RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB34 (Homo sapiens)

Ensembl gene IDs: ENSG00000177125

Ensembl transcript IDs: ENST00000319119.4, ENST00000373452.2

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAAGCATGACAGTGCGAACGCTCAGAGAGGCTACACAGCTCCGTaGTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAACTTTAC +
Preference number: 1 (lower is better)
Translates to: GKHDSANAQRGYTAP*WPRRCLPRSPAELY
Trigger: GTAAAGTTCCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTCTCTGAGCGTTCGCACTGTCATGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp ACGGACAATGCCAAGAGCCAGGACGCTGGAAGTGCCCGCGCCAGGTaGCCTCCCTCCTCACTGTCTCTCATACCATGGAATGCTCTGGAA +
Preference number: 1 (lower is better)
Translates to: TDNAKSQDAGSARAR*PPSSLSLIPWNALE
Trigger: TTCCAGAGCATTCCATGGTATGAGAGACAGTGAGGAGGGAGGGCACCTGGCGCGGGCACTTCCAGCGTCCTGGCTCTTGGCATTGTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp AAGCATGACAGTGCGAACGCTCAGAGAGGCTACACAGCTCCGTGCTaGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAACTTTACAGT +
Preference number: 1 (lower is better)
Translates to: KHDSANAQRGYTAPC*PRRCLPRSPAELYS
Trigger: ACTGTAAAGTTCCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTCTCTGAGCGTTCGCACTGTCATGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp GAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATaGGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: EFSQRGILSACVFPG*VALHALSSFGEGGQ
Trigger: CTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp TCTTTTAGGTGGCTGCACTGTTCTCCTATGGAGGTGCACTGGTTGTaGGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGAACGCTGAC +
Preference number: 1 (lower is better)
Translates to: SFRWLHCSPMEVHWL*VSEPRFSGRYQNAD
Trigger: GTCAGCGTTCTGGTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp CTGAATCTGCTACAAGGAGAGCCAGGCAAGGCTGACTCCAGGACTTaGTCAAGAACTACAATAGCCCCGTCTGTGCCAGACTCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: LNLLQGEPGKADSRT*SRTTIAPSVPDSGR
Trigger: CCTTCCTGAGTCTGGCACAGACGGGGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCTCCTTGTAGCAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp AGAGGTCTGTGGACTGAATCTGCTACAAGGAGAGCCAGGCAAGGCTaGCTCCAGGACTTGATCAAGAACTACAATAGCCCCGTCTGTGCC +
Preference number: 1 (lower is better)
Translates to: RGLWTESATRRARQG*LQDLIKNYNSPVCA
Trigger: GGCACAGACGGGGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCTCCTTGTAGCAGATTCAGTCCACAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp CTAGCCTCTGAGGCTGGTCCTTCGTTCGTTTTTCTTTTAGGTGGCTaGACTGTTCTCCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGC +
Preference number: 1 (lower is better)
Translates to: LASEAGPSFVFLLGG*TVLLWRCTGCASQS
Trigger: GCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACGAACGAAGGACCAGCCTCAGAGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp GGTCCTTCGTTCGTTTTTCTTTTAGGTGGCTGCACTGTTCTCCTATaGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: GPSFVFLLGGCTVLL*RCTGCASQSPGSQA
Trigger: TGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACGAACGAAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp TCGTTCGTTTTTCTTTTAGGTGGCTGCACTGTTCTCCTATGGAGGTaGACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACC +
Preference number: 1 (lower is better)
Translates to: SFVFLLGGCTVLLWR*TGCASQSPGSQADT
Trigger: GGTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACGAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp TTAAGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTaGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: LRVQPKRNTVSLCFP*MRCPSCFELLRGGR
Trigger: CCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp CGTTTTTCTTTTAGGTGGCTGCACTGTTCTCCTATGGAGGTGCACTaGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGAAC +
Preference number: 1 (lower is better)
Translates to: RFSFRWLHCSPMEVH*LCVSEPRFSGRYQN
Trigger: GTTCTGGTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp ATAGTCAGGGCAGCAACCAAAGGCTTGGGCAGCAAGTCCAAAGGTTaGATTCACAGCATACTTGTCACTGAGGGGCAGCAAGAGGTCTGT +
Preference number: 1 (lower is better)
Translates to: IVRAATKGLGSKSKG*IHSILVTEGQQEVC
Trigger: ACAGACCTCTTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTCAACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGCCCTGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp CCGGGCCGAGAAGTCAAGCACTGGGCAGAAACAGTGGGAACACTCTaGCACTTACTGAAAAAGACGCATGTGACATGTGACAACCATTAC +
Preference number: 1 (lower is better)
Translates to: PGREVKHWAETVGTL*HLLKKTHVTCDNHY
Trigger: GTAATGGTTGTCACATGTCACATGCGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACTGTTTCTGCCCAGTGCTTGACTTCTCGGCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp AAACCAGAGAAAGCAGGTTCTCTTCCGGGCCGAGAAGTCAAGCACTaGGCAGAAACAGTGGGAACACTCTGGCACTTACTGAAAAAGACG +
Preference number: 1 (lower is better)
Translates to: KPEKAGSLPGREVKH*AETVGTLWHLLKKT
Trigger: CGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACTGTTTCTGCCCAGTGCTTGACTTCTCGGCCCGGAAGAGAACCTGCTTTCTCTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp CTTGGGCAGCAAGTCCAAAGGTTGAATTCACAGCATACTTGTCACTaGGGGGCAGCAAGAGGTCTGTGGACTGAATCTGCTACAAGGAGA +
Preference number: 1 (lower is better)
Translates to: LGQQVQRLNSQHTCH*GAARGLWTESATRR
Trigger: TCTCCTTGTAGCAGATTCAGTCCACAGACCTCTTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTCAACCTTTGGACTTGCTGCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp AAGTGCACTGCTGCCAGCGCACACAATGAGAAAGAGTATGCCTCTTaGCAGAGAATGGAGGGTCAACCAGTTGGCATAGCTAAATCACTG +
Preference number: 1 (lower is better)
Translates to: KCTAASAHNEKEYAS*QRMEGQPVGIAKSL
Trigger: CAGTGATTTAGCTATGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCAGCAGTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp CGCTGCCTCCCTCGAAGCCCTGCGGAACTTTACAGTACTGTGTTATaGCTTGAGAATTCATTCTTAACACTGCGAGCAGTGGAAAGGGTA +
Preference number: 1 (lower is better)
Translates to: RCLPRSPAELYSTVL*LENSFLTLRAVERV
Trigger: TACCCTTTCCACTGCTCGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAAGTTCCGCAGGGCTTCGAGGGAGGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp CCTCCCTCGAAGCCCTGCGGAACTTTACAGTACTGTGTTATGGCTTaGGAATTCATTCTTAACACTGCGAGCAGTGGAAAGGGTAAAGTG +
Preference number: 1 (lower is better)
Translates to: PPSKPCGTLQYCVMA*EFILNTASSGKGKV
Trigger: CACTTTACCCTTTCCACTGCTCGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAAGTTCCGCAGGGCTTCGAGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp GCTCTAAGGAGTTACACAGCGTACTTCGTCTGCGGAGACGTGAAGTaGACTTCAGGGAGAGAATGTTTCGGTTCTGTGGTCATGTTAATC +
Preference number: 1 (lower is better)
Translates to: ALRSYTAYFVCGDVK*TSGRECFGSVVMLI
Trigger: GATTAACATGACCACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAGTACGCTGTGTAACTCCTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp ATGTTTCGGTTCTGTGGTCATGTTAATCCTCCTGACACATCCTCATaGGGCAAGGCACAATTAATTGCTGCTGCCCGATCTGAATGGAGT +
Preference number: 1 (lower is better)
Translates to: MFRFCGHVNPPDTSS*GKAQLIAAARSEWS
Trigger: ACTCCATTCAGATCGGGCAGCAGCAATTAATTGTGCCTTGCCGCATGAGGATGTGTCAGGAGGATTAACATGACCACAGAACCGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp CCTGCAGCACAAACTCACCACCAAACTGCCTACAAAATTACTCTCTaGCAGAGTTTACAGTACCGAAGCAATCTTGTAAAGCCTGTTTGT +
Preference number: 1 (lower is better)
Translates to: PAAQTHHQTAYKITL*QSLQYRSNLVKPVC
Trigger: ACAAACAGGCTTTACAAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTGGTGGTGAGTTTGTGCTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 90 bp CTACACTATGTAAAAAGGTCAGCACCACAGGTCATCCAGCTTACCTaGTGGACAACTAACAAAAATTCCAAACGGTTTCCAACTAGAGTT +
Preference number: 1 (lower is better)
Translates to: LHYVKRSAPQVIQLT*WTTNKNSKRFPTRV
Trigger: AACTCTAGTTGGAAACCGTTTGGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGACCTGTGGTGCTGACCTTTTTACATAGTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp CACTATGTAAAAAGGTCAGCACCACAGGTCATCCAGCTTACCTGCTaGACAACTAACAAAAATTCCAAACGGTTTCCAACTAGAGTTGAA +
Preference number: 1 (lower is better)
Translates to: HYVKRSAPQVIQLTC*TTNKNSKRFPTRVE
Trigger: TTCAACTCTAGTTGGAAACCGTTTGGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGACCTGTGGTGCTGACCTTTTTACATAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp AGTGGGAACACTCTGGCACTTACTGAAAAAGACGCATGTGACATGTaGCAACCATTACAAATTTGGAACAATGTGAATGACTTTTCTGAA +
Preference number: 1 (lower is better)
Translates to: SGNTLALTEKDACDM*QPLQIWNNVNDFSE
Trigger: TTCAGAAAAGTCATTCACATTGTTCCAAATTTGTAATGGTTGTCACATGTCACATGCGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 90 bp AAAGGAGGTTCCTTCCCTGAGCTTGACCTCTTATGTCCTTGGATTTaGGCATTTCTTGTCACAAACTTAATTTGTATCACAACACAAATT +
Preference number: 1 (lower is better)
Translates to: KGGSFPELDLLCPWI*AFLVTNLICITTQI
Trigger: AATTTGTGTTGTGATACAAATTAAGTTTGTGACAAGAAATGCCCAAATCCAAGGACATAAGAGGTCAAGCTCAGGGAAGGAACCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 90 bp GAGTTTACAGTACCGAAGCAATCTTGTAAAGCCTGTTTGTGTATGTaGACACAATACAGAACTGAAGACATTTCCGAAAGTACTAATAAA +
Preference number: 1 (lower is better)
Translates to: EFTVPKQSCKACLCM*TQYRTEDISESTNK
Trigger: TTTATTAGTACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTTTACAAGATTGCTTCGGTACTGTAAACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGCCTAATCTCCCTCCGTaGAAGTGCACTGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: EATQLRAGLGAASLEALRPNLPP*KCTAAS
Trigger: GCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGG...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGACGAATGGGAGCAAGTaGAACTTGCAAAATGTGGAA +
Preference number: 2 (lower is better)
Translates to: EATQLRAGLGAASLEALRTNGSK*NLQNVE
Trigger: TTCCACATTTTGCAAGTTCCACTTGCTCCCATTCGT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTTGCCCTTCATGCTTTaGGCTCCTTCGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYLPFML*APSGRE
Trigger: CTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTTATGTCCTTGGATTTaGGCATTTCTTGTCACAAAC +
Preference number: 2 (lower is better)
Translates to: EATQLRAGLGAASLEALRLCPWI*AFLVTN
Trigger: GTTTGTGACAAGAAATGCCCAAATCCAAGGACATAA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACATGCGTTGCCCTTCATaGTTTGAGCTCCTTCGGGGA +
Preference number: 2 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYMRCPS*FELLRG
Trigger: TCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCAT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGCTCCCTCCGTGGAAGTaGACTGCTGCCAGCGCACAC +
Preference number: 2 (lower is better)
Translates to: KRHILYTRFSKAAPREQRLPPWK*TAASAH
Trigger: GTGTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAG...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCTCTTGGCAGAGAATaGAGGGTCAACCAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPLGRE*RVNQLA
Trigger: TGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGAGGTGCACTGGTTGTaGGTCTCAGAGCCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCEVHWL*VSEPRF
Trigger: GAACCTGGGCTCTGAGACGCACAACCAGTGCACCTC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CAA 90 bp TTTTCTTTTAGGTGGCTGCACTGTTCTCCTATGGAGGTGCACTGGTaGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGAACGCT +
Preference number: 2 (lower is better)
Translates to: FSFRWLHCSPMEVHW*CVSEPRFSGRYQNA
Trigger: AGCGTTCTGGTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATGCTGGCCTAGGCGCTaGCTCCCTCGAAGCCCTGCG +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLCWPRR*LPRSPA
Trigger: CGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACGACACACAGATTTGGTaGCACACAGAGTATCTTAGA +
Preference number: 2 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYDTQIW*HTEYLR
Trigger: TCTAAGATACTCTGTGTGTCACCAAATCTGTGTGTC...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGTTCTCCTATGGAGGTaGACTGGTTGTGCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCVLLWR*TGCASQ
Trigger: CTGAGACGCACAACCAGTGCACCTCCATAGGAGAAC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCCTCTTGGCAGAGAATaGAGGGTCAACCAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCPLGRE*RVNQLA
Trigger: TGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTGCCAGCGCACACAATaGGAAAGAGTATGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCCQRTQ*ERVCLL
Trigger: CAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTTTCCCTGGATGCGTTaGCCTTCATGCTTTGAGCTC +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCFPWMR*PSCFEL
Trigger: GAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATACACAGCTCCGTGCTaGCCTAGGCGCTGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLYTAPC*PRRCLP
Trigger: AGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCATGCGACTGCACAGCTaGCACCCCTGGGGGCTATTA +
Preference number: 2 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLMRLHS*HPWGLL
Trigger: TAATAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCAT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCAGGAGTTGAACAAGTaGTTCAGGGAGAGAACGAAC +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCQELNK*FRERTN
Trigger: GTTCGTTCTCTCCCTGAAGCACTTGTTCAACTCCTG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTTGCCCTTCATGCTTTaGGCTCCTTCGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASLPFML*APSGRE
Trigger: CTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTAAGTTGCTGTGCACCTaGACTGGCTGTTTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCKLLCT*TGCLKR
Trigger: TCTTTTCAAACAGCCAGTTCAGGTGCACAGCAACTT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTTTCTTTTAGGTGGCTaGACTGTTCTCCTATGGAGG +
Preference number: 2 (lower is better)
Translates to: KRHILYTRFSKAAPREQRFLLGG*TVLLWR
Trigger: CCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACCTAATCTCCCTCCGTaGAAGTGCACTGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLPNLPP*KCTAAS
Trigger: GCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACCTATGGAGGTGCACTaGTTGTGCGTCTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLPMEVH*LCVSEP
Trigger: GGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATGGAGGCCCCAAGCCTaGGTGAAAAGGAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLWRPQA*VKRRFL
Trigger: AAGGAACCTCCTTTTCACTCAGGCTTGGGGCCTCCA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGACAAATTCTAAGTTCTaGAGTTTCCCTGGGAACTGC +
Preference number: 2 (lower is better)
Translates to: KRHILYTRFSKAAPREQRTNSKF*SFPGNC
Trigger: GCAGTTCCCAGGGAAACTGCAGAACTTAGAATTTGT...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTGCACTGTTCTCCTATaGAGGTGCACTGGTTGTGCG +
Preference number: 2 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLCTVLL*RCTGCA
Trigger: CGCACAACCAGTGCACCTCCATAGGAGAACAGTGCA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAATGCGTTGCCCTTCATaGTTTGAGCTCCTTCGGGGA +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLMRCPS*FELLRG
Trigger: TCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCAT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGTGAACACTGTGATTTaGTTTGCTTGCTTTTGGACA +
Preference number: 2 (lower is better)
Translates to: LRLRRREVNFRERMFRFCVNTVI*FACFWT
Trigger: TGTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCAC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAGTTCTCCTATGGAGGTaGACTGGTTGTGCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLVLLWR*TGCASQ
Trigger: CTGAGACGCACAACCAGTGCACCTCCATAGGAGAAC...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTAGCCTGTGTTTTCCCTaGATGCGTTGCCCTTCATGC +
Preference number: 2 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASSLCFP*MRCPSC
Trigger: GCATGAAGGGCAACGCATCCAGGGAAAACACAGGCT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAGCCTGTGTTTTCCCTaGATGCGTTGCCCTTCATGC +
Preference number: 2 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLSLCFP*MRCPSC
