTNFTPS*LSHGQN
Trigger: ATTTTGTCCATGTGACAGTCATGAAGGAGTGAAATT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTTTCATTCTCTGAGATaGGGCCATTGCAAAGTAATA +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGFHSLR*GHCKVI
Trigger: TATTACTTTGCAATGGCCTCATCTCAGAGAATGAAA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCCCTCTTTCATTCTCTaGGATGAGGCCATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLPSFIL*DEAIAK
Trigger: CTTTGCAATGGCCTCATCTCAGAGAATGAAAGAGGG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCTATTCTGGCAGTTTaGAAAAGAATCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSILAV*KRIMSS
Trigger: GGAACTCATGATTCTTTTTCAAACTGCCAGAATAGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTCCAATGAACATGAATaGCTGCAGGTCACGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCSNEHE*LQVTLK
Trigger: TTTCAGCGTGACCTGCAGTCATTCATGTTCATTGGA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGATGCAAATACTTTGTTaGAGTAATGGCAAGGATATG +
Preference number: 4 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMMQILC*SNGKDM
Trigger: CATATCCTTGCCATTACTGCAACAAAGTATTTGCAT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCCATTTGGTACCCTCTaGATTTTGTACATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHPFGTL*ILYIGR
Trigger: TCTGCCAATGTACAAAATGCAGAGGGTACCAAATGG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCTTCACTCATCTCCATaGACTCGGATTGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALLHSSP*TRIGKA
Trigger: GGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCAGTCCTCATTATTTaGAGATCTATTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSVLII*RSIAPH
Trigger: ATGAGGAGCAATAGATCTGCAAATAATGAGGACTGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACTGGGAATTCACTACTaGAGTGTACCTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVLGIHY*SVPCTK
Trigger: TTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTCTGTACTTGTGGGCTaGATAATCTCCAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCSVLVG*IISNKA
Trigger: AGCCTTGTTGGAGATTATGCAGCCCACAAGTACAGA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGAATCTGGTTTGGATTaGCCTTCCAATACAAAATTG +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTESGLD*PSNTKL
Trigger: CAATTTTGTATTGGAAGGGCAATCCAAACCAGATTC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGCCAGAACATTGCTATaGGCTTTAAATTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTARTLL*ALNLVS
Trigger: AGATACCAAATTTAAAGCCCATAGCAATGTTCTGGC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTACCGAATCCTGTGGTATaGAGAATGTCTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HIRAGRETSLQVILYLGLPNPVV*RMSLAS
Trigger: GGAAGCCAAAGACATTCTCCATACCACAGGATTCGG...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAGTGAGAACAGCAGCTaGTTGTGGACTTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCSENSS*LWTSFL
Trigger: CAAGAAAGAAGTCCACAACCAGCTGCTGTTCTCACT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTTGCTGTCAAAGGCTTTaGAACAGCAGCTACAATTGT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTCCQRL*NSSYNC
Trigger: ACAATTGTAGCTGCTGTTCCAAAGCCTTTGACAGCA...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTTTCTAAAAAGCGTTaGTTTCCTCCAGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFSKKR*FPPGMG
Trigger: GCCCATTCCTGGAGGAAACCAACGCTTTTTAGAAAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTTCCAATGGGATGGCTaGACTGTTGGTCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRFQWDG*TVGQGV
Trigger: AACACCCTGACCAACAGTCCAGCCATCCCATTGGAA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCTGCATTTTGTACATTaGCAGAAGTGGGTATGTCCT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHLHFVH*QKWVCP
Trigger: AGGACATACCCACTTCTGCCAATGTACAAAATGCAG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCATCACCGATGAAAACTaGCTGCTGTGTACAATGACC +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCITDEN*LLCTMT
Trigger: GGTCATTGTACACAGCAGCCAGTTTTCATCGGTGAT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGGGTATTTACATTTATaGCTCGGGCTCCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLGYLHL*LGLLFP
Trigger: CGGAAACAGGAGCCCGAGCCATAAATGTAAATACCC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGTATGGATTCTTTCATaGATTTTGAGGGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVVWILS*ILRVSF
Trigger: GAATGAGACCCTCAAAATCCATGAAAGAATCCATAC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGTATGGATTCTTTCATaGATTTTGAGGGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGVWILS*ILRVSF
Trigger: GAATGAGACCCTCAAAATCCATGAAAGAATCCATAC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGACATCCATGGCCTTGTaGTGGTTGGAAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILTSMAL*WLEDCR
Trigger: TCTGCAGTCTTCCAACCACCACAAGGCCATGGATGT...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGTGGACAGTCCTTCAGTaGAATGGGAGATGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILWTVLQ*NGRWQV
Trigger: AACCTGCCATCTCCCATTCCACTGAAGGACTGTCCA...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTACCAGCTTTAACAGAGTaGGATTCCTGTGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HIRAGRETSLQVILYLGLPALTE*DSCALE
Trigger: TTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGG...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGAGTCGGAGACCTTTTTaGAACTTGCCCTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRSRRPF*NLPSSP
Trigger: TGGACTTGAGGGCAAGTTTCAAAAAGGTCTCCGACT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGGAACATCAGAAGATTaGTTTTCATCTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHGTSED*FSSSLE
Trigger: TTCCAGGGAAGATGAAAATCAATCTTCTGATGTTCC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCACCTGTTCAGGGTGGTaGATTGTTTGTTGCAATACT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCTCSGW*IVCCNT
Trigger: AGTATTGCAACAAACAATTCACCACCCTGAACAGGT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTATGCCCCGAATGCGCTaGTCATTTAAGATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALMPRMR*SFKMES
Trigger: ACTCTCCATCTTAAATGAGCAGCGCATTCGGGGCAT...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATTTCAAGACAGAAAATaGACTGATATCGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTFQDRK*TDIVFL
Trigger: GAGAAAGACGATATCAGTGCATTTTCTGTCTTGAAA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTTTCAAGACAGAAAATaGACTGATATCGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGFQDRK*TDIVFL
Trigger: GAGAAAGACGATATCAGTGCATTTTCTGTCTTGAAA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGCTTTTGGGTCTGCTTaGAAACCTACCCACTTTATC +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLAFGSA*KPTHFI
Trigger: GATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACATTGCAAAGTAATATaGAGCACAGGTAATCACAGG +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVHCKVI*STGNHR
Trigger: CCTGTGATTACCTGTGCTGCATATTACTTTGCAATG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCCACATGATAGAATATaGTGTAGGGCAATTAGATTT +
Preference number: 4 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVPHDRI*CRAIRF
Trigger: AAATCTAATTGCCCTACAGCATATTCTATCATGTGG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCCCACTGGGACAAACTaGAGGCATTTGCAAGATAGT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALPTGTN*RHLQDS
Trigger: ACTATCTTGCAAATGCCTGCAGTTTGTCCCAGTGGG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTGCATTTGTGATCCTTaGCCCATTAGTGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALCICDP*PISDGW
Trigger: CCAGCCATCACTAATGGGCCAAGGATCACAAATGCA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTATGGAGAATGTCTTTaGCTTCCGGCATGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLYGECL*LPACFR
Trigger: CCGAAAACATGCCGGAAGCCAAAGACATTCTCCATA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTTTTCTAAAAAGCGTTaGTTTCCTCCAGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCFSKKR*FPPGMG
Trigger: GCCCATTCCTGGAGGAAACCAACGCTTTTTAGAAAA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGATTTTCACTGTTATTTaGCAAAGGGGTGCAACATTA +
Preference number: 4 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGIFTVI*QRGATL
Trigger: TAATGTTGCACCCCTTTGCCAAATAACAGTGAAAAT...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTTGTCAGTGGAATCCTaGTCACTTGCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALLSVES*SLASSN
Trigger: GTTCGATGACGCAAGTGACCAGGATTCCACTGACAA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAATCCAGTTCTGCTaGGTATTTACATTTATGGCT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTAIQFC*VFTFMA
Trigger: AGCCATAAATGTAAATACCCAGCAGAACTGGATTGC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTCCTTCAAGCCCAGGTaGATGCGTTCATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRSFKPR*MRSCFC
Trigger: ACAGAAACATGAACGCATCCACCTGGGCTTGAAGGA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCTTTCACAAGAAACTTaGGATATTGGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCLSQET*DIGGVS
Trigger: GCTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATCTCTACAGGGGATATaGACAGTTAAAAGTTATAGT +
Preference number: 4 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSLQGI*TVKSYS
Trigger: ACTATAACTTTTAACTGTCCATATCCCCTGTAGAGA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTTTAAAATACAGGCTTaGAGCTGCCAGAACATTGCT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCFKIQA*SCQNIA
Trigger: AGCAATGTTCTGGCAGCTTCAAGCCTGTATTTTAAA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGAACATCAGAAGATTaGTTTTCATCTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGTSED*FSSSLE
Trigger: TTCCAGGGAAGATGAAAATCAATCTTCTGATGTTCC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTTCTGGACCTGTGAATaGACCTCCATTTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLFWTCE*TSILSN
Trigger: ATTGGACAAAATGGAGGTTCATTCACAGGTCCAGAA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTAGACAGAAAATGCACTaGTATCGTCTTTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLRQKMH*YRLSPV
Trigger: TACGGGAGAAAGACGATATCAGTGCATTTTCTGTCT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGATCAGCAACATAGTTTaGCTCCTCCGGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRISNIV*LLRYFS
Trigger: GGAGAAATACCGGAGGAGTCAAACTATGTTGCTGAT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGTGCACAAATTTTACTaGTTTTATAGGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTVHKFY*FYRAIS
Trigger: GGAGATTGCCCTATAAAATCAGTAAAATTTGTGCAC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCRVRFL*FGRNHL
Trigger: CAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGTATGCCAAATTTCATaGCTTGTCCTGTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALVCQIS*LVLYSA
Trigger: GGCTGAGTACAGGACAAGGCATGAAATTTGGCATAC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTAGGCGGCATTCTCACTaGTATTACTCAAAGATAAAA +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTRRHSH*YYSKIK
Trigger: TTTTATCTTTGAGTAATAGCAGTGAGAATGCCGCCT...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGCAATGGCATTGCTGTaGATGATCACCGATGAAAAC +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILAMALL*MITDEN
Trigger: GTTTTCATCGGTGATCATGCACAGCAATGCCATTGC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTCAAGCCCAGGTGGATaGGTTCATGTTTCTGTAAGT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALSSPGG*VHVSVS
Trigger: ACTTACAGAAACATGAACGCATCCACCTGGGCTTGA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCTCATTCAAGGTGAATaGCTTGTTGCAATACTGACA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCLIQGE*LVAILT
Trigger: TGTCAGTATTGCAACAAGGCATTCACCTTGAATGAG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTCCTGGGCGTTTAAATaGTTTCTTACCCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLSWAFK*FLTHPN
Trigger: ATTTGGGTGGGTAAGAAAGCATTTAAACGCCCAGGA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGCTGCTCATTTAAGATaGAGAGTACCGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALAAHLR*RVPCHC
Trigger: ACAGTGACACGGTACTCTCCATCTTAAATGAGCAGC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAAGTACTTCCGGTACTaGAAAATTCACCAATCCTAT +
Preference number: 4 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVKYFRY*KIHQSY
Trigger: ATAGGATTGGTGAATTTTCCAGTACCGGAAGTACTT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCACAAATTTAACCATGTaGTCCGTGTCTGGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCTNLTM*SVSGKV
Trigger: TACTTTGCCAGACACGGACCACATGGTTAAATTTGT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTAAAGTCTATGATCGATaGCATGGAAAGACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTKVYDR*HGKTSD
Trigger: ATCAGAAGTCTTTCCATGCCATCGATCATAGACTTT...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAATAAGTGTTTCTTTTaGTGCATTCCAAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCNKCFF*CIPRAA
Trigger: TGCTGCCCTTGGAATGCACCAAAAGAAACACTTATT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACAGAAACTTGGGATATTaGAGGAGTCAGCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHRNLGY*RSQLFC
Trigger: ACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCTTTCACAAGAAACTTaGGATATTGGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLLSQET*DIGGVS
Trigger: GCTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACACTAAGTCTTCTTCATaGAGACATCACACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHTKSSS*RHHTCR
Trigger: TCTACAAGTGTGATGTCTCCATGAAGAAGACTTAGT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAATGAGGTCGAATTCTaGTGCGTGTGTGTTAATGAA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCNEVEF*CVCVNE
Trigger: TTCATTAACACACACGCACCAGAATTCGACCTCATT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTAGACAGAAAATGCACTaGTATCGTCTTTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALRQKMH*YRLSPV
Trigger: TACGGGAGAAAGACGATATCAGTGCATTTTCTGTCT...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCCTATTTTCTCCTGCTaGCTTGGGCTTTTGAATAAG +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALPIFSC*LGLLNK
Trigger: CTTATTCAAAAGCCCAAGTCAGCAGGAGAAAATAGG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGAACCAATGAAATGTTaGTTCTCCAAGGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLEPMKC*FSKGFE
Trigger: CTCAAATCCCTTGGAGAATCAACATTTCATTGGTTC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAATTTCACTCCTTCATaGCTGTCACATGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCNFTPS*LSHGQN
Trigger: ATTTTGTCCATGTGACAGTCATGAAGGAGTGAAATT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGCCTTATTTTCTCCAGTaGCTAAAGACAGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILPYFLQ*LKTVQQ
Trigger: CTGCTGAACTGTCTTTAGTCACTGGAGAAAATAAGG...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCATCTTCAGGATATCTaGCCCTTATTTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALHLQDI*PLFSPV
Trigger: CACTGGAGAAAATAAGGGTCAGATATCCTGAAGATG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTAGATGTCTGCAAATATaGAGACAGAGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALRCLQI*RQSIWL
Trigger: AAGCCAGATGCTCTGTCTTCATATTTGCAGACATCT...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTTTTCTCTACAGTGTTaGGAAGGAACAAAAACATGG +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCFSLQC*EGTKTW
Trigger: CCATGTTTTTGTTCCTTCTCAACACTGTAGAGAAAA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTGTTTTCGGTTTCGCTaGAAGGGCTTCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALCFRFR*KGFTIF
Trigger: GAAAATTGTGAAGCCCTTGCAGCGAAACCGAAAACA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACATGCAAATACTTTGTTaGAGTAATGGCAAGGATATG +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHMQILC*SNGKDM
