RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185670

Ensembl transcript IDs: ENST00000394807.5, ENST00000527994.1, ENST00000530112.2, ENST00000673933.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTaGCACCAACCTTCTGAGCTGCCATCTAAGGATGGTAAGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PGQSLYSCHPAGVIR*HQPSELPSKDGKSS
Trigger: GCTGCTCTTACCATCCTTAGATGGCAGCTCAGAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000530112.2
ENST00000673933.1
3UTR-3UTR TCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGGCAGGAGAATGGCGTaGATCGGGGAGGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRGRRMA*IGEAEL
Trigger: AAGCTCAGCCTCCCCGATTCACGCCATTCTCCTGCC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGCCGAGATCGCGCCACTaGACTCCAGTCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRPRSRH*TPVWVT
Trigger: TGTCACCCAGACTGGAGTGCAGTGGCGCGATCTCGG...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGCTGAGGCAGGAGAATaGCGTGAATCGGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRAEAGE*RESGRL
Trigger: CAGCCTCCCCGATTCACGCCATTCTCCTGCCTCAGC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCTGAGGCAGGAGAATaGCGTGAATCGGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAEAGE*RESGRL
Trigger: CAGCCTCCCCGATTCACGCCATTCTCCTGCCTCAGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGGCAGGAGAATGGCGTaGATCGGGGAGGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHGRRMA*IGEAEL
Trigger: AAGCTCAGCCTCCCCGATTCACGCCATTCTCCTGCC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACAGGCAGAGGTTGCAGTaGGCTGAAATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHRQRLQ*AEIAPL
Trigger: CAGTGGCGCAATTTCAGCTCACTGCAACCTCTGCCT...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCTGAAATTGCGCCACTaGACTCCAGCCTCAGTGACA +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHLKLRH*TPASVT
Trigger: TGTCACTGAGGCTGGAGTGCAGTGGCGCAATTTCAG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR GCA 90 bp AGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGCTTTTCAAGCAATTCTCCTaGCTCAGCCTGGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: SRKMLTIFCFPYVLVKELFKQFS*LSLGRA
Trigger: GGCTCTGCCCAGGCTGAGGCAGGAGAATTGCTTGAA...AAGCTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530112.2
3UTR-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACAATACAGGAATTAGCTaGGCGTGGTGGCGCGTTCCT +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHNTGIS*AWWRVP
Trigger: AGGAACGCGCCACCACGCCCAGCTAATTCCTGTATT...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGCACTCCAGCCTCAGTaGCAGAGCAAGACTCAAAAA +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHALQPQ*QSKTQK
Trigger: TTTTTGAGTCTTGCTCTGTCACTGAGGCTGGAGTGC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTGCCCCATAAAGTCCTaGTTATCTGGCTGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHCPIKS*LSGWAK
Trigger: CTTTGCCCAGCCAGATAAGCAGGACTTTATGGGGCA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTTTTTAAGGCCAAGGTaGGCAGATCACCTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHFLRPR*ADHLGS
Trigger: TGACCCCAGGTGATCTGCCCACCTTGGCCTTAAAAA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACACCAACCTTCTGAGCTaGCATCTAAGGATGGTAAGA +
Preference number: 2 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHTNLLS*HLRMVR
Trigger: TCTTACCATCCTTAGATGGCAGCTCAGAAGGTTGGT...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR CCA 90 bp TTCAGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGCTTTCTTTAGCCACATaGCTGCTCACCTTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: FSRKMLTIFCFPYVLVKELSLAT*LLTFPS
Trigger: GGAAGGAAAGGTGAGCAGCCATGTGGCTAAAGAAAG...CTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530112.2
3UTR-3UTR GCA 90 bp TTCAGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGACCAACCTTCTGAGCTaGCATCTAAGGATGGTAAGA +
Preference number: 2 (lower is better)
Translates to: FSRKMLTIFCFPYVLVKETNLLS*HLRMVR
Trigger: TCTTACCATCCTTAGATGGCAGCTCAGAAGGTTGGT...CTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530112.2
3UTR-3UTR CAA 90 bp CTCGCACTGTCACCCAGGGTTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAAGCAGAGCCTTTATTCTaGTCACCCAGCAGGGGTGAT +
Preference number: 3 (lower is better)
Translates to: LALSPRVGVQWRDLGSLQAEPLF*SPSRGD
Trigger: ATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC...TTGCAGTGAGCCGAGATCACGCCATTGCACTCCAACCCTGGGTGACAGTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530112.2
3UTR TCA 72 bp ACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTaGGAAGCGATTACACCTCAGGAAAATTCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: TFIASFMFQNIQ*EAITPQENSQC
Trigger: GCACTGGGAATTTTCCTGAGGTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR-3UTR CAA 90 bp TTCAGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGCTCAAAAATAGTCACTaGCTGGTAAGGGTTCACAGT +
Preference number: 3 (lower is better)
Translates to: FSRKMLTIFCFPYVLVKELKNSH*LVRVHS
Trigger: ACTGTGAACCCTTACCAGCAAGTGACTATTTTTGAG...CTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGCCAGGGCCCGGGCTTaGAGCCGCCGCTTACACACC +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVARARA*SRRLHT
Trigger: GGTGTGTAAGCGGCGGCTTCAAGCCCGGGCCCTGGC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCCAGGGCCCGGGCTTaGAGCCGCCGCTTACACACC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLARARA*SRRLHT
Trigger: GGTGTGTAAGCGGCGGCTTCAAGCCCGGGCCCTGGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGAGCCAGGGAGAGGCTaGACCCCTAGAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPEPGRG*TPRRGP
Trigger: GGGACCCCTTCTAGGGGTGCAGCCTCTCCCTGGCTC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAAACCCTGGGACCGCTaGTCCCGGAGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRKPWDR*SRRLCS
Trigger: GCTGCAGAGCCTCCGGGAGCAGCGGTCCCAGGGTTT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGGTACTGTCTGCCTCTaGCAGGGCCCGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPGTVCL*QGPGLK
Trigger: CTTCAAGCCCGGGCCCTGGCAGAGGCAGACAGTACC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGAGCCAGGGAGAGGCTaGACCCCTAGAAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPEPGRG*TPRRGP
Trigger: GGGACCCCTTCTAGGGGTGCAGCCTCTCCCTGGCTC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACAGCACTGCGGGAGGTaGAGATGGGCGGATCACGAG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPQHCGR*RWADHE
Trigger: CTCGTGATCCGCCCATCTCCACCTCCCGCAGTGCTG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGGGTGCAGGCAGAGGTaGGGTCACCAGTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPGCRQR*GHQSSM
Trigger: CATCGAGGACTGGTGACCTCACCTCTGCCTGCACCC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCGCGGTAGAGGTCCCCTaGCTGCGTGTAGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFAVEVP*LRVAPQ
Trigger: CTGCGGAGCTACACGCAGTCAGGGGACCTCTACCGC...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCGGTAGAGGTCCCCTaGCTGCGTGTAGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAVEVP*LRVAPQ