Trigger: GCATGAAGGGCAACGCATCCAGGGAAAACACAGGCT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGATCCAGCTTACCTGCTaGACAACTAACAAAAATTCC +
Preference number: 2 (lower is better)
Translates to: KRHILYTRFSKAAPREQRIQLTC*TTNKNS
Trigger: GGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGAT...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATGCCAGCGCACACAATaGGAAAGAGTATGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLCQRTQ*ERVCLL
Trigger: CAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATGCTGCTGCCCGATCTaGATGGAGTTAATCTCTCAC +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLCCCPI*MELISH
Trigger: GTGAGAGATTAACTCCATTCAGATCGGGCAGCAGCA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CAA 90 bp TTCAAGGGGCATGTGCCCTTGGAAAATAGTTTAGGTGTTGCATATTaGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAAT +
Preference number: 2 (lower is better)
Translates to: FKGHVPLENSLGVAY*SPFQWRLHRKPLQN
Trigger: ATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGCAACACCTAAACTATTTTCCAAGGGCACATGCCCCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCAAGTTGCTGTGCACCTaGACTGGCTGTTTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLKLLCT*TGCLKR
Trigger: TCTTTTCAAACAGCCAGTTCAGGTGCACAGCAACTT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAAAGAGTATGCCTCTTaGCAGAGAATGGAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLKEYAS*QRMEGQ
Trigger: TTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCCCATTTGTATCAGCTaGCGGCATCCTAATCTCCCT +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIPICIS*RHPNLP
Trigger: AGGGAGATTAGGATGCCGTCAGCTGATACAAATGGG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGTGTTTTCCCTGGATaGGTTGCCCTTCATGCTTTG +
Preference number: 2 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVCVFPG*VALHAL
Trigger: CAAAGCATGAAGGGCAACGCATCCAGGGAAAACACA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAGACCTCTTATGTCCTTaGATTTGGGCATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLDLLCP*IWAFLV
Trigger: GACAAGAAATGCCCAAATCCAAGGACATAAGAGGTC...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATTCCTTAAGTGCGAGTaGGTACTAACTCATGATAGA +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLFLKCE*VLTHDR
Trigger: TCTATCATGAGTTAGTACTCACTCGCACTTAAGGAA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTCATCCAGCTTACCTaGTGGACAACTAACAAAAAT +
Preference number: 2 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVIQLT*WTTNKN
Trigger: ATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGCATGTAGAAAAAGTTaGTGTGCACCTGAACTGGCT +
Preference number: 2 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVACRKS*CAPELA
Trigger: AGCCAGTTCAGGTGCACAGCAACTTTTTCTACATGC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGCTGTGCACCTGAACTaGCTGTTTGAAAAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVAVHLN*LFEKRK
Trigger: CTTTCTCTTTTCAAACAGCCAGTTCAGGTGCACAGC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTTTCTTTTAGGTGGCTaGACTGTTCTCCTATGGAGG +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIFLLGG*TVLLWR
Trigger: CCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAACTCAATCAATTTTCTaGCCCTTAACAGTCCCATTA +
Preference number: 2 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLTQSIF*PLTVPL
Trigger: TAATGGGACTGTTAAGGGGCAGAAAATTGATTGAGT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTATCACTGGCAGATTTTaGATTAAGAGTTCAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASITGRF*IKSSAK
Trigger: TTTGGCTGAACTCTTAATCCAAAATCTGCCAGTGAT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTAAAGAGTATGCCTCTTaGCAGAGAATGGAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIKEYAS*QRMEGQ
Trigger: TTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGTCATCCAGCTTACCTaGTGGACAACTAACAAAAAT +
Preference number: 2 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVVIQLT*WTTNKN
Trigger: ATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGAC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAATCCAGCTTACCTGCTaGACAACTAACAAAAATTCC +
Preference number: 2 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVIQLTC*TTNKNS
Trigger: GGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGAT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGACCTCTTATGTCCTTaGATTTGGGCATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIDLLCP*IWAFLV
Trigger: GACAAGAAATGCCCAAATCCAAGGACATAAGAGGTC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTTCCTTAAGTGCGAGTaGGTACTAACTCATGATAGA +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIFLKCE*VLTHDR
Trigger: TCTATCATGAGTTAGTACTCACTCGCACTTAAGGAA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTCTCTTTTCAAGCTATaGACTCAAGAGAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDISLFKL*TQERKT
Trigger: TGTTTTCCTCTCTTGAGTTCATAGCTTGAAAAGAGA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp GACAGTGCGAACGCTCAGAGAGGCTACACAGCTCCGTaGTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: DSANAQRGYTAP*WPRRCLPRSPA
Trigger: CGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTCTCTGAGCGTTCGCACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp CAGAGAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTaGCTCCCTCGAAGCCCTGCGGAACTTTACAGTACT +
Preference number: 3 (lower is better)
Translates to: QRGYTAPCWPRR*LPRSPAELYST
Trigger: AGTACTGTAAAGTTCCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACGTTGCCCTTCATGCTTaGAGCTCCTTCGGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: SADGILISLRGSALLPAHVALHA*SSFGEG
Trigger: TCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAAC...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGACTGCTCCTTTGGGGTaGGCTAATATAACACTACAC +
Preference number: 3 (lower is better)
Translates to: EATQLRAGLGAASLEALRTAPLG*ANITLH
Trigger: GTGTAGTGTTATATTAGCCAACCCCAAAGGAGCAGT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTGTGAACACTGTGATTaGCTTTGCTTGCTTTTGGAC +
Preference number: 3 (lower is better)
Translates to: EATQLRAGLGAASLEALRCEHCD*LCLLLD
Trigger: GTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCACA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAAAACCACTGCTCCTTaGGGGTTGGCTAATATAACA +
Preference number: 3 (lower is better)
Translates to: EATQLRAGLGAASLEALRKTTAP*GLANIT
Trigger: TGTTATATTAGCCAACCCCAAAGGAGCAGTGGTTTT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTGTGATTTGCTTTGCTaGCTTTTGGACACAATGATT +
Preference number: 3 (lower is better)
Translates to: EATQLRAGLGAASLEALRCDLLC*LLDTMI
Trigger: AATCATTGTGTCCAAAAGCAAGCAAAGCAAATCACA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTGGATAAGTCACTCTTaGGTAAACTCAAACCAGTTA +
Preference number: 3 (lower is better)
Translates to: EATQLRAGLGAASLEALRWISHS*VNSNQL
Trigger: TAACTGGTTTGAGTTTACCAAAGAGTGACTTATCCA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp GAGTTAATCTCTCACCAGTCACACCCCTGGGAAGCATaGCAGTGCGAACGCTCAGAGAGGCTACACAGCTCC +
Preference number: 3 (lower is better)
Translates to: ELISHQSHPWEA*QCERSERLHSS
Trigger: GGAGCTGTGTAGCCTCTCTGAGCGTTCGCACTGTCATGCTTCCCAGGGGTGTGACTGGTGAGAGATTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp CACGTGAACAGATCCTGTGTGCCAAAGAGATGCGACTaGACAGCTGCCACCCCTGGGGGCTATTACACACAA +
Preference number: 3 (lower is better)
Translates to: HVNRSCVPKRCD*TAATPGGYYTQ
Trigger: TTGTGTGTAATAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCATCTCTTTGGCACACAGGATCTGTTCACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp AGTTCACACGTGAACAGATCCTGTGTGCCAAAGAGATaGGACTGCACAGCTGCCACCCCTGGGGGCTATTAC +
Preference number: 3 (lower is better)
Translates to: SSHVNRSCVPKR*DCTAATPGGYY
Trigger: GTAATAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCATCTCTTTGGCACACAGGATCTGTTCACGTGTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp TTTAGGTGGCTGCACTGTTCTCCTATGGAGGTGCACTaGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: FRWLHCSPMEVH*LCVSEPRFSGR
Trigger: TCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp CTACAAGGAGAGCCAGGCAAGGCTGACTCCAGGACTTaGTCAAGAACTACAATAGCCCCGTCTGTGCCAGAC +
Preference number: 3 (lower is better)
Translates to: LQGEPGKADSRT*SRTTIAPSVPD
Trigger: GTCTGGCACAGACGGGGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCTCCTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp CAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATaGGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAG +
Preference number: 3 (lower is better)
Translates to: QRGILSACVFPG*VALHALSSFGE
Trigger: CTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp CAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTaGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGG +
Preference number: 3 (lower is better)
Translates to: QPKRNTVSLCFP*MRCPSCFELLR
Trigger: CCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp GCTGCCAGCGCACACAATGAGAAAGAGTATGCCTCTTaGCAGAGAATGGAGGGTCAACCAGTTGGCATAGCT +
Preference number: 3 (lower is better)
Translates to: AASAHNEKEYAS*QRMEGQPVGIA
Trigger: AGCTATGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp ATGCGGCAAGGCACAATTAATTGCTGCTGCCCGATCTaGATGGAGTTAATCTCTCACCAGTCACACCCCTGG +
Preference number: 3 (lower is better)
Translates to: MRQGTINCCCPI*MELISHQSHPW
Trigger: CCAGGGGTGTGACTGGTGAGAGATTAACTCCATTCAGATCGGGCAGCAGCAATTAATTGTGCCTTGCCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp TGGACTGAATCTGCTACAAGGAGAGCCAGGCAAGGCTaGCTCCAGGACTTGATCAAGAACTACAATAGCCCC +
Preference number: 3 (lower is better)
Translates to: WTESATRRARQG*LQDLIKNYNSP
Trigger: GGGGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCTCCTTGTAGCAGATTCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp GCAGCAACCAAAGGCTTGGGCAGCAAGTCCAAAGGTTaGATTCACAGCATACTTGTCACTGAGGGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: AATKGLGSKSKG*IHSILVTEGQQ
Trigger: TTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTCAACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp TTCGTTTTTCTTTTAGGTGGCTGCACTGTTCTCCTATaGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: FVFLLGGCTVLL*RCTGCASQSPG
Trigger: ACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp GAGTTAACACTGATGTGTAGCGCAGCAGTTCACACGTaGACAGATCCTGTGTGCCAAAGAGATGCGACTGCA +
Preference number: 3 (lower is better)
Translates to: ELTLMCSAAVHT*TDPVCQRDATA
Trigger: TGCAGTCGCATCTCTTTGGCACACAGGATCTGTTCACGTGTGAACTGCTGCGCTACACATCAGTGTTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp AGTTACACAGCGTACTTCGTCTGCGGAGACGTGAAGTaGACTTCAGGGAGAGAATGTTTCGGTTCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: SYTAYFVCGDVK*TSGRECFGSVV
Trigger: GACCACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAGTACGCTGTGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp CAAGTCCAAAGGTTGAATTCACAGCATACTTGTCACTaGGGGGCAGCAAGAGGTCTGTGGACTGAATCTGCT +
Preference number: 3 (lower is better)
Translates to: QVQRLNSQHTCH*GAARGLWTESA
Trigger: AGCAGATTCAGTCCACAGACCTCTTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTCAACCTTTGGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp TTCTGTGGTCATGTTAATCCTCCTGACACATCCTCATaGGGCAAGGCACAATTAATTGCTGCTGCCCGATCT +
Preference number: 3 (lower is better)
Translates to: FCGHVNPPDTSS*GKAQLIAAARS
Trigger: AGATCGGGCAGCAGCAATTAATTGTGCCTTGCCGCATGAGGATGTGTCAGGAGGATTAACATGACCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp GAAGTCAAGCACTGGGCAGAAACAGTGGGAACACTCTaGCACTTACTGAAAAAGACGCATGTGACATGTGAC +
Preference number: 3 (lower is better)
Translates to: EVKHWAETVGTL*HLLKKTHVTCD
Trigger: GTCACATGTCACATGCGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACTGTTTCTGCCCAGTGCTTGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp CCTCGAAGCCCTGCGGAACTTTACAGTACTGTGTTATaGCTTGAGAATTCATTCTTAACACTGCGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: PRSPAELYSTVL*LENSFLTLRAV
Trigger: CACTGCTCGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAAGTTCCGCAGGGCTTCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTAAACCACAACACTGCTaGGAGAATTTTGTAGACAGA +
Preference number: 3 (lower is better)
Translates to: LRLRRREVNFRERMFRFCKPQHC*ENFVDR
Trigger: TCTGTCTACAAAATTCTCCAAGCAGTGTTGTGGTTT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTATTAATGTGCTTTGTTaGGGTGCACTTCTTTACCAT +
Preference number: 3 (lower is better)
Translates to: LRLRRREVNFRERMFRFCINVLC*GALLYH
Trigger: ATGGTAAAGAAGTGCACCCAAACAAAGCACATTAAT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGAAAAGGTTACCCATTaGTATCAGCTGACGGCATCC +
Preference number: 3 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLEKVTH*YQLTAS
Trigger: GGATGCCGTCAGCTGATACAAATGGGTAACCTTTTC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp AAGCCCTGCGGAACTTTACAGTACTGTGTTATGGCTTaGGAATTCATTCTTAACACTGCGAGCAGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: KPCGTLQYCVMA*EFILNTASSGK
Trigger: CTTTCCACTGCTCGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAAGTTCCGCAGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp GTAAAAAGGTCAGCACCACAGGTCATCCAGCTTACCTaGTGGACAACTAACAAAAATTCCAAACGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: VKRSAPQVIQLT*WTTNKNSKRFP
Trigger: TGGAAACCGTTTGGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGACCTGTGGTGCTGACCTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp AAAAGGTCAGCACCACAGGTCATCCAGCTTACCTGCTaGACAACTAACAAAAATTCCAAACGGTTTCCAACT +
Preference number: 3 (lower is better)
Translates to: KRSAPQVIQLTC*TTNKNSKRFPT
Trigger: AGTTGGAAACCGTTTGGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGACCTGTGGTGCTGACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTATTAATGTGCTTTGTTaGGGTGCACTTCTTTACCAT +
Preference number: 3 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLINVLC*GALLYH
Trigger: ATGGTAAAGAAGTGCACCCAAACAAAGCACATTAAT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGAAAGAGTATGCCTCTaGGCAGAGAATGGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVERVCL*AENGGS
Trigger: TGACCCTCCATTCTCTGCCAAGAGGCATACTCTTTC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR GCA 72 bp CAAACTCACCACCAAACTGCCTACAAAATTACTCTCTaGCAGAGTTTACAGTACCGAAGCAATCTTGTAAAG +
Preference number: 3 (lower is better)
Translates to: QTHHQTAYKITL*QSLQYRSNLVK
Trigger: CTTTACAAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTGGTGGTGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CCA 72 bp TCCTTCCCTGAGCTTGACCTCTTATGTCCTTGGATTTaGGCATTTCTTGTCACAAACTTAATTTGTATCACA +
Preference number: 3 (lower is better)
Translates to: SFPELDLLCPWI*AFLVTNLICIT
Trigger: TGTGATACAAATTAAGTTTGTGACAAGAAATGCCCAAATCCAAGGACATAAGAGGTCAAGCTCAGGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTACTGCTCCTTTGGGGTaGGCTAATATAACACTACAC +
Preference number: 3 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDITAPLG*ANITLH
Trigger: GTGTAGTGTTATATTAGCCAACCCCAAAGGAGCAGT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp GTACCGAAGCAATCTTGTAAAGCCTGTTTGTGTATGTaGACACAATACAGAACTGAAGACATTTCCGAAAGT +
Preference number: 3 (lower is better)
Translates to: VPKQSCKACLCM*TQYRTEDISES
Trigger: ACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTTTACAAGATTGCTTCGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR TCA 72 bp ACTCTGGCACTTACTGAAAAAGACGCATGTGACATGTaGCAACCATTACAAATTTGGAACAATGTGAATGAC +
Preference number: 3 (lower is better)
Translates to: TLALTEKDACDM*QPLQIWNNVND
Trigger: GTCATTCACATTGTTCCAAATTTGTAATGGTTGTCACATGTCACATGCGTCTTTTTCAGTAAGTGCCAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTGTGAACACTGTGATTaGCTTTGCTTGCTTTTGGAC +
Preference number: 3 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDICEHCD*LCLLLD
Trigger: GTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCACA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGTGATTTGCTTTGCTaGCTTTTGGACACAATGATT +