Trigger: CATATCCTTGCCATTACTGCAACAAAGTATTTGCAT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCGGCAGAGCAGGTTTTaGAATGTAGGTTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLRQSRF*NVGFNF
Trigger: AAAATTGAAACCTACATTGCAAAACCTGCTCTGCCG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGGCGCAATCCAGTTCTaGTGGGTATTTACATTTATG +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILGAIQF*WVFTFM
Trigger: CATAAATGTAAATACCCAGCAGAACTGGATTGCGCC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTGGTGGTTGGAAGACTaGAGAGAGTTTCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRWWLED*REFQNN
Trigger: ATTGTTCTGAAACTCTCTGCAGTCTTCCAACCACCA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCTGGGAATTCACTACTaGAGTGTACCTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALLGIHY*SVPCTK
Trigger: TTTAGTGCAAGGTACACTGCAGTAGTGAATTCCCAG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGAGGGGTCTAGATGTCTaGAAATATGAAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRRGLDV*KYEDRA
Trigger: TGCTCTGTCTTCATATTTGCAGACATCTAGACCCCT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGTGGTATATTTTCTGTaGCTGAATCCGAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILVVYFL*LNPNPV
Trigger: CACAGGATTCGGATTCAGCCACAGAAAATATACCAC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTAACAGCAGCTGGTTGTaGACTTCTTTCTTGATTAAC +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLNSSWL*TSFLIN
Trigger: GTTAATCAAGAAAGAAGTCCACAACCAGCTGCTGTT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAAAGTCTATGATCGATaGCATGGAAAGACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCKVYDR*HGKTSD
Trigger: ATCAGAAGTCTTTCCATGCCATCGATCATAGACTTT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGTGTTTACAGTATCTTaGAAATTCAGCGTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTVFTVS*KFSVGN
Trigger: ATTACCAACGCTGAATTTCCAAGATACTGTAAACAC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTAGCAATCCAGTTCTGCTaGGTATTTACATTTATGGCT +
Preference number: 4 (lower is better)
Translates to: HIRAGRETSLQVILYLGLAIQFC*VFTFMA
Trigger: AGCCATAAATGTAAATACCCAGCAGAACTGGATTGC...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACTCTCTACAGGGGATATaGACAGTTAAAAGTTATAGT +
Preference number: 4 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHSLQGI*TVKSYS
Trigger: ACTATAACTTTTAACTGTCCATATCCCCTGTAGAGA...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCTCTCCCTTCTATTCTaGCAGTTTGAAAAAGAATCA +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCLSLLF*QFEKES
Trigger: TGATTCTTTTTCAAACTGCCAGAATAGAAGGGAGAG...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAATCATGTCCTTTCCTaGGCGTTTAAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCNHVLS*AFKCFL
Trigger: AAGAAAGCATTTAAACGCCCAGGAAAGGACATGATT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTGTGGACTTCTTTCTTaGTTAACCTCTAAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLCGLLS*LTSKLD
Trigger: ATCCAACTTAGAGGTTAATCAAGAAAGAAGTCCACA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGCAGACTCATTCATTTaGCTGTTTTCTCGTGCATTT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALADSFI*LFSRAF
Trigger: AAATGCACGAGAAAACAGTCAAATGAATGAGTCTGC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGAACCAATGAAATGTTaGTTCTCCAAGGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILEPMKC*FSKGFE
Trigger: CTCAAATCCCTTGGAGAATCAACATTTCATTGGTTC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCCCATAGATAAGGCATaGCCTATGTTTTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALPIDKA*PMFSVN
Trigger: ATTCACAGAAAACATAGGTCATGCCTTATCTATGGG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTGTGACTCACACAGATaGAATAGCTGCACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRCDSHR*NSCTKE
Trigger: TTCTTTTGTGCAGCTATTTCATCTGTGTGAGTCACA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTTAGATCCTAGAATGTaGCTTTTCACAATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLDPRM*LFTMAS
Trigger: CGAAGCCATTGTGAAAAGGCACATTCTAGGATCTAA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR GCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCATTGCAAAGTAATATaGAGCACAGGTAATCACAGG +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRHCKVI*STGNHR
Trigger: CCTGTGATTACCTGTGCTGCATATTACTTTGCAATG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCGTGATTCCTTTTGGTaGAGAGATACAAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLRDSFW*RDTKIS
Trigger: AGAGATTTTTGTATCTCTCCACCAAAAGGAATCACG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGAATAAGTGTTTCTTTTaGTGCATTCCAAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRNKCFF*CIPRAA
Trigger: TGCTGCCCTTGGAATGCACCAAAAGAAACACTTATT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTAGAAACTTGGGATATTaGAGGAGTCAGCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLRNLGY*RSQLFC
Trigger: ACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCTCTCCCTTCTATTCTaGCAGTTTGAAAAAGAATCA +
Preference number: 4 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLLSLLF*QFEKES
Trigger: TGATTCTTTTTCAAACTGCCAGAATAGAAGGGAGAG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTAACATTGCCCAGTGCCTaGTACTCAATAAATGTAATT +
Preference number: 4 (lower is better)
Translates to: HIRAGRETSLQVILYLGLTLPSA*YSINVI
Trigger: AATTACATTTATTGAGTACCAGGCACTGGGCAATGT...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR CAA 72 bp TGCGTGTGTGTTAATGAAATAGCCTATGTAAAGACATaGCCCAGTGCCTGGTACTCAATAAATGTAATTTGT +
Preference number: 4 (lower is better)
Translates to: CVCVNEIAYVKT*PSAWYSINVIC
Trigger: ACAAATTACATTTATTGAGTACCAGGCACTGGGCAATGTCTTTACATAGGCTATTTCATTAACACACACGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTTTCATTCTCTGAGATaGGGCCATTGCAAAGTAATA +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALFHSLR*GHCKVI
Trigger: TATTACTTTGCAATGGCCTCATCTCAGAGAATGAAA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR TCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTCTATTCTGGCAGTTTaGAAAAGAATCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALSILAV*KRIMSS
Trigger: GGAACTCATGATTCTTTTTCAAACTGCCAGAATAGA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGCCAGAACATTGCTATaGGCTTTAAATTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILARTLL*ALNLVS
Trigger: AGATACCAAATTTAAAGCCCATAGCAATGTTCTGGC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTCTTCCCTGGAAAAATaGACATCTCCTTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALSSLEK*TSPSLF
Trigger: AAACAATGAAGGAGATGTCCATTTTTCCAGGGAAGA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTAAGTACTTCCGGTACTaGAAAATTCACCAATCCTAT +
Preference number: 4 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALKYFRY*KIHQSY
Trigger: ATAGGATTGGTGAATTTTCCAGTACCGGAAGTACTT...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGACTAAGTCTTCTTCATaGAGACATCACACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LHQSSLFADLLLLIILYRTKSSS*RHHTCR
Trigger: TCTACAAGTGTGATGTCTCCATGAAGAAGACTTAGT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CCA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGAATCATGTCCTTTCCTaGGCGTTTAAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGLSKTLNHQKTSISFILNHVLS*AFKCFL
Trigger: AAGAAAGCATTTAAACGCCCAGGAAAGGACATGATT...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
3UTR CAA 72 bp GCAGATAACAGTTATCAAATTTTTGGTGAATCTGGTTaGGATTGCCCTTCCAATACAAAATTGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: ADNSYQIFGESG*DCPSNTKLMLL
Trigger: CAGTAGCATCAATTTTGTATTGGAAGGGCAATCCAAACCAGATTCACCAAAAATTTGATAACTGTTATCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS GCA 90 bp GGCTCGGCTCCTTCGCCGCCGGCGCGTTTCCCCGGGGGTCCATGGTaGTTCCGGACCCGTGAGTCCGGCCGCAGCGCTGCACAGCACCGC +
Preference number: 5 (lower is better)
Translates to: GSAPSPPARFPGGPW*FRTRESGRSAAQHR
Trigger: GCGGTGCTGTGCAGCGCTGCGGCCGGACTCACGGGTCCGGAAGCACCATGGACCCCCGGGGAAACGCGCCGGCGGCGAAGGAGCCGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510338.5
CDS CCA 90 bp CCCCAACTAGTTTCCTGGCTTCAGAGGGAGGCCAGTGGCCGGGCGTaGGTGACGTCAGGGCCAGGCCTGAGTCATCGCCAGCAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PQLVSWLQREASGRA*VTSGPGLSHRQQPG
Trigger: CCCGGGCTGCTGGCGATGACTCAGGCCTGGCCCTGACGTCACCCACGCCCGGCCACTGGCCTCCCTCTGAAGCCAGGAAACTAGTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512276.5
ENST00000513619.5
CDS TCA 90 bp CGGGCCGGGCTGCCCTGCCACTCGGAAGGGGACAAAAGGAACCTTTaGTGTCCAGAGGCCCTCCTCTCAGCACACTCGCCGGCACAGACC +
Preference number: 5 (lower is better)
Translates to: RAGLPCHSEGDKRNL*CPEALLSAHSPAQT
Trigger: GGTCTGTGCCGGCGAGTGTGCTGAGAGGAGGGCCTCTGGACATCAAAGGTTCCTTTTGTCCCCTTCCGAGTGGCAGGGCAGCCCGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512276.5
ENST00000513619.5
CDS CCA 90 bp GAGTGCCACTCCCCAACTAGTTTCCTGGCTTCAGAGGGAGGCCAGTaGCCGGGCGTGGGTGACGTCAGGGCCAGGCCTGAGTCATCGCCA +
Preference number: 5 (lower is better)
Translates to: ECHSPTSFLASEGGQ*PGVGDVRARPESSP
Trigger: TGGCGATGACTCAGGCCTGGCCCTGACGTCACCCACGCCCGGCCACTGGCCTCCCTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512276.5
ENST00000513619.5
CDS CCA 90 bp TTGAGATTTGCTGCAGCTGCGAGTGCCACTCCCCAACTAGTTTCCTaGCTTCAGAGGGAGGCCAGTGGCCGGGCGTGGGTGACGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LRFAAAASATPQLVS*LQREASGRAWVTSG
Trigger: CCCTGACGTCACCCACGCCCGGCCACTGGCCTCCCTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS GCA 90 bp AAGCTTCAGCTACGGAAGAAACAGCGTATGAGTGCTCGGCAAGTGTaGGGACAGGCTCTGCCTCGTGGCAGACGTCCGTCCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KLQLRKKQRMSARQV*GQALPRGRRPSSPG
Trigger: GCCTGGAGAGGACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTCATACGCTGTTTCTTCCGTAGCTGAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp ACAGCGTATGAGTGCTCGGCAAGTGTGCGGACAGGCTCTGCCTCGTaGCAGACGTCCGTCCTCTCCAGGCAAAGGCTAGCTGTTCTCATG +
Preference number: 5 (lower is better)
Translates to: TAYECSASVRTGSAS*QTSVLSRQRLAVLM
Trigger: CATGAGAACAGCTAGCCTTTGCCTGGAGAGGACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTCATACGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TCTCCATGCACTCGGATTGGCAAAGCCCGAGTGGGCTGTCTCCACTaGGTTCTGGGTCATTCCCCTGTGGCAAAGGCTCCTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SPCTRIGKARVGCLH*VLGHSPVAKAPPAS
Trigger: AGATGCAGGAGGAGCCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GCACTGGGGGAAGAGAGTCTCCAAGGGCAGAGCTGGCTTCTGGTGTaGACCTCCTCCATGATGGAGGCAAGAGTCTCCATGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: ALGEESLQGQSWLLV*TSSMMEARVSMSPA
Trigger: AGCAGGAGACATGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTTGGAGACTCTCTTCCCCCAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510726.1
CDS GCA 90 bp CTAATCCTGCCTGCCATCTTAGGCTCGCAGAAGCAAGATACGCACTaGATGCAGCACACGAGCACTGGGGAAGGAGGAGGCAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: LILPAILGSQKQDTH*MQHTSTGEGGGKGQ
Trigger: CTGTCCCTTGCCTCCTCCTTCCCCAGTGCTCGTGTGCTGCATGCAGTGCGTATCTTGCTTCTGCGAGCCTAAGATGGCAGGCAGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS CCA 90 bp AAGCCCGAGTGGGCTGTCTCCACTGGGTTCTGGGTCATTCCCCTGTaGCAAAGGCTCCTCCTGCATCTGATACTTGGGTCTTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: KPEWAVSTGFWVIPL*QRLLLHLILGSSPS
Trigger: AGAGGGAGAAGACCCAAGTATCAGATGCAGGAGGAGCCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp GCACTCGGATTGGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTCTaGGTCATTCCCCTGTGGCAAAGGCTCCTCCTGCATCTGATACTT +
Preference number: 5 (lower is better)
Translates to: ALGLAKPEWAVSTGF*VIPLWQRLLLHLIL
Trigger: AAGTATCAGATGCAGGAGGAGCCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp TTGGCGCAGAGCTCGCAGGCATATGGCCGAGAAGTAAGATGTCGGTaGGGCCTTCCTTGGTTTCCAGCCCCCACTGCTTTGTCTCCATCA +
Preference number: 5 (lower is better)
Translates to: LAQSSQAYGREVRCR*GLPWFPAPTALSPS
Trigger: TGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCTCGGCCATATGCCTGCGAGCTCTGCGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp AGGGTGCAGCATGAGACTGGTGAGTGTGAAGCTTCAGGGGAGCACTaGGGGAAGAGAGTCTCCAAGGGCAGAGCTGGCTTCTGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RVQHETGECEASGEH*GKRVSKGRAGFWCE
Trigger: TTCACACCAGAAGCCAGCTCTGCCCTTGGAGACTCTCTTCCCCCAGTGCTCCCCTGAAGCTTCACACTCACCAGTCTCATGCTGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510726.1
ENST00000636289.1
CDS GCA 90 bp GTGATAATGCAGTCCCCAGGGATTATGGGGCTCATGCTAGGGACCTaGCGGTCAGGGTGCAGCATGAGACTGGTGAGTGTGAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VIMQSPGIMGLMLGT*RSGCSMRLVSVKLQ
Trigger: CTGAAGCTTCACACTCACCAGTCTCATGCTGCACCCTGACCGGCAGGTCCCTAGCATGAGCCCCATAATCCCTGGGGACTGCATTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510726.1
ENST00000636289.1
CDS GCA 90 bp GGGCGGTTGTGTTGTATGTTGTACCAACAGAGCAGACCTTACTACTaGAGAAGTAGGCGGCTGAGACTGCAAACCCCTGGGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRLCCMLYQQSRPYY*RSRRLRLQTPGGRS
Trigger: GGACCTGCCCCCAGGGGTTTGCAGTCTCAGCCGCCTACTTCTGCAGTAGTAAGGTCTGCTCTGTTGGTACAACATACAACACAACCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS CCA 90 bp GAACACTTCACTCATCTCCATGCACTCGGATTGGCAAAGCCCGAGTaGGCTGTCTCCACTGGGTTCTGGGTCATTCCCCTGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: EHFTHLHALGLAKPE*AVSTGFWVIPLWQR
Trigger: CCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp TACAGGCTGACTTCTGTAAGCTTCAGCTACGGAAGAAACAGCGTATaGGTGCTCGGCAAGTGTGCGGACAGGCTCTGCCTCGTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: YRLTSVSFSYGRNSV*VLGKCADRLCLVAD
Trigger: GTCTGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTCATACGCTGTTTCTTCCGTAGCTGAAGCTTACAGAAGTCAGCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp GCACTGGGGGAAGAGAGTCTCCAAGGGCAGAGCTGGCTTCTGGTGTaGACCTCCTCCATGATGGAGGCAAGAGTCTCCTCAGTTAGAACA +
Preference number: 5 (lower is better)
Translates to: ALGEESLQGQSWLLV*TSSMMEARVSSVRT
Trigger: TGTTCTAACTGAGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTTGGAGACTCTCTTCCCCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS CCA 90 bp TCGCAGGCATATGGCCGAGAAGTAAGATGTCGGTGGGGCCTTCCTTaGTTTCCAGCCCCCACTGCTTTGTCTCCATCACAGAGTTCACAC +
Preference number: 5 (lower is better)
Translates to: SQAYGREVRCRWGLP*FPAPTALSPSQSSH
Trigger: GTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCTCGGCCATATGCCTGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GCTGCTGGTCATGGCAGCAATGGCATTGCTGTGCATGATCACCGATaGAAACTGGCTGCTGTGTACAATGACCGAGGGTGCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: AAGHGSNGIAVHDHR*KLAAVYNDRGCRAT
Trigger: AGTGGCTCTGCACCCTCGGTCATTGTACACAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGCTGCCATGACCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp TGGAATCCTGGTCACTTGCGTCATCGAACACTTCACTCATCTCCATaGACTCGGATTGGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTT +
Preference number: 5 (lower is better)
Translates to: WNPGHLRHRTLHSSP*TRIGKARVGCLHWV
Trigger: AACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp AGAAGTAAGATGTCGGTGGGGCCTTCCTTGGTTTCCAGCCCCCACTaGTTTGTCTCCATCACAGAGTTCACACTGCAGCTTGGGCATCTC +
Preference number: 5 (lower is better)
Translates to: RSKMSVGPSLVSSPH*FVSITEFTLQLGHL
Trigger: GAGATGCCCAAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp CTAGACACAGCATGCACACACAGCACAAGCACGGCTAATCCTGCCTaGCATCTTAGGCTCGCAGAAGCAAGATACGCACTGCATGCAGCA +
Preference number: 5 (lower is better)
Translates to: LDTACTHSTSTANPA*HLRLAEARYALHAA
