RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB32 (Homo sapiens)

Ensembl gene IDs: ENSG00000011590

Ensembl transcript IDs: ENST00000262630.7, ENST00000392197.7, ENST00000426659.6, ENST00000442282.1, ENST00000451726.1, ENST00000481182.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGCCAGGCTaGGACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCC +
Preference number: 1 (lower is better)
Translates to: GWASDRACAPAWRPG*DSRPRTGSSGTERP
Trigger: GGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 90 bp AGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: SRGRWSGWSIRAGVG*ASDRACAPAWRPGW
Trigger: CCAGCCTGGCCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 90 bp AGGGCCGAGACGGCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTTGGCTGGGCGAGTGACCGCGCATGT +
Preference number: 1 (lower is better)
Translates to: RAETASRRSRGRWSG*SIRAGVGWASDRAC
Trigger: ACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGTCTCGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 90 bp GAGAGGTCGAGGGCCGAGACGGCCTCGAGGAGGAGTAGAGGAAGGTaGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTGGGCGAGTGAC +
Preference number: 1 (lower is better)
Translates to: ERSRAETASRRSRGR*SGWSIRAGVGWASD
Trigger: GTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGTCTCGGCCCTCGACCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 90 bp CCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTC +
Preference number: 1 (lower is better)
Translates to: PSLLHTSVSSLCRAR*PGLLRPAIVQERAL
Trigger: GAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR GCA 90 bp ATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTaGACACTTCAGTGTCCTCACTCTGTAGGGCTCGCTGGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: MVMRSTISPTVNLRS*TLQCPHSVGLAGLG
Trigger: GCCCAGGCCAGCGAGCCCTACAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR TCA 90 bp CCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCAAGTCCCGGGAGCGCTaGGGACAAAGGCTACAGGAG +
Preference number: 2 (lower is better)
Translates to: PAPHREQRYGAAPCVRRCKSRER*GQRLQE
Trigger: CTCCTGTAGCCTTTGTCCTCAGCGCTCCCGGGACTT...GCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CAA 90 bp GAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCG +
Preference number: 2 (lower is better)
Translates to: ERALGALPGALLGRN*LGRRSSGARSEAEP
Trigger: CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR CCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGT +
Preference number: 2 (lower is better)
Translates to: LGRRSSGARSEAEPARFSRAGVG*ASDRAC
Trigger: ACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCG...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CAA 90 bp GGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTaGGCTGGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GGVEEGGADGPSGRE*AGRVTAHVRLHGGQ
Trigger: CTGGCCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR TCA 90 bp AGACGGCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGAGTTGGCTGGGCGAGTaGCCGCGCATGTGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: RRPRGGVEEGGADGPSGRSWLGE*PRMCAC
Trigger: GCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACT...CCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR CCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAACTCGGCGCCCTTCCTaGGGCGCTTCTGGGGCGGAA +
Preference number: 2 (lower is better)
Translates to: ALLGRNLLGRRSSGARSETRRPS*GASGAE
Trigger: TTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGT...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR CCA 90 bp GACTCTTGGCTAAGACGCTACCGACACCCCGTCAGGTGGTGGAGGAAGAAGGACGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: DSWLRRYRHPVRWWRKKDGRWSG*SIRAGV
Trigger: AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCC...GTCCTTCTTCCTCCACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGCTGGCCTGGGCTTCTaGGACCCGCGATCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLAGLGF*DPRSSR
Trigger: CCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACACTCGGCGCCCTTCCTaGGGCGCTTCTGGGGCGGAA +
Preference number: 2 (lower is better)
Translates to: STISPTVNLRSCTLQCPHTRRPS*GASGAE
Trigger: TTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGT...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CAA 90 bp GGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACACCCCGTCAGGTGGTGGAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GQKPSRPAFRSLIGL*AKTLPTPRQVVEEE
Trigger: TTCTTCCTCCACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR TCA 90 bp GACTCTTGGCTAAGACGCTACCGACACCCCGTCAGGTGGTGGAGGAAGAAGGACTCTCCATCTGATGCTTaGGTGAAAACCTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: DSWLRRYRHPVRWWRKKDSPSDA*VKTSFH
Trigger: GTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGA...GTCCTTCTTCCTCCACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR CCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCCTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCC +
Preference number: 2 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRLCRAR*PGLLRP
Trigger: GGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CCA 72 bp AGTGACCGCGCATGTGCGCCTGCATGGAGGCCAGGCTaGGACAGCCGGCCCCGCACAGGGAGCAGCGGTACG +
Preference number: 3 (lower is better)
Translates to: SDRACAPAWRPG*DSRPRTGSSGT
Trigger: CGTACCGCTGCTCCCTGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGCAGGCGCACATGCGCGGTCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR CAA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGCTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQLLGRN*LGRRSS
Trigger: GCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAG...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 72 bp AGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGG +
Preference number: 3 (lower is better)
Translates to: RWSGWSIRAGVG*ASDRACAPAWR
Trigger: CCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 72 bp AGGGCCGAGACGGCCTCGAGGAGGAGTAGAGGAAGGTaGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: RAETASRRSRGR*SGWSIRAGVGW
Trigger: CCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGTCTCGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR-3UTR CAA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: LPGALLGRNLLGRRSSGALLGRN*LGRRSS
Trigger: GCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CCA 72 bp ACGGCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTTGGCTGGGCGAGTGAC +
Preference number: 3 (lower is better)
Translates to: TASRRSRGRWSG*SIRAGVGWASD
Trigger: GTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
3UTR CCA 72 bp CTGCACACTTCAGTGTCCTCACTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: LHTSVSSLCRAR*PGLLRPAIVQE
Trigger: CTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAGTGAGGACACTGAAGTGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR CAA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACA +
Preference number: 3 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSASLIGL*AKTLPT
Trigger: TGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGA...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR GCA 72 bp AGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTaGACACTTCAGTGTCCTCACTCTGTAGGGCTCGCT +
Preference number: 3 (lower is better)
Translates to: RSTISPTVNLRS*TLQCPHSVGLA
Trigger: AGCGAGCCCTACAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR-3UTR CAA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACA +
Preference number: 3 (lower is better)
Translates to: STISPTVNLRSCTLQCPHSLIGL*AKTLPT
Trigger: TGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGA...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGGCCCAGCTGCTGGCTaGCACCTGCTAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQGPAAG*HLLAPG
Trigger: GCCTGGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCC...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGCGGCATCAGCAGGATaGTCCACAGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQAASAG*STGQAG
Trigger: GCCAGCCTGCCCTGTGGAGCATCCTGCTGATGCCGC...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGGCCCTGGCCGCCTCCTaGAGGGGCCTTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSAALAAS*RGLSSP
Trigger: TGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGC...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAGGCTGGGACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGGGCGGGGAACTCCTaGCTCCCTACGGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: QAGTAGPAQGAAVRSGPVWAGNS*LPTVIR
Trigger: TCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCA...CACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGTCCCAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGTTGCAGGGAGCCTGCTaGGGGAAGGGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRLQGAC*GKGARE
Trigger: CTCCCTGGCCCCCTTCCCCCAGCAGGCTCCCTGCAA...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCCCTTCCACTCGGCGCCCTTCCTaGGGCGCTTCTGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: AWASATRDRPGEGTRRPSTRRPS*GASGAE
Trigger: TTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGT...GGAAGGGCGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGGGCCCAGCTGCTGGCTaGCACCTGCTAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSGPAAG*HLLAPG
Trigger: GCCTGGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCC...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACAGTTGGCTGGGCGAGTaGCCGCGCATGTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHSWLGE*PRMCAC
Trigger: GCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACT...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGTCGAGCCCTCCAGCATaGCTCTTCCAGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQSSPPA*LFQGLH
Trigger: GTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGA...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCTCTCCCAGAGCCCACTaGCCCCTGCGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGASPRAH*PLRPSC