Preference number: 3 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVCDLLC*LLDTMI
Trigger: AATCATTGTGTCCAAAAGCAAGCAAAGCAAATCACA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGTGGGCTGCCGTCCCTaGGAGCAATATGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRVGCRP*EQYGGE
Trigger: CTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCAC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGAGGTGCACTGGTTGTaGGTCTCAGAGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALREVHWL*VSEPRF
Trigger: GAACCTGGGCTCTGAGACGCACAACCAGTGCACCTC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGAGTGCCCGCGCCAGGTaGCCTCCCTCCTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGSARAR*PPSSLS
Trigger: AGACAGTGAGGAGGGAGGGCACCTGGCGCGGGCACT...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGGGTCACTGCTTGCGGTaGGCTGCCGTCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGGHCLR*AAVPES
Trigger: GCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACC...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTCAACCATCTCGGTGTaGTACCCATCGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRSTISV*YPSSPR
Trigger: CCTGGGTGACGATGGGTACCACACCGAGATGGTTGA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCCATCCGGAGGTCACTaGTTGCGGTGGGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHPSGGH*LRWAAV
Trigger: GACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGGAAACAGCTCAGCATaGACCTGGATGGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRGNSSA*TWMGWN
Trigger: ATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAGCCTGTGTTTTCCCTaGATGCGTTGCCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRSLCFP*MRCPSC
Trigger: GCATGAAGGGCAACGCATCCAGGGAAAACACAGGCT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCGGAGGTCACTGCTTaGGGTGGGCTGCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPEVTA*GGLPSL
Trigger: CAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCAGAAACGCTCCCACTaGTCCCGCGGTCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHQKRSH*SRGLSA
Trigger: GGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGCAGCAAGAGGTCTGTaGACTGAATCTGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRAARGL*TESATR
Trigger: CCTTGTAGCAGATTCAGTCCACAGACCTCTTGCTGC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGTCAGCAACGCCTGGGTaGTTTTTCCGCAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGSATPG*FFRKCW
Trigger: CCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGA...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAAGAGCCAGGACGCTaGAAGTGCCCGCGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYQEPGR*KCPRQV
Trigger: CACCTGGCGCGGGCACTTCCAGCGTCCTGGCTCTTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGCAACATCTCCAACGCTaGTTTTGGAATGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRQHLQR*FWNGCS
Trigger: AGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTG...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCTCCCTCCGTGGAAGTaGACTGCTGCCAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYLPPWK*TAASAH
Trigger: GTGTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGCATGTAGAAAAAGTTaGTGTGCACCTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRACRKS*CAPELA
Trigger: AGCCAGTTCAGGTGCACAGCAACTTTTTCTACATGC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTGCGCAAAGCTTTGCTaGGGGTCGTCTCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHCAKLC*GSSPSG
Trigger: TCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTGGACCTGGATGGGCTaGAATTACTCAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRWTWMG*NYSNFQ
Trigger: TTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGCGGGGTTGTTCATCATaGCTTCACTGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGRGCSS*LHCQSP
Trigger: AGGGCTCTGACAGTGAAGCCATGATGAACAACCCCG...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGCCCATTTGTATCAGCTaGCGGCATCCTAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGPICIS*RHPNLP
Trigger: AGGGAGATTAGGATGCCGTCAGCTGATACAAATGGG...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTGGAGGCCCCAAGCCTaGGTGAAAAGGAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHWRPQA*VKRRFL
Trigger: AAGGAACCTCCTTTTCACTCAGGCTTGGGGCCTCCA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCACCCCTGGGAAGCATaGCAGTGCGAACGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYHPWEA*QCERSE
Trigger: CTCTGAGCGTTCGCACTGTCATGCTTCCCAGGGGTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTCGTCTGCGGAGACGTaGAGTGAACTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHSSAET*SELQGE
Trigger: CTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACAGAGCCAGGCAAGGCTaGCTCCAGGACTTGATCAAG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHRARQG*LQDLIK
Trigger: CTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCT...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAGCAAGTCCAAAGGTTaGATTCACAGCATACTTGTC +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRSKSKG*IHSILV
Trigger: GACAAGTATGCTGTGAATTCAACCTTTGGACTTGCT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGTCACATAGTTTCCCCTaGAGGCGGAGTTCGTTTAGC +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGSHSFP*RRSSFS
Trigger: GCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGA...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGTGGTTTTTCCGCAAGTaGTGGTTGAGGGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGWFFRK*WLRVPW
Trigger: CCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCA...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCGGAGTTCGTTTAGCTaGCTCAGAACGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHRSSFS*LRTVLL
Trigger: CAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTTGACAAGCCACTCATaGTACTTAACGCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRLTSHS*YLTLNG
Trigger: ACCATTCAGCGTTAAGTACCATGAGTGGCTTGTCAA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGACCTCTTATGTCCTTaGATTTGGGCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRDLLCP*IWAFLV
Trigger: GACAAGAAATGCCCAAATCCAAGGACATAAGAGGTC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGATACCAGAACGCTaGCATCCCACAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYQIPER*HPTGSL
Trigger: CAGGCTGCCTGTGGGATGTCAGCGTTCTGGTATCTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGGGCTTTAACAGGAGTTaGACAAGTGCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGGFNRS*TSASGR
Trigger: TCTCCCTGAAGCACTTGTTCAACTCCTGTTAAAGCC...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCCTGCAGGTCACTGTaGAGGTGGACAGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPCRSL*RWTDKA
Trigger: GGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGGTCATCCAGCTTACCTaGTGGACAACTAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRVIQLT*WTTNKN
Trigger: ATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGAC...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACATGCGACTGCACAGCTaGCACCCCTGGGGGCTATTA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYMRLHS*HPWGLL
Trigger: TAATAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCAT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTGCTGGCCTAGGCGCTaGCTCCCTCGAAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCCWPRR*LPRSPA
Trigger: CGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTGCGCAAAGCTTTGCTaGGGGTCGTCTCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYCAKLC*GSSPSG
Trigger: TCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGACAAAGCCCGCTTCTaGCGGGCACGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCDKARF*RARPPR
Trigger: CCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCCTCTTGGCAGAGAATaGAGGGTCAACCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHPLGRE*RVNQLA
Trigger: TGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGATCCAGCTTACCTGCTaGACAACTAACAAAAATTCC +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRIQLTC*TTNKNS
Trigger: GGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGAT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCTATGGAGGTGCACTaGTTGTGCGTCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPMEVH*LCVSEP
Trigger: GGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCAAGGCAGGGCCAATTaGTTGGGAGGCTTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHQGRAN*LGGFFH
Trigger: GTGGAAAAAGCCTCCCAACCAATTGGCCCTGCCTTG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACACTCAATGCGACTCCTaGCTTCAGCAACGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYTQCDS*LQQRLG
Trigger: ACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACGGCTCAGAACGGTGCTaGTGTACTCGGGCACATCAA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYGSERC*CTRAHQ
Trigger: TTGATGTGCCCGAGTACAGCAGCACCGTTCTGAGCC...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGCTCCCGCGGTCTGAGTaGCCCTCCTCCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRLPRSE*PSSCKR
Trigger: CCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAG...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTTGGGAATAGGAGTATaGGTGCTGGAGCACAGAACC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHLGIGV*VLEHRT
Trigger: GGTTCTGTGCTCCAGCACGCATACTCCTATTCCCAA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCAGTGCCCGCGCCAGGTaGCCTCCCTCCTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCSARAR*PPSSLS
Trigger: AGACAGTGAGGAGGGAGGGCACCTGGCGCGGGCACT...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGACTCAATCAATTTTCTaGCCCTTAACAGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: EATQLRAGLGAASLEALRTQSIF*PLTVPL
Trigger: TAATGGGACTGTTAAGGGGCAGAAAATTGATTGAGT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGGCTACACAGCTCCGTaGTGGCCTAGGCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCGYTAP*WPRRCL
Trigger: GAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTCCCTGAGAGCAATATaGAGGAGAGATCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHSLRAI*RRDLHW
Trigger: CCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGGTCACTGCTTGCGGTaGGCTGCCGTCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCGHCLR*AAVPES
Trigger: GCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACGAGGGTACCTTGGAATaGAAAGCACTTCCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHEGTLE*KALPAD
Trigger: ATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTC...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTGGTTGAGGGTACCTTaGAATGGAAAGCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHWLRVP*NGKHFP
Trigger: CGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCACAGCTGCCACCCCTaGGGGCTATTACACACAAAG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYHSCHP*GLLHTK
Trigger: CTTTGTGTGTAATAGCCCCCAGGGGTGGCAGCTGTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCAAGAGCCAGGACGCTaGAAGTGCCCGCGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCQEPGR*KCPRQV
Trigger: CACCTGGCGCGGGCACTTCCAGCGTCCTGGCTCTTG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGACAGTGGGAACACTCTaGCACTTACTGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGTVGTL*HLLKKT
Trigger: CGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACTGT...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGTGGTCTCCCTCTATCTaGATCTCATATTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGWSPSI*ISYSET
Trigger: CGTTTCTGAATATGAGATTCAGATAGAGGGAGACCA...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTGCACACAAAGGGGGTaGTTCCCATATGGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYCTQRG*FPYGVA
Trigger: TGCGACTCCATATGGGAATCACCCCCTTTGTGTGCA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACGCAGCAGTTCACACGTaGACAGATCCTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYAAVHT*TDPVCQ
Trigger: TTGGCACACAGGATCTGTTCACGTGTGAACTGCTGC...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCCTGCACCAGGCCCTaGAGGTCACTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPCTRP*RSLCRW
Trigger: CCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCAGGAGTTGAACAAGTaGTTCAGGGAGAGAACGAAC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHQELNK*FRERTN
Trigger: GTTCGTTCTCTCCCTGAAGCACTTGTTCAACTCCTG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCTCCCTCGAAGCCCTaGGGAACTTTACAGTACTGT +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPPSKP*GTLQYC
Trigger: ACAGTACTGTAAAGTTCCGCAGGGCTTCGAGGGAGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTTCACCTCGGTGATCTaGCTCTCCCTCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYFTSVI*LSLTNR
Trigger: CCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCTGTCTCTCATACCATaGAATGCTCTGGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHLSLIP*NALETS
Trigger: CGAGGTTTCCAGAGCATTCCATGGTATGAGAGACAG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACGCCAGCACATGCTTTTaGGGTCTCTTTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHASTCF*GLFSSY
Trigger: ATAGCTTGAAAAGAGACCTCAAAAGCATGTGCTGGC...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTGCTGCTGCCCGATCTaGATGGAGTTAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYCCCPI*MELISH
Trigger: GTGAGAGATTAACTCCATTCAGATCGGGCAGCAGCA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCAGAAACGCTCCCACTaGTCCCGCGGTCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLQKRSH*SRGLSA
Trigger: GGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTCCTCTCCCGGGGACTaGTCTCATACCCGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCSSPGD*SHTRGC
Trigger: ACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCTCCCTCCGTGGAAGTaGACTGCTGCCAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLLPPWK*TAASAH
Trigger: GTGTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACGGTTTATCATCTGTATaGCCCCGGATGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYGLSSV*PRMWYS
Trigger: GGAGTACCACATCCGGGGCCATACAGATGATAAACC...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACACAGTGGGAACACTCTaGCACTTACTGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHTVGTL*HLLKKT
Trigger: CGTCTTTTTCAGTAAGTGCCAGAGTGTTCCCACTGT...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGGCTGGCTCAGAACGGTaGTGCTGTACTCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRAGSER*CCTRAH
Trigger: ATGTGCCCGAGTACAGCAGCACCGTTCTGAGCCAGC...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCTCCTGTAAGCGGCTaGGCAAAGCTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPPVSG*AKLCWG
Trigger: CCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACACAAATTCTAAGTTCTaGAGTTTCCCTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHTNSKF*SFPGNC
Trigger: GCAGTTCCCAGGGAAACTGCAGAACTTAGAATTTGT...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTCTCATACCATGGAATaGTCTGGAAACCTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYSHTME*SGNLAG
Trigger: TCCAGCGAGGTTTCCAGAGCATTCCATGGTATGAGA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACCAGGACGCTGGAAGTaGCCGCGCCAGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLPGRWK*PRQVPS
Trigger: GGAGGGCACCTGGCGCGGGCACTTCCAGCGTCCTGG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTCCAGGACGCTGGAAGTaGCCGCGCCAGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASPGRWK*PRQVPS
Trigger: GGAGGGCACCTGGCGCGGGCACTTCCAGCGTCCTGG...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTTGACAAGCCACTCATaGTACTTAACGCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHLTSHS*YLTLNG
Trigger: ACCATTCAGCGTTAAGTACCATGAGTGGCTTGTCAA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACAGATCTCCACTGGGTTaGCAAAGAAGCTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYRSPLG*QRSCCL
Trigger: AAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTATGGTGATGAAGTGTaGAGTTGTGAGGTTACCAGT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHYGDEV*SCEVTS