Trigger: TGCTGCATGCAGTGCGTATCTTGCTTCTGCGAGCCTAAGATGGCAGGCAGGATTAGCCGTGCTTGTGCTGTGTGTGCATGCTGTGTCTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS GCA 90 bp GAAAGGCCGTTGCCTCTTTATTTTGAGATTTGCTGCAGCTGCGAGTaGCACTCCCCAACTAGTTTCCTGGCTTCAGAGGGAGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: ERPLPLYFEICCSCE*HSPTSFLASEGGQW
Trigger: CCACTGGCCTCCCTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS CCA 90 bp TCACTTGCGTCATCGAACACTTCACTCATCTCCATGCACTCGGATTaGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTCTGGGTCATTC +
Preference number: 5 (lower is better)
Translates to: SLASSNTSLISMHSD*QSPSGLSPLGSGSF
Trigger: GAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp GCCTTCCCCACGGCGCAATCCAGTTCTGCTGGGTATTTACATTTATaGCTCGGGCTCCTGTTTCCGTGCTCCTTCCTCCAGTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: AFPTAQSSSAGYLHL*LGLLFPCSFLQLTF
Trigger: GAAAGTCAACTGGAGGAAGGAGCACGGAAACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp GGGTTTATCCTGAGGAGCCTTCCCCACGGCGCAATCCAGTTCTGCTaGGTATTTACATTTATGGCTCGGGCTCCTGTTTCCGTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: GFILRSLPHGAIQFC*VFTFMARAPVSVLL
Trigger: AAGGAGCACGGAAACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAGGATAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACTCCATGCACTCGGATaGGCAAAGCCCGAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRLHALG*AKPEWA
Trigger: AGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTCGGTGGGGCCTTCCTaGGTTTCCAGCCCCCACTGC +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSVGPS*VSSPHC
Trigger: GCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGGGCTCTGGAACTGCTaGGCGCAGAGCTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTGLWNC*AQSSQA
Trigger: TGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp CTACCCACTTTATCTGGCTCGGGCTTACTGTCATCTTTCAGGGACTaGCTGACAGCTGGGTCTGAAAAGGCTCTGTGGTTGCTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LPTLSGSGLLSSFRD*LTAGSEKALWLLLV
Trigger: GACCAGCAGCAACCACAGAGCCTTTTCAGACCCAGCTGTCAGTCAGTCCCTGAAAGATGACAGTAAGCCCGAGCCAGATAAAGTGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp AAAGGGTTTATCCTGAGGAGCCTTCCCCACGGCGCAATCCAGTTCTaGTGGGTATTTACATTTATGGCTCGGGCTCCTGTTTCCGTGCTC +
Preference number: 5 (lower is better)
Translates to: KGFILRSLPHGAIQF*WVFTFMARAPVSVL
Trigger: GAGCACGGAAACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAGGATAAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp GGAAGAGAAAGGCCGTTGCCTCTTTATTTTGAGATTTGCTGCAGCTaGGAGTGCCACTCCCCAACTAGTTTCCTGGCTTCAGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GRERPLPLYFEICCS*ECHSPTSFLASEGG
Trigger: GCCTCCCTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS CCA 90 bp GGAACAGCAGCTACAATTGTACACCAGAGGTGGAACCTCTGCGGCTaGCGGCCCGGGAACATCAGAAGATTGATTTTCATCTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GTAATIVHQRWNLCG*RPGNIRRLIFIFPG
Trigger: TCCAGGGAAGATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp GCTGTCAAAGGCTTTGGAACAGCAGCTACAATTGTACACCAGAGGTaGAACCTCTGCGGCTGGCGGCCCGGGAACATCAGAAGATTGATT +
Preference number: 5 (lower is better)
Translates to: AVKGFGTAATIVHQR*NLCGWRPGNIRRLI
Trigger: AATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTCCAAAGCCTTTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp CCCCGAATGCGCTGCTCATTTAAGATGGAGAGTACCGTGTCACTGTaGAAGTCGTCCTTGAGGTCCCTGGAAAGGGACATGACTGTCATC +
Preference number: 5 (lower is better)
Translates to: PRMRCSFKMESTVSL*KSSLRSLERDMTVI
Trigger: GATGACAGTCATGTCCCTTTCCAGGGACCTCAAGGACGACTTTCACAGTGACACGGTACTCTCCATCTTAAATGAGCAGCGCATTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000503809.5
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 90 bp GGCTTTGGAACAGCAGCTACAATTGTACACCAGAGGTGGAACCTCTaGGGCTGGCGGCCCGGGAACATCAGAAGATTGATTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GFGTAATIVHQRWNL*GWRPGNIRRLIFIF
Trigger: GAAGATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 90 bp AAGGCTCTGTGGTTGCTGCTGGTCATGGCAGCAATGGCATTGCTGTaGATGATCACCGATGAAAACTGGCTGCTGTGTACAATGACCGAG +
Preference number: 5 (lower is better)
Translates to: KALWLLLVMAAMALL*MITDENWLLCTMTE
Trigger: CTCGGTCATTGTACACAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGCTGCCATGACCAGCAGCAACCACAGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp GTTGTAGTAAGGGCGCCACGGTTTGTCAGTGGAATCCTGGTCACTTaGGTCATCGAACACTTCACTCATCTCCATGCACTCGGATTGGCA +
Preference number: 5 (lower is better)
Translates to: VVVRAPRFVSGILVT*VIEHFTHLHALGLA
Trigger: TGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCACTGACAAACCGTGGCGCCCTTACTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp TCCTTCAAGCCCAGGTGGATGCGTTCATGTTTCTGTAAGTTTCCTTaGACCGAAAAGCACCGTCCGCAGGTCTTGCACTGGTATGGCTTC +
Preference number: 5 (lower is better)
Translates to: SFKPRWMRSCFCKFP*TEKHRPQVLHWYGF
Trigger: GAAGCCATACCAGTGCAAGACCTGCGGACGGTGCTTTTCGGTGCAAGGAAACTTACAGAAACATGAACGCATCCACCTGGGCTTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCACCGTCCGCAGGTCTaGCACTGGTATGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVHRPQV*HWYGFS
Trigger: GGAGAAGCCATACCAGTGCAAGACCTGCGGACGGTG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp TGTTTGTTGCAATACTTGCACACTAAAGGCTCCTGGGTTGGCTTGTaGAGCTGCATGTGGGCACTGAGCAGAGTGCTGCTGTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: CLLQYLHTKGSWVGL*SCMWALSRVLLSKA
Trigger: AGCCTTTGACAGCAGCACTCTGCTCAGTGCCCACATGCAGCTTCACAAGCCAACCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp CAAACCTGCAGTCCATACTGGGCCAGCACAGGGGCCATATCAAAGTaGAATCTACTGCGCAGGTCTGTTATTCCCTGCGGAAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QTCSPYWASTGAISK*NLLRRSVIPCGKFS
Trigger: GGAAAACTTTCCGCAGGGAATAACAGACCTGCGCAGTAGATTTCACTTTGATATGGCCCCTGTGCTGGCCCAGTATGGACTGCAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS GCA 90 bp TGGAGAGGAAGAGAAAGGCCGTTGCCTCTTTATTTTGAGATTTGCTaGAGCTGCGAGTGCCACTCCCCAACTAGTTTCCTGGCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: WRGRERPLPLYFEIC*SCECHSPTSFLASE
Trigger: CTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTCTCTTCCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGGCTCTGGAACTGCTaGGCGCAGAGCTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGLWNC*AQSSQA
Trigger: TGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAGAGAGAAGAACTGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTREKNC*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCAGTTCTTCTCTCT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS GCA 90 bp CCTCCAGGAATGGGCATGTGGCTTGACCTCATGCAGATCTGTTCATaGCGATCCAACCTGTTCAGGGTGGTGAATTGTTTGTTGCAATAC +
Preference number: 5 (lower is better)
Translates to: PPGMGMWLDLMQICS*RSNLFRVVNCLLQY
Trigger: GTATTGCAACAAACAATTCACCACCCTGAACAGGTTGGATCGGCATGAACAGATCTGCATGAGGTCAAGCCACATGCCCATTCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 90 bp AGATGGAGAGGAAGAGAAAGGCCGTTGCCTCTTTATTTTGAGATTTaGTGCAGCTGCGAGTGCCACTCCCCAACTAGTTTCCTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RWRGRERPLPLYFEI*CSCECHSPTSFLAS
Trigger: TGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTCTCTTCCTCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS GCA 90 bp GTCCATACTGGGCCAGCACAGGGGCCATATCAAAGTGAAATCTACTaGGCAGGTCTGTTATTCCCTGCGGAAAGTTTTCCGACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: VHTGPAQGPYQSEIY*AGLLFPAESFPTKD
Trigger: ATCCTTTGTCGGAAAACTTTCCGCAGGGAATAACAGACCTGCGCAGTAGATTTCACTTTGATATGGCCCCTGTGCTGGCCCAGTATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS CCA 90 bp CCTCTCCCCATTTGGTACCCTCTGCATTTTGTACATTGGCAGAAGTaGGTATGTCCTGACATGCAGATGTTTCCAATGGGATGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PLPIWYPLHFVHWQK*VCPDMQMFPMGWLD
Trigger: GTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCTGCCAATGTACAAAATGCAGAGGGTACCAAATGGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp CTCCTTAATGCTTTTGGGTCTGCTTGCAAACCTACCCACTTTATCTaGCTCGGGCTTACTGTCATCTTTCAGGGACTGACTGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLNAFGSACKPTHFI*LGLTVIFQGLTDSW
Trigger: CCAGCTGTCAGTCAGTCCCTGAAAGATGACAGTAAGCCCGAGCCAGATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGCATTAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGCCTCCTCTCCCCATTaGGTACCCTCTGCATTTTGT +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMASSPH*VPSAFC
Trigger: ACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGGC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGCCAGCCCCCACTGCTTaGTCTCCATCACAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVPAPTA*SPSQSS
Trigger: TGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGG...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp AGAGGTGGAACCTCTGCGGCTGGCGGCCCGGGAACATCAGAAGATTaGTTTTCATCTTCCCTGGAAAAATGGACATCTCCTTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: RGGTSAAGGPGTSED*FSSSLEKWTSPSLF
Trigger: AAACAATGAAGGAGATGTCCATTTTTCCAGGGAAGATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp TTGGTACCCTCTGCATTTTGTACATTGGCAGAAGTGGGTATGTCCTaGCATGCAGATGTTTCCAATGGGATGGCTGGACTGTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LVPSAFCTLAEVGMS*HADVSNGMAGLLVR
Trigger: CCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCTGCCAATGTACAAAATGCAGAGGGTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp AGCTTGGGCATCTCTTTAGTTTCTTCTTCCTCAAAGGGTTTATCCTaGGGAGCCTTCCCCACGGCGCAATCCAGTTCTGCTGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: SLGISLVSSSSKGLS*GAFPTAQSSSAGYL
Trigger: TAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAGGATAAACCCTTTGAGGAAGAAGAAACTAAAGAGATGCCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp CCTTGTTGCAATACTGACAGACGAACTCCTTCAAGCCCAGGTGGATaGGTTCATGTTTCTGTAAGTTTCCTTGCACCGAAAAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: PCCNTDRRTPSSPGG*VHVSVSFLAPKSTV
Trigger: GACGGTGCTTTTCGGTGCAAGGAAACTTACAGAAACATGAACGCATCCACCTGGGCTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp CAGTCCTGTTGGCAAAGATTGGGCAGCAAGCCTTGTGGACCAAACTaGGGTTACTCTCCAGGAAAGAGCAAATTAGTGGTCACAACATTC +
Preference number: 5 (lower is better)
Translates to: QSCWQRLGSKPCGPN*GYSPGKSKLVVTTF
Trigger: GAATGTTGTGACCACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGGGGAATTTGAGAAGTaGCGATCAGTAAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRGEFEK*RSVRSS
Trigger: GGAAGACCTTACTGATCGCAACTTCTCAAATTCCCC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGGGGATGGCTGGACTGTaGGTCAGGGTGTTTACAGTA +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVGMAGL*VRVFTV
Trigger: TACTGTAAACACCCTGACCAACAGTCCAGCCATCCC...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGTCGGTGGGGCCTTCCTaGGTTTCCAGCCCCCACTGC +
Preference number: 5 (lower is better)
Translates to: SGLSKTLNHQKTSISFILSVGPS*VSSPHC
Trigger: GCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGA...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGATGGCCTTGTGGTGGTaGGAAGACTGCAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMMALWW*EDCREF
Trigger: AAACTCTCTGCAGTCTTCCAACCACCACAAGGCCAT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGCCTATGTAAAGACATaGCCCAGTGCCTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMAYVKT*PSAWYS
Trigger: TGAGTACCAGGCACTGGGCAATGTCTTTACATAGGC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACCTTCCAATACAAAATaGATGCTACTGGCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRPSNTK*MLLASH
Trigger: GTGGCTGGCCAGTAGCATCAATTTTGTATTGGAAGG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS TCA 90 bp ACCTCATGCAGATCTGTTCATGCCGATCCAACCTGTTCAGGGTGGTaGATTGTTTGTTGCAATACTTGCACACTAAAGGCTCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: TSCRSVHADPTCSGW*IVCCNTCTLKAPGL
Trigger: CAACCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACAATTCACCACCCTGAACAGGTTGGATCGGCATGAACAGATCTGCATGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp GAGATTCCTGTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATGGGGCTCGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EIPVLWKKSLGNPWF*VLHFFHIKMGLGSF
Trigger: GAAGGAGCCGAGCCCCATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504673.5
ENST00000510338.5
CDS TCA 90 bp TCAGAGTCTTGGTTCAATTGCTCGTGGTCTCGTTGTTCTGCAGGCTaGGCTAATTTTCTTTGCAGTCCTGTTGGCAAAGATTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SESWFNCSWSRCSAG*ANFLCSPVGKDWAA
Trigger: TGCTGCCCAATCTTTGCCAACAGGACTGCAAAGAAAATTAGCTCAGCCTGCAGAACAACGAGACCACGAGCAATTGAACCAAGACTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS GCA 90 bp TGGTTTCCAGCCCCCACTGCTTTGTCTCCATCACAGAGTTCACACTaGAGCTTGGGCATCTCTTTAGTTTCTTCTTCCTCAAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: WFPAPTALSPSQSSH*SLGISLVSSSSKGL
Trigger: TAAACCCTTTGAGGAAGAAGAAACTAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp AGAGTCTTGGTTCAACTGTTGGCAAAGATTGGGCAGCAAGCCTTGTaGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAAATTAGTGGT +
Preference number: 5 (lower is better)
Translates to: RVLVQLLAKIGQQAL*TKLGLLSRKEQISG
Trigger: ACCACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGTTGAACCAAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
CDS CCA 90 bp TCAATGCCTCCTCTCCCCATTTGGTACCCTCTGCATTTTGTACATTaGCAGAAGTGGGTATGTCCTGACATGCAGATGTTTCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: SMPPLPIWYPLHFVH*QKWVCPDMQMFPMG
Trigger: TCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCTGCCAATGTACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGGCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TCTTTTTGGGTTTGTAGTTGTAGTAAGGGCGCCACGGTTTGTCAGTaGAATCCTGGTCACTTGCGTCATCGAACACTTCACTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: SFWVCSCSKGATVCQ*NPGHLRHRTLHSSP
Trigger: TGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCACTGACAAACCGTGGCGCCCTTACTACAACTACAAACCCAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAGAGTCGGAGACCTTTTaGAAACTTGCCCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTESETF*KLALKS
Trigger: GGACTTGAGGGCAAGTTTCAAAAAGGTCTCCGACTC...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGTATGGAGAATGTCTTaGGCTTCCGGCATGTTTTCG +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMVWRMS*ASGMFS
Trigger: CGAAAACATGCCGGAAGCCAAAGACATTCTCCATAC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGAGAACAGCAGCTGGTaGTGGACTTCTTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRENSSW*WTSFLI
Trigger: AATCAAGAAAGAAGTCCACAACCAGCTGCTGTTCTC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGAATGGGCATGTGGCTaGACCTCATGCAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGEWACG*TSCRSV
Trigger: AACAGATCTGCATGAGGTCAAGCCACATGCCCATTC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGACTTGGAAATTCAGCGTaGGTAATTCAGAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRLGNSA*VIQSCV
Trigger: CACACAGCTCTGAATTACCAACGCTGAATTTCCAAG...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGATGGCAGCAATGGCATaGCTGTGCATGATCACCGAT +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVMAAMA*LCMITD
Trigger: ATCGGTGATCATGCACAGCAATGCCATTGCTGCCAT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCTCCATGCACTCGGATaGGCAAAGCCCGAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLLHALG*AKPEWA
Trigger: AGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTACACCGTCCGCAGGTCTaGCACTGGTATGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HIRAGRETSLQVILYLGLHRPQV*HWYGFS
Trigger: GGAGAAGCCATACCAGTGCAAGACCTGCGGACGGTG...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGATTCTCCAAGGGATTaGAGTTTTCGTGGCACACGT +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMDSPRD*SFRGTR