Trigger: GCAGCTGGGCCGCAGGGGCCAGTGGGCTCTGGGAGA...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGCCATCTGCTCCCCTTTaGCCAACAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQPSAPL*PTGAWR
Trigger: CCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGG...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCTTGCAGGGAGCCTGCTaGGGGAAGGGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRLQGAC*GKGARE
Trigger: CTCCCTGGCCCCCTTCCCCCAGCAGGCTCCCTGCAA...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGAGGGTGCGGGCGAGGTaGGCAGCCTGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: EGTRRPSWGASGAEFARPRVRAR*AACLVL
Trigger: GAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCCT...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp ATCCGGGCGGGAGTTGGCTGGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGAGGGTGCGGGCGAGGTaGGCAGCCTGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IRAGVGWASDRACAPAWRRVRAR*AACLVL
Trigger: GAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCCT...CCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp ATCCGGGCGGGAGTTGGCTGGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGT +
Preference number: 4 (lower is better)
Translates to: IRAGVGWASDRACAPAWRRAGVG*ASDRAC
Trigger: ACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCG...CCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGGCCCAGCTGCTGGCTaGCACCTGCTAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPGPAAG*HLLAPG
Trigger: GCCTGGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCC...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGGCCCTGGCCGCCTCCTaGAGGGGCCTTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARALAAS*RGLSSP
Trigger: TGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGC...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCCCTGGCCGCCTCCTaGAGGGGCCTTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERALAAS*RGLSSP
Trigger: TGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGC...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGGGGGGCCAGGGAGCTTaGGCAGACTTTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRGGQGA*ADFPQS
Trigger: GCTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCC...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGGCGGCATCAGCAGGATaGTCCACAGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSAASAG*STGQAG
Trigger: GCCAGCCTGCCCTGTGGAGCATCCTGCTGATGCCGC...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCCGCGCATGTGCGCCTaGATGGAGGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGAPRMCA*MEARLG
Trigger: TCCCAGCCTGGCCTCCATGCAGGCGCACATGCGCGG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCGTGCTGGCCGGAGCCTaGCTGCTAGCTGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRVLAGA*LLAVPA
Trigger: GGCTGGTACAGCTAGCAGCCAGGCTCCGGCCAGCAC...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCCCTTCCGCGCCTGTGTGCCCCTaGTCAGACTCTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AWASATRDRPGEGTRRPSAPVCP*SDSSIS
Trigger: GGAGATGGAAGAGTCTGATCAGGGGCACACAGGCGC...GGAAGGGCGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR GCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCTCCTGCGTTGCTCCTaGCATCTCGGGTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRLLRCS*HLGSAS
Trigger: AGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAG...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCTGAGCCTCCTGCGTTaGTCCTGCCATCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSALSLLR*SCHLGS
Trigger: AGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAG...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCTGCGGCCCAGCTGCTaGCTGACACCTGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGALRPSC*LTPAST
Trigger: GGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTGGGCGAGTGTTGCAGGGAGCCTGCTaGGGGAAGGGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VEEGGADGPSGRELAGRVLQGAC*GKGARE
Trigger: CTCCCTGGCCCCCTTCCCCCAGCAGGCTCCCTGCAA...CACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCATGTGCGCCTGCATaGAGGCCAGGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPACAPA*RPGWDS
Trigger: GCTGTCCCAGCCTGGCCTCCATGCAGGCGCACATGC...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: CRARWPGLLRPAIVQERALCRAR*PGLLRP
Trigger: GGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CAA 72 bp CTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGALPGALLGRN*LGRRSSGARSE
Trigger: TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CAA 72 bp GAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTaGGCTGGGCGAGTGACCGCGCATGTGCGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: EEGGADGPSGRE*AGRVTAHVRLH
Trigger: ATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp ACAGCCGGCCCCGCACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGTGTGAGGTCCATGGTTaGAAGGGGAGGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: TAGPAQGAAVRSGPVCPQCEVHG*KGREEH
Trigger: ATGTTCCTCCCTCCCCTTTCAACCATGGACCTCACA...CTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCTGGTCTGTTCCTGCTaGGCCTCCTGCGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRLVCSC*ASCVAP
Trigger: AGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAG...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGAAGTCCCGGGAGCGCTaGGGACAAAGGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: EGTRRPSWGASGAEFARPKSRER*GQRLQE
Trigger: CTCCTGTAGCCTTTGTCCTCAGCGCTCCCGGGACTT...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGAAGTCCCGGGAGCGCTaGGGACAAAGGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSKSRER*GQRLQE
Trigger: CTCCTGTAGCCTTTGTCCTCAGCGCTCCCGGGACTT...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAACCCCTGCGGCCCAGCTaGTGGCTGACACCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEPLRPS*WLTPAS
Trigger: GCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAGGGG...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCTCGAGCCCTCCAGCATaGCTCTTCCAGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRSSPPA*LFQGLH
Trigger: GTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGA...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACCTGCCATCTCGGGTCTaGCTCTTGGTGGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHLPSRV*LLVASA
Trigger: AGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAG...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTTCCCGCCAGACCTCCTaGCAGGCTCCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASRRSRGRWSGWSIRAGVSRQTS*QAPVVG
Trigger: CCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGA...AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGCGCACAGGTTGCAAGTaGGCCTGTGTGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSRTGCK*ACVPLI
Trigger: GATCAGGGGCACACAGGCGCACTTGCAACCTGTGCG...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGGGCTCCAGAGCCCTTTaGGGGCATTTAGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRGSRAL*GHLGTV
Trigger: CACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCC...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPGRWSG*SIRAGV
Trigger: AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCC...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp ACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TGSSGTERPRVSAGAWSWGRWSG*SIRAGV
Trigger: AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCC...CCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCCTGGCTCCCTACGGTaGTCAGAGTATCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSAPGSLR*SEYHRV
Trigger: CACTCTGTGATACTCTGATCACCGTAGGGAGCCAGG...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGTCGAGCCCTCCAGCATaGCTCTTCCAGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARSSPPA*LFQGLH
Trigger: GTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGA...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGACCTGTTCTGGTTTCTaGTTCTCTCCAGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSATCSGF*FSPGSP
Trigger: GGGGGACCCTGGAGAGAAGCAGAAACCAGAACAGGT...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTGAGCCTCCTGCGTTaGTCCTGCCATCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: CRARWPGLLRPAIVQERALSLLR*SCHLGS
Trigger: AGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAG...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGCCGAATGACCCGCACAGGTTaGAAGTGCGCCTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GAAVRSGPVCPQVLGHGRMTRTG*KCASVP
Trigger: GGGAACAGAGGCGCACTTGCAACCTGTGCGGGTCAT...TCGGCCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGGCTGGGCAGTCTTATaGGGGGCAGGGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPGWAVL*GAGTLC
Trigger: GCACAATGTCCCTGCCCCCCATAAGACTGCCCAGCC...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGGGCTGGGCAGTCTTATaGGGGGCAGGGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARGWAVL*GAGTLC
Trigger: GCACAATGTCCCTGCCCCCCATAAGACTGCCCAGCC...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGTGCTGGCCGGAGCCTaGCTGCTAGCTGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEVLAGA*LLAVPA
Trigger: GGCTGGTACAGCTAGCAGCCAGGCTCCGGCCAGCAC...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCTTCAGGCCTGGATCTaGCTTTTTAGCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSALQAWI*LFSPVP
Trigger: GGGGACAGGGCTAAAAAGCCAGATCCAGGCCTGAAG...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACCATCTGCTCCCCTTTaGCCAACAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CRARWPGLLRPAIVQERAPSAPL*PTGAWR
Trigger: CCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGG...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACGGCTCCAGAGCCCTTTaGGGGCATTTAGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHGSRAL*GHLGTV
Trigger: CACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCC...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGAGGCCAACTGGTTCTaGCTCCAGAGCCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQEREANWF*LQSPLG