Trigger: ACTGGTAACCTCACAACTCCACACTTCATCACCATA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTCACTTTCACCTCGGTaGTCTGGCTCTCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRSLSPR*SGSPSP
Trigger: TGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCAGATACCAGAACGCTaGCATCCCACAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLQIPER*HPTGSL
Trigger: CAGGCTGCCTGTGGGATGTCAGCGTTCTGGTATCTG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGGCTCAGAACGGTGCTaGTGTACTCGGGCACATCAA +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCGSERC*CTRAHQ
Trigger: TTGATGTGCCCGAGTACAGCAGCACCGTTCTGAGCC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACACAACATCCTTCAGCTaGAAGGACATTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYTTSFS*KDILPV
Trigger: CACTGGAAGAATGTCCTTGCAGCTGAAGGATGTTGT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTGAGGTGCACTGGTTGTaGGTCTCAGAGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLEVHWL*VSEPRF
Trigger: GAACCTGGGCTCTGAGACGCACAACCAGTGCACCTC...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTGCTGGCCTAGGCGCTaGCTCCCTCGAAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLCWPRR*LPRSPA
Trigger: CGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCTTGTTTCGTGTTCCTaGAAATTTTTCCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SADGILISLRGSALLPAHLVSCS*KFFLGS
Trigger: AGACCCTAGGAAAAATTTGCAGGAACACGAAACAAG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTCAACCATCTCGGTGTaGTACCCATCGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCSTISV*YPSSPR
Trigger: CCTGGGTGACGATGGGTACCACACCGAGATGGTTGA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGTATGGCCCCGGATGTaGTACTCCAGTTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCVWPRM*YSSWSF
Trigger: GAAGGACCAACTGGAGTACCACATCCGGGGCCATAC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTCAGCAACGCCTGGGTaGTTTTTCCGCAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRSATPG*FFRKCW
Trigger: CCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCTATGGAGGTGCACTaGTTGTGCGTCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPMEVH*LCVSEP
Trigger: GGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTCCGCAAGTGCTGGTTaGGGGTACCTTGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCSASAG*GYLGME
Trigger: TTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTCCGCAAGTGCTGGTTaGGGGTACCTTGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRSASAG*GYLGME
Trigger: TTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGCAGCAGTTCACACGTaGACAGATCCTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCAAVHT*TDPVCQ
Trigger: TTGGCACACAGGATCTGTTCACGTGTGAACTGCTGC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTCCATCCGGAGGTCACTaGTTGCGGTGGGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLPSGGH*LRWAAV
Trigger: GACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGG...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACTCCCGCGGTCTGAGTaGCCCTCCTCCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLLPRSE*PSSCKR
Trigger: CCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTGTACGGGTACCAATaGCCTCTCGCACTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLLYGYQ*PLALLS
Trigger: GGAGAGGAGTGCGAGAGGGCATTGGTACCCGTACAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCATGCGTTGCCCTTCATaGTTTGAGCTCCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCMRCPS*FELLRG
Trigger: TCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCAT...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGGCTACACAGCTCCGTaGTGGCCTAGGCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASGYTAP*WPRRCL
Trigger: GAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGACTTCAGCAACGCCTaGGTGGTTTTTCCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCDFSNA*VVFPQV
Trigger: CACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCGTTTTTCTTTTAGGTaGCTGCACTGTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYRFSFR*LHCSPM
Trigger: CATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTACACAGCTCCGTGCTaGCCTAGGCGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLYTAPC*PRRCLP
Trigger: AGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGCAGGGCCAATTGGTTaGGAGGCTTTTTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCAGPIG*EAFSTD
Trigger: GTCAGTGGAAAAAGCCTCCCAACCAATTGGCCCTGC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCAAGGCAGGGCCAATTaGTTGGGAGGCTTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCQGRAN*LGGFFH
Trigger: GTGGAAAAAGCCTCCCAACCAATTGGCCCTGCCTTG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGGTCTATATGGTCTaGGCTAAGGGAAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYQVYMV*AKGKTK
Trigger: CTTTGTTTTTCCCTTAGCCCAGACCATATAGACCTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTGCACACAAAGGGGGTaGTTCCCATATGGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLCTQRG*FPYGVA
Trigger: TGCGACTCCATATGGGAATCACCCCCTTTGTGTGCA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTGCCAGCGCACACAATaGGAAAGAGTATGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRCQRTQ*ERVCLL
Trigger: CAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCCATTTGTATCAGCTaGCGGCATCCTAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCPICIS*RHPNLP
Trigger: AGGGAGATTAGGATGCCGTCAGCTGATACAAATGGG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTTAACTTCTAGCCTCTaGGGCTGGTCCTTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRLTSSL*GWSFVR
Trigger: ACGAACGAAGGACCAGCCTCAGAGGCTAGAAGTTAA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTAAGAGGTCTGTGGACTaGATCTGCTACAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCKRSVD*ICYKES
Trigger: GCTCTCCTTGTAGCAGATTCAGTCCACAGACCTCTT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTCCTCTCCCGGGGACTaGTCTCATACCCGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLSSPGD*SHTRGC
Trigger: ACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACGGAGCAAGTGGAACTTaGAAAATGTGGAATCATGAT +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYGASGT*KMWNHD
Trigger: ATCATGATTCCACATTTTGCAAGTTCCACTTGCTCC...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCTCCCTCGAAGCCCTaGGGAACTTTACAGTACTGT +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPPSKP*GTLQYC
Trigger: ACAGTACTGTAAAGTTCCGCAGGGCTTCGAGGGAGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTTTGTGGGCTCGGAATaGCTGACCCTGAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCFVGSE*LTLNVY
Trigger: GTACACATTCAGGGTCAGCCATTCCGAGCCCACAAA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTCCCTGAGAGCAATATaGAGGAGAGATCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCSLRAI*RRDLHW
Trigger: CCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGAGCTCAGCATGGACCTaGATGGGCTGGAATTACTCA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRSSAWT*MGWNYS
Trigger: TGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCT...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTAGCTCAGCATGGACCTaGATGGGCTGGAATTACTCA +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCSSAWT*MGWNYS
Trigger: TGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGACAAAGCCCGCTTCTaGCGGGCACGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVDKARF*RARPPR
Trigger: CCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGGGGTGATTCCCATATaGAGTCGCATGTGCCTATCA +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCGVIPI*SRMCLS
Trigger: TGATAGGCACATGCGACTCCATATGGGAATCACCCC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGAGGGTACCTTGGAATaGAAAGCACTTCCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCEGTLE*KALPAD
Trigger: ATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCTCTTGGCAGAGAATaGAGGGTCAACCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPLGRE*RVNQLA
Trigger: TGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACATCCAGCTTACCTGCTaGACAACTAACAAAAATTCC +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYIQLTC*TTNKNS
Trigger: GGAATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGAT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGACTGGGCAGAAACAGTaGGAACACTCTGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRTGQKQ*EHSGTY
Trigger: GTAAGTGCCAGAGTGTTCCCACTGTTTCTGCCCAGT...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGCTGTCCATTTCTACTaGCATGAAGCGTACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCAVHFY*HEAYSV
Trigger: GACAGAGTACGCTTCATGTCAGTAGAAATGGACAGC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319119.4
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTGGGCTGCCGTCCCTaGGAGCAATATGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVGCRP*EQYGGE
Trigger: CTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTACATTGGTTGGCTGTaGGGCTGCTTGGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLYIGWL*GCLGIG
Trigger: TCCTATTCCCAAGCAGCCTCACAGCCAACCAATGTA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGCATCAGACACTGTGTaGATTTCCATCCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCASDTV*ISIRES
Trigger: AGATTCCCGGATGGAAATTCACACAGTGTCTGATGC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTGCCAGCGCACACAATaGGAAAGAGTATGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLCQRTQ*ERVCLL
Trigger: CAAGAGGCATACTCTTTCTCATTGTGTGCGCTGGCA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTCTCTTTTCAAGCTATaGACTCAAGAGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYSLFKL*TQERKT
Trigger: TGTTTTCCTCTCTTGAGTTCATAGCTTGAAAAGAGA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGGGCTTTAACAGGAGTTaGACAAGTGCTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRGFNRS*TSASGR
Trigger: TCTCCCTGAAGCACTTGTTCAACTCCTGTTAAAGCC...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTCACATAGTTTCCCCTaGAGGCGGAGTTCGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLSHSFP*RRSSFS
Trigger: GCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCCGGAGGTCACTGCTTaGGGTGGGCTGCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIPEVTA*GGLPSL
Trigger: CAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCCCTGCAGGTCACTGTaGAGGTGGACAGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLPCRSL*RWTDKA
Trigger: GGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGG...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTTCCCTGGATGCGTTaGCCTTCATGCTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLFPWMR*PSCFEL
Trigger: GAGCTCAAAGCATGAAGGGCAACGCATCCAGGGAAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCAGGAGTTGAACAAGTaGTTCAGGGAGAGAACGAAC +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCQELNK*FRERTN
Trigger: GTTCGTTCTCTCCCTGAAGCACTTGTTCAACTCCTG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTTGTGGGCTCGGAATaGCTGACCCTGAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLFVGSE*LTLNVY
Trigger: GTACACATTCAGGGTCAGCCATTCCGAGCCCACAAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTAGCTGTCGGAACAGCTaGGCCGGTCGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASSCRNS*AGRTSP
Trigger: TGGAGAAGTCCGACCGGCCCAGCTGTTCCGACAGCT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAGCTGTCGGAACAGCTaGGCCGGTCGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLSCRNS*AGRTSP
Trigger: TGGAGAAGTCCGACCGGCCCAGCTGTTCCGACAGCT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCAGCATGGACCTGGATaGGCTGGAATTACTCAAACT +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCQHGPG*AGITQT
Trigger: AGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCATGTGGTACTCCAGTTaGTCCTTCCGTGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCMWYSS*SFRVYF
Trigger: GAAGTACACACGGAAGGACCAACTGGAGTACCACAT...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTTGAGTCCCTTTCAGTaGAGGCTTCACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRLSPFQ*RLHRKP
Trigger: TGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTCGGGCACATCAAACTaGATAAAACTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLSGTSN*IKLLLS
Trigger: GGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTGCGTGCACTTGTCAATaGCACACTGCATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLACTCQ*HTASEE
Trigger: TTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGC...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATTGCCCTTCATGCTTTaGGCTCCTTCGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLLPFML*APSGRE
Trigger: CTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTGGAGGCCCCAAGCCTaGGTGAAAAGGAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLWRPQA*VKRRFL
Trigger: AAGGAACCTCCTTTTCACTCAGGCTTGGGGCCTCCA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCCCTGCACCAGGCCCTaGAGGTCACTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIPCTRP*RSLCRW
Trigger: CCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAATGCGACTGCACAGCTaGCACCCCTGGGGGCTATTA +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLMRLHS*HPWGLL
Trigger: TAATAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCAT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCCTGACACATCCTCATaGGGCAAGGCACAATTAATT +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCPDTSS*GKAQLI
Trigger: AATTAATTGTGCCTTGCCGCATGAGGATGTGTCAGG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTGGACCTGGATGGGCTaGAATTACTCAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRWTWMG*NYSNFQ
Trigger: TTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCAGGTCACTGTGCAGGTaGACAGACAAAGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLRSLCR*TDKARF
Trigger: GAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTTTTTCCGCAAGTGCTaGTTGAGGGTACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRFFRKC*LRVPWN
Trigger: ATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTACCATGGAATGCTCTaGAAACCTCGCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLYHGML*KPRWRP
Trigger: GGGCCTCCAGCGAGGTTTCCAGAGCATTCCATGGTA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTGAGTCCCTTTCAGTaGAGGCTTCACAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLLSPFQ*RLHRKP
Trigger: TGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGCCTGAATGTGTACAATaGTGTCACATAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRPECVQ*CHIVSP
Trigger: AGGGGAAACTATGTGACATCATTGTACACATTCAGG...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCAACATCTCCAACGCTaGTTTTGGAATGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLQHLQR*FWNGCS
Trigger: AGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTCACTTTCACCTCGGTaGTCTGGCTCTCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASSLSPR*SGSPSP
Trigger: TGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTATTCTGCTCAACAGTaGACCGACAGTATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCYSAQQ*TDSILS
Trigger: AGAAAGGATACTGTCGGTTCACTGTTGAGCAGAATA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTATTCTGCTCAACAGTaGACCGACAGTATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCYSAQQ*TDSILS
Trigger: AGAAAGGATACTGTCGGTTCACTGTTGAGCAGAATA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGGACGCATGTGACATGTaGCAACCATTACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRDACDM*QPLQIW
Trigger: CCAAATTTGTAATGGTTGTCACATGTCACATGCGTC...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTAGAGCCAGGCAAGGCTaGCTCCAGGACTTGATCAAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASRARQG*LQDLIK
Trigger: CTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACAGCATACTTGTCACTaGGGGGCAGCAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLQHTCH*GAARGL
Trigger: CAGACCTCTTGCTGCCCCTCAGTGACAAGTATGCTG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTATGCTCTCTAGGATCTaGGTGCACTTGTCAATGACA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLMLSRI*VHLSMT