Trigger: ACGTGTGCCACGAAAACTCAAATCCCTTGGAGAATC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAATGGCCTTGTGGTGGTaGGAAGACTGCAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTMALWW*EDCREF
Trigger: AAACTCTCTGCAGTCTTCCAACCACCACAAGGCCAT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAACATCCCCTCTCACATaGCCCACTGGGACAAACTGC +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVTSPLT*PTGTNC
Trigger: GCAGTTTGTCCCAGTGGGCAATGTGAGAGGGGATGT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS TCA 90 bp TGGATTTTGAGGGTCTCATTCAAGGTGAATGCCTTGTTGCAATACTaGCAGACGAACTCCTTCAAGCCCAGGTGGATGCGTTCATGTTTC +
Preference number: 5 (lower is better)
Translates to: WILRVSFKVNALLQY*QTNSFKPRWMRSCF
Trigger: GAAACATGAACGCATCCACCTGGGCTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGGCATTCACCTTGAATGAGACCCTCAAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GAGATTCCTGTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTGCTGCCCGGAAAGC +
Preference number: 5 (lower is better)
Translates to: EIPVLWKKSLGNPWF*VLHFFHIKICCPES
Trigger: GCTTTCCGGGCAGCAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637056.1
CDS GCA 90 bp CTGCAAGGGCTTCACAATTTTCTTTCCCTGTGTTACCAGGTGAACTaGCATCATGTTCACGTACAGGCTGACTTCTGTAAGCTTCAGCTA +
Preference number: 5 (lower is better)
Translates to: LQGLHNFLSLCYQVN*HHVHVQADFCKLQL
Trigger: TAGCTGAAGCTTACAGAAGTCAGCCTGTACGTGAACATGATGGCAGTTCACCTGGTAACACAGGGAAAGAAAATTGTGAAGCCCTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TTCAACTGTTGGCAAAGATTGGGCAGCAAGCCTTGTGGACCAAACTaGGGTTACTCTCCAGGAAAGAGCAAATTAGTGGTCACAACATTC +
Preference number: 5 (lower is better)
Translates to: FNCWQRLGSKPCGPN*GYSPGKSKLVVTTF
Trigger: GAATGTTGTGACCACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
CDS CCA 90 bp AGAAGTGGGTATGTCCTGACATGCAGATGTTTCCAATGGGATGGCTaGACTGTTGGTCAGGGTGTTTACAGTATCTTGGAAATTCAGCGT +
Preference number: 5 (lower is better)
Translates to: RSGYVLTCRCFQWDG*TVGQGVYSILEIQR
Trigger: ACGCTGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TGGCAGAAGTGGGTATGTCCTGACATGCAGATGTTTCCAATGGGATaGCTGGACTGTTGGTCAGGGTGTTTACAGTATCTTGGAAATTCA +
Preference number: 5 (lower is better)
Translates to: WQKWVCPDMQMFPMG*LDCWSGCLQYLGNS
Trigger: TGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TACATTGGCAGAAGTGGGTATGTCCTGACATGCAGATGTTTCCAATaGGATGGCTGGACTGTTGGTCAGGGTGTTTACAGTATCTTGGAA +
Preference number: 5 (lower is better)
Translates to: YIGRSGYVLTCRCFQ*DGWTVGQGVYSILE
Trigger: TTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCTGCCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TTTCGGGCTCTGGCTATATCAACAGTTCCTCTTTTCCCCAAGAACTaGCTCTGGAAAGGGCATTCTTCTTCCTCTAGCATGAATAACCCT +
Preference number: 5 (lower is better)
Translates to: FRALAISTVPLFPKN*LWKGHSSSSSMNNP
Trigger: AGGGTTATTCATGCTAGAGGAAGAAGAATGCCCTTTCCAGAGCCAGTTCTTGGGGAAAAGAGGAACTGTTGATATAGCCAGAGCCCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS CCA 90 bp ATTTTCTTTGCAGTCCTGTTGGCAAAGATTGGGCAGCAAGCCTTGTaGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAAATTAGTGGT +
Preference number: 5 (lower is better)
Translates to: IFFAVLLAKIGQQAL*TKLGLLSRKEQISG
Trigger: ACCACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGGACTGCAAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGTATGGAGAATGTCTTaGGCTTCCGGCATGTTTTCG +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGVWRMS*ASGMFS
Trigger: CGAAAACATGCCGGAAGCCAAAGACATTCTCCATAC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACCTAAAGGCTCCTGGGTaGGCTTGTGAAGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHLKAPG*ACEAAC
Trigger: ACATGCAGCTTCACAAGCCAACCCAGGAGCCTTTAG...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAAGGGTGGTGAATTGTTaGTTGCAATACTTGCACACT +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRRVVNC*LQYLHT
Trigger: AGTGTGCAAGTATTGCAACAAACAATTCACCACCCT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCCTCCTCTCCCCATTaGGTACCCTCTGCATTTTGT +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTASSPH*VPSAFC
Trigger: ACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGGC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGCAATATTTGTGGTTTaGCTCAGTGATCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMAIFVV*LSDPPG
Trigger: TCCTGGAGGATCACTGAGCAAAACCACAAATATTGC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAACTTTCACAAGAAACTaGGGATATTGGAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRTFTRN*GYWRSQ
Trigger: CTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAGT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGGTAGGGCAATTAGATTaGAGGGTAGTGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMVGQLD*RVVLMV
Trigger: CACCATCAACACTACCCTCAAATCTAATTGCCCTAC...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGAGAAACCGGAGTCCTTaGAGCTACTTCTTCACAATG +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMRNRSP*SYFFTM
Trigger: CATTGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCT...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GAGATTCCTGTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTACCGCAGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: EIPVLWKKSLGNPWF*VLHFFHIKIYRSAG
Trigger: TCCTGCACTGCGGTAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS TCA 90 bp TCCCACACACATCTTTACAGTATATTTTCTCAAAGTCATGTTGGGTaGCTACGTCAGACCTCCTCACGTGACGGGGTGTTAGAAACACAC +
Preference number: 5 (lower is better)
Translates to: SHTHLYSIFSQSHVG*LRQTSSRDGVLETH
Trigger: GTGTGTTTCTAACACCCCGTCACGTGAGGAGGTCTGACGTAGTCACCCAACATGACTTTGAGAAAATATACTGTAAAGATGTGTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS GCA 90 bp CCGTCTCAGTTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSQLEQTSFNRVRFL*FGRNHLEILGSESS
Trigger: GGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAACTGAGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504673.5
CDS GCA 90 bp CAGCCTCAGTTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPQLEQTSFNRVRFL*FGRNHLEILGSESS
Trigger: GGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAACTGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513258.5
ENST00000514251.5
CDS GCA 90 bp CAGGTCTGTTATTCCCTGCGGAAAGTTTTCCGACAAAGGATATTTTaGTTCAGTGAGCTGGCTGTACCATCCCACACACATCTTTACAGT +
Preference number: 5 (lower is better)
Translates to: QVCYSLRKVFRQRIF*FSELAVPSHTHLYS
Trigger: ACTGTAAAGATGTGTGTGGGATGGTACAGCCAGCTCACTGAAGCAAAATATCCTTTGTCGGAAAACTTTCCGCAGGGAATAACAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGTAAACACTTCAGCTTaGAGATCGTCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTVNTSA*RSSSSR
Trigger: CCTGGAGCTGGACGATCTCAAAGCTGAAGTGTTTAC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGAGTCGGAGACCTTTTaGAAACTTGCCCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHESETF*KLALKS
Trigger: GGACTTGAGGGCAAGTTTCAAAAAGGTCTCCGACTC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGAACAGCAGCTACAATaGTACACCAGAGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVEQQLQ*YTRGGT
Trigger: GGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTCTGCATTTTGTACATaGGCAGAAGTGGGTATGTCC +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGSAFCT*AEVGMS
Trigger: GGACATACCCACTTCTGCCAATGTACAAAATGCAGA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGTGCAACATTACTATTaGTGGAGGTTCCCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHVQHYY*WRFPAE
Trigger: CTCTGCCGGGAACCTCCACAAATAGTAATGTTGCAC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACTGGAATCCTGGTCACTaGCGTCATCGAACACTTCAC +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHWNPGH*RHRTLH
Trigger: GTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCA...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAGTTCACACTGCAGCTaGGGCATCTCTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTSSHCS*GISLVS
Trigger: AGAAACTAAAGAGATGCCCAAGCTGCAGTGTGAACT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTCCAGCCCCCACTGCTTaGTCTCCATCACAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLPAPTA*SPSQSS
Trigger: TGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGG...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACATCTCATGTGCATTTaGAGTGTGGAAGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVHLMCI*SVEGLW
Trigger: CCAGAGCCCTTCCACACTCAAAATGCACATGAGATG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGCTTGCACTAAATCTCTaGGACAGTCCTTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGLALNL*DSPSVE
Trigger: TTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAG...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAGGTTCCTTTGTCCTTTaGCTTTATACTAGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRGSFVL*LYTSLY
Trigger: GTACAGACTAGTATAAAGCAAAAGGACAAAGGAACC...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACAAGGGTGGGGGTTCCTTaGTCCTTTTGCTTTATACTA +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTRVGVP*SFCFIL
Trigger: TAGTATAAAGCAAAAGGACAAAGGAACCCCCACCCT...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGAGAAACCGGAGTCCTTaGAGCTACTTCTTCACAATG +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVRNRSP*SYFFTM
Trigger: CATTGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACACAAAAACATGGGCTTaGGAGTCAGGCAGACCTAGG +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHTKTWA*ESGRPR
Trigger: CCTAGGTCTGCCTGACTCCAAAGCCCATGTTTTTGT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS TCA 90 bp CACTCCCTTTTCAGTAATACAGAATACATAGGGACCCGGGGAATTTaGGAAGTTGCGATCAGTAAGGTCTTCCAAGAACGATATTCCCAG +
Preference number: 5 (lower is better)
Translates to: HSLFSNTEYIGTRGI*EVAISKVFQERYSQ
Trigger: CTGGGAATATCGTTCTTGGAAGACCTTACTGATCGCAACTTCTCAAATTCCCCGGGTCCCTATGTATTCTGTATTACTGAAAAGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 90 bp AGTATGGATTCTTTCATGGATTTTGAGGGTCTCATTCAAGGTGAATaGCTTGTTGCAATACTGACAGACGAACTCCTTCAAGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SMDSFMDFEGLIQGE*LVAILTDELLQAQV
Trigger: CACCTGGGCTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGGCATTCACCTTGAATGAGACCCTCAAAATCCATGAAAGAATCCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp ACACCTCAGTTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPQLEQTSFNRVRFL*FGRNHLEILGSESS
Trigger: GGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAACTGAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512276.5
CDS GCA 90 bp TCTCCTCAGTTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPQLEQTSFNRVRFL*FGRNHLEILGSESS
Trigger: GGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAACTGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS CCA 90 bp GTATGTCCTGACATGCAGATGTTTCCAATGGGATGGCTGGACTGTTaGTCAGGGTGTTTACAGTATCTTGGAAATTCAGCGTTGGTAATT +
Preference number: 5 (lower is better)
Translates to: VCPDMQMFPMGWLDC*SGCLQYLGNSALVI
Trigger: AATTACCAACGCTGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 90 bp TCCCATTATGCTCCCGAATATGCCTCTGCTCGTGATTCCTTTTGGTaGAGAGATACAAAAATCTCTGAAAGCAGAACTGACAGTGGTAAC +
Preference number: 5 (lower is better)
Translates to: SHYAPEYASARDSFW*RDTKISESRTDSGN
Trigger: GTTACCACTGTCAGTTCTGCTTTCAGAGATTTTTGTATCTCTCCACCAAAAGGAATCACGAGCAGAGGCATATTCGGGAGCATAATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGTTCAGGGTGGTGAATaGTTTGTTGCAATACTTGCA +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGVQGGE*FVAILA
Trigger: TGCAAGTATTGCAACAAACAATTCACCACCCTGAAC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGTGCAACATTACTATTaGTGGAGGTTCCCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCVQHYY*WRFPAE
Trigger: CTCTGCCGGGAACCTCCACAAATAGTAATGTTGCAC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAAGTCTGTCTGGAATAGACCCCCACATCCATGGCCTTGTGGTGGTTGGAAGAAATTTTCACTGTTATTaGGCAAAGGGGTGCAACATT +
Preference number: 5 (lower is better)
Translates to: LSLSGIDPHIHGLVVVGRNFHCY*AKGCNI
Trigger: AATGTTGCACCCCTTTGCCAAATAACAGTGAAAATT...TCTTCCAACCACCACAAGGCCATGGATGTGGGGGTCTATTCCAGACAGACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGCAATCTTCGATAACCTaGGGTTTCCATCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMQSSIT*GFHLSN
Trigger: ATTTGACAGATGGAAACCCAAGGTTATCGAAGATTG...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACGTAATTTTCTCTGTGTaGGTGATGGACTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHVIFSV*VMDCAA
Trigger: GGCAGCACAGTCCATCACCAACACAGAGAAAATTAC...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS TCA 90 bp CAGCCTCAGAGTCTTGGTTCAAACTTAAGCAGAGCTGCTCCACAATaGATGTGTCCTTCTGCTTCTGAGAATCAAACAATCCTTTTGCTA +
Preference number: 5 (lower is better)
Translates to: QPQSLGSNLSRAAPQ*MCPSASENQTILLL
Trigger: TAGCAAAAGGATTGTTTGATTCTCAGAAGCAGAAGGACACATTCATTGTGGAGCAGCTCTGCTTAAGTTTGAACCAAGACTCTGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503809.5
ENST00000512327.1
CDS GCA 90 bp TCATCTCAGTTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSQLEQTSFNRVRFL*FGRNHLEILGSESS
Trigger: GGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAACTGAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321464.7
ENST00000503809.5
ENST00000507722.5
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000513570.1
ENST00000637056.1
CDS CCA 90 bp AGTCCTCCATTTCTTCCACATCAAGATCAGGAGTTTGGAAGATGTTaGTTCCAACCCTCATGGATGACTTTGAGAGATTCAAGACTTCAG +
Preference number: 5 (lower is better)
Translates to: SPPFLPHQDQEFGRC*FQPSWMTLRDSRLQ
Trigger: CTGAAGTCTTGAATCTCTCAAAGTCATCCATGAGGGTTGGAACCAACATCTTCCAAACTCCTGATCTTGATGTGGAAGAAATGGAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTTTGGAAGAAATCACTaGGAAATCCTTGGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVFGRNH*EILGSE
Trigger: CTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGTAAACACTTCAGCTTaGAGATCGTCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLVNTSA*RSSSSR
Trigger: CCTGGAGCTGGACGATCTCAAAGCTGAAGTGTTTAC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGGGGAATTTGAGAAGTaGCGATCAGTAAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCGEFEK*RSVRSS
Trigger: GGAAGACCTTACTGATCGCAACTTCTCAAATTCCCC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGAGACATCACACTTGTAGACAGAAACCGGAGTCCTTTGAGCTACTTCTTCACATGGACATCTCCTTCATaGTTTGGAGATTTTGAACGA +
Preference number: 5 (lower is better)
Translates to: GDITLVDRNRSPLSYFFTWTSPS*FGDFER
Trigger: TCGTTCAAAATCTCCAAACAATGAAGGAGATGTCCA...TGTGAAGAAGTAGCTCAAAGGACTCCGGTTTCTGTCTACAAGTGTGATGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCTAAAGGCTCCTGGGTaGGCTTGTGAAGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLKAPG*ACEAAC
Trigger: ACATGCAGCTTCACAAGCCAACCCAGGAGCCTTTAG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATGTTTGTTGCAATACTaGCACACTAAAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVCLLQY*HTKGSW
Trigger: CCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAAGGGTGGTGAATTGTTaGTTGCAATACTTGCACACT +
Preference number: 5 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGRVVNC*LQYLHT
Trigger: AGTGTGCAAGTATTGCAACAAACAATTCACCACCCT...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGTGCAGACTCATTCATTaGACTGTTTTCTCGTGCATT +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGCRLIH*TVFSCI
Trigger: AATGCACGAGAAAACAGTCAAATGAATGAGTCTGCA...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGGGGATGGCTGGACTGTaGGTCAGGGTGTTTACAGTA +
Preference number: 5 (lower is better)
Translates to: SGLSKTLNHQKTSISFILGMAGL*VRVFTV