Trigger: CTGCGGAGCTACACGCAGTCAGGGGACCTCTACCGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGGCAGGAGAATGGCGTaGATCGGGGAGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPGRRMA*IGEAEL
Trigger: AAGCTCAGCCTCCCCGATTCACGCCATTCTCCTGCC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGAAACCCTGGGACCGCTaGTCCCGGAGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVKPWDR*SRRLCS
Trigger: GCTGCAGAGCCTCCGGGAGCAGCGGTCCCAGGGTTT...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATGCCCGCAGATGTGGTaGGTCAACCTCCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPCPQMW*VNLHAR
Trigger: CCTGGCATGGAGGTTGACGCACCACATCTGCGGGCA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGTGGCTGGGAGGGCTGTaGCCCATACACTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRWLGGL*PIHCSS
Trigger: GGAGGAGCAGTGTATGGGGCACAGCCCTCCCAGCCA...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGGTCGCTCACGTGTGTaGACCGTGGCATGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPGRSRV*TVACRR
Trigger: ACGGCGACATGCCACGGTGCACACACGTGAGCGACC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCTGCTCTGTCTGTCTaGTGTTGGGGAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPAALSV*CWGARE
Trigger: CTCCCTGGCTCCCCAACAGCAGACAGACAGAGCAGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGTGGCCCTCCACCACTaGTGCTCTGTCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPVALHH*CSVCLL
Trigger: CAGCAGACAGACAGAGCAGCAGTGGTGGAGGGCCAC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAAAAGGTCCCCACCAGTaGCTCCCCGGTAGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPKGPHQ*LPGSVQ
Trigger: TTGGACGCTACCGGGGAGCCACTGGTGGGGACCTTT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGCTGGGGCTGGAGCCTaGGATGGAACTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRAGAGA*DGTGAE
Trigger: CTCAGCTCCAGTTCCATCCCAGGCTCCAGCCCCAGC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGCAGCTCAGCTTCAGCTaGGGCTGGAGCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRQLSFS*GWSLGW
Trigger: CCATCCCAGGCTCCAGCCCCAGCTGAAGCTGAGCTG...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGTCTTCAAAAGCCTCTaGCTGGGAGGGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPVFKSL*LGGLCP
Trigger: GGGGCACAGCCCTCCCAGCCAGAGGCTTTTGAAGAC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACAGGAAGTGGTCACTTaGCCCCACCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPQEVVT*PHLLQS
Trigger: GGACTGGAGGAGGTGGGGCCAAGTGACCACTTCCTG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTCTGCAGCAGCTGCTaGCTGTGTTCTGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLCSSC*LCSGNS
Trigger: GGAGTTCCCAGAACACAGTCAGCAGCTGCTGCAGAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGTCACCAGTCCTCGATaGTACTGCCCTGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPVTSPR*YCPAPG
Trigger: GCCAGGTGCAGGGCAGTATCATCGAGGACTGGTGAC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGGGTGCAGGCAGAGGTaGGGTCACCAGTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLGCRQR*GHQSSM
Trigger: CATCGAGGACTGGTGACCTCACCTCTGCCTGCACCC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCGCCAGGTCCTCATTGTaGGCCTTGCGGATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFARSSL*ALRMWR
Trigger: CCGCCACATCCGCAAGGCTCACAATGAGGACCTGGC...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGCCAGGTCCTCATTGTaGGCCTTGCGGATGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVARSSL*ALRMWR
Trigger: CCGCCACATCCGCAAGGCTCACAATGAGGACCTGGC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCAGGCTGAGCTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFRLSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCTCAGCCT...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAAGGCTGAGCTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLRLSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCTCAGCCT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTATTCGCTCCCAGGCCTTaGCAGGCGATGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLFAPRP*QAMPLR
Trigger: GCGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAA...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCTTCGCTCCCAGGCCTTaGCAGGCGATGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFFAPRP*QAMPLR
Trigger: GCGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAA...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCGGTACTGTCTGCCTCTaGCAGGGCCCGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFGTVCL*QGPGLK
Trigger: CTTCAAGCCCGGGCCCTGGCAGAGGCAGACAGTACC...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTCACTGGTGGATGAGGTaGCCGCAGATGTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPHWWMR*PQMWCV
Trigger: GACGCACCACATCTGCGGGCACCTCATCCACCAGTG...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTATGGCTGGGAGGGCTGTaGCCCATACACTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLWLGGL*PIHCSS
Trigger: GGAGGAGCAGTGTATGGGGCACAGCCCTCCCAGCCA...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGGTCGCTCACGTGTGTaGACCGTGGCATGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVGRSRV*TVACRR
Trigger: ACGGCGACATGCCACGGTGCACACACGTGAGCGACC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCCCTCCACCACTGCTaGTCTGTCTGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPALHHC*SVCLLL
Trigger: CAACAGCAGACAGACAGAGCAGCAGTGGTGGAGGGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCAAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVPRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTTGG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTAAAGGTCCCCACCAGTaGCTCCCCGGTAGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPKGPHQ*LPGSVQ
Trigger: TTGGACGCTACCGGGGAGCCACTGGTGGGGACCTTT...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCCAGCACAGCCCGATaGGCCAAGAACTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPASTAR*AKNWVL
Trigger: TAGTACCCAGTTCTTGGCCCATCGGGCTGTGCTGGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTAGGTGCCCGCAGATGTaGTGCGTCAACCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPRCPQM*CVNLHA
Trigger: GGCATGGAGGTTGACGCACCACATCTGCGGGCACCT...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCGCTGGGGCTGGAGCCTaGGATGGAACTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFAGAGA*DGTGAE
Trigger: CTCAGCTCCAGTTCCATCCCAGGCTCCAGCCCCAGC...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAGCTTCAGCTGGGGCTaGAGCCTGGGATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRSFSWG*SLGWNW
Trigger: CCAGTTCCATCCCAGGCTCCAGCCCCAGCTGAAGCT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCAGCTCAGCTTCAGCTaGGGCTGGAGCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVQLSFS*GWSLGW
Trigger: CCATCCCAGGCTCCAGCCCCAGCTGAAGCTGAGCTG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACACGTGTGTGCACCGTaGCATGTCGCCGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPHVCAP*HVAVVC
Trigger: ACACACTACGGCGACATGCCACGGTGCACACACGTG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACTAGCGGAGAAAGCTaGTACCTCACCCACCACCGA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPTSGES*YLTHHR