Trigger: TGTCATTGACAAGTGCACGCAGATCCTAGAGAGCAT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGGCTGCGCAAAGCTTTaGTGGGGGTCGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVGCAKL*WGSSPS
Trigger: GGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACCTCCTGTAAGCGGCTaGGCAAAGCTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVPPVSG*AKLCWG
Trigger: CCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTTGTACGGGTACCAATaGCCTCTCGCACTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASLYGYQ*PLALLS
Trigger: GGAGAGGAGTGCGAGAGGGCATTGGTACCCGTACAA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTATATGGAGTCGCATGTaGCTATCAAGGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLIWSRM*LSRLPF
Trigger: GAAAGGAAGCCTTGATAGGCACATGCGACTCCATAT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTACGCTGATTTTGGAATaGATGCTCTCTAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLTLILE*MLSRIC
Trigger: GCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAGGTCACTGTGCAGGTaGACAGACAAAGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLRSLCR*TDKARF
Trigger: GAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTATGGCCCCGGATGTaGTACTCCAGTTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVWPRM*YSSWSF
Trigger: GAAGGACCAACTGGAGTACCACATCCGGGGCCATAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTCACAGCTGCCACCCCTaGGGGCTATTACACACAAAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASHSCHP*GLLHTK
Trigger: CTTTGTGTGTAATAGCCCCCAGGGGTGGCAGCTGTG...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTACCATGGAATGCTCTaGAAACCTCGCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLYHGML*KPRWRP
Trigger: GGGCCTCCAGCGAGGTTTCCAGAGCATTCCATGGTA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGACGAATGGGAGCAAGTaGAACTTGCAAAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: KRHILYTRFSKAAPREQRTNGSK*NLQNVE
Trigger: TTCCACATTTTGCAAGTTCCACTTGCTCCCATTCGT...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTACACAGCTCCGTGCTaGCCTAGGCGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIYTAPC*PRRCLP
Trigger: AGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCAGGTCTATATGGTCTaGGCTAAGGGAAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCQVYMV*AKGKTK
Trigger: CTTTGTTTTTCCCTTAGCCCAGACCATATAGACCTG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCACCCCTGGGAAGCATaGCAGTGCGAACGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIHPWEA*QCERSE
Trigger: CTCTGAGCGTTCGCACTGTCATGCTTCCCAGGGGTG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTGCGGAGACGTGAAGTaGACTTCAGGGAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLCGDVK*TSGREC
Trigger: ACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGCTGGCAGCAAGGACTaGTTTGTGGGCTCGGAATGG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVAGSKD*FVGSEW
Trigger: CCATTCCGAGCCCACAAAGCAGTCCTTGCTGCCAGC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGGCTGCGCAAAGCTTTaGTGGGGGTCGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIGCAKL*WGSSPS
Trigger: GGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCAACTCACCACCAAACTaGCTACAAAATTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCNSPPN*LQNYSL
Trigger: CAGAGAGTAATTTTGTAGGCAGTTTGGTGGTGAGTT...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTGTTCTCCTATGGAGGTaGACTGGTTGTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLVLLWR*TGCASQ
Trigger: CTGAGACGCACAACCAGTGCACCTCCATAGGAGAAC...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTTCACCTCGGTGATCTaGCTCTCCCTCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLFTSVI*LSLTNR
Trigger: CCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGGAAACAGCTCAGCATaGACCTGGATGGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASGNSSA*TWMGWN
Trigger: ATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACGGGGTTGTTCATCATaGCTTCACTGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLRGCSS*LHCQSP
Trigger: AGGGCTCTGACAGTGAAGCCATGATGAACAACCCCG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTGGTTGAGGGTACCTTaGAATGGAAAGCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLWLRVP*NGKHFP
Trigger: CGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATGCACTGTTCTCCTATaGAGGTGCACTGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLCTVLL*RCTGCA
Trigger: CGCACAACCAGTGCACCTCCATAGGAGAACAGTGCA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTGCACTGTTCTCCTATaGAGGTGCACTGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLCTVLL*RCTGCA
Trigger: CGCACAACCAGTGCACCTCCATAGGAGAACAGTGCA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGCAGGGCCAATTGGTTaGGAGGCTTTTTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASAGPIG*EAFSTD
Trigger: GTCAGTGGAAAAAGCCTCCCAACCAATTGGCCCTGC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CAA 72 bp ACCAGTCTAGAAGCACCATTCAAGGGGCATGTGCCCTaGGAAAATAGTTTAGGTGTTGCATATTTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: TSLEAPFKGHVP*ENSLGVAYLSP
Trigger: GGGACTCAAATATGCAACACCTAAACTATTTTCCAAGGGCACATGCCCCTTGAATGGTGCTTCTAGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAACTCAATGCGACTCCTaGCTTCAGCAACGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVTQCDS*LQQRLG
Trigger: ACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTCCTTAAGTGCGAGTaGGTACTAACTCATGATAGA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLFLKCE*VLTHDR
Trigger: TCTATCATGAGTTAGTACTCACTCGCACTTAAGGAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTTAACTTCTAGCCTCTaGGGCTGGTCCTTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLLTSSL*GWSFVR
Trigger: ACGAACGAAGGACCAGCCTCAGAGGCTAGAAGTTAA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGCTGACTCCAGGACTTaGTCAAGAACTACAATAGCC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLADSRT*SRTTIA
Trigger: GGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGCTGGCAGCAAGGACTaGTTTGTGGGCTCGGAATGG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIAGSKD*FVGSEW
Trigger: CCATTCCGAGCCCACAAAGCAGTCCTTGCTGCCAGC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGGTTGGCAAAGAAGCTaGTGTCTTTCACTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLGWQRS*CLSLRF
Trigger: GAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATTGGGAATAGGAGTATaGGTGCTGGAGCACAGAACC +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLLGIGV*VLEHRT
Trigger: GGTTCTGTGCTCCAGCACGCATACTCCTATTCCCAA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTGGTTTTTCCGCAAGTaGTGGTTGAGGGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASWFFRK*WLRVPW
Trigger: CCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTGTGAACACTGTGATTTaGTTTGCTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLVNTVI*FACFWT
Trigger: TGTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCAC...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTACTCAATCAATTTTCTaGCCCTTAACAGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: LRLRRREVNFRERMFRFCTQSIF*PLTVPL
Trigger: TAATGGGACTGTTAAGGGGCAGAAAATTGATTGAGT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAGGAGAGATCTCCACTaGGTTGGCAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLRRDLH*VGKEAA
Trigger: AGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAGGAGAGATCTCCACTaGGTTGGCAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLRRDLH*VGKEAA
Trigger: AGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTGGTTTATCATCTGTATaGCCCCGGATGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLGLSSV*PRMWYS
Trigger: GGAGTACCACATCCGGGGCCATACAGATGATAAACC...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCATCACTGGCAGATTTTaGATTAAGAGTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCITGRF*IKSSAK
Trigger: TTTGGCTGAACTCTTAATCCAAAATCTGCCAGTGAT...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCCTAATCTCCCTCCGTaGAAGTGCACTGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIPNLPP*KCTAAS
Trigger: GCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTGTCTCTCATACCATaGAATGCTCTGGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLLSLIP*NALETS
Trigger: CGAGGTTTCCAGAGCATTCCATGGTATGAGAGACAG...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTACTGGGCAGAAACAGTaGGAACACTCTGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASTGQKQ*EHSGTY
Trigger: GTAAGTGCCAGAGTGTTCCCACTGTTTCTGCCCAGT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAGCAGCAAGAGGTCTGTaGACTGAATCTGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLAARGL*TESATR
Trigger: CCTTGTAGCAGATTCAGTCCACAGACCTCTTGCTGC...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CAA 72 bp TGCTTCAGGGAGAGAACGAACCCCTACTTAGGCAGTTaGACGAGGAAAAAGGCATATACTATATACCCGATT +
Preference number: 4 (lower is better)
Translates to: CFRERTNPYLGS*TRKKAYTIYPI
Trigger: AATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTGCCTAAGTAGGGGTTCGTTCTCTCCCTGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTCCATTTCTACTGACATaGAGCGTACTCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLPFLLT*SVLCPE
Trigger: CTCTGGACAGAGTACGCTTCATGTCAGTAGAAATGG...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319119.4
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTCGGGCACATCAAACTaGATAAAACTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASSGTSN*IKLLLS
Trigger: GGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGCGTGCACTTGTCAATaGCACACTGCATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASACTCQ*HTASEE
Trigger: TTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGCATCAGACACTGTGTaGATTTCCATCCGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASASDTV*ISIRES
Trigger: AGATTCCCGGATGGAAATTCACACAGTGTCTGATGC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTCGTCTGCGGAGACGTaGAGTGAACTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDISSAET*SELQGE
Trigger: CTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAGGTTGGCAAAGAAGCTaGTGTCTTTCACTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLGWQRS*CLSLRF
Trigger: GAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACC...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAACCAATAGGTCTCCTTaGTCATGGTCTCCCTCTATC +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLTNRSP*SWSPSI
Trigger: GATAGAGGGAGACCATGAGCAAGGAGACCTATTGGT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTACCAATAGGTCTCCTTaGTCATGGTCTCCCTCTATC +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASTNRSP*SWSPSI
Trigger: GATAGAGGGAGACCATGAGCAAGGAGACCTATTGGT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTTTCTTTTAGGTGGCTaGACTGTTCTCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLFLLGG*TVLLWR
Trigger: CCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCCTGACACATCCTCATaGGGCAAGGCACAATTAATT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLPDTSS*GKAQLI
Trigger: AATTAATTGTGCCTTGCCGCATGAGGATGTGTCAGG...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCGGAGTTCGTTTAGCTaGCTCAGAACGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIRSSFS*LRTVLL
Trigger: CAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTACTTAACGCTGAATaGTCCCGGAAATATGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVLNAE*SRKYGE
Trigger: CTCCCCATATTTCCGGGACCATTCAGCGTTAAGTAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAGATCTCCACTGGGTTaGCAAAGAAGCTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLRSPLG*QRSCCL
Trigger: AAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTCAGCATGGACCTGGATaGGCTGGAATTACTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASQHGPG*AGITQT
Trigger: AGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTG...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAATGTGGTACTCCAGTTaGTCCTTCCGTGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLMWYSS*SFRVYF
Trigger: GAAGTACACACGGAAGGACCAACTGGAGTACCACAT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTATCACTGGCAGATTTTaGATTAAGAGTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLITGRF*IKSSAK
Trigger: TTTGGCTGAACTCTTAATCCAAAATCTGCCAGTGAT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATACATTGGTTGGCTGTaGGGCTGCTTGGGAATAGGA +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVYIGWL*GCLGIG
Trigger: TCCTATTCCCAAGCAGCCTCACAGCCAACCAATGTA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAGGCTTCCTTTCTGGTTaGAGGACTTTCCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLGFLSG*RTFHSK
Trigger: TTTACTGTGGAAAGTCCTTCAACCAGAAAGGAAGCC...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGCTGCTGCCCGATCTaGATGGAGTTAATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVCCCPI*MELISH
Trigger: GTGAGAGATTAACTCCATTCAGATCGGGCAGCAGCA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGCGGAGACGTGAAGTaGACTTCAGGGAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVCGDVK*TSGREC
Trigger: ACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCAGCAAGTCCAAAGGTTaGATTCACAGCATACTTGTC +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLSKSKG*IHSILV
Trigger: GACAAGTATGCTGTGAATTCAACCTTTGGACTTGCT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTGGCAAGTTACTAGTTaGTACAGCATCCGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASWQVTS*YSIRLA
Trigger: AGCTAAGCGGATGCTGTATCAACTAGTAACTTGCCA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACCATTTCTACTGACATaGAGCGTACTCTGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVPFLLT*SVLCGE
Trigger: CTCTCCGCAGAGTACGCTTCATGTCAGTAGAAATGG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGCTGTCCATTTCTACTaGCATGAAGCGTACTCTGCG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVAVHFY*HEAYSA
Trigger: CGCAGAGTACGCTTCATGTCAGTAGAAATGGACAGC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAACAACATCCTTCAGCTaGAAGGACATTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLTTSFS*KDILPV
Trigger: CACTGGAAGAATGTCCTTGCAGCTGAAGGATGTTGT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGCATGTAGAAAAAGTTaGTGTGCACCTGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASACRKS*CAPELA
Trigger: AGCCAGTTCAGGTGCACAGCAACTTTTTCTACATGC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTTTCTTTTAGGTGGCTaGACTGTTCTCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASFLLGG*TVLLWR
Trigger: CCTCCATAGGAGAACAGTGCAGCCACCTAAAAGAAA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTAAGCTTCTGATACATTaGTTGGCTGTGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLKLLIH*LAVRLL
Trigger: AAGCAGCCTCACAGCCAACCAATGTATCAGAAGCTT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAAGCTTCTGATACATTaGTTGGCTGTGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLKLLIH*LAVRLL
Trigger: AAGCAGCCTCACAGCCAACCAATGTATCAGAAGCTT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTGATCTCACAGCGGAATaGTTTATCATCTGTATGGCC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLDLTAE*FIICMA
Trigger: GGCCATACAGATGATAAACCATTCCGCTGTGAGATC...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAAAGAGTATGCCTCTTaGCAGAGAATGGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLKEYAS*QRMEGQ
Trigger: TTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTGCTGTGCACCTGAACTaGCTGTTTGAAAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLAVHLN*LFEKRK
Trigger: CTTTCTCTTTTCAAACAGCCAGTTCAGGTGCACAGC...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGCTGTGCACCTGAACTaGCTGTTTGAAAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASAVHLN*LFEKRK
Trigger: CTTTCTCTTTTCAAACAGCCAGTTCAGGTGCACAGC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTGGTCTCCCTCTATCTaGATCTCATATTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASWSPSI*ISYSET
Trigger: CGTTTCTGAATATGAGATTCAGATAGAGGGAGACCA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGCTGACTCCAGGACTTaGTCAAGAACTACAATAGCC +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVADSRT*SRTTIA