Trigger: TACTGTAAACACCCTGACCAACAGTCCAGCCATCCC...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTAATGGCAGCAATGGCATaGCTGTGCATGATCACCGAT +
Preference number: 5 (lower is better)
Translates to: HIRAGRETSLQVILYLGLMAAMA*LCMITD
Trigger: ATCGGTGATCATGCACAGCAATGCCATTGCTGCCAT...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATGCTTTTGGGTCTGCTaGCAAACCTACCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVCFWVC*QTYPLY
Trigger: ATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGCA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAATATTTGTGGTTTaGCTCAGTGATCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTAIFVV*LSDPPG
Trigger: TCCTGGAGGATCACTGAGCAAAACCACAAATATTGC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAATGGGAGATGTTTCTTCAGCAATATTaGTGGTTTTGCTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: AVYLALNLLDSPSVEWEMFLQQY*WFCSVI
Trigger: GATCACTGAGCAAAACCACAAATATTGCTGAAGAAA...CATCTCCCATTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGATTTTCCACACCGGTTaGTATGTTATCCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVIFHTG*YVILLV
Trigger: GACCAAAAGGATAACATACAAACCGGTGTGGAAAAT...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAGTAGGGCAATTAGATTaGAGGGTAGTGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVVGQLD*RVVLMV
Trigger: CACCATCAACACTACCCTCAAATCTAATTGCCCTAC...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GAGATTCCTGTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCAGGAGTTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: EIPVLWKKSLGNPWF*VLHFFHIKIRSLED
Trigger: ATCTTCCAAACTCCTGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS TCA 90 bp CCAGACAGAAGGCATTTCATACACTTAAGCAGAGCTGCTCCACAATaGATGTGTCCTTCTGCTTCTGAGAATCAAACAATCCTTTTGCTA +
Preference number: 5 (lower is better)
Translates to: PDRRHFIHLSRAAPQ*MCPSASENQTILLL
Trigger: TAGCAAAAGGATTGTTTGATTCTCAGAAGCAGAAGGACACATTCATTGTGGAGCAGCTCTGCTTAAGTGTATGAAATGCCTTCTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513249.1
CDS GCA 90 bp TGTAGGTTTCAATTTTGCTGGTTTCTTCAGCAATATTTGTGGTTTTaGTCAGTGATCCTCCAGGATCAGCAACATAGTTTGACTCCTCCG +
Preference number: 5 (lower is better)
Translates to: CRFQFCWFLQQYLWF*SVILQDQQHSLTPP
Trigger: CGGAGGAGTCAAACTATGTTGCTGATCCTGGAGGATCACTGAGCAAAACCACAAATATTGCTGAAGAAACCAGCAAAATTGAAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTACTGTTTCCTGTCTCTaGACAACGACTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLTVSCL*TTTVEL
Trigger: CAGTTCCACAGTCGTTGTCAAGAGACAGGAAACAGT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGAACAGCAGCTACAATaGTACACCAGAGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALEQQLQ*YTRGGT
Trigger: GGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GTTTTAGGCAAGGAAGGCCATCACTTCTTCTTGCCCACTCAAGTCATTAATGGGGTGGTGAATTGTTTGTaGCAATACTTGCACACTAAA +
Preference number: 5 (lower is better)
Translates to: VLGKEGHHFFLPTQVINGVVNCL*QYLHTK
Trigger: TTTAGTGTGCAAGTATTGCAACAAACAATTCACCAC...CCCATTAATGACTTGAGTGGGCAAGAAGAAGTGATGGCCTTCCTTGCCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGTTCAGGGTGGTGAATaGTTTGTTGCAATACTTGCA +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTVQGGE*FVAILA
Trigger: TGCAAGTATTGCAACAAACAATTCACCACCCTGAAC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGGAATGGGCATGTGGCTaGACCTCATGCAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYREWACG*TSCRSV
Trigger: AACAGATCTGCATGAGGTCAAGCCACATGCCCATTC...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTGCTTTTGGGTCTGCTaGCAAACCTACCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCCFWVC*QTYPLY
Trigger: ATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGCA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACTTCTCCTTAATGCTTTaGGGTCTGCTTGCAAACCTA +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHFSLML*GLLANL
Trigger: TAGGTTTGCAAGCAGACCCAAAAGCATTAAGGAGAA...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAGTGTTTCTTCAGCAATATTaGTGGTTTTGCTCAGTGATC +
Preference number: 5 (lower is better)
Translates to: IVGIRQSLSSAWEFTTAVFLQQY*WFCSVI
Trigger: GATCACTGAGCAAAACCACAAATATTGCTGAAGAAA...CACTGCAGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTGGAATCCTGGTCACTaGCGTCATCGAACACTTCAC +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRWNPGH*RHRTLH
Trigger: GTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGCATCTCATGTGCATTTaGAGTGTGGAAGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SGLSKTLNHQKTSISFILHLMCI*SVEGLW
Trigger: CCAGAGCCCTTCCACACTCAAAATGCACATGAGATG...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAACTTTCACAAGAAACTaGGGATATTGGAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVTFTRN*GYWRSQ
Trigger: CTGACTCCTCCAATATCCCAAGTTTCTTGTGAAAGT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTCTGAGATGAGGCCATaGCAAAGTAATATGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCSEMRP*QSNMQH
Trigger: GTGCTGCATATTACTTTGCAATGGCCTCATCTCAGA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAGGGTGGGGGTTCCTTaGTCCTTTTGCTTTATACTA +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCRVGVP*SFCFIL
Trigger: TAGTATAAAGCAAAAGGACAAAGGAACCCCCACCCT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGACAATCTTCGATAACCTaGGGTTTCCATCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGQSSIT*GFHLSN
Trigger: ATTTGACAGATGGAAACCCAAGGTTATCGAAGATTG...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp ATCTTCCCTGGAAAAATGGACATCTCCTTCATTGTTTGGAGATTTTaGACGAGTGAGAACAGCAGCTGGTTGTGGACTTCTTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: IFPGKMDISFIVWRF*TSENSSWLWTSFLI
Trigger: AATCAAGAAAGAAGTCCACAACCAGCTGCTGTTCTCACTCGTTCAAAATCTCCAAACAATGAAGGAGATGTCCATTTTTCCAGGGAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 90 bp CACCGGTTTGTATGTTATCCTTTTGGTCATTGTCTTCTGAACCAATaGAATGTTGATTCTCCAAGGGATTTGAGTTTTCGTGGCACACGT +
Preference number: 5 (lower is better)
Translates to: HRFVCYPFGHCLLNQ*NVDSPRDLSFRGTR
Trigger: ACGTGTGCCACGAAAACTCAAATCCCTTGGAGAATCAACATTTCATTGGTTCAGAAGACAATGACCAAAAGGATAACATACAAACCGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp CGCTACCAGATGATATGGCATACAGAGCATTTACATACTCACATCTaGAATACTAGGCAACGTGTAATGAATTCTAGACACAGCATGCAC +
Preference number: 5 (lower is better)
Translates to: RYQMIWHTEHLHTHI*NTRQRVMNSRHSMH
Trigger: GTGCATGCTGTGTCTAGAATTCATTACACGTTGCCTAGTATTTCAGATGTGAGTATGTAAATGCTCTGTATGCCATATCATCTGGTAGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS TCA 90 bp TGCAGGAAGGGTATTTCATGGCAAGCCTGGAGAACAAAATCAGTATaGGATGAATCACGTTCCAAAATAATTGAACCAGAGAAAGACTCC +
Preference number: 5 (lower is better)
Translates to: CRKGISWQAWRTKSV*DESRSKIIEPEKDS
Trigger: GGAGTCTTTCTCTGGTTCAATTATTTTGGAACGTGATTCATCTCATACTGATTTTGTTCTCCAGGCTTGCCATGAAATACCCTTCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CCA 90 bp GTAGAGCATTTGCCCATTAACAAATTTAACCATGTGGTCCGTGTCTaGCAAAGTACTTCCGGTACTGGAAAATTCACCAATCCTATTTTC +
Preference number: 5 (lower is better)
Translates to: VEHLPINKFNHVVRV*QSTSGTGKFTNPIF
Trigger: GAAAATAGGATTGGTGAATTTTCCAGTACCGGAAGTACTTTGCCAGACACGGACCACATGGTTAAATTTGTTAATGGGCAAATGCTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTATTTGGAAGAAATCACTaGGAAATCCTTGGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVFGRNH*EILGSE
Trigger: CTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAA...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp ATTCACTACTGCAGTGTACCTTGCACTAAATCTCTTGGACAGTCCTTCAGTGGAGTGGTGAATTGTTTGTaGCAATACTTGCACACTAAA +
Preference number: 5 (lower is better)
Translates to: IHYCSVPCTKSLGQSFSGVVNCL*QYLHTK
Trigger: TTTAGTGTGCAAGTATTGCAACAAACAATTCACCAC...TCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAGGTACACTGCAGTAGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTTCTGCATTTTGTACATaGGCAGAAGTGGGTATGTCC +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLSAFCT*AEVGMS
Trigger: GGACATACCCACTTCTGCCAATGTACAAAATGCAGA...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAATTCTTTCATGGATTTaGAGGGTCTCATTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVILSWI*RVSFKV
Trigger: CACCTTGAATGAGACCCTCAAAATCCATGAAAGAAT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTGATTCTCCAAGGGATTaGAGTTTTCGTGGCACACGT +
Preference number: 5 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALDSPRD*SFRGTR
Trigger: ACGTGTGCCACGAAAACTCAAATCCCTTGGAGAATC...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGAGGAGTCAGCTATTTaGTTTTTGTGCACTTTGCAT +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTEESAI*FLCTLH
Trigger: ATGCAAAGTGCACAAAAACAAAATAGCTGACTCCTC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTAATAGTGCAGAAGCCAGATGGGAATAAAGACCGTCACACAGCTTATTACCACAAGAAACTTGGGATATaGGAGGAGTCAGCTATTTTG +
Preference number: 5 (lower is better)
Translates to: LIVQKPDGNKDRHTAYYHKKLGI*EESAIL
Trigger: CAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTT...GTGGTAATAAGCTGTGTGACGGTCTTTATTCCCATCTGGCTTCTGCACTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTAAAGAAACTTGGGATATaGGAGGAGTCAGCTATTTTG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVKKLGI*EESAIL
Trigger: CAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTT...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CATATAAGGGCTGGGAGAGAGACATCACTACAGGTAATTTTATATTTGGGGTTATCTGAGATGAGGCCATaGCAAAGTAATATGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HIRAGRETSLQVILYLGLSEMRP*QSNMQH
Trigger: GTGCTGCATATTACTTTGCAATGGCCTCATCTCAGA...TAACCCCAAATATAAAATTACCTGTAGTGATGTCTCTCTCCCAGCCCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp AATCATGAGTTCCGGCTTTCCAGGAACCTAGTCCACATGATAGAATATGCTGTACTCAATAAATGTAATTaGTTTCCCACGGATGAGTGG +
Preference number: 5 (lower is better)
Translates to: NHEFRLSRNLVHMIEYAVLNKCN*FPTDEW
Trigger: CCACTCATCCGTGGGAAACAAATTACATTTATTGAG...TACAGCATATTCTATCATGTGGACTAGGTTCCTGGAAAGCCGGAACTCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS TCA 90 bp GAGATTCCTGTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTTAAATGCAGTATCT +
Preference number: 5 (lower is better)
Translates to: EIPVLWKKSLGNPWF*VLHFFHIKILNAVS
Trigger: AGATACTGCATTTAAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000321464.7
ENST00000503809.5
ENST00000507722.5
ENST00000512276.5
ENST00000513249.1
ENST00000513258.5
ENST00000636289.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGGAGAACAGCAGCTGGTaGTGGACTTCTTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRENSSW*WTSFLI
Trigger: AATCAAGAAAGAAGTCCACAACCAGCTGCTGTTCTC...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCTGGACATCTCCTTCATaGTTTGGAGATTTTGAACGA +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCWTSPS*FGDFER
Trigger: TCGTTCAAAATCTCCAAACAATGAAGGAGATGTCCA...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTTGTTTGTTGCAATACTaGCACACTAAAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALCLLQY*HTKGSW
Trigger: CCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACA...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp CTAGTAATTGTAGGGATTAGGCAGTCACTTTCAAGTGCCTGGGAATTCACTACTGCAACTGTAGAGCATTaGCCCATTAACAAATTTAAC +
Preference number: 5 (lower is better)
Translates to: LVIVGIRQSLSSAWEFTTATVEH*PINKFN
Trigger: GTTAAATTTGTTAATGGGCAAATGCTCTACAGTTGC...AGTAGTGAATTCCCAGGCACTTGAAAGTGACTGCCTAATCCCTACAATTACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCTTGGAAATTCAGCGTaGGTAATTCAGAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLGNSA*VIQSCV
Trigger: CACACAGCTCTGAATTACCAACGCTGAATTTCCAAG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTCACAAGAAACTTGGGATATTGGAGGAGTCAGCTATTTTGTTTTTGTGCACTTCCGGCAGAGCAGGTTTaGCAATGTAGGTTTCAATTT +
Preference number: 5 (lower is better)
Translates to: FTRNLGYWRSQLFCFCALPAEQV*QCRFQF
Trigger: AAATTGAAACCTACATTGCAAAACCTGCTCTGCCGG...AAGTGCACAAAAACAAAATAGCTGACTCCTCCAATATCCCAAGTTTCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCCGGCAGAGCAGGTTTaGCAATGTAGGTTTCAATTT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRPAEQV*QCRFQF
Trigger: AAATTGAAACCTACATTGCAAAACCTGCTCTGCCGG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGAGTTCACACTGCAGCTaGGGCATCTCTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRSSHCS*GISLVS
Trigger: AGAAACTAAAGAGATGCCCAAGCTGCAGTGTGAACT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGCTTGCACTAAATCTCTaGGACAGTCCTTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRLALNL*DSPSVE
Trigger: TTCCACTGAAGGACTGTCCAAGAGATTTAGTGCAAG...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS CCA 90 bp ATTTCAGTAAACACTTCAGCTTTGAGATCGTCCAGCTCCAGGACGTaGCTGGAAATACAGATTGTATGGCTCCAAAAGATATTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: ISVNTSALRSSSSRT*LEIQIVWLQKIFLK
Trigger: TTTTAAAAATATCTTTTGGAGCCATACAATCTGTATTTCCAGCCACGTCCTGGAGCTGGACGATCTCAAAGCTGAAGTGTTTACTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCGCAACTGTAGAGCATTaGCCCATTAACAAATTTAAC +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCATVEH*PINKFN
Trigger: GTTAAATTTGTTAATGGGCAAATGCTCTACAGTTGC...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TCAGGCCTATCCAAAACACTCAATCATCAGAAGACTTCAATCTCTTTTATTCTGTTCTCCTTAATGCTTTaGGGTCTGCTTGCAAACCTA +
Preference number: 5 (lower is better)
Translates to: SGLSKTLNHQKTSISFILFSLML*GLLANL
Trigger: TAGGTTTGCAAGCAGACCCAAAAGCATTAAGGAGAA...CAGAATAAAAGAGATTGAAGTCTTCTGATGATTGAGTGTTTTGGATAGGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514251.5
CDS-3UTR CAA 90 bp GGGAATAAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCAATTTTCACTGTTATTaGGCAAAGGGGTGCAACATT +
Preference number: 5 (lower is better)
Translates to: GNKDRHTAYYHVTYLRRCNFHCY*AKGCNI
Trigger: AATGTTGCACCCCTTTGCCAAATAACAGTGAAAATT...GCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTTATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTATTCTTTCATGGATTTaGAGGGTCTCATTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLILSWI*RVSFKV
Trigger: CACCTTGAATGAGACCCTCAAAATCCATGAAAGAAT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTATTTTCCACACCGGTTaGTATGTTATCCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLIFHTG*YVILLV
Trigger: GACCAAAAGGATAACATACAAACCGGTGTGGAAAAT...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp AAAGACCGTCACACAGCTTATTACCACGTAACATATTTACGAAGATGCCATCTTGGTTCCTTTGTCCTTTaGCTTTATACTAGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KDRHTAYYHVTYLRRCHLGSFVL*LYTSLY
Trigger: GTACAGACTAGTATAAAGCAAAAGGACAAAGGAACC...AAGATGGCATCTTCGTAAATATGTTACGTGGTAATAAGCTGTGTGACGGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS TCA 90 bp GCCTCAGAGTCTTGGTTCAATGTAAGAGAAGAAATCGTGTTGTGCTaGGATGCAATGTTTCTTTGTTTTACTTTGAGGCTTATTTTAGCT +
Preference number: 5 (lower is better)
Translates to: ASESWFNVREEIVLC*DAMFLCFTLRLILA
Trigger: AGCTAAAATAAGCCTCAAAGTAAAACAAAGAAACATTGCATCTCAGCACAACACGATTTCTTCTCTTACATTGAACCAAGACTCTGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGTGCAGACTCATTCATTaGACTGTTTTCTCGTGCATT +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRCRLIH*TVFSCI
Trigger: AATGCACGAGAAAACAGTCAAATGAATGAGTCTGCA...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS-3UTR CAA 90 bp TTACATCAGTCCTCATTATTTGCAGATCTATTGCTCCTCATAATTCTCTACAGGATCAGTCCTCATTATTaGCAGATCTATTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LHQSSLFADLLLLIILYRISPHY*QIYCSS
Trigger: TGAGGAGCAATAGATCTGCAAATAATGAGGACTGAT...CCTGTAGAGAATTATGAGGAGCAATAGATCTGCAAATAATGAGGACTGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514251.5
ENST00000637056.1