Trigger: CCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTC...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGAGGAGTAGAGGAAGGTaGAGCGGATGGTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: EGTRRPSWGASGAEFARPRSRGR*SGWSIR
Trigger: CCGGATGGACCATCCGCTCCACCTTCCTCTACTCCT...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTCTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: ASRRSRGRWSGWSIRAGVLCRAR*PGLLRP
Trigger: GGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG...AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGGAGGCGTTTCTCCTTTaGCCTGGTCTGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSEAFLL*PGLFLL
Trigger: CAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTC...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCGAGGCGTTTCTCCTTTaGCCTGGTCTGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGREAFLL*PGLFLL
Trigger: CAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTC...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGGGTGGCGAGTGCTTGTaGAACATCTCCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRGGECL*NISCSL
Trigger: GAGAGAACAGGAGATGTTGCACAAGCACTCGCCACC...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCCATGCTTCCCATCTaGTCCCCTTTGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHSMLPI*SPLANR
Trigger: CCTGTTGGCCAAAGGGGAGCAGATGGGAAGCATGGA...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGCCGAGGGTCTGCCTCTTGGTaGCGAGTGCTTGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: GAAVRSGPVCPQVLGHGRGSASW*RVLVQH
Trigger: ATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCC...TCGGCCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp AATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCCTCGGGTCTGCCTCTTaGTGGCGAGTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: NLLGRRSSGARSEAEPARLGSAS*WRVLVQ
Trigger: TTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAG...GCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTGGCCAACAGGGGCTTaGAGGCGTTTCTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHWPTGA*RRFSFD
Trigger: GTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCA...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGCCCTTCCTTCCTCAGAGCCCCCTaGATTTTCCCTCAACCACGT +
Preference number: 4 (lower is better)
Translates to: AWASATRDRPGEGTRRPSFLRAP*IFPQPR
Trigger: ACGTGGTTGAGGGAAAATCCAGGGGGCTCTGAGGAA...GGAAGGGCGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCAAGGAGTAGAGGAAGGTaGAGCGGATGGTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: CRARWPGLLRPAIVQERARSRGR*SGWSIR
Trigger: CCGGATGGACCATCCGCTCCACCTTCCTCTACTCCT...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGAGGAGTAGAGGAAGGTaGAGCGGATGGTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARRSRGR*SGWSIR
Trigger: CCGGATGGACCATCCGCTCCACCTTCCTCTACTCCT...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGCACCCCGTCAGGTGGTaGAGGAAGAAGGACAACAGG +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERHPVRW*RKKDNR
Trigger: CCTGTTGTCCTTCTTCCTCCACCACCTGACGGGGTG...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGCGACACCCCGTCAGGTaGTGGAGGAAGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERRHPVR*WRKKDN
Trigger: GTTGTCCTTCTTCCTCCACCACCTGACGGGGTGTCG...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCAGGAAGTCCACAGTGTaGGGTCCATGGTTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRRKSTV*GPWLKG
Trigger: CCCTTTCAACCATGGACCTCACACTGTGGACTTCCT...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGCCTGGCTCCCTACGGTaGTCAGAGTATCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPPGSLR*SEYHRV
Trigger: CACTCTGTGATACTCTGATCACCGTAGGGAGCCAGG...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGTTCTCTGGCTCCTCCTaGTGTTTCTTCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EGTRRPSWGASGAEFARPFSGSS*CFFRPG
Trigger: TCCAGGCCTGAAGAAACATCAGGAGGAGCCAGAGAA...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGAGGCGTTTCTCCTTTaGCCTGGTCTGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQEREAFLL*PGLFLL
Trigger: CAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTC...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGACCTGTTCTGGTTTCTaGTTCTCTCCAGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERTCSGF*FSPGSP
Trigger: GGGGGACCCTGGAGAGAAGCAGAAACCAGAACAGGT...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTCCATGCTTCCCATCTaGTCCCCTTTGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: NLLGRRSSGARSEAEPARSMLPI*SPLANR
Trigger: CCTGTTGGCCAAAGGGGAGCAGATGGGAAGCATGGA...GCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGCACGTGAGCACTCCATaGTTCCCATCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERHVSTP*FPSAPL
Trigger: AAGGGGAGCAGATGGGAAGCATGGAGTGCTCACGTG...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGALQWWG*YGRREC
Trigger: GCATTCCCTTCTACCATAGCACCCCCACCACTGGAG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GACTCTTGGCTAAGACGCTACCGACACCCCGTCAGGTGGTGGAGGAAGAAGGACCCGCGCATGTGCGCCTaGATGGAGGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DSWLRRYRHPVRWWRKKDPRMCA*MEARLG
Trigger: TCCCAGCCTGGCCTCCATGCAGGCGCACATGCGCGG...GTCCTTCTTCCTCCACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGGTTAACCTTCGCTCCTaGACACTTCAGTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSAVNLRS*TLQCPH
Trigger: GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAAC...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCATTGTGCCTTGGCTTaGGTACCTAACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSLAWASATRDRPGEGTRHCALA*VPNSEA
Trigger: AGCCTCTGAGTTAGGTACCCAAGCCAAGGCACAATG...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGAGGGACATTGTGCCTTaGCTTGGGTACCTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSARDIVP*LGYLTQ
Trigger: CTGAGTTAGGTACCCAAGCCAAGGCACAATGTCCCT...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAATGGGCGGGGAACTCCTaGCTCCCTACGGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEWAGNS*LPTVIR
Trigger: TCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCA...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTCTCCCAGAGCCCACTaGCCCCTGCGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGSPRAH*PLRPSC
Trigger: GCAGCTGGGCCGCAGGGGCCAGTGGGCTCTGGGAGA...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTGCACTCCCAAGGCCCTaGCCGCCTCCTGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTALPRP*PPPEGA
Trigger: GGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGC...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTTCCTCAGAGCCCCCTaGATTTTCCCTCAACCACGT +
Preference number: 4 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHFLRAP*IFPQPR
Trigger: ACGTGGTTGAGGGAAAATCCAGGGGGCTCTGAGGAA...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCCTCAGAGCCCCCTaGATTTTCCCTCAACCACGT +
Preference number: 4 (lower is better)
Translates to: LGRRSSGARSEAEPARFSFLRAP*IFPQPR
Trigger: ACGTGGTTGAGGGAAAATCCAGGGGGCTCTGAGGAA...CGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCTGTGAGGTCCATGGTTaGAAGGGGAGGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGACEVHG*KGREEH
Trigger: ATGTTCCTCCCTCCCCTTTCAACCATGGACCTCACA...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGTCTCTCAGGATTCCTTaGGGGTTTCTCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARSLRIP*GFLWLL
Trigger: GAGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGA...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp ACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGTCTCTCAGGATTCCTTaGGGGTTTCTCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGSSGTERPRVSAGAWSWSLRIP*GFLWLL
Trigger: GAGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGA...CCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCTGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGTTTCCCTCAACCACGTaGGCACTCCATGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCRARWPGLLRPAIVQERFPSTT*ALHASH
Trigger: ATGGGAAGCATGGAGTGCTCACGTGGTTGAGGGAAA...CCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTAGTTGGCTGGGCGAGTaGCCGCGCATGTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTSWLGE*PRMCAC
Trigger: GCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACT...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTAGTTGGCTGGGCGAGTaGCCGCGCATGTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VAAVPGQKPSRPAFRSLISWLGE*PRMCAC
Trigger: GCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACT...AATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCCCCTGCGGCCCAGCTaGTGGCTGACACCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTPLRPS*WLTPAS
Trigger: GCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAGGGG...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCGCTGGCCTGGGCTTCTaGGACCCGCGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGAGLGF*DPRSSR
Trigger: CCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGC...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGCCGAAGGGACATTGTGCCTTaGCTTGGGTACCTAACTCAG +
Preference number: 4 (lower is better)
Translates to: GAAVRSGPVCPQVLGHGRRDIVP*LGYLTQ
Trigger: CTGAGTTAGGTACCCAAGCCAAGGCACAATGTCCCT...TCGGCCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCACAAAGTTCAGGAGCTaGGCAAAGGTAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RALGALPGALLGRNLLGRTKFRS*AKVEGL
Trigger: CAGCCCTTCTACCTTTGCCCAGCTCCTGAACTTTGT...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp ATCCGGGCGGGAGTTGGCTGGGCGAGTGACCGCGCATGTGCGCCTGCATGGAGGACAAAGTTCAGGAGCTaGGCAAAGGTAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: IRAGVGWASDRACAPAWRTKFRS*AKVEGL
Trigger: CAGCCCTTCTACCTTTGCCCAGCTCCTGAACTTTGT...CCTCCATGCAGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGGCATGGAGGCCAGGCTaGGACAGCCGGCCCCGCACA +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPAWRPG*DSRPRT