Trigger: TCGGTGGTGGGTGAGGTATCAGCTTTCTCCGCTAGT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATTTGCCCCAGTGGCCTaGTGTCTCAGCAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPFAPVA*CLSRCQ
Trigger: TTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAGGACGGACAGTAGGTaGGGGAGCAGCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRRTDSR*GSSRAF
Trigger: AAAGGCTCTGCTGCTCCCTCACCTACTGTCCGTCCT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTCAGCCACTGGTGGATaGGGTGCCCGCAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVSATGG*GARRCG
Trigger: ACCACATCTGCGGGCACCTCATCCACCAGTGGCTGA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCCCTTGGAGAGAGCTaGCATAGGCTTTGCCCCATA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPALGES*HRLCPI
Trigger: TATGGGGCAAAGCCTATGTCAGCTCTCTCCAAGGGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTGTGCCCCATACACTaGTCCTCCAGATGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLCPIH*SSRWES
Trigger: GCTTTCCCATCTGGAGGAGCAGTGTATGGGGCACAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTCTCCTCCAGTCCTGCTaGCCCTGGGTCTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPLLQSC*PWVFKS
Trigger: GCTTTTGAAGACCCAGGGGCAGCAGGACTGGAGGAG...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCTGCTCTGTCTGTCTaGTGTTGGGGAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAALSV*CWGARE
Trigger: CTCCCTGGCTCCCCAACAGCAGACAGACAGAGCAGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGCCCTCCACCACTGCTaGTCTGTCTGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRALHHC*SVCLLL
Trigger: CAACAGCAGACAGACAGAGCAGCAGTGGTGGAGGGC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGTGGCCCTCCACCACTaGTGCTCTGTCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVVALHH*CSVCLL
Trigger: CAGCAGACAGACAGAGCAGCAGTGGTGGAGGGCCAC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCGAGATCGCGCCACTaGACTCCAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVPRSRH*TPVWVT
Trigger: TGTCACCCAGACTGGAGTGCAGTGGCGCGATCTCGG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCTCACAAAGGAAACCCTaGGACCGCTGCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFSQRKP*DRCSRR
Trigger: CCTCCGGGAGCAGCGGTCCCAGGGTTTCCTTTGTGA...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACGATGGGCCAAGAACTaGGTACTACCCACCATCACG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPRWAKN*VLPTIT
Trigger: CGTGATGGTGGGTAGTACCCAGTTCTTGGCCCATCG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGAGGTGCCCGCAGATGTaGTGCGTCAACCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVRCPQM*CVNLHA
Trigger: GGCATGGAGGTTGACGCACCACATCTGCGGGCACCT...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAGAGACATCAGCCACTaGTGGATGAGGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRRDISH*WMRCPQ
Trigger: CTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAAGCTTCAGCTGGGGCTaGAGCCTGGGATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLSFSWG*SLGWNW
Trigger: CCAGTTCCATCCCAGGCTCCAGCCCCAGCTGAAGCT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTGCGGGAGGTGGAGATaGGCGGATCACGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVCGRWR*ADHEVR
Trigger: TCTGACCTCGTGATCCGCCCATCTCCACCTCCCGCA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGGAATTAGCTGGGCGTaGTGGCGCGTTCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPGISWA*WRVPVI
Trigger: GATTACAGGAACGCGCCACCACGCCCAGCTAATTCC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGACTAGCGGAGAAAGCTaGTACCTCACCCACCACCGA +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRTSGES*YLTHHR
Trigger: TCGGTGGTGGGTGAGGTATCAGCTTTCTCCGCTAGT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACTCTGCAGCAGCTGCTaGCTGTGTTCTGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLLCSSC*LCSGNS
Trigger: GGAGTTCCCAGAACACAGTCAGCAGCTGCTGCAGAG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAAGGACGGACAGTAGGTaGGGGAGCAGCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLRTDSR*GSSRAF
Trigger: AAAGGCTCTGCTGCTCCCTCACCTACTGTCCGTCCT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGCTCTCTCAGGACCCTaGGGCTGTTCATCTGACACA +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPALSGP*GCSSDT
Trigger: TGTGTCAGATGAACAGCCTCAGGGTCCTGAGAGAGC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAGGCAGAGGTTGCAGTaGGCTGAAATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRRQRLQ*AEIAPL
Trigger: CAGTGGCGCAATTTCAGCTCACTGCAACCTCTGCCT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTTTCCATTCCCCTTTaGCCCAGTGGCCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLSIPL*PSGLMS
Trigger: AGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCTCCTCCAGTCCTGCTaGCCCTGGGTCTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVLLQSC*PWVFKS
Trigger: GCTTTTGAAGACCCAGGGGCAGCAGGACTGGAGGAG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACACCTCCTCCAGTCCTaGTGCCCCTGGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLHLLQS*CPWVFK
Trigger: TTTGAAGACCCAGGGGCAGCAGGACTGGAGGAGGTG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGCAGGGGTGATAAGGTaGCACCAACCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRAGVIR*HQPSEL
Trigger: CAGCTCAGAAGGTTGGTGGCACCTTATCACCCCTGC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTGAAATTGCGCCACTaGACTCCAGCCTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLKLRH*TPASVT
Trigger: TGTCACTGAGGCTGGAGTGCAGTGGCGCAATTTCAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCGCCAGCACAGCCCGATaGGCCAAGAACTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFASTAR*AKNWVL
Trigger: TAGTACCCAGTTCTTGGCCCATCGGGCTGTGCTGGC...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATCATGTGCAAGTAGCTaGCAGCTGCCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPSCASS*QLPAHP
Trigger: AGGATGTGCTGGCAGCTGCCAGCTACTTGCACATGA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCCCTTTGCCCCAGTaGCCTGATGTCTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPSPLPQ*PDVSAD
Trigger: ATCTGCTGAGACATCAGGCCACTGGGGCAAAGGGGA...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGCCCACTAGACATTGGTaGCTCATCTGGAGGACGGAC +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRPTRHW*LIWRTD
Trigger: GTCCGTCCTCCAGATGAGCCACCAATGTCTAGTGGG...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCAGAGACATCAGCCACTaGTGGATGAGGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFRDISH*WMRCPQ
Trigger: CTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCT...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTCAAAAGCCTCTGGCTaGGAGGGCTGTGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVSKASG*EGCAPY
Trigger: GTATGGGGCACAGCCCTCCCAGCCAGAGGCTTTTGA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCACGTGTGTGCACCGTaGCATGTCGCCGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVHVCAP*HVAVVC
Trigger: ACACACTACGGCGACATGCCACGGTGCACACACGTG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTGGTTTGCTGCGTTTaGCCAGGTCCTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLVCCV*PGPHCE