CDS GCA 90 bp GAACTTGTGATAATGAAACTACACCTCTGTACACAAACCTTGACCTaGATTCTGGAGCATACTGCAAAGAAAACCTTAATTTTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: ELVIMKLHLCTQTLT*ILEHTAKKTLILKV
Trigger: TACTTTCAAAATTAAGGTTTTCTTTGCAGTATGCTCCAGAATGCAGGTCAAGGTTTGTGTACAGAGGTGTAGTTTCATTATCACAAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS GCA 90 bp CTGAATTTCTGCAATCTTATTATAAAACTTGATCAGATGAGGAGTTaGTTCTTATGGATGAGCAAAGAAACTGGTTTCTTGAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LNFCNLIIKLDQMRS*FLWMSKETGFLRWN
Trigger: ATTCCACCTCAAGAAACCAGTTTCTTTGCTCATCCATAAGAAGCAACTCCTCATCTGATCAAGTTTTATAATAAGATTGCAGAAATTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS GCA 90 bp AGAGTCTTGGTTCAATGTAAGAGAAGAAATCGTGTTGTGCTGAGATaGAATGTTTCTTTGTTTTACTTTGAGGCTTATTTTAGCTATGCT +
Preference number: 5 (lower is better)
Translates to: RVLVQCKRRNRVVLR*NVSLFYFEAYFSYA
Trigger: AGCATAGCTAAAATAAGCCTCAAAGTAAAACAAAGAAACATTGCATCTCAGCACAACACGATTTCTTCTCTTACATTGAACCAAGACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS CCA 90 bp AAGATATTTTTAAAATACAGGCTTGAAGCTGCCAGAACATTGCTATaGGCTTTAAATTTGGTATCTTCCACAATGATAGTGACATCGCAT +
Preference number: 5 (lower is better)
Translates to: KIFLKYRLEAARTLL*ALNLVSSTMIVTSH
Trigger: ATGCGATGTCACTATCATTGTGGAAGATACCAAATTTAAAGCCCATAGCAATGTTCTGGCAGCTTCAAGCCTGTATTTTAAAAATATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp CCTTCGCCGCCGGCGCGTTTCCCCGGGGGTCCATGGTaGTTCCGGACCCGTGAGTCCGGCCGCAGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSPPARFPGGPW*FRTRESGRSAA
Trigger: TGCAGCGCTGCGGCCGGACTCACGGGTCCGGAAGCACCATGGACCCCCGGGGAAACGCGCCGGCGGCGAAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510338.5
CDS CCA 72 bp GCTCCTTCGCCGCCGGCGCGTTTCCCCGGGGGTCCATaGTGCTTCCGGACCCGTGAGTCCGGCCGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: APSPPARFPGGP*CFRTRESGRSA
Trigger: AGCGCTGCGGCCGGACTCACGGGTCCGGAAGCACCATGGACCCCCGGGGAAACGCGCCGGCGGCGAAGGAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504673.5
ENST00000510338.5
CDS TCA 72 bp GCGTTTCCCCGGGGGTCCATGGTGCTTCCGGACCCGTaGGTCCGGCCGCAGCGCTGCACAGCACCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: AFPRGSMVLPDP*VRPQRCTAPPR
Trigger: TCTGGGCGGTGCTGTGCAGCGCTGCGGCCGGACTCACGGGTCCGGAAGCACCATGGACCCCCGGGGAAACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510338.5
CDS CCA 72 bp GTTTCCTGGCTTCAGAGGGAGGCCAGTGGCCGGGCGTaGGTGACGTCAGGGCCAGGCCTGAGTCATCGCCAG +
Preference number: 6 (lower is better)
Translates to: VSWLQREASGRA*VTSGPGLSHRQ
Trigger: CTGGCGATGACTCAGGCCTGGCCCTGACGTCACCCACGCCCGGCCACTGGCCTCCCTCTGAAGCCAGGAAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512276.5
ENST00000513619.5
CDS CCA 72 bp GCTGCAGCTGCGAGTGCCACTCCCCAACTAGTTTCCTaGCTTCAGAGGGAGGCCAGTGGCCGGGCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AAAASATPQLVS*LQREASGRAWV
Trigger: CACCCACGCCCGGCCACTGGCCTCCCTCTGAAGCCAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS CAA 90 bp CCGGGCCGGGCTGCCCTGCCACTCGGAAGGGGACAAAAGGAACCTTaGATGTCCAGAGGCCCTCCTCTCAGCACACTCGCCGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: PGRAALPLGRGQKEP*MSRGPPLSTLAGTD
Trigger: GTCTGTGCCGGCGAGTGTGCTGAGAGGAGGGCCTCTGGACATCAAAGGTTCCTTTTGTCCCCTTCCGAGTGGCAGGGCAGCCCGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512276.5
ENST00000513619.5
CDS CCA 72 bp GAGTGCTCGGCAAGTGTGCGGACAGGCTCTGCCTCGTaGCAGACGTCCGTCCTCTCCAGGCAAAGGCTAGCT +
Preference number: 6 (lower is better)
Translates to: ECSASVRTGSAS*QTSVLSRQRLA
Trigger: AGCTAGCCTTTGCCTGGAGAGGACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp CTAGGGTCCGATTCCCAATCCAGGAGACGGGAGGTGTaGCTGTCAAAGCAGTGCCCGAGCCCGCTGGACTCG +
Preference number: 6 (lower is better)
Translates to: LGSDSQSRRREV*LSKQCPSPLDS
Trigger: CGAGTCCAGCGGGCTCGGGCACTGCTTTGACAGTCACACCTCCCGTCTCCTGGATTGGGAATCGGACCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS GCA 72 bp CTACGGAAGAAACAGCGTATGAGTGCTCGGCAAGTGTaGGGACAGGCTCTGCCTCGTGGCAGACGTCCGTCC +
Preference number: 6 (lower is better)
Translates to: LRKKQRMSARQV*GQALPRGRRPS
Trigger: GGACGGACGTCTGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTCATACGCTGTTTCTTCCGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp CAGTCCCCAGGGATTATGGGGCTCATGCTAGGGACCTaGCGGTCAGGGTGCAGCATGAGACTGGTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: QSPGIMGLMLGT*RSGCSMRLVSV
Trigger: CACACTCACCAGTCTCATGCTGCACCCTGACCGGCAGGTCCCTAGCATGAGCCCCATAATCCCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510726.1
ENST00000636289.1
CDS GCA 72 bp CCTGCCATCTTAGGCTCGCAGAAGCAAGATACGCACTaGATGCAGCACACGAGCACTGGGGAAGGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: PAILGSQKQDTH*MQHTSTGEGGG
Trigger: GCCTCCTCCTTCCCCAGTGCTCGTGTGCTGCATGCAGTGCGTATCTTGCTTCTGCGAGCCTAAGATGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS CCA 72 bp TTGGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTCTaGGTCATTCCCCTGTGGCAAAGGCTCCTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: LAKPEWAVSTGF*VIPLWQRLLLH
Trigger: ATGCAGGAGGAGCCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp AACAGAGCAGACCTTACTACTGCAGAAGTAGGCGGCTaGGACTGCAAACCCCTGGGGGCAGGTCCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: NRADLTTAEVGG*DCKPLGAGPCL
Trigger: AAGGCAGGGACCTGCCCCCAGGGGTTTGCAGTCTCAGCCGCCTACTTCTGCAGTAGTAAGGTCTGCTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS GCA 72 bp GCTGTTCTAAAGGCCAACATCGGGAAGCTGCTGGAGTaGACTCAGCAGAGAGGGAGGCCAGCTTGGACAACC +
Preference number: 6 (lower is better)
Translates to: AVLKANIGKLLE*TQQRGRPAWTT
Trigger: GGTTGTCCAAGCTGGCCTCCCTCTCTGCTGAGTGCACTCCAGCAGCTTCCCGATGTTGGCCTTTAGAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS CCA 72 bp GGCTTTGGAACAGCAGCTACAATTGTACACCAGAGGTaGAACCTCTGCGGCTGGCGGCCCGGGAACATCAGA +
Preference number: 6 (lower is better)
Translates to: GFGTAATIVHQR*NLCGWRPGNIR
Trigger: TCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTCCAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp ACTCATCTCCATGCACTCGGATTGGCAAAGCCCGAGTaGGCTGTCTCCACTGGGTTCTGGGTCATTCCCCTG +
Preference number: 6 (lower is better)
Translates to: THLHALGLAKPE*AVSTGFWVIPL
Trigger: CAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp AGCTCGCAGGCATATGGCCGAGAAGTAAGATGTCGGTaGGGCCTTCCTTGGTTTCCAGCCCCCACTGCTTTG +
Preference number: 6 (lower is better)
Translates to: SSQAYGREVRCR*GLPWFPAPTAL
Trigger: CAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCTCGGCCATATGCCTGCGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp CATGAGACTGGTGAGTGTGAAGCTTCAGGGGAGCACTaGGGGAAGAGAGTCTCCAAGGGCAGAGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: HETGECEASGEH*GKRVSKGRAGF
Trigger: GAAGCCAGCTCTGCCCTTGGAGACTCTCTTCCCCCAGTGCTCCCCTGAAGCTTCACACTCACCAGTCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510726.1
ENST00000636289.1
CDS TCA 72 bp GAAGAACTGCTTGAACCCGGGAGGCGGAGGTTGTGGTaGGCCAAGATTGCGCCATTGTACTCCAGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: EELLEPGRRRLW*AKIAPLYSSLS
Trigger: ACTGAGGCTGGAGTACAATGGCGCAATCTTGGCTCACCACAACCTCCGCCTCCCGGGTTCAAGCAGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513258.5
ENST00000514251.5
CDS CCA 72 bp TGGGCTGTCTCCACTGGGTTCTGGGTCATTCCCCTGTaGCAAAGGCTCCTCCTGCATCTGATACTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: WAVSTGFWVIPL*QRLLLHLILGS
Trigger: AGACCCAAGTATCAGATGCAGGAGGAGCCTTTGCCACAGGGGAATGACCCAGAACCCAGTGGAGACAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp GTGCTGCTGTCAAAGGCTTTGGAACAGCAGCTACAATaGTACACCAGAGGTGGAACCTCTGCGGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: VLLSKALEQQLQ*YTRGGTSAAGG
Trigger: GCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGTTCCAAAGCCTTTGACAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 90 bp CTCGCAGGCATATGGCCGAGAAGTAAGATGTCGGTGGGGCCTTCCTaGGTTTCCAGCCCCCACTGCTTTGTCTCCATCACAGAGTTCACA +
Preference number: 6 (lower is better)
Translates to: LAGIWPRSKMSVGPS*VSSPHCFVSITEFT
Trigger: TGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCTCGGCCATATGCCTGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp CTGGCTCGGGCTTACTGTCATCTTTCAGGGACTGACTaGCAGCTGGGTCTGAAAAGGCTCTGTGGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: LARAYCHLSGTD*QLGLKRLCGCC
Trigger: GCAGCAACCACAGAGCCTTTTCAGACCCAGCTGTCAGTCAGTCCCTGAAAGATGACAGTAAGCCCGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp GAAGAGAGTCTCCAAGGGCAGAGCTGGCTTCTGGTGTaGACCTCCTCCATGATGGAGGCAAGAGTCTCCATG +
Preference number: 6 (lower is better)
Translates to: EESLQGQSWLLV*TSSMMEARVSM
Trigger: CATGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTTGGAGACTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510726.1
CDS TCA 72 bp GAAGAGAGTCTCCAAGGGCAGAGCTGGCTTCTGGTGTaGACCTCCTCCATGATGGAGGCAAGAGTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: EESLQGQSWLLV*TSSMMEARVSS
Trigger: TGAGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTTGGAGACTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS GCA 72 bp GGTCACTTGCGTCATCGAACACTTCACTCATCTCCATaGACTCGGATTGGCAAAGCCCGAGTGGGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GHLRHRTLHSSP*TRIGKARVGCL
Trigger: GAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp ATGTCGGTGGGGCCTTCCTTGGTTTCCAGCCCCCACTaGTTTGTCTCCATCACAGAGTTCACACTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: MSVGPSLVSSPH*FVSITEFTLQL
Trigger: AAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp CTCATGTGCATTTTGAGTGTGGAAGGGCTCTGGAACTaGTTGGCGCAGAGCTCGCAGGCATATGGCCGAGAA +
Preference number: 6 (lower is better)
Translates to: LMCILSVEGLWN*LAQSSQAYGRE
Trigger: TTCTCGGCCATATGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCCTTCCACACTCAAAATGCACATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp GCATGCACACACAGCACAAGCACGGCTAATCCTGCCTaGCATCTTAGGCTCGCAGAAGCAAGATACGCACTG +
Preference number: 6 (lower is better)
Translates to: ACTHSTSTANPA*HLRLAEARYAL
Trigger: CAGTGCGTATCTTGCTTCTGCGAGCCTAAGATGGCAGGCAGGATTAGCCGTGCTTGTGCTGTGTGTGCATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS GCA 72 bp CCAGGGCAGCAGGAAAGCCCTCCTAGAAAACTCAAGTaGCCATATTCATTTGGTAGGGCTGCCCGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: PGQQESPPRKLK*PYSFGRAARGL
Trigger: AAGGCCTCGGGCAGCCCTACCAAATGAATATGGGCACTTGAGTTTTCTAGGAGGGCTTTCCTGCTGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS CCA 72 bp CTGAGGAGCCTTCCCCACGGCGCAATCCAGTTCTGCTaGGTATTTACATTTATGGCTCGGGCTCCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: LRSLPHGAIQFC*VFTFMARAPVS
Trigger: GGAAACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp GTCATCGAACACTTCACTCATCTCCATGCACTCGGATaGGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTC +
Preference number: 6 (lower is better)
Translates to: VIEHFTHLHALG*AKPEWAVSTGF
Trigger: GAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 90 bp GTCACTTGCGTCATCGAACACTTCACTCATCTCCATGCACTCGGATaGGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTCTGGGTCATT +
Preference number: 6 (lower is better)
Translates to: VTCVIEHFTHLHALG*AKPEWAVSTGFWVI
Trigger: AATGACCCAGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp ACTTCTGTAAGCTTCAGCTACGGAAGAAACAGCGTATaGGTGCTCGGCAAGTGTGCGGACAGGCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: TSVSFSYGRNSV*VLGKCADRLCL
Trigger: GAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTCATACGCTGTTTCTTCCGTAGCTGAAGCTTACAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp AAGGGCAGAGCTGGCTTCTGGTGTGAACCTCCTCCATaGTGGAGGCAAGAGTCTCCATGTCTCCTGCTTATG +
Preference number: 6 (lower is better)
Translates to: KGRAGFWCEPPP*WRQESPCLLLM
Trigger: CATAAGCAGGAGACATGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510726.1
CDS TCA 72 bp AAGGGCAGAGCTGGCTTCTGGTGTGAACCTCCTCCATaGTGGAGGCAAGAGTCTCCTCAGTTAGAACAGACC +
Preference number: 6 (lower is better)
Translates to: KGRAGFWCEPPP*WRQESPQLEQT
Trigger: GGTCTGTTCTAACTGAGGAGACTCTTGCCTCCATCATGGAGGAGGTTCACACCAGAAGCCAGCTCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636289.1
CDS GCA 72 bp ACAGCAGCTACAATTGTACACCAGAGGTGGAACCTCTaGGGCTGGCGGCCCGGGAACATCAGAAGATTGATT +
Preference number: 6 (lower is better)
Translates to: TAATIVHQRWNL*GWRPGNIRRLI
Trigger: AATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp GGTTTCCTCCAGGAATGGGCATGTGGCTTGACCTCATaGAGATCTGTTCATGCCGATCCAACCTGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: GFLQEWACGLTS*RSVHADPTCSG
Trigger: CCCTGAACAGGTTGGATCGGCATGAACAGATCTGCATGAGGTCAAGCCACATGCCCATTCCTGGAGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp AGGGCGCCACGGTTTGTCAGTGGAATCCTGGTCACTTaGGTCATCGAACACTTCACTCATCTCCATGCACTC +
Preference number: 6 (lower is better)
Translates to: RAPRFVSGILVT*VIEHFTHLHAL
Trigger: GAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCACTGACAAACCGTGGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp ATCCTGAGGAGCCTTCCCCACGGCGCAATCCAGTTCTaGTGGGTATTTACATTTATGGCTCGGGCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: ILRSLPHGAIQF*WVFTFMARAPV
Trigger: AACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp CCCAGGTGGATGCGTTCATGTTTCTGTAAGTTTCCTTaGACCGAAAAGCACCGTCCGCAGGTCTTGCACTGG +
Preference number: 6 (lower is better)
Translates to: PRWMRSCFCKFP*TEKHRPQVLHW
Trigger: CCAGTGCAAGACCTGCGGACGGTGCTTTTCGGTGCAAGGAAACTTACAGAAACATGAACGCATCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp TCATCGAACACTTCACTCATCTCCATGCACTCGGATTaGCAAAGCCCGAGTGGGCTGTCTCCACTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: SSNTSLISMHSD*QSPSGLSPLGS
Trigger: AGAACCCAGTGGAGACAGCCCACTCGGGCTTTGCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp ACGGCGCAATCCAGTTCTGCTGGGTATTTACATTTATaGCTCGGGCTCCTGTTTCCGTGCTCCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TAQSSSAGYLHL*LGLLFPCSFLQ
Trigger: CTGGAGGAAGGAGCACGGAAACAGGAGCCCGAGCCATAAATGTAAATACCCAGCAGAACTGGATTGCGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp GCTCTGTGGTTGCTGCTGGTCATGGCAGCAATGGCATaGCTGTGCATGATCACCGATGAAAACTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ALWLLLVMAAMA*LCMITDENWLL
Trigger: CAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGCTGCCATGACCAGCAGCAACCACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp ATATGGCCGAGAAGTAAGATGTCGGTGGGGCCTTCCTaGGTTTCCAGCCCCCACTGCTTTGTCTCCATCACA +
Preference number: 6 (lower is better)
Translates to: IWPRSKMSVGPS*VSSPHCFVSIT
Trigger: TGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTACTTCTCGGCCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp ATGTGCATTTTGAGTGTGGAAGGGCTCTGGAACTGCTaGGCGCAGAGCTCGCAGGCATATGGCCGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: MCILSVEGLWNC*AQSSQAYGREV
Trigger: TACTTCTCGGCCATATGCCTGCGAGCTCTGCGCCAAGCAGTTCCAGAGCCCTTCCACACTCAAAATGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp AAGGTTCAGGGTGCACTTGTCATTGGAGGGGTAGGCTaGGATGTGGGTCCTTTTCTACCGACAGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: KVQGALVIGGVG*DVGPFLPTALR
Trigger: CCTCAGTGCTGTCGGTAGAAAAGGACCCACATCCAAGCCTACCCCTCCAATGACAAGTGCACCCTGAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CAA 90 bp GTAAGATGTCGGTGGGGCCTTCCTTGGTTTCCAGCCCCCACTGCTTaGTCTCCATCACAGAGTTCACACTGCAGCTTGGGCATCTCTTTA +
Preference number: 6 (lower is better)
Translates to: VRCRWGLPWFPAPTA*SPSQSSHCSLGISL
Trigger: TAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGCTGGAAACCAAGGAAGGCCCCACCGACATCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp CATGGCAGCAATGGCATTGCTGTGCATGATCACCGATaGAAACTGGCTGCTGTGTACAATGACCGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: HGSNGIAVHDHR*KLAAVYNDRGC