Trigger: TGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGC...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCATGGAGGCCAGGCTaGGACAGCCGGCCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLAWRPG*DSRPRT
Trigger: TGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGC...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAACCTGGCTCCCTACGGTaGTCAGAGTATCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEPGSLR*SEYHRV
Trigger: CACTCTGTGATACTCTGATCACCGTAGGGAGCCAGG...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGCCCCTGCGGCCCAGCTaGTGGCTGACACCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLPLRPS*WLTPAS
Trigger: GCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAGGGG...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAACCTCTTTCCACAGACAGAGCACGCATAGGGCCGAGACCGAGCAGGAGGGGCCTGAGCCTCCTGCGTTaGTCCTGCCATCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KPLSTDRARIGPRPSRRGLSLLR*SCHLGS
Trigger: AGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAG...GCCCCTCCTGCTCGGTCTCGGCCCTATGCGTGCTCTGTCTGTGGAAAGAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGTATGGTAGAAGGGAATaGCATATCTGGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: EGTRRPSWGASGAEFARPYGRRE*HIWAAS
Trigger: TGATGCCGCCCAGATATGGCATTCCCTTCTACCATA...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGCGAGGTGGGCAGCCTaGCTTGTCCTCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: VAAVPGQKPSRPAFRSLIARWAA*LVLMTR
Trigger: GCGGGTCATGAGGACAAGGCAGGCTGCCCACCTCGC...AATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGCCGCGCATGTGCGCCTaGATGGAGGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPPRMCA*MEARLG
Trigger: TCCCAGCCTGGCCTCCATGCAGGCGCACATGCGCGG...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGGCTGGCCTGGGCTTCTaGGACCCGCGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPAGLGF*DPRSSR
Trigger: CCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGC...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGTCTCCCAGAGCCCACTaGCCCCTGCGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTSPRAH*PLRPSC
Trigger: GCAGCTGGGCCGCAGGGGCCAGTGGGCTCTGGGAGA...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GGAGAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGACAAAGTTCAGGAGCTaGGCAAAGGTAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGTRRPSWGASGAEFARTKFRS*AKVEGL
Trigger: CAGCCCTTCTACCTTTGCCCAGCTCCTGAACTTTGT...CCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCGTCTAGAAACCTGTTCTaGTTTCTGCTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGLGFCDPRSSRRGHSASRNLF*FLLLSR
Trigger: CCTGGAGAGAAGCAGAAACCAGAACAGGTTTCTAGA...CGCCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAATGGCCAACAGGGGCTTaGAGGCGTTTCTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEWPTGA*RRFSFD
Trigger: GTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCA...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAACCTCTTTCCACAGACAGAGCACGCATAGGGCCGAGACCGAGCAGGAGGGGCGCCAGGCTCCAGTGGTaGGGGTGCTATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KPLSTDRARIGPRPSRRGARLQW*GCYGRR
Trigger: CCTTCTACCATAGCACCCCCACCACTGGAGCCTGGC...GCCCCTCCTGCTCGGTCTCGGCCCTATGCGTGCTCTGTCTGTGGAAAGAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGACTCGGCGCCCTTCCTaGGGCGCTTCTGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLTRRPS*GASGAE
Trigger: TTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGT...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTTTTCCCTCAACCACGTaGGCACTCCATGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ASRRSRGRWSGWSIRAGVFPSTT*ALHASH
Trigger: ATGGGAAGCATGGAGTGCTCACGTGGTTGAGGGAAA...AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR TCA 90 bp AAACCTCTTTCCACAGACAGAGCACGCATAGGGCCGAGACCGAGCAGGAGGGGCCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: KPLSTDRARIGPRPSRRGPALSS*PAQVAS
Trigger: ACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGG...GCCCCTCCTGCTCGGTCTCGGCCCTATGCGTGCTCTGTCTGTGGAAAGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGGCGGCATCAGCAGGATaGTCCACAGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPAASAG*STGQAG
Trigger: GCCAGCCTGCCCTGTGGAGCATCCTGCTGATGCCGC...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCTATGGTAGAAGGGAATaGCATATCTGGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGAYGRRE*HIWAAS
Trigger: TGATGCCGCCCAGATATGGCATTCCCTTCTACCATA...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGGCGAGGTGGGCAGCCTaGCTTGTCCTCATGACCCGC +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPARWAA*LVLMTR
Trigger: GCGGGTCATGAGGACAAGGCAGGCTGCCCACCTCGC...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AGACGGCCTCGAGGAGGAGTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGTTAACCTTCGCTCCTaGACACTTCAGTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RRPRGGVEEGGADGPSGRVNLRS*TLQCPH
Trigger: GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAAC...CCGCCCGGATGGACCATCCGCTCCACCTTCCTCTACTCCTCCTCGAGGCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGCATGGAGGCCAGGCTaGGACAGCCGGCCCCGCACA +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLAWRPG*DSRPRT
Trigger: TGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGT +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTRAGVG*ASDRAC
Trigger: ACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCCTGGTCTGTTCCTGCTaGGCCTCCTGCGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGLVCSC*ASCVAP
Trigger: AGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAG...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGCGCCTGTGTGCCCCTaGTCAGACTCTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: VAAVPGQKPSRPAFRSLIAPVCP*SDSSIS
Trigger: GGAGATGGAAGAGTCTGATCAGGGGCACACAGGCGC...AATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGTCCCGCCAGACCTCCTaGCAGGCTCCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLSRQTS*QAPVVG
Trigger: CCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGA...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACGCTGGCCTGGGCTTCTaGGACCCGCGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHAGLGF*DPRSSR
Trigger: CCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGC...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGTTAACCTTCGCTCCTaGACACTTCAGTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEVNLRS*TLQCPH
Trigger: GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAAC...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGGCACTCCCAAGGCCCTaGCCGCCTCCTGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQALPRP*PPPEGA
Trigger: GGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGC...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCATGTTTCTTCAGGCCTaGATCTGGCTTTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPGALLGRNLLGRRSSGAMFLQA*IWLFSP
Trigger: AGGGCTAAAAAGCCAGATCCAGGCCTGAAGAAACAT...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCGGGCGGGAGTTGGCTaGGCGAGTGACCGCGCATGT +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLRAGVG*ASDRAC
Trigger: ACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCG...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGGGAAGGTGGAGCGGATaGTCCATCCGGGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPGRWSG*SIRAGV
Trigger: AACTCCCGCCCGGATGGACCATCCGCTCCACCTTCC...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTCTGTAGGGCTCGCTaGCCTGGGCTTCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTLCRAR*PGLLRP
Trigger: GGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACAGAG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTAGAGGAAGGTGGAGCGGATGGTCCATCCGGGCGGGAGTTGGCTGGGCGAGTGTCTCCATCTGATGCTTaGGTGAAAACCTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: VEEGGADGPSGRELAGRVSPSDA*VKTSFH
Trigger: GTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGA...CACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp ACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTTCCCGCCAGACCTCCTaGCAGGCTCCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TISPTVNLRSCTLQCPHSSRQTS*QAPVVG
Trigger: CCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGA...AGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGCGCACAGGTTGCAAGTaGGCCTGTGTGCCCCTGATC +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPRTGCK*ACVPLI
Trigger: GATCAGGGGCACACAGGCGCACTTGCAACCTGTGCG...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR GCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGATGACCCGCACAGGTTaGAAGTGCGCCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLMTRTG*KCACVP
Trigger: GGGCACACAGGCGCACTTGCAACCTGTGCGGGTCAT...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGTGCTGGCCGGAGCCTaGCTGCTAGCTGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLVLAGA*LLAVPA
Trigger: GGCTGGTACAGCTAGCAGCCAGGCTCCGGCCAGCAC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCTGCGGCCCAGCTGCTaGCTGACACCTGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHLRPSC*LTPAST
Trigger: GGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGCATGTGCGCCTGCATaGAGGCCAGGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLACAPA*RPGWDS
Trigger: GCTGTCCCAGCCTGGCCTCCATGCAGGCGCACATGC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCACCCCGTCAGGTGGTaGAGGAAGAAGGACAACAGG +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTHPVRW*RKKDNR
Trigger: CCTGTTGTCCTTCTTCCTCCACCACCTGACGGGGTG...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
3UTR CAA 72 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACACCCCGTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGL*AKTLPTPRQVV
Trigger: CACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR GCA 90 bp CTCTTGGCTAAGACGCTACCGACACCCCGTCAGGTGGTGGAGGAAGAAGGACAACACGTGAGCACTCCATaGTTCCCATCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLAKTLPTPRQVVEEEGQHVSTP*FPSAPL