Trigger: CTCACAATGAGGACCTGGCCAAACGCAGCAAACCAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATCCCACTTCTGGATCTaGTTTGCTGCGTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPSHFWI*FAAFGQ
Trigger: CTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAAATACAGGAATTAGCTaGGCGTGGTGGCGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPNTGIS*AWWRVP
Trigger: AGGAACGCGCCACCACGCCCAGCTAATTCCTGTATT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
3UTR CAA 72 bp AATTCTCCTGCCTCAGCCTGGGCAGAGCCTTTATTCTaGTCACCCAGCAGGGGTGATAAGGTGCCACCAACC +
Preference number: 4 (lower is better)
Translates to: NSPASAWAEPLF*SPSRGDKVPPT
Trigger: GGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAGGCAGGAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGCTCTCTCAGGACCCTaGGGCTGTTCATCTGACACA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVALSGP*GCSSDT
Trigger: TGTGTCAGATGAACAGCCTCAGGGTCCTGAGAGAGC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGAGGCAGAGGTTGCAGTaGGCTGAAATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVRQRLQ*AEIAPL
Trigger: CAGTGGCGCAATTTCAGCTCACTGCAACCTCTGCCT...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCTGGGGTCAGGAATTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVLGSGI*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAATTCCTGACCCCAG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCCCTTGGAGAGAGCTaGCATAGGCTTTGCCCCATA +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLALGES*HRLCPI
Trigger: TATGGGGCAAAGCCTATGTCAGCTCTCTCCAAGGGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCTCATTGTGAGCCTTaGGGATGTGGCGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVPHCEP*GCGGRG
Trigger: ACCTCTACCGCCACATCCGCAAGGCTCACAATGAGG...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACCTCATTGTGAGCCTTaGGGATGTGGCGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLPHCEP*GCGGRG
Trigger: ACCTCTACCGCCACATCCGCAAGGCTCACAATGAGG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCAGGGGTGATAAGGTaGCACCAACCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAGVIR*HQPSEL
Trigger: CAGCTCAGAAGGTTGGTGGCACCTTATCACCCCTGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTCTGAAATTGCGCCACTaGACTCCAGCCTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPLKLRH*TPASVT
Trigger: TGTCACTGAGGCTGGAGTGCAGTGGCGCAATTTCAG...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGATGCCAACGAAGGTTaGGTGCCACGGGAAGTACTA +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRDANEG*VPREVL
Trigger: TAGTACTTCCCGTGGCACCCAACCTTCGTTGGCATC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCCCACTAGACATTGGTaGCTCATCTGGAGGACGGAC +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFPTRHW*LIWRTD
Trigger: GTCCGTCCTCCAGATGAGCCACCAATGTCTAGTGGG...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGAGCCCCACTAGACATTaGTGGCTCATCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVSPTRH*WLIWRT
Trigger: CGTCCTCCAGATGAGCCACCAATGTCTAGTGGGGCT...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCAGCCCCACTAGACATTaGTGGCTCATCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFSPTRH*WLIWRT
Trigger: CGTCCTCCAGATGAGCCACCAATGTCTAGTGGGGCT...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGTCCTCCAGGATCCTTTaGTTCCACCACCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRSSRIL*FHHPQT
Trigger: AGTCTGAGGGTGGTGGAACCAAAGGATCCTGGAGGA...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCTTCAACTTTCACCTaGACCAGCTCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPASTFT*TSSASA
Trigger: AGCTGAAGCTGAGCTGGTCCAGGTGAAAGTTGAAGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACACTGCTCCTCCAGATaGGAAAGCTCTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLHCSSR*ESSLRT
Trigger: GGTCCTGAGAGAGCTTTCCCATCTGGAGGAGCAGTG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCACTGCTCCTCCAGATaGGAAAGCTCTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFHCSSR*ESSLRT
Trigger: GGTCCTGAGAGAGCTTTCCCATCTGGAGGAGCAGTG...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAAAGGGGTCCCACTTCTaGATCTGGTTTGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPKGSHF*IWFAAF
Trigger: AAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGGAATTAGCTGGGCGTaGTGGCGCGTTCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLGISWA*WRVPVI
Trigger: GATTACAGGAACGCGCCACCACGCCCAGCTAATTCC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGGTGGGCAGATCACCTaGGGTCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLGGQIT*GQEFET
Trigger: GGTCTCAAATTCCTGACCCCAGGTGATCTGCCCACC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATTTTTAAGGCCAAGGTaGGCAGATCACCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPFLRPR*ADHLGS
Trigger: TGACCCCAGGTGATCTGCCCACCTTGGCCTTAAAAA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACAAACTAGGAAGCTGTaGGTTGGTTTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPQTRKL*VGFLLL
Trigger: AAGGAGGAGGAAACCAACTCACAGCTTCCTAGTTTG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGCACTCCAGCCTCAGTaGCAGAGCAAGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPALQPQ*QSKTQK
Trigger: TTTTTGAGTCTTGCTCTGTCACTGAGGCTGGAGTGC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCTTTCCATTCCCCTTTaGCCCAGTGGCCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFLSIPL*PSGLMS
Trigger: AGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAG...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp TTCAAGCAATTCTCCTGCCTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGGCAGGGGTGATAAGGTaGCACCAACCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FKQFSCLSLGRAFILVTQAGVIR*HQPSEL
Trigger: CAGCTCAGAAGGTTGGTGGCACCTTATCACCCCTGC...CTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAGGCAGGAGAATTGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTGCCCCATAAAGTCCTaGTTATCTGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPCPIKS*LSGWAK
Trigger: CTTTGCCCAGCCAGATAAGCAGGACTTTATGGGGCA...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAAAGCAGCCCAAAGGCTaGGGCTGTGACAATTTCATT +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPKQPKG*GCDNFI
Trigger: AATGAAATTGTCACAGCCCCAGCCTTTGGGCTGCTT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACCTCTCAGGGTCAGCTaGCCAGCATACATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLPLRVS*PAYIKS
Trigger: GGACTTTATGTATGCTGGCCAGCTGACCCTGAGAGG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCCTCTCAGGGTCAGCTaGCCAGCATACATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFPLRVS*PAYIKS
Trigger: GGACTTTATGTATGCTGGCCAGCTGACCCTGAGAGG...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTATCATGTGCAAGTAGCTaGCAGCTGCCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLSCASS*QLPAHP
Trigger: AGGATGTGCTGGCAGCTGCCAGCTACTTGCACATGA...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGCTTCAACTTTCACCTaGACCAGCTCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRASTFT*TSSASA
Trigger: AGCTGAAGCTGAGCTGGTCCAGGTGAAAGTTGAAGC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCAGAAGACAGGTAAAGTaGCTCATGCAGGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFRRQVK*LMQGCG