Trigger: GGCTATTGTAGTTCTTGATCAAGTCCTGGAGTCAGC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTAAGAGGTCTGTGGACTaGATCTGCTACAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIKRSVD*ICYKES
Trigger: GCTCTCCTTGTAGCAGATTCAGTCCACAGACCTCTT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGTCATCCAGCTTACCTaGTGGACAACTAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLVIQLT*WTTNKN
Trigger: ATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGAC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGGGGTGATTCCCATATaGAGTCGCATGTGCCTATCA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIGVIPI*SRMCLS
Trigger: TGATAGGCACATGCGACTCCATATGGGAATCACCCC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGGCTTCCTTTCTGGTTaGAGGACTTTCCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVGFLSG*RTFHSK
Trigger: TTTACTGTGGAAAGTCCTTCAACCAGAAAGGAAGCC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTACTCATGATAGAGAGTaGTTCGATTTAGTTACCTGG +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLTHDRE*FDLVTW
Trigger: CCAGGTAACTAAATCGAATCACTCTCTATCATGAGT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTACTCATGATAGAGAGTaGTTCGATTTAGTTACCTGG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASTHDRE*FDLVTW
Trigger: CCAGGTAACTAAATCGAATCACTCTCTATCATGAGT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTTCCTTAAGTGCGAGTaGGTACTAACTCATGATAGA +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLFLKCE*VLTHDR
Trigger: TCTATCATGAGTTAGTACTCACTCGCACTTAAGGAA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAAAGTTGCTGTGCACCTaGACTGGCTGTTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVKLLCT*TGCLKR
Trigger: TCTTTTCAAACAGCCAGTTCAGGTGCACAGCAACTT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTCTCTTTTCAAGCTATaGACTCAAGAGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLSLFKL*TQERKT
Trigger: TGTTTTCCTCTCTTGAGTTCATAGCTTGAAAAGAGA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGGCAAGTTACTAGTTaGTACAGCATCCGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVWQVTS*YSIRLA
Trigger: AGCTAAGCGGATGCTGTATCAACTAGTAACTTGCCA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAATATGGAGTCGCATGTaGCTATCAAGGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVIWSRM*LSRLPF
Trigger: GAAAGGAAGCCTTGATAGGCACATGCGACTCCATAT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTGAACACTGTGATTTaGTTTGCTTGCTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVNTVI*FACFWT
Trigger: TGTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAACTCACCACCAAACTaGCTACAAAATTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLNSPPN*LQNYSL
Trigger: CAGAGAGTAATTTTGTAGGCAGTTTGGTGGTGAGTT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTCTCATACCATGGAATaGTCTGGAAACCTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDISHTME*SGNLAG
Trigger: TCCAGCGAGGTTTCCAGAGCATTCCATGGTATGAGA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTGGAGCAAGTGGAACTTaGAAAATGTGGAATCATGAT +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLGASGT*KMWNHD
Trigger: ATCATGATTCCACATTTTGCAAGTTCCACTTGCTCC...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTTTCTACAGTATATTCTaGTCAACAGTGAACCGACAG +
Preference number: 4 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASFYSIF*STVNRQ
Trigger: CTGTCGGTTCACTGTTGAGCAGAATATACTGTAGAA...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTAAGTTGCTGTGCACCTaGACTGGCTGTTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIKLLCT*TGCLKR
Trigger: TCTTTTCAAACAGCCAGTTCAGGTGCACAGCAACTT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGCCAGCACATGCTTTTaGGGTCTCTTTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIASTCF*GLFSSY
Trigger: ATAGCTTGAAAAGAGACCTCAAAAGCATGTGCTGGC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGACGCATGTGACATGTaGCAACCATTACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVDACDM*QPLQIW
Trigger: CCAAATTTGTAATGGTTGTCACATGTCACATGCGTC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTACGCTGATTTTGGAATaGATGCTCTCTAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDITLILE*MLSRIC
Trigger: GCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACGTTTTTCTTTTAGGTaGCTGCACTGTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVRFSFR*LHCSPM
Trigger: CATAGGAGAACAGTGCAGCCACCTAAAAGAAAAACG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTTATGTCCTTGGATTTaGGCATTTCTTGTCACAAAC +
Preference number: 4 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLLCPWI*AFLVTN
Trigger: GTTTGTGACAAGAAATGCCCAAATCCAAGGACATAA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGACCTCTTATGTCCTTaGATTTGGGCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVDLLCP*IWAFLV
Trigger: GACAAGAAATGCCCAAATCCAAGGACATAAGAGGTC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAATACGCAGGTCTATATaGTCTGGGCTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVIRRSI*SGLREK
Trigger: TTTTTCCCTTAGCCCAGACCATATAGACCTGCGTAT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGACACACAGATTTGGTaGCACACAGAGTATCTTAGA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIDTQIW*HTEYLR
Trigger: TCTAAGATACTCTGTGTGTCACCAAATCTGTGTGTC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTACGAATGGGAGCAAGTaGAACTTGCAAAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDITNGSK*NLQNVE
Trigger: TTCCACATTTTGCAAGTTCCACTTGCTCCCATTCGT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTATACGCAGGTCTATATaGTCTGGGCTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIIRRSI*SGLREK
Trigger: TTTTTCCCTTAGCCCAGACCATATAGACCTGCGTAT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
3UTR CAA 72 bp ATATCTCTAGAAAAGGACGCTGTCACTGTCTTCACATaGTCTAATATTGAAAAGGTAGCTCAAGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: ISLEKDAVTVFT*SNIEKVAQEET
Trigger: AGTCTCTTCTTGAGCTACCTTTTCAATATTAGACAATGTGAAGACAGTGACAGCGTCCTTTTCTAGAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACCACAAACATTTACCTaGAACCCCAGAACATATTTA +
Preference number: 4 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVPQTFT*NPRTYL
Trigger: TAAATATGTTCTGGGGTTTCAGGTAAATGTTTGTGG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTTTCTACAGTATATTCTaGTCAACAGTGAACCGACAG +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIFYSIF*STVNRQ
Trigger: CTGTCGGTTCACTGTTGAGCAGAATATACTGTAGAA...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR GCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCTTGTTTCGTGTTCCTaGAAATTTTTCCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDILVSCS*KFFLGS
Trigger: AGACCCTAGGAAAAATTTGCAGGAACACGAAACAAG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR TCA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCCACAAACATTTACCTaGAACCCCAGAACATATTTA +
Preference number: 4 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIPQTFT*NPRTYL
Trigger: TAAATATGTTCTGGGGTTTCAGGTAAATGTTTGTGG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp CGCGGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTTaGTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: RGLSAPPPVSGCAKL*WGSSPSGGHCLRWA
Trigger: AGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp TCCCACTGCTCCCGCGGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTaGGCAAAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: SHCSRGLSAPPPVSG*AKLCWGSSPSGGHC
Trigger: GCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAGCAGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp GGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTTGCTaGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGGTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLSAPPPVSGCAKLC*GSSPSGGHCLRWAA
Trigger: GGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp TCACTGTCAGAGCCCTGCACCAGGCCCTGCAGGTCACTGTGCAGGTaGACAGACAAAGCCCGCTTCTGGCGGGCACGCCCTCCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SLSEPCTRPCRSLCR*TDKARFWRARPPRK
Trigger: TTTCCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp AGGCCCTGCAGGTCACTGTGCAGGTGGACAGACAAAGCCCGCTTCTaGCGGGCACGCCCTCCTCGGAAACAGCTCAGCATGGACCTGGAT +
Preference number: 5 (lower is better)
Translates to: RPCRSLCRWTDKARF*RARPPRKQLSMDLD
Trigger: ATCCAGGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGTTCCGCAAGTGCTGGTaGAGGGTACCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: EATQLRAGLGAASLEALRFRKCW*RVPWNG
Trigger: TCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAA...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp GGCTGCGCAAAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTaGTTGCGGTGGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GCAKLCWGSSPSGGH*LRWAAVPESNMEER
Trigger: TCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGCAGATCAACCTCTCATaGTACGGGTACCAATGCCCT +
Preference number: 5 (lower is better)
Translates to: EATQLRAGLGAASLEALRQINLS*YGYQCP
Trigger: AGGGCATTGGTACCCGTACAATGAGAGGTTGATCTG...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp GCGCAAAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTaGGGTGGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGATCTC +
Preference number: 5 (lower is better)
Translates to: AQSFAGGRLHPEVTA*GGLPSLRAIWRRDL
Trigger: GAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp GGGTTGTTCATCATGGCTTCACTGTCAGAGCCCTGCACCAGGCCCTaGAGGTCACTGTGCAGGTGGACAGACAAAGCCCGCTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GLFIMASLSEPCTRP*RSLCRWTDKARFWR
Trigger: CCGCCAGAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGAAGCCATGATGAACAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp AAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGGTaGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGATCTCCACTG +
Preference number: 5 (lower is better)
Translates to: KLCWGSSPSGGHCLR*AAVPESNMEERSPL
Trigger: CAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GAGGCTACACAGCTCCGTGCTGGCCTAGGCGCTGCCTCCCTCGAAGCCCTGCGGAAGGGGCATGTGCCCTaGGAAAATAGTTTAGGTGTT +
Preference number: 5 (lower is better)
Translates to: EATQLRAGLGAASLEALRKGHVP*ENSLGV
Trigger: AACACCTAAACTATTTTCCAAGGGCACATGCCCCTT...CCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTGTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp GTCGTCTCCATCCGGAGGTCACTGCTTGCGGTGGGCTGCCGTCCCTaGGAGCAATATGGAGGAGAGATCTCCACTGGGTTGGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: VVSIRRSLLAVGCRP*EQYGGEISTGLAKK
Trigger: CTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp CTCTCATACCCGGGGTTGTTCATCATGGCTTCACTGTCAGAGCCCTaGACCAGGCCCTGCAGGTCACTGTGCAGGTGGACAGACAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSYPGLFIMASLSEP*TRPCRSLCRWTDKA
Trigger: GGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGAAGCCATGATGAACAACCCCGGGTATGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CCCACATTCACTGCCACAACTTGTTCCCCATCAACCATCTCGGTGTaGTACCCATCGTCACCCAGGGAGGAGCTGTCGGAACAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PTFTATTCSPSTISV*YPSSPREELSEQLG
Trigger: GCCCAGCTGTTCCGACAGCTCCTCCCTGGGTGACGATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGGATGTGGTACTCCAGTaGGTCCTTCCGTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGDVVLQ*VLPCVL
Trigger: AAGTACACACGGAAGGACCAACTGGAGTACCACATC...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp CATGGTCTCCCTCTATCTGAATCTCATATTCAGAAACGCTCCCACTaGTCCCGCGGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTGCGCA +
Preference number: 5 (lower is better)
Translates to: HGLPLSESHIQKRSH*SRGLSAPPPVSGCA
Trigger: TGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTGAATATGAGATTCAGATAGAGGGAGACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp CATTGTACGGGTACCAATGCCCTCTCGCACTCCTCTCCCGGGGACTaGTCTCATACCCGGGGTTGTTCATCATGGCTTCACTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: HCTGTNALSHSSPGD*SHTRGCSSWLHCQS
Trigger: GCTCTGACAGTGAAGCCATGATGAACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGAGTGCGAGAGGGCATTGGTACCCGTACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CCGGAGGTCACTGCTTGCGGTGGGCTGCCGTCCCTGAGAGCAATATaGAGGAGAGATCTCCACTGGGTTGGCAAAGAAGCTGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: PEVTACGGLPSLRAI*RRDLHWVGKEAAVF
Trigger: AAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACCTTCTGATACATTGGTaGGCTGTGAGGCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: SADGILISLRGSALLPAHLLIHW*AVRLLG
Trigger: CCCAAGCAGCCTCACAGCCAACCAATGTATCAGAAG...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGAAAGCTTCTGATACATaGGTTGGCTGTGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGKASDT*VGCEAA
Trigger: AGCAGCCTCACAGCCAACCAATGTATCAGAAGCTTT...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGGAAAAGGTTACCCATTaGTATCAGCTGACGGCATCC +
Preference number: 5 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGEKVTH*YQLTAS
Trigger: GGATGCCGTCAGCTGATACAAATGGGTAACCTTTTC...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CTGGGCCGGTCGGACTTCTCCATCTTCACTTTCACCTCGGTGATCTaGCTCTCCCTCACCAATAGGTCTCCTTGCTCATGGTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LGRSDFSIFTFTSVI*LSLTNRSPCSWSPS
Trigger: AGAGGGAGACCATGAGCAAGGAGACCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp AAGCCCGCTTCTGGCGGGCACGCCCTCCTCGGAAACAGCTCAGCATaGACCTGGATGGGCTGGAATTACTCAAACTTCCAAAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KPASGGHALLGNSSA*TWMGWNYSNFQKLL
Trigger: CAGAAGCTTTTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCCAAGGCAGGGCCAATaGGTTGGGAGGCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYPRQGQ*VGRLFP
Trigger: TGGAAAAAGCCTCCCAACCAATTGGCCCTGCCTTGG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp AACAGCTGGGCCGGTCGGACTTCTCCATCTTCACTTTCACCTCGGTaGTCTGGCTCTCCCTCACCAATAGGTCTCCTTGCTCATGGTCTC +
Preference number: 5 (lower is better)
Translates to: NSWAGRTSPSSLSPR*SGSPSPIGLLAHGL
Trigger: GAGACCATGAGCAAGGAGACCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp GGTGGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGATCTCCACTaGGTTGGCAAAGAAGCTGCTGTCTTTCACTCCGTTTCGACTCTC +
Preference number: 5 (lower is better)
Translates to: GGLPSLRAIWRRDLH*VGKEAAVFHSVSTL
Trigger: GAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp TGTTCTCTCGGGGGACTCAATGCGACTCCTGACTTCAGCAACGCCTaGGTGGTTTTTCCGCAAGTGCTGGTTGAGGGTACCTTGGAATGG +
Preference number: 5 (lower is better)
Translates to: CSLGGLNATPDFSNA*VVFPQVLVEGTLEW
Trigger: CCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGTCCCCCGAGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCTGGTTGAGGGTACCTaGGAATGGAAAGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYLVEGT*EWKALP
Trigger: GGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGGGTCCAGCCTCCCCTaGAGGCACGCGGCTTTAACA +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCGSSLP*RHAALT
Trigger: TGTTAAAGCCGCGTGCCTCAAGGGGAGGCTGGACCC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp GGAGTATGCGTGCTGGAGCACAGAACCATAGGAGCCCACATTCACTaGCACAACTTGTTCCCCATCAACCATCTCGGTGTGGTACCCATC +
Preference number: 5 (lower is better)
Translates to: GVCVLEHRTIGAHIH*HNLFPINHLGVVPI
Trigger: GATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAATGTGGGCTCCTATGGTTCTGTGCTCCAGCACGCATACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp ATGCGACTCCTGACTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGTaGTGGTTGAGGGTACCTTGGAATGGAAAGCACTTCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: MRLLTSATPGWFFRK*WLRVPWNGKHFPQI
Trigger: GATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp GCTGCCGTCCCTGAGAGCAATATGGAGGAGAGATCTCCACTGGGTTaGCAAAGAAGCTGCTGTCTTTCACTCCGTTTCGACTCTCGGGAT +
Preference number: 5 (lower is better)
Translates to: AAVPESNMEERSPLG*QRSCCLSLRFDSRD