Trigger: AAGGGGAGCAGATGGGAAGCATGGAGTGCTCACGTG...TTGTCCTTCTTCCTCCACCACCTGACGGGGTGTCGGTAGCGTCTTAGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CCA 90 bp ACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTCTGCGGCCCAGCTGCTaGCTGACACCTGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: TISPTVNLRSCTLQCPHSLRPSC*LTPAST
Trigger: GGTGCTAGCAGGTGTCAGCCAGCAGCTGGGCCGCAG...AGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCCTTCAGGCCTGGATCTaGCTTTTTAGCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGLQAWI*LFSPVP
Trigger: GGGGACAGGGCTAAAAAGCCAGATCCAGGCCTGAAG...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGGTCTGCCTCTTGGTaGCGAGTGCTTGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: VAAVPGQKPSRPAFRSLIGSASW*RVLVQH
Trigger: ATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCC...AATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTAGGGAATGCCATATCTaGGCGGCATCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTRECHI*AASAGC
Trigger: GCATCCTGCTGATGCCGCCCAGATATGGCATTCCCT...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTCGACACCCCGTCAGGTaGTGGAGGAAGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLARHPVR*WRKKDN
Trigger: GTTGTCCTTCTTCCTCCACCACCTGACGGGGTGTCG...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTPALSS*PAQVAS
Trigger: ACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGAAGTCCCGGGAGCGCTaGGGACAAAGGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLKSRER*GQRLQE
Trigger: CTCCTGTAGCCTTTGTCCTCAGCGCTCCCGGGACTT...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCCATCTCGGGTCTaGCTCTTGGTGGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RQSPLLLTFAPAHFSVLTLPSRV*LLVASA
Trigger: AGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAG...AGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCTCCTGCGTTGCTCCTaGCATCTCGGGTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLLLRCS*HLGSAS
Trigger: AGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAG...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGCACGTGAGCACTCCATaGTTCCCATCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLHVSTP*FPSAPL
Trigger: AAGGGGAGCAGATGGGAAGCATGGAGTGCTCACGTG...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLLQWWG*YGRREC
Trigger: GCATTCCCTTCTACCATAGCACCCCCACCACTGGAG...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTGGGCGGGGAACTCCTaGCTCCCTACGGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHWAGNS*LPTVIR
Trigger: TCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCA...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTCGGGTCTGCCTCTTaGTGGCGAGTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTLGSAS*WRVLVQ
Trigger: TTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTTGGCCAACAGGGGCTTaGAGGCGTTTCTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLAWPTGA*RRFSFD
Trigger: GTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCA...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCCATCTGCTCCCCTTTaGCCAACAGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHPSAPL*PTGAWR
Trigger: CCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACGCCAGGCTCCAGTGGTaGGGGTGCTATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHARLQW*GCYGRR
Trigger: CCTTCTACCATAGCACCCCCACCACTGGAGCCTGGC...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGCCAGGCTCCAGTGGTaGGGGTGCTATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLARLQW*GCYGRR
Trigger: CCTTCTACCATAGCACCCCCACCACTGGAGCCTGGC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACGAGGCCAACTGGTTCTaGCTCCAGAGCCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHEANWF*LQSPLG
Trigger: CCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTC...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCGACACCCCGTCAGGTaGTGGAGGAAGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTRHPVR*WRKKDN
Trigger: GTTGTCCTTCTTCCTCCACCACCTGACGGGGTGTCG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTCGGCGCCCTTCCTaGGGCGCTTCTGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPTRRPS*GASGAE
Trigger: TTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGT...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTTTCTCTGGCTCCTCCTaGTGTTTCTTCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLAFSGSS*CFFRPG
Trigger: TCCAGGCCTGAAGAAACATCAGGAGGAGCCAGAGAA...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCCATTGTGCCTTGGCTTaGGTACCTAACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGHCALA*VPNSEA
Trigger: AGCCTCTGAGTTAGGTACCCAAGCCAAGGCACAATG...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGTGTGAGGTCCATGGTTaGAAGGGGAGGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTCEVHG*KGREEH
Trigger: ATGTTCCTCCCTCCCCTTTCAACCATGGACCTCACA...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQPALSS*PAQVAS
Trigger: ACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGG...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCTTAGCTCTCCAGGCTaGAGCTCTACACTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHLSSPG*SSTLSP
Trigger: TGGGGAGAGTGTAGAGCTGCAGCCTGGAGAGCTAAG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGGGTGGCGAGTGCTTGTaGAACATCTCCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTGGECL*NISCSL
Trigger: GAGAGAACAGGAGATGTTGCACAAGCACTCGCCACC...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGTCCATGCTTCCCATCTaGTCCCCTTTGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLSMLPI*SPLANR
Trigger: CCTGTTGGCCAAAGGGGAGCAGATGGGAAGCATGGA...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTGGGGGCCAGGGAGCTTaGGCAGACTTTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPGGQGA*ADFPQS
Trigger: GCTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCC...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGC +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHLQWWG*YGRREC
Trigger: GCATTCCCTTCTACCATAGCACCCCCACCACTGGAG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCTTCAGGCCTGGATCTaGCTTTTTAGCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHLQAWI*LFSPVP
Trigger: GGGGACAGGGCTAAAAAGCCAGATCCAGGCCTGAAG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTGGGTCTGCCTCTTGGTaGCGAGTGCTTGTGCAACAT +
Preference number: 4 (lower is better)
Translates to: RQSPLLLTFAPAHFSVLTGSASW*RVLVQH
Trigger: ATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCC...AGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp ACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTCTCGGGTCTGCCTCTTaGTGGCGAGTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TISPTVNLRSCTLQCPHSLGSAS*WRVLVQ
Trigger: TTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAG...AGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCGCATGTGCGCCTGCATaGAGGCCAGGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LFIMVMRSTISPTVNLRSACAPA*RPGWDS
Trigger: GCTGTCCCAGCCTGGCCTCCATGCAGGCGCACATGC...GGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGTCTCTCAGGATTCCTTaGGGGTTTCTCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLSLRIP*GFLWLL
Trigger: GAGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGA...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGGGTGGCGAGTGCTTGTaGAACATCTCCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLGGECL*NISCSL
Trigger: GAGAGAACAGGAGATGTTGCACAAGCACTCGCCACC...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCCTCTTGGTGGCGAGTaGTTGTGCAACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLPLGGE*LCNISC
Trigger: ACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGG...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACCCTCTTGGTGGCGAGTaGTTGTGCAACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: STISPTVNLRSCTLQCPHPLGGE*LCNISC
Trigger: ACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGG...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTCTGCCATCTCGGGTCTaGCTCTTGGTGGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPLPSRV*LLVASA
Trigger: AGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAG...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp CCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTACCGTATGGTAGAAGGGAATaGCATATCTGGGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: PSRPAFRSLIGLLAKTLPYGRRE*HIWAAS
Trigger: TGATGCCGCCCAGATATGGCATTCCCTTCTACCATA...CGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTATGACCCGCACAGGTTaGAAGTGCGCCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPMTRTG*KCACVP
Trigger: GGGCACACAGGCGCACTTGCAACCTGTGCGGGTCAT...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CCA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTATGTTTCTTCAGGCCTaGATCTGGCTTTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGARSEAEPARFSFFNWTMFLQA*IWLFSP
Trigger: AGGGCTAAAAAGCCAGATCCAGGCCTGAAGAAACAT...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCAGGGTGCGGGCGAGGTaGGCAGCCTGCCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRRVRAR*AACLVL
Trigger: GAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCCT...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp ACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTTTCTCTGGCTCCTCCTaGTGTTTCTTCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TISPTVNLRSCTLQCPHSFSGSS*CFFRPG
Trigger: TCCAGGCCTGAAGAAACATCAGGAGGAGCCAGAGAA...AGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCCTGGTCTGTTCCTGCTaGGCCTCCTGCGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFIMVMRSTISPTVNLRSLVCSC*ASCVAP
Trigger: AGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAG...GGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGTCTCCATCTGATGCTTaGGTGAAAACCTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLSPSDA*VKTSFH
Trigger: GTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGA...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTTCTAGAAACCTGTTCTaGTTTCTGCTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLASRNLF*FLLLSR