Trigger: CCCGCATCCCTGCATGAGCCACTTTACCTGTCTTCT...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAACCCCAAAGCTTCCTaGAGCTGCTTCGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRNPKAS*SCFVLR
Trigger: TCTGAGTACGAAGCAGCTCCAGGAAGCTTTGGGGTT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACTGGTTTGCTGCGTTTaGCCAGGTCCTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLLVCCV*PGPHCE
Trigger: CTCACAATGAGGACCTGGCCAAACGCAGCAAACCAG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTCCCACTTCTGGATCTaGTTTGCTGCGTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVSHFWI*FAAFGQ
Trigger: CTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGTTTTTAAGGCCAAGGTaGGCAGATCACCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRFLRPR*ADHLGS
Trigger: TGACCCCAGGTGATCTGCCCACCTTGGCCTTAAAAA...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCACTTTCTTTAGCCACATaGCTGCTCACCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPLSLAT*LLTFPS
Trigger: GGAAGGAAAGGTGAGCAGCCATGTGGCTAAAGAAAG...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCCGCTTACACACCTTaGCGATGTCATTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAAYTP*RCHSCA
Trigger: TGCACATGAATGACATCGTCAAGGTGTGTAAGCGGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGCCGCTTACACACCTTaGCGATGTCATTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVAAYTP*RCHSCA
Trigger: TGCACATGAATGACATCGTCAAGGTGTGTAAGCGGC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGGCACTCCAGCCTCAGTaGCAGAGCAAGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVALQPQ*QSKTQK
Trigger: TTTTTGAGTCTTGCTCTGTCACTGAGGCTGGAGTGC...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAAAGCTTCCTGGAGCTaGTTCGTACTCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRKASWS*FVLRRQ
Trigger: CTGTCTTCTGAGTACGAAGCAGCTCCAGGAAGCTTT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTAAAGCTTCCTGGAGCTaGTTCGTACTCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPKASWS*FVLRRQ
Trigger: CTGTCTTCTGAGTACGAAGCAGCTCCAGGAAGCTTT...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCTCTTCCCACATGTCTTaGAGGTGGGAACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFSSHMS*RWEHPQ
Trigger: CTGAGGATGTTCCCACCTGCAAGACATGTGGGAAGA...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTGCCCCATAAAGTCCTaGTTATCTGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVCPIKS*LSGWAK
Trigger: CTTTGCCCAGCCAGATAAGCAGGACTTTATGGGGCA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACAGGAAAATTCCCAGTaGCCTTGGAGAGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLQENSQ*PWRELT
Trigger: TGTCAGCTCTCTCCAAGGGCACTGGGAATTTTCCTG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCCAGGAAAATTCCCAGTaGCCTTGGAGAGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFQENSQ*PWRELT
Trigger: TGTCAGCTCTCTCCAAGGGCACTGGGAATTTTCCTG...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCTTTCCTCCTCCTTCTTaGTACTGTCTGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFFPPPS*YCLPLP
Trigger: TGGCAGAGGCAGACAGTACCAAGAAGGAGGAGGAAA...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTATTTCCTCCTCCTTCTTaGTACTGTCTGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLFPPPS*YCLPLP
Trigger: TGGCAGAGGCAGACAGTACCAAGAAGGAGGAGGAAA...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGAACCCCAAAGCTTCCTaGAGCTGCTTCGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVNPKAS*SCFVLR
Trigger: TCTGAGTACGAAGCAGCTCCAGGAAGCTTTGGGGTT...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCAAGGGGTCCCACTTCTaGATCTGGTTTGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFKGSHF*IWFAAF
Trigger: AAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTT...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGTACAAAATCTTTAGGTaGCCCTCCACCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRYKIFR*PSTTAA
Trigger: AGCAGCAGTGGTGGAGGGCCACCTAAAGATTTTGTA...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGCAAAGGCTGGGGCTGTaGCAATTTCATTGTGAATAC +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRQRLGL*QFHCEY
Trigger: GTATTCACAATGAAATTGTCACAGCCCCAGCCTTTG...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACAAACTAGGAAGCTGTaGGTTGGTTTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLQTRKL*VGFLLL
Trigger: AAGGAGGAGGAAACCAACTCACAGCTTCCTAGTTTG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTACTGAGGCTGTTCATCTaGCACATCAGTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLLRLFI*HISLFI
Trigger: GATGAAGAGACTGATGTGTCAGATGAACAGCCTCAG...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTTCCAGAACATACAGTaGGAAGCGATTACACCTCAG +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPFQNIQ*EAITPQ
Trigger: CTGAGGTGTAATCGCTTCTCACTGTATGTTCTGGAA...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTACCAACCTTCTGAGCTaGCATCTAAGGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPTNLLS*HLRMVR
Trigger: TCTTACCATCCTTAGATGGCAGCTCAGAAGGTTGGT...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000530112.2
ENST00000673933.1
CDS-3UTR GCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGACCAACCTTCTGAGCTaGCATCTAAGGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRTNLLS*HLRMVR
Trigger: TCTTACCATCCTTAGATGGCAGCTCAGAAGGTTGGT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAAAGCAGCCCAAAGGCTaGGGCTGTGACAATTTCATT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLKQPKG*GCDNFI
Trigger: AATGAAATTGTCACAGCCCCAGCCTTTGGGCTGCTT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTACAAAATCTTTAGGTaGCCCTCCACCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVYKIFR*PSTTAA
Trigger: AGCAGCAGTGGTGGAGGGCCACCTAAAGATTTTGTA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTCCTGCTTATCTGGCTaGGCAAAGAAAAGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVSCLSG*AKKRVG
Trigger: TCCTACCCTTTTCTTTGCCCAGCCAGATAAGCAGGA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGAAAGTCCTGCTTATCTaGCTGGGCAAAGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRKVLLI*LGKEKG
Trigger: ACCCTTTTCTTTGCCCAGCCAGATAAGCAGGACTTT...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTATTCCAGAACATACAGTaGGAAGCGATTACACCTCAG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLFQNIQ*EAITPQ
Trigger: CTGAGGTGTAATCGCTTCTCACTGTATGTTCTGGAA...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAATGAAACTGCTGAGATaGCAGAAGAGAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPMKLLR*QKRSSL
Trigger: CAAACTACTTCTCTTCTGGCATCTCAGCAGTTTCAT...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAAAAGTCCTGCTTATCTaGCTGGGCAAAGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLKVLLI*LGKEKG
Trigger: ACCCTTTTCTTTGCCCAGCCAGATAAGCAGGACTTT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGGCCTTGCCAGGCGATaGCTCTACGCCCCACTTCGA +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHGLARR*LYAPLR
Trigger: TCGAAGTGGGGCGTAGAGGCATCGCCTGGCAAGGCC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCTTCTTGGTACTGTCTaGCTCTGCCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHLLGTV*LCQGPG