Trigger: ATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CGACTCCTGACTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGTGCTaGTTGAGGGTACCTTGGAATGGAAAGCACTTCCCGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: RLLTSATPGWFFRKC*LRVPWNGKHFPQIS
Trigger: TGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCCTGGATGCGTTGCCCTTCATGCTTTGAGCTCCTTCGGGGAGGGAGGGCAGGGACAGAAATAGGGACTTaGCTTTCCAAAAAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: PWMRCPSCFELLRGGRAGTEIGT*LSKKSC
Trigger: GCAACTCTTTTTGGAAAGCAAAGTCCCTATTTCTGT...CCCTGCCCTCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAACGCATCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp GGACTGCTTTGTGGGCTCGGAATGGCTGACCCTGAATGTGTACAATaGTGTCACATAGTTTCCCCTGCAGGCGGAGTTCGTTTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GLLCGLGMADPECVQ*CHIVSPAGGVRLAG
Trigger: GCCAGCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGACATCATTGTACACATTCAGGGTCAGCCATTCCGAGCCCACAAAGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp CTCTCCCTCACCAATAGGTCTCCTTGCTCATGGTCTCCCTCTATCTaGATCTCATATTCAGAAACGCTCCCACTGCTCCCGCGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LSLTNRSPCSWSPSI*ISYSETLPLLPRSE
Trigger: CTCAGACCGCGGGAGCAGTGGGAGCGTTTCTGAATATGAGATTCAGATAGAGGGAGACCATGAGCAAGGAGACCTATTGGTGAGGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACATTCACTGCCACAACTaGTTCCCCATCAACCATCTC +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYIHCHN*FPINHL
Trigger: GAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAAT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGTTGCCCTTCATGCTTaGAGCTCCTTCGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCVALHA*SSFGEG
Trigger: TCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAAC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTGTGAACACTGTGATTaGCTTTGCTTGCTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SADGILISLRGSALLPAHCEHCD*LCLLLD
Trigger: GTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCACA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp AAGCACTTCCCGCAGATCTCACAGCGGAATGGTTTATCATCTGTATaGCCCCGGATGTGGTACTCCAGTTGGTCCTTCCGTGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: KHFPQISQRNGLSSV*PRMWYSSWSFRVYF
Trigger: GAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTGCGGGAAGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp GGTACCTTGGAATGGAAAGCACTTCCCGCAGATCTCACAGCGGAATaGTTTATCATCTGTATGGCCCCGGATGTGGTACTCCAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GTLEWKALPADLTAE*FIICMAPDVVLQLV
Trigger: GACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCAAGGCAGGGCCAATaGGTTGGGAGGCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCPRQGQ*VGRLFP
Trigger: TGGAAAAAGCCTCCCAACCAATTGGCCCTGCCTTGG...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 90 bp GAGAGCAATATGGAGGAGAGATCTCCACTGGGTTGGCAAAGAAGCTaGTGTCTTTCACTCCGTTTCGACTCTCGGGATTCTCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ESNMEERSPLGWQRS*CLSLRFDSRDSLQH
Trigger: GTGCTGAAGAGAATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CAGATCTCACAGCGGAATGGTTTATCATCTGTATGGCCCCGGATGTaGTACTCCAGTTGGTCCTTCCGTGTGTACTTCTTCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: QISQRNGLSSVWPRM*YSSWSFRVYFFPQN
Trigger: GTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCTCTCATACCCGGGGTaGTTCATCATGGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCLSYPG*FIMASL
Trigger: CAGTGAAGCCATGATGAACAACCCCGGGTATGAGAG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGCTCTCATACCCGGGGTaGTTCATCATGGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: KRHILYTRFSKAAPREQRLSYPG*FIMASL
Trigger: CAGTGAAGCCATGATGAACAACCCCGGGTATGAGAG...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp TCAGCTGACGGCATCCTAATCTCCCTCCGTGGAAGTGCACTGCTGCCAGCGCACTGGATAAGTCACTCTTaGGTAAACTCAAACCAGTTA +
Preference number: 5 (lower is better)
Translates to: SADGILISLRGSALLPAHWISHS*VNSNQL
Trigger: TAACTGGTTTGAGTTTACCAAAGAGTGACTTATCCA...GTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGATGCCGTCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCAGCAAGTCCAAAGGTaGAATTCACAGCATACTTGT +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYQQVQR*NSQHTC
Trigger: ACAAGTATGCTGTGAATTCAACCTTTGGACTTGCTG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp GCACCGACGGTAACAGAGTCAACATCTCCAACGCTGATTTTGGAATaGATGCTCTCTAGGATCTGCGTGCACTTGTCAATGACACACTGC +
Preference number: 5 (lower is better)
Translates to: APTVTESTSPTLILE*MLSRICVHLSMTHC
Trigger: GCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCTGTTACCGTCGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 90 bp CGGAATGGTTTATCATCTGTATGGCCCCGGATGTGGTACTCCAGTTaGTCCTTCCGTGTGTACTTCTTCCCACAGAACTTGCACACAAAG +
Preference number: 5 (lower is better)
Translates to: RNGLSSVWPRMWYSS*SFRVYFFPQNLHTK
Trigger: CTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTAGGATCTGCGTGCACTaGTCAATGACACACTGCATC +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCRICVH*SMTHCI
Trigger: GATGCAGTGTGTCATTGACAAGTGCACGCAGATCCT...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATCCGGAGGTCACTGCTaGCGGTGGGCTGCCGTCCCT +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVSGGHC*RWAAVP
Trigger: AGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTCGGCTGCGCAAAGCTTaGCTGGGGGTCGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLRLRKA*LGVVSI
Trigger: GATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCG...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCTTCTGATACATTGGTaGGCTGTGAGGCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLLLIHW*AVRLLG
Trigger: CCCAAGCAGCCTCACAGCCAACCAATGTATCAGAAG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGATGTGGTACTCCAGTaGGTCCTTCCGTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCDVVLQ*VLPCVL
Trigger: AAGTACACACGGAAGGACCAACTGGAGTACCACATC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTTTCCGCAAGTGCTGGTaGAGGGTACCTTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLFRKCW*RVPWNG
Trigger: TCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAA...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTGAAAGAGTATGCCTCTaGGCAGAGAATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCERVCL*AENGGS
Trigger: TGACCCTCCATTCTCTGCCAAGAGGCATACTCTTTC...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACCTTATGTCCTTGGATTaGGGCATTTCTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYLMSLD*GISCHK
Trigger: TTTGTGACAAGAAATGCCCAAATCCAAGGACATAAG...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACACAGAAATAGGGACTTaGCTTTCCAAAAAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYTEIGT*LSKKSC
Trigger: GCAACTCTTTTTGGAAAGCAAAGTCCCTATTTCTGT...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCTCTCCAACGCTGATTTaGGAATGGATGCTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCSPTLI*EWMLSR
Trigger: CCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGA...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CCTATGGAGGTGCACTGGTTGTGCGTCTCAGAGCCCAGGTTCTCAGGCAGATACTGTGATTTGCTTTGCTaGCTTTTGGACACAATGATT +
Preference number: 5 (lower is better)
Translates to: PMEVHWLCVSEPRFSGRYCDLLC*LLDTMI
Trigger: AATCATTGTGTCCAAAAGCAAGCAAAGCAAATCACA...GTATCTGCCTGAGAACCTGGGCTCTGAGACGCACAACCAGTGCACCTCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp ATGCTCTCTAGGATCTGCGTGCACTTGTCAATGACACACTGCATCTaGAGAAAGCTGGCTGCAGTCAGAAAACTGACAACATCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: MLSRICVHLSMTHCI*RKLAAVRKLTTSFS
Trigger: GCTGAAGGATGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGTTGCCCTTCATGCTTaGAGCTCCTTCGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASVALHA*SSFGEG
Trigger: TCCCTCCCCGAAGGAGCTCAAAGCATGAAGGGCAAC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGCAGCAACCAAAGGCTaGGGCAGCAAGTCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLAATKG*GSKSKG
Trigger: ACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTCGGCTGCGCAAAGCTTaGCTGGGGGTCGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIRLRKA*LGVVSI
Trigger: GATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCG...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTGTGAACACTGTGATTaGCTTTGCTTGCTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCCEHCD*LCLLLD
Trigger: GTCCAAAAGCAAGCAAAGCAAATCACAGTGTTCACA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTCCCTACTTAGGCAGTTaGACGAGGAAAAAGGCATAT +
Preference number: 5 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLPYLGS*TRKKAY
Trigger: ATATGCCTTTTTCCTCGTCAAACTGCCTAAGTAGGG...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGGGTCCAGCCTCCCCTaGAGGCACGCGGCTTTAACA +
Preference number: 5 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIGSSLP*RHAALT
Trigger: TGTTAAAGCCGCGTGCCTCAAGGGGAGGCTGGACCC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTCAGCAAGTCCAAAGGTaGAATTCACAGCATACTTGT +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCQQVQR*NSQHTC
Trigger: ACAAGTATGCTGTGAATTCAACCTTTGGACTTGCTG...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp CTCGGGCACATCAAACTGAATAAAACTGCTGCTGTCCATTTCTACTaGCATGAAGCGTACTCTGCGGAGAGAGAGAGTTTGCATCATTCA +
Preference number: 5 (lower is better)
Translates to: LGHIKLNKTAAVHFY*HEAYSAERESLHHS
Trigger: TGAATGATGCAAACTCTCTCTCTCCGCAGAGTACGCTTCATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCCCTTCATGCTTAAAACCACTGCTCCTTaGGGGTTGGCTAATATAACA +
Preference number: 5 (lower is better)
Translates to: KEEYCQPVFSLDALPFMLKTTAP*GLANIT
Trigger: TGTTATATTAGCCAACCCCAAAGGAGCAGTGGTTTT...AAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCGAATTCACAGCATACTaGTCACTGAGGGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLEFTAY*SLRGSK
Trigger: CTTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTC...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 90 bp TTCCCATATGGAGTCGCATGTGCCTATCAAGGCTTCCTTTCTGGTTaGAGGACTTTCCACAGTAAATACAGATCAACCTCTCATTGTACG +
Preference number: 5 (lower is better)
Translates to: FPYGVACAYQGFLSG*RTFHSKYRSTSHCT
Trigger: CGTACAATGAGAGGTTGATCTGTATTTACTGTGGAAAGTCCTTCAACCAGAAAGGAAGCCTTGATAGGCACATGCGACTCCATATGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAGGATCTGCGTGCACTaGTCAATGACACACTGCATC +
Preference number: 5 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLRICVH*SMTHCI
Trigger: GATGCAGTGTGTCATTGACAAGTGCACGCAGATCCT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTCTCCAACGCTGATTTaGGAATGGATGCTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLSPTLI*EWMLSR
Trigger: CCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCAAAGCTTCTGATACATaGGTTGGCTGTGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLKASDT*VGCEAA
Trigger: AGCAGCCTCACAGCCAACCAATGTATCAGAAGCTTT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTGAAAGAGTATGCCTCTaGGCAGAGAATGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASERVCL*AENGGS
Trigger: TGACCCTCCATTCTCTGCCAAGAGGCATACTCTTTC...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGTGTGATTTGCTTTGCTaGCTTTTGGACACAATGATT +
Preference number: 5 (lower is better)
Translates to: KRHILYTRFSKAAPREQRCDLLC*LLDTMI
Trigger: AATCATTGTGTCCAAAAGCAAGCAAAGCAAATCACA...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTTCGTCTGCGGAGACGTGAAGTGAACTTCAGGGAGAGAATGTTTCGGTTCTGTTGGATAAGTCACTCTTaGGTAAACTCAAACCAGTTA +
Preference number: 5 (lower is better)
Translates to: LRLRRREVNFRERMFRFCWISHS*VNSNQL
Trigger: TAACTGGTTTGAGTTTACCAAAGAGTGACTTATCCA...ACAGAACCGAAACATTCTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AGAGTTCAGCCAAAGAGGAATACTGTCAGCCTGTGTTTTCCCTGGATGCGTTGCGGTTACCAGTTTATATaGCAAGATAATGACACTGTG +
Preference number: 5 (lower is better)
Translates to: RVQPKRNTVSLCFPWMRCGYQFI*QDNDTV
Trigger: CACAGTGTCATTATCTTGCAATATAAACTGGTAACC...GCAACGCATCCAGGGAAAACACAGGCTGACAGTATTCCTCTTTGGCTGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCTCGGGAGCAGCGGGGTTACCAGTTTATATaGCAAGATAATGACACTGTG +
Preference number: 5 (lower is better)
Translates to: KRHILYTRFSKAAPREQRGYQFI*QDNDTV
Trigger: CACAGTGTCATTATCTTGCAATATAAACTGGTAACC...CCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTATTCACTGCCACAACTaGTTCCCCATCAACCATCTC +
Preference number: 5 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLIHCHN*FPINHL
Trigger: GAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAAT...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTTTCTTCCCACAGAACTaGCACACAAAGGGGGTGATT +
Preference number: 5 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLFFPQN*HTKGVI
Trigger: AATCACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAA...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTATTCTTCCCACAGAACTaGCACACAAAGGGGGTGATT +
Preference number: 5 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLFFPQN*HTKGVI
Trigger: AATCACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAA...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACTGGTTGAGGGTACCTaGGAATGGAAAGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVLVEGT*EWKALP
Trigger: GGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCTGCCAGCACATGCTTTaGAGGTCTCTTTTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLCQHML*RSLFKL
Trigger: TAGCTTGAAAAGAGACCTCAAAAGCATGTGCTGGCA...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCCATACAGTAACGTGTTaGCCAGCACATGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLHTVTC*PAHAFE
Trigger: CTCAAAAGCATGTGCTGGCAAACACGTTACTGTATG...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGCAGCAACCAAAGGCTaGGGCAGCAAGTCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIAATKG*GSKSKG
Trigger: ACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTACAGATCAACCTCTCATaGTACGGGTACCAATGCCCT +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVQINLS*YGYQCP
Trigger: AGGGCATTGGTACCCGTACAATGAGAGGTTGATCTG...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTACTGCTCCTTTGGGGTaGGCTAATATAACACTACAC +
Preference number: 5 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASTAPLG*ANITLH
Trigger: GTGTAGTGTTATATTAGCCAACCCCAAAGGAGCAGT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACATACAGTAACGTGTTaGCCAGCACATGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLHTVTC*PAHAFE
Trigger: CTCAAAAGCATGTGCTGGCAAACACGTTACTGTATG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAAACTGCCTACAAAATTACTCTCTGCCAGAGTTTACAGTACCGAAGCAATCTTCCCTACTTAGGCAGTTaGACGAGGAAAAAGGCATAT +
Preference number: 5 (lower is better)
Translates to: QTAYKITLCQSLQYRSNLPYLGS*TRKKAY
Trigger: ATATGCCTTTTTCCTCGTCAAACTGCCTAAGTAGGG...AAGATTGCTTCGGTACTGTAAACTCTGGCAGAGAGTAATTTTGTAGGCAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAGAAAAGGTTACCCATTaGTATCAGCTGACGGCATCC +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVEKVTH*YQLTAS
Trigger: GGATGCCGTCAGCTGATACAAATGGGTAACCTTTTC...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTGAATTCACAGCATACTaGTCACTGAGGGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIEFTAY*SLRGSK
Trigger: CTTGCTGCCCCTCAGTGACAAGTATGCTGTGAATTC...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CAGTTTGACGAGGAAAAAGGCATATACTATATACCCGATTTAGCAAAGCCGCTCATTAATGTGCTTTGTTaGGGTGCACTTCTTTACCAT +
Preference number: 5 (lower is better)
Translates to: QFDEEKGIYYIPDLAKPLINVLC*GALLYH
Trigger: ATGGTAAAGAAGTGCACCCAAACAAAGCACATTAAT...GAGCGGCTTTGCTAAATCGGGTATATAGTATATGCCTTTTTCCTCGTCAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTAAAACCACAACACTGCTaGGAGAATTTTGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLKPQHC*ENFVDR
Trigger: TCTGTCTACAAAATTCTCCAAGCAGTGTTGTGGTTT...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTATGCCAGCACATGCTTTaGAGGTCTCTTTTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVCQHML*RSLFKL