Trigger: GCACCCTCGGTCATTGTACACAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGCTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp AGTCCATACTGGGCCAGCACAGGGGCCATATCAAAGTaGAATCTACTGCGCAGGTCTGTTATTCCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: SPYWASTGAISK*NLLRRSVIPCG
Trigger: TCCGCAGGGAATAACAGACCTGCGCAGTAGATTTCACTTTGATATGGCCCCTGTGCTGGCCCAGTATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS GCA 72 bp GGGCCAGCACAGGGGCCATATCAAAGTGAAATCTACTaGGCAGGTCTGTTATTCCCTGCGGAAAGTTTTCCG +
Preference number: 6 (lower is better)
Translates to: GPAQGPYQSEIY*AGLLFPAESFP
Trigger: CGGAAAACTTTCCGCAGGGAATAACAGACCTGCGCAGTAGATTTCACTTTGATATGGCCCCTGTGCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS CCA 72 bp GCTACAATTGTACACCAGAGGTGGAACCTCTGCGGCTaGCGGCCCGGGAACATCAGAAGATTGATTTTCATC +
Preference number: 6 (lower is better)
Translates to: ATIVHQRWNLCG*RPGNIRRLIFI
Trigger: GATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGGTGTACAATTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp GCAATGGCATTGCTGTGCATGATCACCGATGAAAACTaGCTGCTGTGTACAATGACCGAGGGTGCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: AMALLCMITDEN*LLCTMTEGAEP
Trigger: TGGCTCTGCACCCTCGGTCATTGTACACAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp GCAGTCCTGTTGGCAAAGATTGGGCAGCAAGCCTTGTaGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAA +
Preference number: 6 (lower is better)
Translates to: AVLLAKIGQQAL*TKLGLLSRKEQ
Trigger: TTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS CAA 90 bp AGTTGTAGTAAGGGCGCCACGGTTTGTCAGTGGAATCCTGGTCACTaGCGTCATCGAACACTTCACTCATCTCCATGCACTCGGATTGGC +
Preference number: 6 (lower is better)
Translates to: SCSKGATVCQWNPGH*RHRTLHSSPCTRIG
Trigger: GCCAATCCGAGTGCATGGAGATGAGTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCACTGACAAACCGTGGCGCCCTTACTACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 90 bp ATTTCCACAAAGGTTCAGGGTGCACTTGTCATTGGAGGGGTAGGCTaGGATGTGGGTCCTTTTCTACCGACAGCACTGAGGTTACCAACG +
Preference number: 6 (lower is better)
Translates to: ISTKVQGALVIGGVG*DVGPFLPTALRLPT
Trigger: CGTTGGTAACCTCAGTGCTGTCGGTAGAAAAGGACCCACATCCAAGCCTACCCCTCCAATGACAAGTGCACCCTGAACCTTTGTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS TCA 72 bp CGCTGCTCATTTAAGATGGAGAGTACCGTGTCACTGTaGAAGTCGTCCTTGAGGTCCCTGGAAAGGGACATG +
Preference number: 6 (lower is better)
Translates to: RCSFKMESTVSL*KSSLRSLERDM
Trigger: CATGTCCCTTTCCAGGGACCTCAAGGACGACTTTCACAGTGACACGGTACTCTCCATCTTAAATGAGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000503809.5
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp AAAGCGTTGGTTTCCTCCAGGAATGGGCATGTGGCTTaGCCTCATGCAGATCTGTTCATGCCGATCCAACCT +
Preference number: 6 (lower is better)
Translates to: KALVSSRNGHVA*PHADLFMPIQP
Trigger: AGGTTGGATCGGCATGAACAGATCTGCATGAGGTCAAGCCACATGCCCATTCCTGGAGGAAACCAACGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp TTATCTGGCTCGGGCTTACTGTCATCTTTCAGGGACTaGCTGACAGCTGGGTCTGAAAAGGCTCTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: LSGSGLLSSFRD*LTAGSEKALWL
Trigger: CAACCACAGAGCCTTTTCAGACCCAGCTGTCAGTCAGTCCCTGAAAGATGACAGTAAGCCCGAGCCAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS TCA 72 bp AAGTCATGTTGGGTGACTACGTCAGACCTCCTCACGTaGCGGGGTGTTAGAAACACACGCATCAGATCTCGA +
Preference number: 6 (lower is better)
Translates to: KSCWVTTSDLLT*RGVRNTRIRSR
Trigger: TCGAGATCTGATGCGTGTGTTTCTAACACCCCGTCACGTGAGGAGGTCTGACGTAGTCACCCAACATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS GCA 72 bp TGGTTGCTGCTGGTCATGGCAGCAATGGCATTGCTGTaGATGATCACCGATGAAAACTGGCTGCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: WLLLVMAAMALL*MITDENWLLCT
Trigger: TGTACACAGCAGCCAGTTTTCATCGGTGATCATGCACAGCAATGCCATTGCTGCCATGACCAGCAGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp TGTTGTATGTTGTACCAACAGAGCAGACCTTACTACTaGAGAAGTAGGCGGCTGAGACTGCAAACCCCTGGG +
Preference number: 6 (lower is better)
Translates to: CCMLYQQSRPYY*RSRRLRLQTPG
Trigger: CCCAGGGGTTTGCAGTCTCAGCCGCCTACTTCTGCAGTAGTAAGGTCTGCTCTGTTGGTACAACATACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS GCA 72 bp CATGACTGTCATCTGGAATCCTGCAAAAGTCAAACCTaGAGTCCATACTGGGCCAGCACAGGGGCCATATCA +
Preference number: 6 (lower is better)
Translates to: HDCHLESCKSQT*SPYWASTGAIS
Trigger: TGATATGGCCCCTGTGCTGGCCCAGTATGGACTGCAGGTTTGACTTTTGCAGGATTCCAGATGACAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS CAA 72 bp TGGCTGAATCCGAATCCTGTGGTATGGAGAATGTCTTaGGCTTCCGGCATGTTTTCGGTTTCGCTGCAAGGG +
Preference number: 6 (lower is better)
Translates to: WLNPNPVVWRMS*ASGMFSVSLQG
Trigger: CCCTTGCAGCGAAACCGAAAACATGCCGGAAGCCAAAGACATTCTCCATACCACAGGATTCGGATTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp AACCTCTGCGGCTGGCGGCCCGGGAACATCAGAAGATaGATTTTCATCTTCCCTGGAAAAATGGACATCTCC +
Preference number: 6 (lower is better)
Translates to: NLCGWRPGNIRR*IFIFPGKMDIS
Trigger: GGAGATGTCCATTTTTCCAGGGAAGATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp TTTGCAGTCCTGTTGGCAAAGATTGGGCAGCAAGCCTaGTGGACCAAACTGGGGTTACTCTCCAGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: FAVLLAKIGQQA*WTKLGLLSRKE
Trigger: CTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGGACTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS CAA 90 bp CAGAGGTGGAACCTCTGCGGCTGGCGGCCCGGGAACATCAGAAGATaGATTTTCATCTTCCCTGGAAAAATGGACATCTCCTTCATTGTT +
Preference number: 6 (lower is better)
Translates to: QRWNLCGWRPGNIRR*IFIFPGKMDISFIV
Trigger: AACAATGAAGGAGATGTCCATTTTTCCAGGGAAGATGAAAATCAATCTTCTGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp AGGGTCTCATTCAAGGTGAATGCCTTGTTGCAATACTaGCAGACGAACTCCTTCAAGCCCAGGTGGATGCGT +
Preference number: 6 (lower is better)
Translates to: RVSFKVNALLQY*QTNSFKPRWMR
Trigger: ACGCATCCACCTGGGCTTGAAGGAGTTCGTCTGTCAGTATTGCAACAAGGCATTCACCTTGAATGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp ATGGGCATGTGGCTTGACCTCATGCAGATCTGTTCATaGCGATCCAACCTGTTCAGGGTGGTGAATTGTTTG +
Preference number: 6 (lower is better)
Translates to: MGMWLDLMQICS*RSNLFRVVNCL
Trigger: CAAACAATTCACCACCCTGAACAGGTTGGATCGGCATGAACAGATCTGCATGAGGTCAAGCCACATGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp GCCCCCACTGCTTTGTCTCCATCACAGAGTTCACACTaGAGCTTGGGCATCTCTTTAGTTTCTTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: APTALSPSQSSH*SLGISLVSSSS
Trigger: TGAGGAAGAAGAAACTAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp AGAGAAAGGCCGTTGCCTCTTTATTTTGAGATTTGCTaGAGCTGCGAGTGCCACTCCCCAACTAGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: RERPLPLYFEIC*SCECHSPTSFL
Trigger: CAGGAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507657.1
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS GCA 72 bp GGAAGAGAAAGGCCGTTGCCTCTTTATTTTGAGATTTaGTGCAGCTGCGAGTGCCACTCCCCAACTAGTTTC +
Preference number: 6 (lower is better)
Translates to: GRERPLPLYFEI*CSCECHSPTSF
Trigger: GAAACTAGTTGGGGAGTGGCACTCGCAGCTGCAGCAAATCTCAAAATAAAGAGGCAACGGCCTTTCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507657.1
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS CCA 72 bp TGGCAAAGATTGGGCAGCAAGCCTTGTGGACCAAACTaGGGTTACTCTCCAGGAAAGAGCAAATTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: WQRLGSKPCGPN*GYSPGKSKLVV
Trigger: GACCACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS CCA 72 bp GTTCAACTGTTGGCAAAGATTGGGCAGCAAGCCTTGTaGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAA +
Preference number: 6 (lower is better)
Translates to: VQLLAKIGQQAL*TKLGLLSRKEQ
Trigger: TTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
CDS CCA 72 bp GCTTTTGGGTCTGCTTGCAAACCTACCCACTTTATCTaGCTCGGGCTTACTGTCATCTTTCAGGGACTGACT +
Preference number: 6 (lower is better)
Translates to: AFGSACKPTHFI*LGLTVIFQGLT
Trigger: AGTCAGTCCCTGAAAGATGACAGTAAGCCCGAGCCAGATAAAGTGGGTAGGTTTGCAAGCAGACCCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp GTTTGTAGTTGTAGTAAGGGCGCCACGGTTTGTCAGTaGAATCCTGGTCACTTGCGTCATCGAACACTTCAC +
Preference number: 6 (lower is better)
Translates to: VCSCSKGATVCQ*NPGHLRHRTLH
Trigger: GTGAAGTGTTCGATGACGCAAGTGACCAGGATTCCACTGACAAACCGTGGCGCCCTTACTACAACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp TTGGTTCAACTGTTGGCAAAGATTGGGCAGCAAGCCTaGTGGACCAAACTGGGGTTACTCTCCAGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: LVQLLAKIGQQA*WTKLGLLSRKE
Trigger: CTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGTTGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
CDS CAA 72 bp TGCCGATCCAACCTGTTCAGGGTGGTGAATTGTTTGTaGCAATACTTGCACACTAAAGGCTCCTGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: CRSNLFRVVNCL*QYLHTKGSWVG
Trigger: GCCAACCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACAATTCACCACCCTGAACAGGTTGGATCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp CAATGCCTCCTCTCCCCATTTGGTACCCTCTGCATTTaGTACATTGGCAGAAGTGGGTATGTCCTGACATGC +
Preference number: 6 (lower is better)
Translates to: QCLLSPFGTLCI*YIGRSGYVLTC
Trigger: GCATGTCAGGACATACCCACTTCTGCCAATGTACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp CGAGTGAGAACAGCAGCTGGTTGTGGACTTCTTTCTTaGTTAACCTCTAAGTTGGATACTGGAGGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: RVRTAAGCGLLS*LTSKLDTGGGG
Trigger: ACCACCCCCTCCAGTATCCAACTTAGAGGTTAATCAAGAAAGAAGTCCACAACCAGCTGCTGTTCTCACTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp ATCTCTTTAGTTTCTTCTTCCTCAAAGGGTTTATCCTaGGGAGCCTTCCCCACGGCGCAATCCAGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: ISLVSSSSKGLS*GAFPTAQSSSA
Trigger: AGCAGAACTGGATTGCGCCGTGGGGAAGGCTCCTCAGGATAAACCCTTTGAGGAAGAAGAAACTAAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp AGAAGTGGGTATGTCCTGACATGCAGATGTTTCCAATaGGATGGCTGGACTGTTGGTCAGGGTGTTTACAGT +
Preference number: 6 (lower is better)
Translates to: RSGYVLTCRCFQ*DGWTVGQGVYS
Trigger: ACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 90 bp CTCAGAGTCTTGGTTCAACTGTTGGCAAAGATTGGGCAGCAAGCCTaGTGGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAAATTAGT +
Preference number: 6 (lower is better)
Translates to: LRVLVQLLAKIGQQA*WTKLGLLSRKEQIS
Trigger: ACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGTTGAACCAAGACTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
CDS CAA 90 bp TATTTTCTGTGGCTGAATCCGAATCCTGTGGTATGGAGAATGTCTTaGGCTTCCGGCATGTTTTCGGTTTCGCTGCAAGGGCTTCACAAT +
Preference number: 6 (lower is better)
Translates to: YFLWLNPNPVVWRMS*ASGMFSVSLQGLHN
Trigger: ATTGTGAAGCCCTTGCAGCGAAACCGAAAACATGCCGGAAGCCAAAGACATTCTCCATACCACAGGATTCGGATTCAGCCACAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp GTTGGATACTGGAGGGGGTGGTATATTTTCTGTGGCTaGATCCGAATCCTGTGGTATGGAGAATGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: VGYWRGWYIFCG*IRILWYGECLW
Trigger: CCAAAGACATTCTCCATACCACAGGATTCGGATTCAGCCACAGAAAATATACCACCCCCTCCAGTATCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp GAATGTCTTTGGCTTCCGGCATGTTTTCGGTTTCGCTaGAAGGGCTTCACAATTTTCTTTCCCTGTGTTACC +
Preference number: 6 (lower is better)
Translates to: ECLWLPACFRFR*KGFTIFFPCVT
Trigger: GGTAACACAGGGAAAGAAAATTGTGAAGCCCTTGCAGCGAAACCGAAAACATGCCGGAAGCCAAAGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp GACATGCAGATGTTTCCAATGGGATGGCTGGACTGTTaGTCAGGGTGTTTACAGTATCTTGGAAATTCAGCG +
Preference number: 6 (lower is better)
Translates to: DMQMFPMGWLDC*SGCLQYLGNSA
Trigger: CGCTGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp TGGGTATGTCCTGACATGCAGATGTTTCCAATGGGATaGCTGGACTGTTGGTCAGGGTGTTTACAGTATCTT +
Preference number: 6 (lower is better)
Translates to: WVCPDMQMFPMG*LDCWSGCLQYL
Trigger: AAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp CTGTTATTTGGCAAAGGGGTGCAACATTACTATTTGTaGAGGTTCCCGGCAGAGCAGGTTTTGCAATGTAGG +
Preference number: 6 (lower is better)
Translates to: LLFGKGVQHYYL*RFPAEQVLQCR
Trigger: CCTACATTGCAAAACCTGCTCTGCCGGGAACCTCCACAAATAGTAATGTTGCACCCCTTTGCCAAATAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp TCATGCCGATCCAACCTGTTCAGGGTGGTGAATTGTTaGTTGCAATACTTGCACACTAAAGGCTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: SCRSNLFRVVNC*LQYLHTKGSWV
Trigger: AACCCAGGAGCCTTTAGTGTGCAAGTATTGCAACAAACAATTCACCACCCTGAACAGGTTGGATCGGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp TTTTGCTCAGTGATCCTCCAGGATCAGCAACATAGTTaGACTCCTCCGGTATTTCTCCCCTGGTATGTGATG +
Preference number: 6 (lower is better)
Translates to: FCSVILQDQQHS*TPPVFLPWYVM
Trigger: CATCACATACCAGGGGAGAAATACCGGAGGAGTCAAACTATGTTGCTGATCCTGGAGGATCACTGAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 90 bp ATCCATTTTCAATGCCTCCTCTCCCCATTTGGTACCCTCTGCATTTaGTACATTGGCAGAAGTGGGTATGTCCTGACATGCAGATGTTTC +
Preference number: 6 (lower is better)
Translates to: IHFQCLLSPFGTLCI*YIGRSGYVLTCRCF
Trigger: GAAACATCTGCATGTCAGGACATACCCACTTCTGCCAATGTACAAAATGCAGAGGGTACCAAATGGGGAGAGGAGGCATTGAAAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 90 bp CTAATTTTCTTTGCAGTCCTGTTGGCAAAGATTGGGCAGCAAGCCTaGTGGACCAAACTGGGGTTACTCTCCAGGAAAGAGCAAATTAGT +
Preference number: 6 (lower is better)
Translates to: LIFFAVLLAKIGQQA*WTKLGLLSRKEQIS
Trigger: ACTAATTTGCTCTTTCCTGGAGAGTAACCCCAGTTTGGTCCACAAGGCTTGCTGCCCAATCTTTGCCAACAGGACTGCAAAGAAAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS TCA 72 bp ACAACCGCTTTCGTGCTCTGGGTTCTTCACTTCTTGTaGTCAGCTCCACATATTTTTCTGATGATGTCACCC +
Preference number: 6 (lower is better)
Translates to: TTAFVLWVLHFL*SAPHIFLMMSP
Trigger: GGGTGACATCATCAGAAAAATATGTGGAGCTGATCACAAGAAGTGAAGAACCCAGAGCACGAAAGCGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000507657.1
ENST00000509842.5
ENST00000512276.5
ENST00000513619.5
ENST00000637706.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATGGGGCTC +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKMGL
Trigger: GAGCCCCATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504673.5
ENST00000510338.5
CDS TCA 72 bp GCGGAAAGTTTTCCGACAAAGGATATTTTGCTTCAGTaGGCTGGCTGTACCATCCCACACACATCTTTACAG +
Preference number: 6 (lower is better)
Translates to: AESFPTKDILLQ*AGCTIPHTSLQ
Trigger: CTGTAAAGATGTGTGTGGGATGGTACAGCCAGCTCACTGAAGCAAAATATCCTTTGTCGGAAAACTTTCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS TCA 72 bp TGGTTCAATTGCTCGTGGTCTCGTTGTTCTGCAGGCTaGGCTAATTTTCTTTGCAGTCCTGTTGGCAAAGAT +
Preference number: 6 (lower is better)
Translates to: WFNCSWSRCSAG*ANFLCSPVGKD
Trigger: ATCTTTGCCAACAGGACTGCAAAGAAAATTAGCTCAGCCTGCAGAACAACGAGACCACGAGCAATTGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS GCA 72 bp AATACTGACAGACGAACTCCTTCAAGCCCAGGTGGATaGGTTCATGTTTCTGTAAGTTTCCTTGCACCGAAA +
Preference number: 6 (lower is better)
Translates to: NTDRRTPSSPGG*VHVSVSFLAPK
Trigger: TTTCGGTGCAAGGAAACTTACAGAAACATGAACGCATCCACCTGGGCTTGAAGGAGTTCGTCTGTCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS GCA 72 bp TATTCCCTGCGGAAAGTTTTCCGACAAAGGATATTTTaGTTCAGTGAGCTGGCTGTACCATCCCACACACAT +
Preference number: 6 (lower is better)
Translates to: YSLRKVFRQRIF*FSELAVPSHTH
Trigger: ATGTGTGTGGGATGGTACAGCCAGCTCACTGAAGCAAAATATCCTTTGTCGGAAAACTTTCCGCAGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS CCA 72 bp CTAAGTTGGATACTGGAGGGGGTGGTATATTTTCTGTaGCTGAATCCGAATCCTGTGGTATGGAGAATGTCT +
Preference number: 6 (lower is better)
Translates to: LSWILEGVVYFL*LNPNPVVWRMS