Trigger: GCCCGGGCCCTGGCAGAGGCAGACAGTACCAAGAAG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCAGCACTGCGGGAGGTaGAGATGGGCGGATCACGAG +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHQHCGR*RWADHE
Trigger: CTCGTGATCCGCCCATCTCCACCTCCCGCAGTGCTG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTCAGCCACTGGTGGATaGGGTGCCCGCAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHSATGG*GARRCG
Trigger: ACCACATCTGCGGGCACCTCATCCACCAGTGGCTGA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAATGAAACTGCTGAGATaGCAGAAGAGAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLMKLLR*QKRSSL
Trigger: CAAACTACTTCTCTTCTGGCATCTCAGCAGTTTCAT...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp GAGCTTTCTTTAGCCACATGGCTGCTCACCTTTCCTTCCTGTAACTCAAAAATATTCAAGCAATTCTCCTaGCTCAGCCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ELSLATWLLTFPSCNSKIFKQFS*LSLGRA
Trigger: GGCTCTGCCCAGGCTGAGGCAGGAGAATTGCTTGAA...TATTTTTGAGTTACAGGAAGGAAAGGTGAGCAGCCATGTGGCTAAAGAAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTCACAAAGGAAACCCTaGGACCGCTGCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHSQRKP*DRCSRR
Trigger: CCTCCGGGAGCAGCGGTCCCAGGGTTTCCTTTGTGA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGTCTTCAAAAGCCTCTaGCTGGGAGGGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHVFKSL*LGGLCP
Trigger: GGGGCACAGCCCTCCCAGCCAGAGGCTTTTGAAGAC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCAGGAAGTGGTCACTTaGCCCCACCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHQEVVT*PHLLQS
Trigger: GGACTGGAGGAGGTGGGGCCAAGTGACCACTTCCTG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTGCGGGAGGTGGAGATaGGCGGATCACGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHCGRWR*ADHEVR
Trigger: TCTGACCTCGTGATCCGCCCATCTCCACCTCCCGCA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTTTGCCCCAGTGGCCTaGTGTCTCAGCAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHFAPVA*CLSRCQ
Trigger: TTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCTGTGCCCCATACACTaGTCCTCCAGATGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHLCPIH*SSRWES
Trigger: GCTTTCCCATCTGGAGGAGCAGTGTATGGGGCACAG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGGTGGGCAGATCACCTaGGGTCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHGGQIT*GQEFET
Trigger: GGTCTCAAATTCCTGACCCCAGGTGATCTGCCCACC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGATGCCAACGAAGGTTaGGTGCCACGGGAAGTACTA +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHDANEG*VPREVL
Trigger: TAGTACTTCCCGTGGCACCCAACCTTCGTTGGCATC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTCCTCCAGGATCCTTTaGTTCCACCACCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHSSRIL*FHHPQT
Trigger: AGTCTGAGGGTGGTGGAACCAAAGGATCCTGGAGGA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACCTGAGGCTGTTCATCTaGCACATCAGTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHLRLFI*HISLFI
Trigger: GATGAAGAGACTGATGTGTCAGATGAACAGCCTCAG...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR TCA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGTGACAATTTCATTGTaGATACACACCAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHVTISL*IHTRSL
Trigger: GAGGGATCTGGTGTGTATTCACAATGAAATTGTCAC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR GCA 90 bp TTCAGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGATGTTAACCATCTTTTaGTTCCCATATGTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: FSRKMLTIFCFPYVLVKEMLTIF*FPYVLV
Trigger: AACTAGGACATATGGGAAGCAAAAGATGGTTAACAT...CTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS TCA 90 bp TTCCAGGGGCTAAGGACTACCAGGGTGGGAACTAGCGGAGAAAGCTaGTACCTCACCCACCACCGAGCAGCCACAGGGCGAGCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: FQGLRTTRVGTSGES*YLTHHRAATGRAPP
Trigger: GGGCGGAGCTCGCCCTGTGGCTGCTCGGTGGTGGGTGAGGTATCAGCTTTCTCCGCTAGTTCCCACCCTGGTAGTCCTTAGCCCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673933.1
CDS GCA 90 bp GCACAGCCCGATGGGCCAAGAACTGGGTACTACCCACCATCACGGTaGAGTCACAAAGGAAACCCTGGGACCGCTGCTCCCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AQPDGPRTGYYPPSR*SHKGNPGTAAPGGS
Trigger: AGAGCCTCCGGGAGCAGCGGTCCCAGGGTTTCCTTTGTGACTGCACCGTGATGGTGGGTAGTACCCAGTTCTTGGCCCATCGGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000527994.1
ENST00000673933.1
CDS-3UTR CAA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATGCCAGGGCCCGGGCTaGAAGCCGCCGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPCQGPG*KPPLTH
Trigger: GTGTGTAAGCGGCGGCTTCAAGCCCGGGCCCTGGCA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 90 bp AGGAAACCCTGGGACCGCTGCTCCCGGAGGCTCTGCAGCAGCTGCTaGCTGTGTTCTGGGAACTCCATAGTACCCCACGAAGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RKPWDRCSRRLCSSC*LCSGNSIVPHEGKG
Trigger: CCCCTTTCCTTCGTGGGGTACTATGGAGTTCCCAGAACACAGTCAGCAGCTGCTGCAGAGCCTCCGGGAGCAGCGGTCCCAGGGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000527994.1
ENST00000673933.1
CDS TCA 90 bp GTGGAGCTACTAGGGCTGGCAAGAGAGACATCAGCCACTGGTGGATaGGGTGCCCGCAGATGTGGTGCGTCAACCTCCATGCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: VELLGLARETSATGG*GARRCGASTSMPGC
Trigger: ACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 90 bp AGACAGGTAAAGTGGCTCATGCAGGGATGCGGGTGCAGGCAGAGGTaGGGTCACCAGTCCTCGATGATACTGCCCTGCACCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RQVKWLMQGCGCRQR*GHQSSMILPCTWQQ
Trigger: CTGCTGCCAGGTGCAGGGCAGTATCATCGAGGACTGGTGACCTCACCTCTGCCTGCACCCGCATCCCTGCATGAGCCACTTTACCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 90 bp GAGGCTGCACCCCTAGAAGGGGTCCCACTTCTGGATCTGGTTTGCTaGGTTTGGCCAGGTCCTCATTGTGAGCCTTGCGGATGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: EAAPLEGVPLLDLVC*VWPGPHCEPCGCGG
Trigger: ACCGCCACATCCGCAAGGCTCACAATGAGGACCTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTTCTAGGGGTGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp GTAGGTGAGGGAGCAGCAGAGCCTTTCCATTCCCCTTTGCCCCAGTaGCCTGATGTCTCAGCAGATGCCAACGAAGGTTGGGTGCCACGG +
Preference number: 5 (lower is better)
Translates to: VGEGAAEPFHSPLPQ*PDVSADANEGWVPR
Trigger: CCGTGGCACCCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAGGCTCTGCTGCTCCCTCACCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp GGCAAGAGAGACATCAGCCACTGGTGGATGAGGTGCCCGCAGATGTaGTGCGTCAACCTCCATGCCAGGCTGTGTAGTGTCAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: GKRDISHWWMRCPQM*CVNLHARLCSVSPT
Trigger: AGTGGGGCTGACACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp CTCAGTGGAGCTACTAGGGCTGGCAAGAGAGACATCAGCCACTGGTaGATGAGGTGCCCGCAGATGTGGTGCGTCAACCTCCATGCCAGG +
Preference number: 5 (lower is better)
Translates to: LSGATRAGKRDISHW*MRCPQMWCVNLHAR
Trigger: CCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGCTCCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp GGTCTCAGTGGAGCTACTAGGGCTGGCAAGAGAGACATCAGCCACTaGTGGATGAGGTGCCCGCAGATGTGGTGCGTCAACCTCCATGCC +
Preference number: 5 (lower is better)
Translates to: GLSGATRAGKRDISH*WMRCPQMWCVNLHA
Trigger: GGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGCTCCACTGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCATTTCGCTCCCAGGCCTaGCCAGGCGATGCCTCTACG +