Trigger: TAGCTTGAAAAGAGACCTCAAAAGCATGTGCTGGCA...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp GCATATTTGAGTCCCTTTCAGTGGAGGCTTCACAGGAAACCATTACAGAATTTACTTATGTCCTTGGATTaGGGCATTTCTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: AYLSPFQWRLHRKPLQNLLMSLD*GISCHK
Trigger: TTTGTGACAAGAAATGCCCAAATCCAAGGACATAAG...TAAATTCTGTAATGGTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp AAGCCTGTTTGTGTATGTGAACACAATACAGAACTGAAGACATTTCCGAAAGTAAAGGGGCATGTGCCCTaGGAAAATAGTTTAGGTGTT +
Preference number: 5 (lower is better)
Translates to: KPVCVCEHNTELKTFPKVKGHVP*ENSLGV
Trigger: AACACCTAAACTATTTTCCAAGGGCACATGCCCCTT...TACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTTCACATACACAAACAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp CTGCTTGGAGAATTTTGTAGACAGAACTACAAATCCCTTTCCTTAAGTGCGAGTATTAATGTGCTTTGTTaGGGTGCACTTCTTTACCAT +
Preference number: 5 (lower is better)
Translates to: LLGEFCRQNYKSLSLSASINVLC*GALLYH
Trigger: ATGGTAAAGAAGTGCACCCAAACAAAGCACATTAAT...ACTCGCACTTAAGGAAAGGGATTTGTAGTTCTGTCTACAAAATTCTCCAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS-3UTR CAA 90 bp ACAGTCCCATTACAATGTTTGAACCTGAACTGTACAATCAAAGCAATGGATATTAAAACCACTGCTCCTTaGGGGTTGGCTAATATAACA +
Preference number: 5 (lower is better)
Translates to: TVPLQCLNLNCTIKAMDIKTTAP*GLANIT
Trigger: TGTTATATTAGCCAACCCCAAAGGAGCAGTGGTTTT...AATATCCATTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp CCGCGGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTaGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: PRSECPSSCKRLRKA*LGVVSIRRSLLAVG
Trigger: GCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp TCCCGCGGTCTGAGTGCCCCTCCTCCTGTAAGCGGCTaGGCAAAGCTTTGCTGGGGGTCGTCTCCATCCGGA +
Preference number: 6 (lower is better)
Translates to: SRGLSAPPPVSG*AKLCWGSSPSG
Trigger: TCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp CTGTCAGAGCCCTGCACCAGGCCCTGCAGGTCACTGTaGAGGTGGACAGACAAAGCCCGCTTCTGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: LSEPCTRPCRSL*RWTDKARFWRA
Trigger: TGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTTGCTaGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: APPPVSGCAKLC*GSSPSGGHCLR
Trigger: CCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp TTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTaGGGTGGGCTGCCGTCCCTGAGAGCAATATGGAGG +
Preference number: 6 (lower is better)
Translates to: FAGGRLHPEVTA*GGLPSLRAIWR
Trigger: CCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp AGTGCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTTaGTGGGGGTCGTCTCCATCCGGAGGTCACTGCTTG +
Preference number: 6 (lower is better)
Translates to: SAPPPVSGCAKL*WGSSPSGGHCL
Trigger: CAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp TGGGGGTCGTCTCCATCCGGAGGTCACTGCTTGCGGTaGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: WGSSPSGGHCLR*AAVPESNMEER
Trigger: TCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp AGGTCACTGTGCAGGTGGACAGACAAAGCCCGCTTCTaGCGGGCACGCCCTCCTCGGAAACAGCTCAGCATG +
Preference number: 6 (lower is better)
Translates to: RSLCRWTDKARF*RARPPRKQLSM
Trigger: CATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTGCACAGTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp CTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTaGCGGTGGGCTGCCGTCCCTGAGAGCAATATGGAG +
Preference number: 6 (lower is better)
Translates to: LCWGSSPSGGHC*RWAAVPESNME
Trigger: CTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp GAGTGCCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTaGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTT +
Preference number: 6 (lower is better)
Translates to: ECPSSCKRLRKA*LGVVSIRRSLL
Trigger: AAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp AAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTaGTTGCGGTGGGCTGCCGTCCCTGAGAGCAATATG +
Preference number: 6 (lower is better)
Translates to: KLCWGSSPSGGH*LRWAAVPESNM
Trigger: CATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp ATCATGGCTTCACTGTCAGAGCCCTGCACCAGGCCCTaGAGGTCACTGTGCAGGTGGACAGACAAAGCCCGC +
Preference number: 6 (lower is better)
Translates to: IMASLSEPCTRP*RSLCRWTDKAR
Trigger: GCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGAAGCCATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp GCACTCCTCTCCCGGGGACTGCTCTCATACCCGGGGTaGTTCATCATGGCTTCACTGTCAGAGCCCTGCACC +
Preference number: 6 (lower is better)
Translates to: ALLSRGLLSYPG*FIMASLSEPCT
Trigger: GGTGCAGGGCTCTGACAGTGAAGCCATGATGAACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp TGCGCAAAGCTTTGCTGGGGGTCGTCTCCATCCGGAGGTCACTGCTaGCGGTGGGCTGCCGTCCCTGAGAGCAATATGGAGGAGAGATCT +
Preference number: 6 (lower is better)
Translates to: CAKLCWGSSPSGGHC*RWAAVPESNMEERS
Trigger: AGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCCAGCAAAGCTTTGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp ATCCGGAGGTCACTGCTTGCGGTGGGCTGCCGTCCCTaGGAGCAATATGGAGGAGAGATCTCCACTGGGTTG +
Preference number: 6 (lower is better)
Translates to: IRRSLLAVGCRP*EQYGGEISTGL
Trigger: CAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp TATTCAGAAACGCTCCCACTGCTCCCGCGGTCTGAGTaGCCCTCCTCCTGTAAGCGGCTGCGCAAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: YSETLPLLPRSE*PSSCKRLRKAL
Trigger: CAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp GGTACCAATGCCCTCTCGCACTCCTCTCCCGGGGACTaGTCTCATACCCGGGGTTGTTCATCATGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: GTNALSHSSPGD*SHTRGCSSWLH
Trigger: GTGAAGCCATGATGAACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGAGTGCGAGAGGGCATTGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp ACCCATCGTCACCCAGGGAGGAGCTGTCGGAACAGCTaGGCCGGTCGGACTTCTCCATCTTCACTTTCACCT +
Preference number: 6 (lower is better)
Translates to: THRHPGRSCRNS*AGRTSPSSLSP
Trigger: AGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAGCTGTTCCGACAGCTCCTCCCTGGGTGACGATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GGGGGACTCAATGCGACTCCTGACTTCAGCAACGCCTaGGTGGTTTTTCCGCAAGTGCTGGTTGAGGGTACC +
Preference number: 6 (lower is better)
Translates to: GGLNATPDFSNA*VVFPQVLVEGT
Trigger: GGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp ACTGCTTGCGGTGGGCTGCCGTCCCTGAGAGCAATATaGAGGAGAGATCTCCACTGGGTTGGCAAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: TACGGLPSLRAI*RRDLHWVGKEA
Trigger: AGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp ACTGCCACAACTTGTTCCCCATCAACCATCTCGGTGTaGTACCCATCGTCACCCAGGGAGGAGCTGTCGGAA +
Preference number: 6 (lower is better)
Translates to: TATTCSPSTISV*YPSSPREELSE
Trigger: TTCCGACAGCTCCTCCCTGGGTGACGATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp TCTGGCGGGCACGCCCTCCTCGGAAACAGCTCAGCATaGACCTGGATGGGCTGGAATTACTCAAACTTCCAA +
Preference number: 6 (lower is better)
Translates to: SGGHALLGNSSA*TWMGWNYSNFQ
Trigger: TTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp GTGCTGGAGCACAGAACCATAGGAGCCCACATTCACTGCCACAACTaGTTCCCCATCAACCATCTCGGTGTGGTACCCATCGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: VLEHRTIGAHIHCHN*FPINHLGVVPIVTQ
Trigger: CTGGGTGACGATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAATGTGGGCTCCTATGGTTCTGTGCTCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp GCCGGTCGGACTTCTCCATCTTCACTTTCACCTCGGTaGTCTGGCTCTCCCTCACCAATAGGTCTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: AGRTSPSSLSPR*SGSPSPIGLLA
Trigger: AGCAAGGAGACCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp CCTCTATCTGAATCTCATATTCAGAAACGCTCCCACTaGTCCCGCGGTCTGAGTGCCCCTCCTCCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: PLSESHIQKRSH*SRGLSAPPPVS
Trigger: GCTTACAGGAGGAGGGGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTGAATATGAGATTCAGATAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp TCACATAGTTTCCCCTGCAGGCGGAGTTCGTTTAGCTaGCTCAGAACGGTGCTGCTGTACTCGGGCACATCA +
Preference number: 6 (lower is better)
Translates to: SHSFPCRRSSFS*LRTVLLYSGTS
Trigger: TGATGTGCCCGAGTACAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GGGTGGTTTTTCCGCAAGTGCTGGTTGAGGGTACCTTaGAATGGAAAGCACTTCCCGCAGATCTCACAGCGG +
Preference number: 6 (lower is better)
Translates to: GWFFRKCWLRVP*NGKHFPQISQR
Trigger: CCGCTGTGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp TCAGCAACGCCTGGGTGGTTTTTCCGCAAGTGCTGGTaGAGGGTACCTTGGAATGGAAAGCACTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: SATPGWFFRKCW*RVPWNGKHFPQ
Trigger: CTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp CTCCTGACTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGTGCTGGTaGAGGGTACCTTGGAATGGAAAGCACTTCCCGCAGATCTCACAG +
Preference number: 6 (lower is better)
Translates to: LLTSATPGWFFRKCW*RVPWNGKHFPQISQ
Trigger: CTGTGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp ACACATCTGTTCTCTCGGGGGACTCAATGCGACTCCTaGCTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGT +
Preference number: 6 (lower is better)
Translates to: THLFSRGTQCDS*LQQRLGGFSAS
Trigger: ACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGTCCCCCGAGAGAACAGATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GGGCACGCCCTCCTCGGAAACAGCTCAGCATGGACCTaGATGGGCTGGAATTACTCAAACTTCCAAAAGCTT +
Preference number: 6 (lower is better)
Translates to: GHALLGNSSAWT*MGWNYSNFQKL
Trigger: AAGCTTTTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp CCGCAGATCTCACAGCGGAATGGTTTATCATCTGTATaGCCCCGGATGTGGTACTCCAGTTGGTCCTTCCGT +
Preference number: 6 (lower is better)
Translates to: PQISQRNGLSSV*PRMWYSSWSFR
Trigger: ACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp ACTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGTGCTaGTTGAGGGTACCTTGGAATGGAAAGCACTTCCCG +
Preference number: 6 (lower is better)
Translates to: TSATPGWFFRKC*LRVPWNGKHFP
Trigger: CGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp TGGGTGGTTTTTCCGCAAGTGCTGGTTGAGGGTACCTaGGAATGGAAAGCACTTCCCGCAGATCTCACAGCG +
Preference number: 6 (lower is better)
Translates to: WVVFPQVLVEGT*EWKALPADLTA
Trigger: CGCTGTGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp TGTGGGCTCGGAATGGCTGACCCTGAATGTGTACAATaGTGTCACATAGTTTCCCCTGCAGGCGGAGTTCGT +
Preference number: 6 (lower is better)
Translates to: CGLGMADPECVQ*CHIVSPAGGVR
Trigger: ACGAACTCCGCCTGCAGGGGAAACTATGTGACATCATTGTACACATTCAGGGTCAGCCATTCCGAGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp CTGACTTCAGCAACGCCTGGGTGGTTTTTCCGCAAGTaGTGGTTGAGGGTACCTTGGAATGGAAAGCACTTC +
Preference number: 6 (lower is better)
Translates to: LTSATPGWFFRK*WLRVPWNGKHF
Trigger: GAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp CCGTCCCTGAGAGCAATATGGAGGAGAGATCTCCACTaGGTTGGCAAAGAAGCTGCTGTCTTTCACTCCGTT +
Preference number: 6 (lower is better)
Translates to: PSLRAIWRRDLH*VGKEAAVFHSV
Trigger: AACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp TCGGACTTCTCCATCTTCACTTTCACCTCGGTGATCTaGCTCTCCCTCACCAATAGGTCTCCTTGCTCATGG +
Preference number: 6 (lower is better)
Translates to: SDFSIFTFTSVI*LSLTNRSPCSW
Trigger: CCATGAGCAAGGAGACCTATTGGTGAGGGAGAGCCAGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GTTTTTCCGCAAGTGCTGGTTGAGGGTACCTTGGAATaGAAAGCACTTCCCGCAGATCTCACAGCGGAATGG +
Preference number: 6 (lower is better)
Translates to: VFPQVLVEGTLE*KALPADLTAEW
Trigger: CCATTCCGCTGTGAGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTGCGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp CACAGAACCATAGGAGCCCACATTCACTGCCACAACTaGTTCCCCATCAACCATCTCGGTGTGGTACCCATC +
Preference number: 6 (lower is better)
Translates to: HRTIGAHIHCHN*FPINHLGVVPI
Trigger: GATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAATGTGGGCTCCTATGGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp TGGTACTCCAGTTGGTCCTTCCGTGTGTACTTCTTCCCACAGAACTaGCACACAAAGGGGGTGATTCCCATATGGAGTCGCATGTGCCTA +
Preference number: 6 (lower is better)
Translates to: WYSSWSFRVYFFPQN*HTKGVIPIWSRMCL
Trigger: TAGGCACATGCGACTCCATATGGGAATCACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS GCA 72 bp ATGGAGGAGAGATCTCCACTGGGTTGGCAAAGAAGCTaGTGTCTTTCACTCCGTTTCGACTCTCGGGATTCT +
Preference number: 6 (lower is better)
Translates to: MEERSPLGWQRS*CLSLRFDSRDS
Trigger: AGAATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTCTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp CCACAGAACTTGCACACAAAGGGGGTGATTCCCATATaGAGTCGCATGTGCCTATCAAGGCTTCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PQNLHTKGVIPI*SRMCLSRLPFW
Trigger: CCAGAAAGGAAGCCTTGATAGGCACATGCGACTCCATATGGGAATCACCCCCTTTGTGTGCAAGTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp CAGCGGAATGGTTTATCATCTGTATGGCCCCGGATGTaGTACTCCAGTTGGTCCTTCCGTGTGTACTTCTTC +
Preference number: 6 (lower is better)
Translates to: QRNGLSSVWPRM*YSSWSFRVYFF
Trigger: GAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GAATGGAAAGCACTTCCCGCAGATCTCACAGCGGAATaGTTTATCATCTGTATGGCCCCGGATGTGGTACTC +
Preference number: 6 (lower is better)
Translates to: EWKALPADLTAE*FIICMAPDVVL
Trigger: GAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTGCGGGAAGTGCTTTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp AGTTGGTCCTTCCGTGTGTACTTCTTCCCACAGAACTaGCACACAAAGGGGGTGATTCCCATATGGAGTCGC +
Preference number: 6 (lower is better)
Translates to: SWSFRVYFFPQN*HTKGVIPIWSR
Trigger: GCGACTCCATATGGGAATCACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp GCGGAATGGTTTATCATCTGTATGGCCCCGGATGTGGTACTCCAGTaGGTCCTTCCGTGTGTACTTCTTCCCACAGAACTTGCACACAAA +
Preference number: 6 (lower is better)
Translates to: AEWFIICMAPDVVLQ*VLPCVLLPTELAHK
Trigger: TTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp ACCAATAGGTCTCCTTGCTCATGGTCTCCCTCTATCTaGATCTCATATTCAGAAACGCTCCCACTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: TNRSPCSWSPSI*ISYSETLPLLP
Trigger: CGGGAGCAGTGGGAGCGTTTCTGAATATGAGATTCAGATAGAGGGAGACCATGAGCAAGGAGACCTATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp TTATCATCTGTATGGCCCCGGATGTGGTACTCCAGTTaGTCCTTCCGTGTGTACTTCTTCCCACAGAACTTG +
Preference number: 6 (lower is better)
Translates to: LSSVWPRMWYSS*SFRVYFFPQNL
Trigger: CAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp AATGGATGCTCTCTAGGATCTGCGTGCACTTGTCAATaGCACACTGCATCTGAAGAAAGCTGGCTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: NGCSLGSACTCQ*HTASEESWLQS
Trigger: TGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 72 bp TTTATCATCTGTATGGCCCCGGATGTGGTACTCCAGTaGGTCCTTCCGTGTGTACTTCTTCCCACAGAACTT +
Preference number: 6 (lower is better)
Translates to: FIICMAPDVVLQ*VLPCVLLPTEL
Trigger: AAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAGTACCACATCCGGGGCCATACAGATGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CAA 90 bp TCTTCAGCACCGACGGTAACAGAGTCAACATCTCCAACGCTGATTTaGGAATGGATGCTCTCTAGGATCTGCGTGCACTTGTCAATGACA +
Preference number: 6 (lower is better)
Translates to: SSAPTVTESTSPTLI*EWMLSRICVHLSMT
Trigger: TGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCTGTTACCGTCGGTGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp CTCAGAACGGTGCTGCTGTACTCGGGCACATCAAACTaGATAAAACTGCTGCTGTCCATTTCTACTGACATG +
Preference number: 6 (lower is better)
Translates to: LRTVLLYSGTSN*IKLLLSISTDM
Trigger: CATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTACAGCAGCACCGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS TCA 72 bp AGGATCTGCGTGCACTTGTCAATGACACACTGCATCTaGAGAAAGCTGGCTGCAGTCAGAAAACTGACAACA +
Preference number: 6 (lower is better)
Translates to: RICVHLSMTHCI*RKLAAVRKLTT
Trigger: TGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2
CDS CCA 72 bp GTAACAGAGTCAACATCTCCAACGCTGATTTTGGAATaGATGCTCTCTAGGATCTGCGTGCACTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: VTESTSPTLILE*MLSRICVHLSM
Trigger: CATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319119.4
ENST00000373452.2