Trigger: CCTGGAGAGAAGCAGAAACCAGAACAGGTTTCTAGA...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGTCTAGAAACCTGTTCTaGTTTCTGCTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGQKPSRPAFRSLIGLLSRNLF*FLLLSR
Trigger: CCTGGAGAGAAGCAGAAACCAGAACAGGTTTCTAGA...CAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTCTTAGCTCTCCAGGCTaGAGCTCTACACTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPLSSPG*SSTLSP
Trigger: TGGGGAGAGTGTAGAGCTGCAGCCTGGAGAGCTAAG...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGCATTGTGCCTTGGCTTaGGTACCTAACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQHCALA*VPNSEA
Trigger: AGCCTCTGAGTTAGGTACCCAAGCCAAGGCACAATG...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTAGGGAATGCCATATCTaGGCGGCATCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPRECHI*AASAGC
Trigger: GCATCCTGCTGATGCCGCCCAGATATGGCATTCCCT...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp AAGGGAGGGCACAGGAAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTAGGAAGTCCACAGTGTaGGGTCCATGGTTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KGGHRKLFIMVMRSTISPRKSTV*GPWLKG
Trigger: CCCTTTCAACCATGGACCTCACACTGTGGACTTCCT...AGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTTCCTGTGCCCTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCGGCTGGGCAGTCTTATaGGGGGCAGGGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRGWAVL*GAGTLC
Trigger: GCACAATGTCCCTGCCCCCCATAAGACTGCCCAGCC...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGATGTTTCTTCAGGCCTaGATCTGGCTTTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQMFLQA*IWLFSP
Trigger: AGGGCTAAAAAGCCAGATCCAGGCCTGAAGAAACAT...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCCACCCCGTCAGGTGGTaGAGGAAGAAGGACAACAGG +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRHPVRW*RKKDNR
Trigger: CCTGTTGTCCTTCTTCCTCCACCACCTGACGGGGTG...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCACCTGTTCTGGTTTCTaGTTCTCTCCAGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRTCSGF*FSPGSP
Trigger: GGGGGACCCTGGAGAGAAGCAGAAACCAGAACAGGT...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTTTCCCTCAACCACGTaGGCACTCCATGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRFPSTT*ALHASH
Trigger: ATGGGAAGCATGGAGTGCTCACGTGGTTGAGGGAAA...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR GCA 90 bp AAACTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCCCTCTTGGTGGCGAGTaGTTGTGCAACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLFIMVMRSTISPTVNLRPLGGE*LCNISC
Trigger: ACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGG...GCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR TCA 90 bp CTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTCTCCATCTGATGCTTaGGTGAAAACCTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LFIMVMRSTISPTVNLRSSPSDA*VKTSFH
Trigger: GTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGA...GGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGCCATCCGGGCGGGAGTaGGCTGGGCGAGTGACCGCG +
Preference number: 5 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPPSGRE*AGRVTA
Trigger: CGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGG...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCCATCCGGGCGGGAGTaGGCTGGGCGAGTGACCGCG +
Preference number: 5 (lower is better)
Translates to: LPGALLGRNLLGRRSSGAPSGRE*AGRVTA
Trigger: CGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 90 bp GCCGGGGGAGGGTGCGGGCGAGGTGGGCAGCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGTGCGCCTCTGTTCCCGCCAGACCTC +
Preference number: 5 (lower is better)
Translates to: AGGGCGRGGQPALSS*PAQVASAPLFPPDL
Trigger: GAGGTCTGGCGGGAACAGAGGCGCACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCCTCCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CAA 90 bp GAGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGGCTGAGCCTCCTGCGTaGCTCCTGCCATCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: EGTRRPSWGASGAEFARPAEPPA*LLPSRV
Trigger: GACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGC...CGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGAGGGGGCCAGGGAGCTaGCGCAGACTTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GSLAWASATRDRPGEGTRRGPGS*RRLSSE
Trigger: CTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCCT...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGCATGACCCGCACAGGTaGCAAGTGCGCCTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: GSLAWASATRDRPGEGTRHDPHR*QVRLCA
Trigger: GGCACACAGGCGCACTTGCAACCTGTGCGGGTCATG...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp GGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTCGGTCTCGGGTCTGCCTCTaGGTGGCGAGTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: GSLAWASATRDRPGEGTRSRVCL*VASACA
Trigger: TGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGA...CCGAGTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCTGAGCCTCCTGCGTaGCTCCTGCCATCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPAEPPA*LLPSRV
Trigger: GACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGC...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp AGGGCACTCGGCGCCCTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCCCATCTGCTCCCCTTaGGCCAACAGGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RALGALPGALLGRNLLGRPICSP*ANRGLE
Trigger: CTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGG...GCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAGGGCGCCGAGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACCTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGLAGLGFCDPRSSRRGHLLGRN*LGRRSS
Trigger: GCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAG...GTGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGAGGGGGCCAGGGAGCTaGCGCAGACTTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPRGPGS*RRLSSE
Trigger: CTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCCT...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCACTTCTGGGGCGGAATTaGCTAGGCCGCCGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: CRARWPGLLRPAIVQERALLGRN*LGRRSS
Trigger: GCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAG...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp GCCTGGATCTGGCTTTTTAGCCCTGTCCCCTCGAGCCCTCCAGCATaGCTCTTCCAGGGACTGCACTCCCAAGGCCCTGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: AWIWLFSPVPSSPPA*LFQGLHSQGPGRLL
Trigger: CAGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGAGGGGACAGGGCTAAAAAGCCAGATCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 90 bp GAGCCCTCCAGCATGCCTCTTCCAGGGACTGCACTCCCAAGGCCCTaGCCGCCTCCTGAAGGGGCCTTAGCTCTCCAGGCTGCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: EPSSMPLPGTALPRP*PPPEGALALQAAAL
Trigger: TAGAGCTGCAGCCTGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp TGTAGGGCTCGCTGGCCTGGGCTTCTGCGACCCGCGATCGTCCAGGAGAGGGCATCTCGGGTCTGCCTCTaGGTGGCGAGTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: CRARWPGLLRPAIVQERASRVCL*VASACA
Trigger: TGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGA...TGCCCTCTCCTGGACGATCGCGGGTCGCAGAAGCCCAGGCCAGCGAGCCCTACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 90 bp CATGCCTCTTCCAGGGACTGCACTCCCAAGGCCCTGGCCGCCTCCTaGAGGGGCCTTAGCTCTCCAGGCTGCAGCTCTACACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: HASSRDCTPKALAAS*RGLSSPGCSSTLSP
Trigger: TGGGGAGAGTGTAGAGCTGCAGCCTGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCCCATCCGGGCGGGAGTaGGCTGGGCGAGTGACCGCG +
Preference number: 5 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGPSGRE*AGRVTA
Trigger: CGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGG...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 90 bp CTGCTAGCACCAGGCTGTGGGCGGGGAACTCCTGGCTCCCTACGGTaGTCAGAGTATCACAGAGTGCTGGCCGGAGCCTGGCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: LLAPGCGRGTPGSLR*SEYHRVLAGAWLLA
Trigger: AGCTAGCAGCCAGGCTCCGGCCAGCACTCTGTGATACTCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCACAGCCTGGTGCTAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp CCTCCTGCCAGGCTCCAGTGGTGGGGGTGCTATGGTAGAAGGGAATaGCATATCTGGGCGGCATCAGCAGGATGCTCCACAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PPARLQWWGCYGRRE*HIWAASAGCSTGQA
Trigger: AGCCTGCCCTGTGGAGCATCCTGCTGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp GCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGCCATATCTGGGCGGCATCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASVPARPPARLQWWG*YGRRECHIWAASAG
Trigger: TCCTGCTGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS CCA 90 bp TGCAAGTGCGCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTaGTGGGGGTGCTATGGTAGAAGGGAATGCCATATCTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: CKCASVPARPPARLQ*WGCYGRRECHIWAA
Trigger: TGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGCGCACTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CAA 90 bp ACAGGGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGCTTGGTGGCGAGTGCTaGTGCAACATCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: TGSSGTERPRVSAGAWSWLGGEC*CNISCS
Trigger: AGAACAGGAGATGTTGCACAAGCACTCGCCACCAAG...CCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS GCA 90 bp TCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGCCATATCTGGGCGGCATCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSVPARPPARLQWWG*YGRRECHIWAASAG
Trigger: TCCTGCTGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CCA 90 bp GTGGGATCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTGGTaGGGGTGCTATGGTAGAAGGGAATGCCATATCTGGGCGGCATCA +
Preference number: 5 (lower is better)
Translates to: VGSSVPARPPARLQW*GCYGRRECHIWAAS
Trigger: TGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CCA 90 bp ACAGTGGGATCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTaGTGGGGGTGCTATGGTAGAAGGGAATGCCATATCTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: TVGSSVPARPPARLQ*WGCYGRRECHIWAA
Trigger: TGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGATCCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CCA 90 bp AAGTGCGCCTCTGTTCCCGCCAGACCTCCTGCCAGGCTCCAGTGGTaGGGGTGCTATGGTAGAAGGGAATGCCATATCTGGGCGGCATCA +