Preference number: 5 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPFRSQA*PGDAST
Trigger: CGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAAA...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 90 bp GCTACTAGGGCTGGCAAGAGAGACATCAGCCACTGGTGGATGAGGTaGCCGCAGATGTGGTGCGTCAACCTCCATGCCAGGCTGTGTAGT +
Preference number: 5 (lower is better)
Translates to: ATRAGKRDISHWWMR*PQMWCVNLHARLCS
Trigger: ACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 90 bp TGGGTCTTCAAAAGCCTCTGGCTGGGAGGGCTGTGCCCCATACACTaGTCCTCCAGATGGGAAAGCTCTCTCAGGACCCTGAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WVFKSLWLGGLCPIH*SSRWESSLRTLRLF
Trigger: GAACAGCCTCAGGGTCCTGAGAGAGCTTTCCCATCTGGAGGAGCAGTGTATGGGGCACAGCCCTCCCAGCCAGAGGCTTTTGAAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 90 bp AAGAGAGACATCAGCCACTGGTGGATGAGGTGCCCGCAGATGTGGTaGGTCAACCTCCATGCCAGGCTGTGTAGTGTCAGCCCCACTAGA +
Preference number: 5 (lower is better)
Translates to: KRDISHWWMRCPQMW*VNLHARLCSVSPTR
Trigger: TCTAGTGGGGCTGACACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGTCCTCCAGGATCCTTaGGTTCCACCACCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRVLQDP*VPPPSD
Trigger: GTCTGAGGGTGGTGGAACCAAAGGATCCTGGAGGAC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTTCTGGGGGATAGAAGCCTaGCAGTGGTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: AEPLFLSPSRGDKVPPTFWGIEA*QWSSRI
Trigger: GATCCTGGAGGACCACTGCAAGGCTTCTATCCCCCA...GAAGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp CTTTCAGCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGTGGGGGATAGAAGCCTaGCAGTGGTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LSAWAEPLFLSPSRGDKVWGIEA*QWSSRI
Trigger: GATCCTGGAGGACCACTGCAAGGCTTCTATCCCCCA...CACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGCTGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GCCTGGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAGCAGAGCCTTTATTCTaGTCACCCAGCAGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: AWAEPLFLSPSRGDKVPPAEPLF*SPSRGD
Trigger: ATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC...TGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000530112.2
ENST00000673933.1
CDS-3UTR CAA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGTTTCCTCCTCCTTCTaGGTACTGTCTGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLVSSSF*VLSASA
Trigger: GGCAGAGGCAGACAGTACCAAGAAGGAGGAGGAAAC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAACACGGGTAGATGAGGGTCTGTaGGCAGGAAGTGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: ADHEVRSVRRSRPSWLTRVDEGL*AGSGHL
Trigger: CAAGTGACCACTTCCTGCCAACAGACCCTCATCTAC...CCGTGTTAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp GGGCAGAGCCTTTATTCTTGTCACCCAGCAGGGGTGATAAGGTGCCACCAACCTGCAGAGCCTTTATTCTaGTCACCCAGCAGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: GQSLYSCHPAGVIRCHQPAEPLF*SPSRGD
Trigger: ATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC...AGGTTGGTGGCACCTTATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000530112.2
ENST00000673933.1
CDS CCA 90 bp CCTTTGCCCCAGTGGCCTGATGTCTCAGCAGATGCCAACGAAGGTTaGGTGCCACGGGAAGTACTAGACAAAAACTCCAAACTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PLPQWPDVSADANEG*VPREVLDKNSKLGS
Trigger: GCTTCCTAGTTTGGAGTTTTTGTCTAGTACTTCCCGTGGCACCCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp AGATGGGCGGATCACGAGGTCAGATCTGTCAGAAGATCGAGACCATCCTGGCTAGCAGAGCCTTTATTCTaGTCACCCAGCAGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: RWADHEVRSVRRSRPSWLAEPLF*SPSRGD
Trigger: ATCACCCCTGCTGGGTGACAAGAATAAAGGCTCTGC...TAGCCAGGATGGTCTCGATCTTCTGACAGATCTGACCTCGTGATCCGCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 90 bp GCAGGTGGGAACATCCTCAGTAAAAACCCCAAAGCTTCCTGGAGCTaGTTCGTACTCAGAAGACAGGTAAAGTGGCTCATGCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: AGGNILSKNPKASWS*FVLRRQVKWLMQGC
Trigger: GCATCCCTGCATGAGCCACTTTACCTGTCTTCTGAGTACGAAGCAGCTCCAGGAAGCTTTGGGGTTTTTACTGAGGATGTTCCCACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp CTCGCACTGTCACCCAGGGTTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACTCAAAAATAGTCACTaGCTGGTAAGGGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: LALSPRVGVQWRDLGSLQLKNSH*LVRVHS
Trigger: ACTGTGAACCCTTACCAGCAAGTGACTATTTTTGAG...TTGCAGTGAGCCGAGATCACGCCATTGCACTCCAACCCTGGGTGACAGTGCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS TCA 90 bp GGTGCCACGGGAAGTACTAGACAAAAACTCCAAACTAGGAAGCTGTaGGTTGGTTTCCTCCTCCTTCTTGGTACTGTCTGCCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GATGSTRQKLQTRKL*VGFLLLLGTVCLCQ
Trigger: CTGGCAGAGGCAGACAGTACCAAGAAGGAGGAGGAAACCAACTCACAGCTTCCTAGTTTGGAGTTTTTGTCTAGTACTTCCCGTGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTGCCAGGGCCCGGGCTaGAAGCCGCCGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHCQGPG*KPPLTH
Trigger: GTGTGTAAGCGGCGGCTTCAAGCCCGGGCCCTGGCA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp GGTCAGCTGGCCAGCATACATAAAGTCCAGAAGCAGCCCAAAGGCTaGGGCTGTGACAATTTCATTGTGAATACACACCAGATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GQLASIHKVQKQPKG*GCDNFIVNTHQIPL
Trigger: AAGAGGGATCTGGTGTGTATTCACAATGAAATTGTCACAGCCCCAGCCTTTGGGCTGCTTCTGGACTTTATGTATGCTGGCCAGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000527994.1
ENST00000673933.1
CDS CCA 90 bp TGTCTTGCAGGTGGGAACATCCTCAGTAAAAACCCCAAAGCTTCCTaGAGCTGCTTCGTACTCAGAAGACAGGTAAAGTGGCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: CLAGGNILSKNPKAS*SCFVLRRQVKWLMQ
Trigger: CTGCATGAGCCACTTTACCTGTCTTCTGAGTACGAAGCAGCTCCAGGAAGCTTTGGGGTTTTTACTGAGGATGTTCCCACCTGCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 90 bp AAGAGCAGCCTAGCATCAGCTCATGCTCCCTTAGATGTTAGTTTTTaGGGCCAATACAAAATCTTTAGGTGGCCCTCCACCACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: KSSLASAHAPLDVSF*GQYKIFRWPSTTAA
Trigger: AGCAGCAGTGGTGGAGGGCCACCTAAAGATTTTGTATTGGCCCCAAAAACTAACATCTAAGGGAGCATGAGCTGATGCTAGGCTGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACTTTCGCTCCCAGGCCTaGCCAGGCGATGCCTCTACG +
Preference number: 5 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHFRSQA*PGDAST
Trigger: CGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAAA...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp ATACCTTCATTGCTAGCTTTATGTTCCAGAACATACAGTGAGAAGCGATTACACGTCCTCCAGGATCCTTaGGTTCCACCACCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: IPSLLALCSRTYSEKRLHVLQDP*VPPPSD
Trigger: GTCTGAGGGTGGTGGAACCAAAGGATCCTGGAGGAC...GTGTAATCGCTTCTCACTGTATGTTCTGGAACATAAAGCTAGCAATGAAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS-3UTR CAA 90 bp TTCAGCAGAAAAATGTTAACCATCTTTTGCTTCCCATATGTCCTAGTTAAGGAGCACTGTCACCCAGGGTaGGAGTGCAATGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: FSRKMLTIFCFPYVLVKEHCHPG*ECNGVI
Trigger: GATCACGCCATTGCACTCCAACCCTGGGTGACAGTG...CTCCTTAACTAGGACATATGGGAAGCAAAAGATGGTTAACATTTTTCTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530112.2