Trigger: AGACATTCTCCATACCACAGGATTCGGATTCAGCCACAGAAAATATACCACCCCCTCCAGTATCCAACTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp ATGGCTGGACTGTTGGTCAGGGTGTTTACAGTATCTTaGAAATTCAGCGTTGGTAATTCAGAGCTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: MAGLLVRVFTVS*KFSVGNSELCG
Trigger: TCCACACAGCTCTGAATTACCAACGCTGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp TATGTCCTGACATGCAGATGTTTCCAATGGGATGGCTaGACTGTTGGTCAGGGTGTTTACAGTATCTTGGAA +
Preference number: 6 (lower is better)
Translates to: YVLTCRCFQWDG*TVGQGVYSILE
Trigger: TTCCAAGATACTGTAAACACCCTGACCAACAGTCCAGCCATCCCATTGGAAACATCTGCATGTCAGGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp GCTCCCGAATATGCCTCTGCTCGTGATTCCTTTTGGTaGAGAGATACAAAAATCTCTGAAAGCAGAACTGAC +
Preference number: 6 (lower is better)
Translates to: APEYASARDSFW*RDTKISESRTD
Trigger: GTCAGTTCTGCTTTCAGAGATTTTTGTATCTCTCCACCAAAAGGAATCACGAGCAGAGGCATATTCGGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CCA 72 bp GATCAGGAGTTTGGAAGATGTTGGTTCCAACCCTCATaGATGACTTTGAGAGATTCAAGACTTCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: DQEFGRCWFQPS*MTLRDSRLQWR
Trigger: CCTCCACTGAAGTCTTGAATCTCTCAAAGTCATCCATGAGGGTTGGAACCAACATCTTCCAAACTCCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS CAA 72 bp TCACTGTTATTTGGCAAAGGGGTGCAACATTACTATTaGTGGAGGTTCCCGGCAGAGCAGGTTTTGCAATGT +
Preference number: 6 (lower is better)
Translates to: SLLFGKGVQHYY*WRFPAEQVLQC
Trigger: ACATTGCAAAACCTGCTCTGCCGGGAACCTCCACAAATAGTAATGTTGCACCCCTTTGCCAAATAACAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp ACTGCTTTGTCTCCATCACAGAGTTCACACTGCAGCTaGGGCATCTCTTTAGTTTCTTCTTCCTCAAAGGGT +
Preference number: 6 (lower is better)
Translates to: TALSPSQSSHCS*GISLVSSSSKG
Trigger: ACCCTTTGAGGAAGAAGAAACTAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGATGGAGACAAAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 90 bp CTGGACTGTTGGTCAGGGTGTTTACAGTATCTTGGAAATTCAGCGTaGGTAATTCAGAGCTGTGTGGATTCTGAACAACATAGGTACCAG +
Preference number: 6 (lower is better)
Translates to: LDCWSGCLQYLGNSA*VIQSCVDSEQHRYQ
Trigger: CTGGTACCTATGTTGTTCAGAATCCACACAGCTCTGAATTACCAACGCTGAATTTCCAAGATACTGTAAACACCCTGACCAACAGTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTACCGC +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKIYR
Trigger: GCGGTAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS TCA 72 bp CATCTTTACAGTATATTTTCTCAAAGTCATGTTGGGTaGCTACGTCAGACCTCCTCACGTGACGGGGTGTTA +
Preference number: 6 (lower is better)
Translates to: HLYSIFSQSHVG*LRQTSSRDGVL
Trigger: TAACACCCCGTCACGTGAGGAGGTCTGACGTAGTCACCCAACATGACTTTGAGAAAATATACTGTAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509813.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKICC
Trigger: GCAGCAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637056.1
CDS GCA 72 bp CTTCACAATTTTCTTTCCCTGTGTTACCAGGTGAACTaGCATCATGTTCACGTACAGGCTGACTTCTGTAAG +
Preference number: 6 (lower is better)
Translates to: LHNFLSLCYQVN*HHVHVQADFCK
Trigger: CTTACAGAAGTCAGCCTGTACGTGAACATGATGGCAGTTCACCTGGTAACACAGGGAAAGAAAATTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp GTATATTTTCTGTGGCTGAATCCGAATCCTGTGGTATaGAGAATGTCTTTGGCTTCCGGCATGTTTTCGGTT +
Preference number: 6 (lower is better)
Translates to: VYFLWLNPNPVV*RMSLASGMFSV
Trigger: AACCGAAAACATGCCGGAAGCCAAAGACATTCTCCATACCACAGGATTCGGATTCAGCCACAGAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp CACATCAAGATCTACCGCAGTGCAGGAGTTATAAAGTaGAACCGCGGACAGACTAAAATCTCAGGTGATTTA +
Preference number: 6 (lower is better)
Translates to: HIKIYRSAGVIK*NRGQTKISGDL
Trigger: TAAATCACCTGAGATTTTAGTCTGTCCGCGGTTCCACTTTATAACTCCTGCACTGCGGTAGATCTTGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513570.1
CDS TCA 72 bp GGACATCTCCTTCATTGTTTGGAGATTTTGAACGAGTaGGAACAGCAGCTGGTTGTGGACTTCTTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GHLLHCLEILNE*EQQLVVDFFLD
Trigger: ATCAAGAAAGAAGTCCACAACCAGCTGCTGTTCTCACTCGTTCAAAATCTCCAAACAATGAAGGAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp GGAAAAATGGACATCTCCTTCATTGTTTGGAGATTTTaGACGAGTGAGAACAGCAGCTGGTTGTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: GKMDISFIVWRF*TSENSSWLWTS
Trigger: AGAAGTCCACAACCAGCTGCTGTTCTCACTCGTTCAAAATCTCCAAACAATGAAGGAGATGTCCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCAGGAGT +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKIRS
Trigger: ACTCCTGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS GCA 72 bp ATTACTATTTGTGGAGGTTCCCGGCAGAGCAGGTTTTaGAATGTAGGTTTCAATTTTGCTGGTTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ITICGGSRQSRF*NVGFNFAGFFS
Trigger: GCTGAAGAAACCAGCAAAATTGAAACCTACATTGCAAAACCTGCTCTGCCGGGAACCTCCACAAATAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp CATTACTATTTGTGGAGGTTCCCGGCAGAGCAGGTTTaGCAATGTAGGTTTCAATTTTGCTGGTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: HYYLWRFPAEQV*QCRFQFCWFLQ
Trigger: CTGAAGAAACCAGCAAAATTGAAACCTACATTGCAAAACCTGCTCTGCCGGGAACCTCCACAAATAGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 90 bp AAATGCACTGATATCGTCTTTCTCCCGTATGCCAAATTTCATGCCTaGTCCTGTACTCAGCCAATGCAAATACTTTGTTGCAGTAATGGC +
Preference number: 6 (lower is better)
Translates to: KCTDIVFLPYAKFHA*SCTQPMQILCCSNG
Trigger: GCCATTACTGCAACAAAGTATTTGCATTGGCTGAGTACAGGACAAGGCATGAAATTTGGCATACGGGAGAAAGACGATATCAGTGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS TCA 72 bp AGTCTTGGTTCAAACTTAAGCAGAGCTGCTCCACAATaGATGTGTCCTTCTGCTTCTGAGAATCAAACAATC +
Preference number: 6 (lower is better)
Translates to: SLGSNLSRAAPQ*MCPSASENQTI
Trigger: GATTGTTTGATTCTCAGAAGCAGAAGGACACATTCATTGTGGAGCAGCTCTGCTTAAGTTTGAACCAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503809.5
ENST00000512327.1
CDS TCA 72 bp ACCTACCTGTATGCATCACTTAATGCAGTGCTAGCATaGCAAGACACTCAGCCATTTTTATGTAAAGCGATG +
Preference number: 6 (lower is better)
Translates to: TYLYASLNAVLA*QDTQPFLCKAM
Trigger: CATCGCTTTACATAAAAATGGCTGAGTGTCTTGTCATGCTAGCACTGCATTAAGTGATGCATACAGGTAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTGTATG +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKICM
Trigger: CATACAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506623.1
ENST00000509883.5
ENST00000514251.5
CDS TCA 72 bp AGGCATTTCATACACTTAAGCAGAGCTGCTCCACAATaGATGTGTCCTTCTGCTTCTGAGAATCAAACAATC +
Preference number: 6 (lower is better)
Translates to: RHFIHLSRAAPQ*MCPSASENQTI
Trigger: GATTGTTTGATTCTCAGAAGCAGAAGGACACATTCATTGTGGAGCAGCTCTGCTTAAGTGTATGAAATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513249.1
CDS CCA 72 bp TTCTGTTTCGATGATGGAAAATGCATTTGTGATCCTTaGCCCATTAGTGATGGCTGGTTCTTCATGCCTTTT +
Preference number: 6 (lower is better)
Translates to: FCFDDGKCICDP*PISDGWFFMPF
Trigger: AAAAGGCATGAAGAACCAGCCATCACTAATGGGCCAAGGATCACAAATGCATTTTCCATCATCGAAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000510726.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp TTGCCCATTAACAAATTTAACCATGTGGTCCGTGTCTaGCAAAGTACTTCCGGTACTGGAAAATTCACCAAT +
Preference number: 6 (lower is better)
Translates to: LPINKFNHVVRV*QSTSGTGKFTN
Trigger: ATTGGTGAATTTTCCAGTACCGGAAGTACTTTGCCAGACACGGACCACATGGTTAAATTTGTTAATGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CCA 72 bp CATGACAAGACACTCAGCCATTTTTATGTAAAGCGATaGAGACCAACTGATTTCTCTGTCTTCTTGCTCACA +
Preference number: 6 (lower is better)
Translates to: HDKTLSHFYVKR*RPTDFSVFLLT
Trigger: TGTGAGCAAGAAGACAGAGAAATCAGTTGGTCTCCATCGCTTTACATAAAAATGGCTGAGTGTCTTGTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506623.1
ENST00000507657.1
ENST00000509883.5
ENST00000637706.1
CDS CCA 72 bp TTTCTTCCACATCAAGATCAGGAGTTTGGAAGATGTTaGTTCCAACCCTCATGGATGACTTTGAGAGATTCA +
Preference number: 6 (lower is better)
Translates to: FLPHQDQEFGRC*FQPSWMTLRDS
Trigger: TGAATCTCTCAAAGTCATCCATGAGGGTTGGAACCAACATCTTCCAAACTCCTGATCTTGATGTGGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS CAA 72 bp ATAACTACGTTTGCACACAACGCAACTGTAGAGCATTaGCCCATTAACAAATTTAACCATGTGGTCCGTGTC +
Preference number: 6 (lower is better)
Translates to: ITTFAHNATVEH*PINKFNHVVRV
Trigger: GACACGGACCACATGGTTAAATTTGTTAATGGGCAAATGCTCTACAGTTGCGTTGTGTGCAAACGTAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp TGGTCAGGGTGTTTACAGTATCTTGGAAATTCAGCGTaGGTAATTCAGAGCTGTGTGGATTCTGAACAACAT +
Preference number: 6 (lower is better)
Translates to: WSGCLQYLGNSA*VIQSCVDSEQH
Trigger: ATGTTGTTCAGAATCCACACAGCTCTGAATTACCAACGCTGAATTTCCAAGATACTGTAAACACCCTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp ACGAAGAAAGGAGAGACACCATCTGGTAGCAGAGTTTaGTTGTTGTTGTTTTTGTTTTTAGGGTTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: TKKGETPSGSRV*LLLFLFLGFVG
Trigger: CCCCACAAACCCTAAAAACAAAAACAACAACAACAAAACTCTGCTACCAGATGGTGTCTCTCCTTTCTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000512327.1
CDS CAA 72 bp CTTGTGATAATGAAACTACACCTCTGTACACAAACCTaGACCTGCATTCTGGAGCATACTGCAAAGAAAACC +
Preference number: 6 (lower is better)
Translates to: LVIMKLHLCTQT*TCILEHTAKKT
Trigger: GGTTTTCTTTGCAGTATGCTCCAGAATGCAGGTCAAGGTTTGTGTACAGAGGTGTAGTTTCATTATCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CAA 72 bp ATTTCTTCCACATCAAGATCAGGAGTTTGGAAGATGTaGGTTCCAACCCTCATGGATGACTTTGAGAGATTC +
Preference number: 6 (lower is better)
Translates to: ISSTSRSGVWKM*VPTLMDDFERF
Trigger: GAATCTCTCAAAGTCATCCATGAGGGTTGGAACCAACATCTTCCAAACTCCTGATCTTGATGTGGAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS CAA 90 bp GTGTGGATTCTGAACAACATAGGTACCAGGTGCAGACTCATTCATTaGACTGTTTTCTCGTGCATTTTCATAGGAAGAATTTCGGTAGCT +
Preference number: 6 (lower is better)
Translates to: VWILNNIGTRCRLIH*TVFSCIFIGRISVA
Trigger: AGCTACCGAAATTCTTCCTATGAAAATGCACGAGAAAACAGTCAAATGAATGAGTCTGCACCTGGTACCTATGTTGTTCAGAATCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 90 bp GCTGGTGAACTTGTGATAATGAAACTACACCTCTGTACACAAACCTaGACCTGCATTCTGGAGCATACTGCAAAGAAAACCTTAATTTTG +
Preference number: 6 (lower is better)
Translates to: AGELVIMKLHLCTQT*TCILEHTAKKTLIL
Trigger: CAAAATTAAGGTTTTCTTTGCAGTATGCTCCAGAATGCAGGTCAAGGTTTGTGTACAGAGGTGTAGTTTCATTATCACAAGTTCACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS GCA 72 bp TTAGAACAGACCAGCTTTAACAGAGTGAGATTCCTGTaGTTTGGAAGAAATCACTTGGAAATCCTTGGTTCT +
Preference number: 6 (lower is better)
Translates to: LEQTSFNRVRFL*FGRNHLEILGS
Trigger: AGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCACAGGAATCTCACTCTGTTAAAGCTGGTCTGTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000321464.7
ENST00000503809.5
ENST00000504673.5
ENST00000507722.5
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000512276.5
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS GCA 72 bp CAATTTTGCTGGTTTCTTCAGCAATATTTGTGGTTTTaGTCAGTGATCCTCCAGGATCAGCAACATAGTTTG +
Preference number: 6 (lower is better)
Translates to: QFCWFLQQYLWF*SVILQDQQHSL
Trigger: CAAACTATGTTGCTGATCCTGGAGGATCACTGAGCAAAACCACAAATATTGCTGAAGAAACCAGCAAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp GTAAAGCGATGGAGACCAACTGATTTCTCTGTCTTCTaGCTCACAAGTTTTAGATGCAATTGTCACATACAC +
Preference number: 6 (lower is better)
Translates to: VKRWRPTDFSVF*LTSFRCNCHIH
Trigger: GTGTATGTGACAATTGCATCTAAAACTTGTGAGCAAGAAGACAGAGAAATCAGTTGGTCTCCATCGCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000506623.1
ENST00000507657.1
ENST00000509883.5
ENST00000637706.1
CDS TCA 72 bp GTGCTTTGGAAGAAATCACTTGGAAATCCTTGGTTCTaGGTCCTCCATTTCTTCCACATCAAGATCTTAAAT +
Preference number: 6 (lower is better)
Translates to: VLWKKSLGNPWF*VLHFFHIKILN
Trigger: ATTTAAGATCTTGATGTGGAAGAAATGGAGGACTCAGAACCAAGGATTTCCAAGTGATTTCTTCCAAAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000321464.7
ENST00000503809.5
ENST00000507722.5
ENST00000512276.5
ENST00000513249.1
ENST00000513258.5
ENST00000636289.1
CDS TCA 72 bp GGTATTTCATGGCAAGCCTGGAGAACAAAATCAGTATaGGATGAATCACGTTCCAAAATAATTGAACCAGAG +
Preference number: 6 (lower is better)
Translates to: GISWQAWRTKSV*DESRSKIIEPE
Trigger: CTCTGGTTCAATTATTTTGGAACGTGATTCATCTCATACTGATTTTGTTCTCCAGGCTTGCCATGAAATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CCA 72 bp TTCACAATGGCTTCGTTTCCAATTTTCACTGTTATTTaGCAAAGGGGTGCAACATTACTATTTGTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: FTMASFPIFTVI*QRGATLLFVEV
Trigger: AACCTCCACAAATAGTAATGTTGCACCCCTTTGCCAAATAACAGTGAAAATTGGAAACGAAGCCATTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000514251.5
ENST00000637056.1
CDS CAA 72 bp CTGAACAACATAGGTACCAGGTGCAGACTCATTCATTaGACTGTTTTCTCGTGCATTTTCATAGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: LNNIGTRCRLIH*TVFSCIFIGRI
Trigger: AATTCTTCCTATGAAAATGCACGAGAAAACAGTCAAATGAATGAGTCTGCACCTGGTACCTATGTTGTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000509883.5
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp GGCTCATTATTTGCTCAAGAGCGAATGACAATTAGCTaGATCCTATTGCAACTGTTAATGCTGTTGGTACTA +
Preference number: 6 (lower is better)
Translates to: GSLFAQERMTIS*ILLQLLMLLVL
Trigger: TAGTACCAACAGCATTAACAGTTGCAATAGGATCAAGCTAATTGTCATTCGCTCTTGAGCAAATAATGAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CAA 72 bp TTCTTCACAATGATAACCTTCCAATCTTCGATAACCTaGGGTTTCCATCTTGCACTAAATCTCTTGGACAGT +
Preference number: 6 (lower is better)
Translates to: FFTMITFQSSIT*GFHLALNLLDS
Trigger: ACTGTCCAAGAGATTTAGTGCAAGATGGAAACCCAAGGTTATCGAAGATTGGAAGGTTATCATTGTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512769.1
CDS CCA 72 bp TTAAAATACAGGCTTGAAGCTGCCAGAACATTGCTATaGGCTTTAAATTTGGTATCTTCCACAATGATAGTG +
Preference number: 6 (lower is better)
Translates to: LKYRLEAARTLL*ALNLVSSTMIV
Trigger: CACTATCATTGTGGAAGATACCAAATTTAAAGCCCATAGCAATGTTCTGGCAGCTTCAAGCCTGTATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1
CDS CAA 72 bp ACTGCTAGAATAAAGCAGCCATTTACACAGATGGTTTaGAATCTCAATGTTCTTCACATTGAAGCAAACCTC +
Preference number: 6 (lower is better)
Translates to: TARIKQPFTQMV*NLNVLHIEANL
Trigger: GAGGTTTGCTTCAATGTGAAGAACATTGAGATTCAAAACCATCTGTGTAAATGGCTGCTTTATTCTAGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507657.1
ENST00000637706.1
CDS CCA 72 bp ATTATAAAACTTGATCAGATGAGGAGTTGCTTCTTATaGATGAGCAAAGAAACTGGTTTCTTGAGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: IIKLDQMRSCFL*MSKETGFLRWN
Trigger: ATTCCACCTCAAGAAACCAGTTTCTTTGCTCATCCATAAGAAGCAACTCCTCATCTGATCAAGTTTTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS TCA 72 bp GATGAGACTGAATTTCTGCAATCTTATTATAAAACTTaGTCAGATGAGGAGTTGCTTCTTATGGATGAGCAA +
Preference number: 6 (lower is better)
Translates to: DETEFLQSYYKT*SDEELLLMDEQ
Trigger: TTGCTCATCCATAAGAAGCAACTCCTCATCTGATCAAGTTTTATAATAAGATTGCAGAAATTCAGTCTCATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509842.5
CDS GCA 72 bp CCATTAAGTATGAAAATCTACAAGATGACGCAACCATaGTTGAGTCACAAACAAAAGAATCGACATTCTATA +
Preference number: 6 (lower is better)
Translates to: PLSMKIYKMTQP*LSHKQKNRHSI
Trigger: TATAGAATGTCGATTCTTTTGTTTGTGACTCAAGCATGGTTGCGTCATCTTGTAGATTTTCATACTTAATGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637706.1
CDS CAA 72 bp ATATTTTTAAAATACAGGCTTGAAGCTGCCAGAACATaGCTATGGGCTTTAAATTTGGTATCTTCCACAATG +
Preference number: 6 (lower is better)
Translates to: IFLKYRLEAART*LWALNLVSSTM
Trigger: CATTGTGGAAGATACCAAATTTAAAGCCCATAGCAATGTTCTGGCAGCTTCAAGCCTGTATTTTAAAAATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000321464.7
ENST00000441582.2
ENST00000504673.5
ENST00000507722.5
ENST00000509813.1
ENST00000509842.5
ENST00000509883.5
ENST00000510338.5
ENST00000510726.1
ENST00000513258.5
ENST00000513570.1
ENST00000514251.5
ENST00000636289.1
ENST00000637056.1