Preference number: 5 (lower is better)
Translates to: KCASVPARPPARLQW*GCYGRRECHIWAAS
Trigger: TGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGCGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS-3UTR CAA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGCATTTCAAGCCTCATTaGGAGGTGGGGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPHFKPH*EVGVKM
Trigger: CATCTTCACCCCCACCTCCAAATGAGGCTTGAAATG...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp GCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGGAGGCGTTTCTCCTTaGACCTGGTCTGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: ALLGRNLLGRRSSGARSEGGVSP*TWSVPA
Trigger: AGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCC...TTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 90 bp ACAGGGGCTTGGAGGCGTTTCTCCTTTGACCTGGTCTGTTCCTGCTaGGCCTCCTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: TGAWRRFSFDLVCSC*ASCVAPAISGLPLG
Trigger: ACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGAGCAGCGGTACGGAGCGGCCCCGTGTGTCCGCAGGTGCTTGGTCATGGCCGATCTTTAATTGGACTCTaGGCTAAGACGCTACCGACA +
Preference number: 5 (lower is better)
Translates to: GAAVRSGPVCPQVLGHGRSLIGL*AKTLPT
Trigger: TGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGA...TCGGCCATGACCAAGCACCTGCGGACACACGGGGCCGCTCCGTACCGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS TCA 90 bp ATCTGCTCCCCTTTGGCCAACAGGGGCTTGGAGGCGTTTCTCCTTTaGCCTGGTCTGTTCCTGCTGAGCCTCCTGCGTTGCTCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: ICSPLANRGLEAFLL*PGLFLLSLLRCSCH
Trigger: ATGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 90 bp CTGAGCCTCCTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTTGGTaGCGAGTGCTTGTGCAACATCTCCTGTTCTCTCCCACCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LSLLRCSCHLGSASW*RVLVQHLLFSPTSS
Trigger: AGAACTGGTGGGAGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGCATTCAGTGGTATGGTaGTTTCTTAGAGATGACGGC +
Preference number: 5 (lower is better)
Translates to: GRNLLGRRSSGARSEAEPHSVVW*FLRDDG
Trigger: GCCGTCATCTCTAAGAAACAACCATACCACTGAATG...CGGCTCGGCTTCTGACCTGGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp CTTCCTGGGGCGCTTCTGGGGCGGAATTTGCTAGGCCGCCGTAGCAGCGGTGCCCATTCAGTGGTATGGTaGTTTCTTAGAGATGACGGC +
Preference number: 5 (lower is better)
Translates to: LPGALLGRNLLGRRSSGAHSVVW*FLRDDG
Trigger: GCCGTCATCTCTAAGAAACAACCATACCACTGAATG...GGCACCGCTGCTACGGCGGCCTAGCAAATTCCGCCCCAGAAGCGCCCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGGCTGAGCCTCCTGCGTaGCTCCTGCCATCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTAEPPA*LLPSRV
Trigger: GACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGC...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTCATGACCCGCACAGGTaGCAAGTGCGCCTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLAHDPHR*QVRLCA
Trigger: GGCACACAGGCGCACTTGCAACCTGTGCGGGTCATG...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CCA 90 bp CCAGGCTGCAGCTCTACACTCTCCCCATACACAAAGTTCAGGAGCTaGGCAAAGGTAGAAGGGCTGATGCCTTCTCCCAGAGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: PGCSSTLSPYTKFRS*AKVEGLMPSPRAHW
Trigger: CCAGTGGGCTCTGGGAGAAGGCATCAGCCCTTCTACCTTTGCCCAGCTCCTGAACTTTGTGTATGGGGAGAGTGTAGAGCTGCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp TCCTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTTGGTGGCGAGTaGTTGTGCAACATCTCCTGTTCTCTCCCACCAGTTCTAGAAACC +
Preference number: 5 (lower is better)
Translates to: SCVAPAISGLPLGGE*LCNISCSLPPVLET
Trigger: GGTTTCTAGAACTGGTGGGAGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp AGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTGGAGGCGTTTCTCCTTaGACCTGGTCTGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SGARSEAEPARFSFFNWTGGVSP*TWSVPA
Trigger: AGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCC...AGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCCCATCTGCTCCCCTTaGGCCAACAGGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLPICSP*ANRGLE
Trigger: CTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGG...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCCTCTCTCAGGATTCCTaGAGGGTTTCTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ARSEAEPARFSFFNWTLGLSQDS*RVSLAP
Trigger: AGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGAG...GCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp TCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTCGGGTCTGCCTCTaGGTGGCGAGTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: STISPTVNLRSCTLQCPHSRVCL*VASACA
Trigger: TGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGA...GTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGCCCATCTGCTCCCCTTaGGCCAACAGGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQPICSP*ANRGLE
Trigger: CTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGG...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGAGGGGGCCAGGGAGCTaGCGCAGACTTTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQRGPGS*RRLSSE
Trigger: CTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCCT...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGTGGCTCCAGAGCCCTTaGGGGGCATTTAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTWLQSP*GAFRDS
Trigger: ACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCA...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp CGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTTGGCTCCAGAGCCCTTaGGGGGCATTTAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: RQSPLLLTFAPAHFSVLTWLQSP*GAFRDS
Trigger: ACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCA...AGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGCATGACCCGCACAGGTaGCAAGTGCGCCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQHDPHR*QVRLCS
Trigger: GGAACAGAGGCGCACTTGCAACCTGTGCGGGTCATG...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS GCA 90 bp ACTGCCACTTCTGCTTCTCCAAGCCCCTCTGCAGGGAAACACCTCTaGGCAAGCCAGGCTTTCTTCATTCCAGACAAGGATCACCACAAA +
Preference number: 5 (lower is better)
Translates to: TATSASPSPSAGKHL*ASQAFFIPDKDHHK
Trigger: TTTGTGGTGATCCTTGTCTGGAATGAAGAAAGCCTGGCTTGCGCAGAGGTGTTTCCCTGCAGAGGGGCTTGGAGAAGCAGAAGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS-3UTR CAA 90 bp CCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTCATTTCAAGCCTCATTaGGAGGTGGGGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PGQKPSRPAFRSLIGLLAHFKPH*EVGVKM
Trigger: CATCTTCACCCCCACCTCCAAATGAGGCTTGAAATG...AGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS-3UTR CAA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCAGGGACATTGTGCCTaGGCTTGGGTACCTAACTCA +
Preference number: 5 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTQGHCA*AWVPNS
Trigger: TGAGTTAGGTACCCAAGCCAAGGCACAATGTCCCTG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTCTCTCAGGATTCCTaGAGGGTTTCTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTLSQDS*RVSLAP
Trigger: AGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGAG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTGGACTCTTGGCTAAGACGCTTGGTGGCGAGTGCTaGTGCAACATCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QKPSRPAFRSLIGLLAKTLGGEC*CNISCS
Trigger: AGAACAGGAGATGTTGCACAAGCACTCGCCACCAAG...CGTCTTAGCCAAGAGTCCAATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp GAAGTCTGCCAGTTGGCAGTCTCTGACGTAAAAGATAGCAGATACTaGCACTTCTGCTTCTCCAAGCCCCTCTGCAGGGAAACACCTCTG +
Preference number: 5 (lower is better)
Translates to: EVCQLAVSDVKDSRY*HFCFSKPLCRETPL
Trigger: CAGAGGTGTTTCCCTGCAGAGGGGCTTGGAGAAGCAGAAGTGGCAGTATCTGCTATCTTTTACGTCAGAGACTGCCAACTGGCAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS-3UTR CAA 90 bp CAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTGCTCTCTCAGGATTCCTaGAGGGTTTCTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QSPLLLTFAPAHFSVLTLLSQDS*RVSLAP
Trigger: AGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGAG...CAGAGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp CGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGTGTCCTCACTCTTGGTGGCGAGTGCTaGTGCAACATCTCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RQSPLLLTFAPAHFSVLTLGGEC*CNISCS
Trigger: AGAACAGGAGATGTTGCACAAGCACTCGCCACCAAG...AGTGAGGACACTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTGCACACTTCAGGGAGGCGTTTCTCCTTaGACCTGGTCTGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: VMRSTISPTVNLRSCTLQGGVSP*TWSVPA
Trigger: AGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCC...CTGAAGTGTGCAGGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS-3UTR CAA 90 bp GTAGCAGCGGTGCCAGGTCAGAAGCCGAGCCGGCCCGCTTTTCGTTCTTTAATTTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACA +
Preference number: 5 (lower is better)
Translates to: VAAVPGQKPSRPAFRSLISLIGL*AKTLPT
Trigger: TGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGA...AATTAAAGAACGAAAAGCGGGCCGGCTCGGCTTCTGACCTGGCACCGCTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 90 bp GTAAAAGATAGCAGATACTGCCACTTCTGCTTCTCCAAGCCCCTCTaGAGGGAAACACCTCTGCGCAAGCCAGGCTTTCTTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: VKDSRYCHFCFSKPL*RETPLRKPGFLHSR
Trigger: TCTGGAATGAAGAAAGCCTGGCTTGCGCAGAGGTGTTTCCCTGCAGAGGGGCTTGGAGAAGCAGAAGTGGCAGTATCTGCTATCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS GCA 90 bp ACAGAAATATCTAGTAGTGGGTTTAAGACAGGCGTGCGGGAAGTCTaGCAGTTGGCAGTCTCTGACGTAAAAGATAGCAGATACTGCCAC +
Preference number: 5 (lower is better)
Translates to: TEISSSGFKTGVREV*QLAVSDVKDSRYCH
Trigger: GTGGCAGTATCTGCTATCTTTTACGTCAGAGACTGCCAACTGGCAGACTTCCCGCACGCCTGTCTTAAACCCACTACTAGATATTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS GCA 90 bp AGCAAGGACCTTGGAATAATCAGCCCTGCCTTTGAGTTTCATCTCTaGCATTTACTATTTGAGTCACCTTGGGCAAGTCACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SKDLGIISPAFEFHL*HLLFESPWASHFSG