CDS CAA 90 bp ACTGCCCTGCACCTGGCAGCAGATGGTAGGGTAGATGAGGGTCTGTaGGCAGGAAGTGGTCACTTGGCCCCACCTCCTCCAGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: TALHLAADGRVDEGL*AGSGHLAPPPPVLL
Trigger: CAGCAGGACTGGAGGAGGTGGGGCCAAGTGACCACTTCCTGCCAACAGACCCTCATCTACCCTACCATCTGCTGCCAGGTGCAGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 72 bp GCTGGCAAGAGAGACATCAGCCACTGGTGGATGAGGTaGCCGCAGATGTGGTGCGTCAACCTCCATGCCAGG +
Preference number: 6 (lower is better)
Translates to: AGKRDISHWWMR*PQMWCVNLHAR
Trigger: CCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 72 bp CTAAGGACTACCAGGGTGGGAACTAGCGGAGAAAGCTaGTACCTCACCCACCACCGAGCAGCCACAGGGCGA +
Preference number: 6 (lower is better)
Translates to: LRTTRVGTSGES*YLTHHRAATGR
Trigger: TCGCCCTGTGGCTGCTCGGTGGTGGGTGAGGTATCAGCTTTCTCCGCTAGTTCCCACCCTGGTAGTCCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 72 bp CTAGGGCTGGCAAGAGAGACATCAGCCACTGGTGGATaGGGTGCCCGCAGATGTGGTGCGTCAACCTCCATG +
Preference number: 6 (lower is better)
Translates to: LGLARETSATGG*GARRCGASTSM
Trigger: CATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 72 bp GATGGGCCAAGAACTGGGTACTACCCACCATCACGGTaGAGTCACAAAGGAAACCCTGGGACCGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: DGPRTGYYPPSR*SHKGNPGTAAP
Trigger: GGGAGCAGCGGTCCCAGGGTTTCCTTTGTGACTGCACCGTGATGGTGGGTAGTACCCAGTTCTTGGCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000527994.1
ENST00000673933.1
CDS GCA 72 bp ATCAGCCACTGGTGGATGAGGTGCCCGCAGATGTGGTaGGTCAACCTCCATGCCAGGCTGTGTAGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: ISHWWMRCPQMW*VNLHARLCSVS
Trigger: GCTGACACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 72 bp AAAAGCCTCTGGCTGGGAGGGCTGTGCCCCATACACTaGTCCTCCAGATGGGAAAGCTCTCTCAGGACCCTG +
Preference number: 6 (lower is better)
Translates to: KSLWLGGLCPIH*SSRWESSLRTL
Trigger: CAGGGTCCTGAGAGAGCTTTCCCATCTGGAGGAGCAGTGTATGGGGCACAGCCCTCCCAGCCAGAGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp GACATCAGCCACTGGTGGATGAGGTGCCCGCAGATGTaGTGCGTCAACCTCCATGCCAGGCTGTGTAGTGTC +
Preference number: 6 (lower is better)
Translates to: DISHWWMRCPQM*CVNLHARLCSV
Trigger: GACACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp GCTACTAGGGCTGGCAAGAGAGACATCAGCCACTGGTaGATGAGGTGCCCGCAGATGTGGTGCGTCAACCTC +
Preference number: 6 (lower is better)
Translates to: ATRAGKRDISHW*MRCPQMWCVNL
Trigger: GAGGTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp GGAGCTACTAGGGCTGGCAAGAGAGACATCAGCCACTaGTGGATGAGGTGCCCGCAGATGTGGTGCGTCAAC +
Preference number: 6 (lower is better)
Translates to: GATRAGKRDISH*WMRCPQMWCVN
Trigger: GTTGACGCACCACATCTGCGGGCACCTCATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CAA 72 bp CACCTGGCAGCAGATGGTAGGGTAGATGAGGGTCTGTaGGCAGGAAGTGGTCACTTGGCCCCACCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HLAADGRVDEGL*AGSGHLAPPPP
Trigger: TGGAGGAGGTGGGGCCAAGTGACCACTTCCTGCCAACAGACCCTCATCTACCCTACCATCTGCTGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CAA 90 bp CGTCCAACGGCTCCACGAAGTAGAGATCTTTTTCGCTCCCAGGCCTaGCCAGGCGATGCCTCTACGCCCCACTTCGAGAACTCCCTAAGC +
Preference number: 6 (lower is better)
Translates to: RPTAPRSRDLFRSQA*PGDASTPHFENSLS
Trigger: GCTTAGGGAGTTCTCGAAGTGGGGCGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAAAAAGATCTCTACTTCGTGGAGCCGTTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CAA 90 bp GGACGGACAGTAGGTGAGGGAGCAGCAGAGCCTTTCCATTCCCCTTaGCCCCAGTGGCCTGATGTCTCAGCAGATGCCAACGAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: GRTVGEGAAEPFHSP*PQWPDVSADANEGW
Trigger: CCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAGGCTCTGCTGCTCCCTCACCTACTGTCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 72 bp AGCAGAGCCTTTCCATTCCCCTTTGCCCCAGTGGCCTaGTGTCTCAGCAGATGCCAACGAAGGTTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SRAFPFPFAPVA*CLSRCQRRLGA
Trigger: GGCACCCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAGGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 72 bp CCCCTAGAAGGGGTCCCACTTCTGGATCTGGTTTGCTaGGTTTGGCCAGGTCCTCATTGTGAGCCTTGCGGA +
Preference number: 6 (lower is better)
Translates to: PLEGVPLLDLVC*VWPGPHCEPCG
Trigger: TCCGCAAGGCTCACAATGAGGACCTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTTCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp GGAGCAGCAGAGCCTTTCCATTCCCCTTTGCCCCAGTaGCCTGATGTCTCAGCAGATGCCAACGAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: GAAEPFHSPLPQ*PDVSADANEGW
Trigger: CCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTGGGGCAAAGGGGAATGGAAAGGCTCTGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp GAAGGGGTCCCACTTCTGGATCTGGTTTGCTGCGTTTaGCCAGGTCCTCATTGTGAGCCTTGCGGATGTGGC +
Preference number: 6 (lower is better)
Translates to: EGVPLLDLVCCV*PGPHCEPCGCG
Trigger: GCCACATCCGCAAGGCTCACAATGAGGACCTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CAA 72 bp GCTCCACGAAGTAGAGATCTTTTTCGCTCCCAGGCCTaGCCAGGCGATGCCTCTACGCCCCACTTCGAGAAC +
Preference number: 6 (lower is better)
Translates to: APRSRDLFRSQA*PGDASTPHFEN
Trigger: GTTCTCGAAGTGGGGCGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAAAAAGATCTCTACTTCGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CAA 90 bp CTGAGGCTGGGGGATAGAAGCCTTGCAGTGGTCCTCCAGGATCCTTaGGTTCCACCACCCTCAGACTCTCAGGACCCACATCAAGAGATG +
Preference number: 6 (lower is better)
Translates to: LRLGDRSLAVVLQDP*VPPPSDSQDPHQEM
Trigger: CATCTCTTGATGTGGGTCCTGAGAGTCTGAGGGTGGTGGAACCAAAGGATCCTGGAGGACCACTGCAAGGCTTCTATCCCCCAGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 72 bp AGACATTGGTGGCTCATCTGGAGGACGGACAGTAGGTaGGGGAGCAGCAGAGCCTTTCCATTCCCCTTTGCC +
Preference number: 6 (lower is better)
Translates to: RHWWLIWRTDSR*GSSRAFPFPFA
Trigger: GGCAAAGGGGAATGGAAAGGCTCTGCTGCTCCCTCACCTACTGTCCGTCCTCCAGATGAGCCACCAATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS GCA 72 bp CTCCACGAAGTAGAGATCTTTTTCGCTCCCAGGCCTTaGCAGGCGATGCCTCTACGCCCCACTTCGAGAACT +
Preference number: 6 (lower is better)
Translates to: LHEVEIFFAPRP*QAMPLRPTSRT
Trigger: AGTTCTCGAAGTGGGGCGTAGAGGCATCGCCTGGCAAGGCCTGGGAGCGAAAAAGATCTCTACTTCGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS CCA 72 bp TCTTCATCAGAGATCACAATAGCTTCAACTTTCACCTaGACCAGCTCAGCTTCAGCTGGGGCTGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSSEITIASTFT*TSSASAGAGAW
Trigger: CCAGGCTCCAGCCCCAGCTGAAGCTGAGCTGGTCCAGGTGAAAGTTGAAGCTATTGTGATCTCTGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1
CDS TCA 72 bp AGCAGCCCAAAGGCTGGGGCTGTGACAATTTCATTGTaGATACACACCAGATCCCTCTTGTCCAATTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSPKAGAVTISL*IHTRSLLSNSR
Trigger: GCGGGAATTGGACAAGAGGGATCTGGTGTGTATTCACAATGAAATTGTCACAGCCCCAGCCTTTGGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394807.5
ENST00000527994.1
ENST00000673933.1
CDS CCA 72 bp CAGTGGCCTGATGTCTCAGCAGATGCCAACGAAGGTTaGGTGCCACGGGAAGTACTAGACAAAAACTCCAAA +
Preference number: 6 (lower is better)
Translates to: QWPDVSADANEG*VPREVLDKNSK
Trigger: TTTGGAGTTTTTGTCTAGTACTTCCCGTGGCACCCAACCTTCGTTGGCATCTGCTGAGACATCAGGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394807.5
ENST00000673933.1