Trigger: CCCAGAGAAGTGACTTGCCCAAGGTGACTCAAATAGTAAATGGCAGAGATGAAACTCAAAGGCAGGGCTGATTATTCCAAGGTCCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442282.1
CDS-3UTR CAA 90 bp CTCTTTATTATGGTGATGAGATCGACAATCTCCCCTACTGTTAACCTTCGCTCCTCTTTAATTGGACTCTaGGCTAAGACGCTACCGACA +
Preference number: 5 (lower is better)
Translates to: LFIMVMRSTISPTVNLRSSLIGL*AKTLPT
Trigger: TGTCGGTAGCGTCTTAGCCAAGAGTCCAATTAAAGA...GGAGCGAAGGTTAACAGTAGGGGAGATTGTCGATCTCATCACCATAATAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 72 bp GGGTGCGGGCGAGGTGGGCAGCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGTGCGCCTGTGTGCCCC +
Preference number: 6 (lower is better)
Translates to: GCGRGGQPALSS*PAQVASAPVCP
Trigger: GGGGCACACAGGCGCACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000426659.6
CDS TCA 72 bp GGGTGCGGGCGAGGTGGGCAGCCTGCCTTGTCCTCATaGCCCGCACAGGTTGCAAGTGCGCCTCTGTTCCCG +
Preference number: 6 (lower is better)
Translates to: GCGRGGQPALSS*PAQVASAPLFP
Trigger: CGGGAACAGAGGCGCACTTGCAACCTGTGCGGGTCATGAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481182.1
CDS TCA 72 bp CCAGGCTGTGGGCGGGGAACTCCTGGCTCCCTACGGTaGTCAGAGTATCACAGAGTGCTGGCCGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PGCGRGTPGSLR*SEYHRVLAGAW
Trigger: CCAGGCTCCGGCCAGCACTCTGTGATACTCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCACAGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 72 bp TCCAGGGACTGCACTCCCAAGGCCCTGGCCGCCTCCTaGAGGGGCCTTAGCTCTCCAGGCTGCAGCTCTACA +
Preference number: 6 (lower is better)
Translates to: SRDCTPKALAAS*RGLSSPGCSST
Trigger: TGTAGAGCTGCAGCCTGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp AGCATGCCTCTTCCAGGGACTGCACTCCCAAGGCCCTaGCCGCCTCCTGAAGGGGCCTTAGCTCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: SMPLPGTALPRP*PPPEGALALQA
Trigger: AGCCTGGAGAGCTAAGGCCCCTTCAGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp TGGCTTTTTAGCCCTGTCCCCTCGAGCCCTCCAGCATaGCTCTTCCAGGGACTGCACTCCCAAGGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: WLFSPVPSSPPA*LFQGLHSQGPG
Trigger: GCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGAGGGGACAGGGCTAAAAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp CCCGCCAGACCTCCTGCCAGGCTCCAGTGGTGGGGGTaGTATGGTAGAAGGGAATGCCATATCTGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PARPPARLQWWG*YGRRECHIWAA
Trigger: TGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp GGGAGGGAACCTGGGGTAGGGCTGGAGGAGGCCAACTaGTTCTGGCTCCAGAGCCCTTTGGGGGCATTTAGG +
Preference number: 6 (lower is better)
Translates to: GREPGVGLEEAN*FWLQSPLGAFR
Trigger: CCTAAATGCCCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCAGCCCTACCCCAGGTTCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CAA 90 bp GGGGTAGGGCTGGAGGAGGCCAACTGGTTCTGGCTCCAGAGCCCTTaGGGGGCATTTAGGGACAGTGGGATCCTCTGTTCCCGCCAGACC +
Preference number: 6 (lower is better)
Translates to: GVGLEEANWFWLQSP*GAFRDSGILCSRQT
Trigger: GGTCTGGCGGGAACAGAGGATCCCACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCAGCCCTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS GCA 72 bp CCTGGTCTGTTCCTGCTGAGCCTCCTGCGTTGCTCCTaGCATCTCGGGTCTGCCTCTTGGTGGCGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: PGLFLLSLLRCS*HLGSASWWRVL
Trigger: AAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 72 bp CCTTTGACCTGGTCTGTTCCTGCTGAGCCTCCTGCGTaGCTCCTGCCATCTCGGGTCTGCCTCTTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: PLTWSVPAEPPA*LLPSRVCLLVA
Trigger: CGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp GAACCTGGGGTAGGGCTGGAGGAGGCCAACTGGTTCTaGCTCCAGAGCCCTTTGGGGGCATTTAGGGACAGT +
Preference number: 6 (lower is better)
Translates to: EPGVGLEEANWF*LQSPLGAFRDS
Trigger: ACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCAGCCCTACCCCAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CAA 90 bp GGCGTTTCTCCTTTGACCTGGTCTGTTCCTGCTGAGCCTCCTGCGTaGCTCCTGCCATCTCGGGTCTGCCTCTTGGTGGCGAGTGCTTGT +
Preference number: 6 (lower is better)
Translates to: GVSPLTWSVPAEPPA*LLPSRVCLLVASAC
Trigger: ACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 90 bp CATCTGCTCCCCTTTGGCCAACAGGGGCTTGGAGGCGTTTCTCCTTaGACCTGGTCTGTTCCTGCTGAGCCTCCTGCGTTGCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: HLLPFGQQGLGGVSP*TWSVPAEPPALLLP
Trigger: TGGCAGGAGCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS TCA 72 bp CCTTTGGCCAACAGGGGCTTGGAGGCGTTTCTCCTTTaGCCTGGTCTGTTCCTGCTGAGCCTCCTGCGTTGC +
Preference number: 6 (lower is better)
Translates to: PLANRGLEAFLL*PGLFLLSLLRC
Trigger: GCAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp TGCCTGCAGGAGAGACCACCCCCTCTACCTCCAGAATaGACACATTCTGCCCCTAGCCTCCTGTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: CLQERPPPLPPE*THSAPSLLSPH
Trigger: GTGAGGAGACAGGAGGCTAGGGGCAGAATGTGTGCATTCTGGAGGTAGAGGGGGTGGTCTCTCCTGCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442282.1
CDS CCA 72 bp CTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTTGGTaGCGAGTGCTTGTGCAACATCTCCTGTTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LRCSCHLGSASW*RVLVQHLLFSP
Trigger: GGGAGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp TGGAGGAGGCCAACTGGTTCTGGCTCCAGAGCCCTTTaGGGGCATTTAGGGACAGTGGGATCCTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: WRRPTGSGSRAL*GHLGTVGSSVP
Trigger: GGGAACAGAGGATCCCACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS CAA 72 bp CCTCCTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTaGGTGGCGAGTGCTTGTGCAACATCTCCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: PPALLLPSRVCL*VASACATSPVL
Trigger: GAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 72 bp CCCTTTGGCCAACAGGGGCTTGGAGGCGTTTCTCCTTaGACCTGGTCTGTTCCTGCTGAGCCTCCTGCGTTG +
Preference number: 6 (lower is better)
Translates to: PFGQQGLGGVSP*TWSVPAEPPAL
Trigger: CAACGCAGGAGGCTCAGCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 72 bp CTGGAGGAGGCCAACTGGTTCTGGCTCCAGAGCCCTTaGGGGGCATTTAGGGACAGTGGGATCCTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LEEANWFWLQSP*GAFRDSGILCS
Trigger: GGAACAGAGGATCCCACTGTCCCTAAATGCCCCCAAAGGGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262630.7
ENST00000392197.7
CDS GCA 72 bp GCTCCTGCCATCTCGGGTCTGCCTCTTGGTGGCGAGTaGTTGTGCAACATCTCCTGTTCTCTCCCACCAGTT +
Preference number: 6 (lower is better)
Translates to: APAISGLPLGGE*LCNISCSLPPV
Trigger: AACTGGTGGGAGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp TTCCCTCAACCACGTGAGCACTCCATGCTTCCCATCTaGTCCCCTTTGGCCAACAGGGGCTTGGAGGCGTTT +
Preference number: 6 (lower is better)
Translates to: FPQPREHSMLPI*SPLANRGLEAF
Trigger: AAACGCCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGGAAGCATGGAGTGCTCACGTGGTTGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp AGGCTCCAGTGGTGGGGGTGCTATGGTAGAAGGGAATaGCATATCTGGGCGGCATCAGCAGGATGCTCCACA +
Preference number: 6 (lower is better)
Translates to: RLQWWGCYGRRE*HIWAASAGCST
Trigger: TGTGGAGCATCCTGCTGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACCCCCACCACTGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp CTCCTGCGTTGCTCCTGCCATCTCGGGTCTGCCTCTTaGTGGCGAGTGCTTGTGCAACATCTCCTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: LLRCSCHLGSAS*WRVLVQHLLFS
Trigger: AGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp TGCTTCCCATCTGCTCCCCTTTGGCCAACAGGGGCTTaGAGGCGTTTCTCCTTTGACCTGGTCTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: CFPSAPLWPTGA*RRFSFDLVCSC
Trigger: GCAGGAACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CCA 72 bp GCCAGGGAGCTTGCGCAGACTTTCCTCAGAGCCCCCTaGATTTTCCCTCAACCACGTGAGCACTCCATGCTT +
Preference number: 6 (lower is better)
Translates to: ARELAQTFLRAP*IFPQPREHSML
Trigger: AAGCATGGAGTGCTCACGTGGTTGAGGGAAAATCCAGGGGGCTCTGAGGAAAGTCTGCGCAAGCTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 72 bp CCTGCCATCTCGGGTCTGCCTCTTGGTGGCGAGTGCTaGTGCAACATCTCCTGTTCTCTCCCACCAGTTCTA +
Preference number: 6 (lower is better)
Translates to: PAISGLPLGGEC*CNISCSLPPVL
Trigger: TAGAACTGGTGGGAGAGAACAGGAGATGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS GCA 72 bp AGCAGATACTGCCACTTCTGCTTCTCCAAGCCCCTCTaGAGGGAAACACCTCTGCGCAAGCCAGGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: SRYCHFCFSKPL*RETPLRKPGFL
Trigger: AAGAAAGCCTGGCTTGCGCAGAGGTGTTTCCCTGCAGAGGGGCTTGGAGAAGCAGAAGTGGCAGTATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS GCA 72 bp TCTGCTTCTCCAAGCCCCTCTGCAGGGAAACACCTCTaGGCAAGCCAGGCTTTCTTCATTCCAGACAAGGAT +
Preference number: 6 (lower is better)
Translates to: SASPSPSAGKHL*ASQAFFIPDKD
Trigger: ATCCTTGTCTGGAATGAAGAAAGCCTGGCTTGCGCAGAGGTGTTTCCCTGCAGAGGGGCTTGGAGAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS CCA 72 bp AGCTCTACACTCTCCCCATACACAAAGTTCAGGAGCTaGGCAAAGGTAGAAGGGCTGATGCCTTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: SSTLSPYTKFRS*AKVEGLMPSPR
Trigger: TCTGGGAGAAGGCATCAGCCCTTCTACCTTTGCCCAGCTCCTGAACTTTGTGTATGGGGAGAGTGTAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262630.7
ENST00000392197.7
ENST00000481182.1
CDS CAA 72 bp AGTGGGTTTAAGACAGGCGTGCGGGAAGTCTGCCAGTaGGCAGTCTCTGACGTAAAAGATAGCAGATACTGC +
Preference number: 6 (lower is better)
Translates to: SGFKTGVREVCQ*AVSDVKDSRYC
Trigger: GCAGTATCTGCTATCTTTTACGTCAGAGACTGCCAACTGGCAGACTTCCCGCACGCCTGTCTTAAACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS GCA 72 bp TCTAGTAGTGGGTTTAAGACAGGCGTGCGGGAAGTCTaGCAGTTGGCAGTCTCTGACGTAAAAGATAGCAGA +
Preference number: 6 (lower is better)
Translates to: SSSGFKTGVREV*QLAVSDVKDSR
Trigger: TCTGCTATCTTTTACGTCAGAGACTGCCAACTGGCAGACTTCCCGCACGCCTGTCTTAAACCCACTACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1
CDS CAA 90 bp ATATCTAGTAGTGGGTTTAAGACAGGCGTGCGGGAAGTCTGCCAGTaGGCAGTCTCTGACGTAAAAGATAGCAGATACTGCCACTTCTGC +
Preference number: 6 (lower is better)
Translates to: ISSSGFKTGVREVCQ*AVSDVKDSRYCHFC
Trigger: GCAGAAGTGGCAGTATCTGCTATCTTTTACGTCAGAGACTGCCAACTGGCAGACTTCCCGCACGCCTGTCTTAAACCCACTACTAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451726.1