RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB21 (Homo sapiens)

Ensembl gene IDs: ENSG00000173276

Ensembl transcript IDs: ENST00000310826.10, ENST00000398497.2, ENST00000398499.5, ENST00000398505.7, ENST00000398511.3, ENST00000425521.1, ENST00000449949.5, ENST00000465968.5

Found 697 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGCCAACTTTAGATCTGTTAATTCTTCCATCTCTCCCTCACCCTaGTCAGAGAGTTGGCCTTGTAGGTGCATCCACACCGCACCTCCG +
Preference number: 1 (lower is better)
Translates to: KANFRSVNSSISPSP*SESWPCRCIHTAPP
Trigger: CGGAGGTGCGGTGTGGATGCACCTACAAGGCCAACTCTCTGATCAGGGTGAGGGAGAGATGGAAGAATTAACAGATCTAAAGTTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATaGGAATGCCACAAGCTGGAGTACCCGCTGAGATACACTGAAAGA +
Preference number: 1 (lower is better)
Translates to: LLQNLNTNFVFSPVT*ECHKLEYPLRYTER
Trigger: TCTTTCAGTGTATCTCAGCGGGTACTCCAGCTTGTGGCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR TCA 90 bp TATATGTCGTATATATTGTTCTTGGAAAGCATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTCTATCTGGAAGTAAATGGTAATTTA +
Preference number: 1 (lower is better)
Translates to: YMSYILFLESMLKLQ*GVSPLLYLEVNGNL
Trigger: TAAATTACCATTTACTTCCAGATAGAGCAGAGGAGAAACACCTCACTGCAGTTTCAACATGCTTTCCAAGAACAATATATACGACATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAGCTGGAGTACCCGCTaGGATACACTGAAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSWSTR*DTLKEH
Trigger: ATGCTCTTTCAGTGTATCTCAGCGGGTACTCCAGCT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECMLKLQ*GVSPLL
Trigger: GAGCAGAGGAGAAACACCTCACTGCAGTTTCAACAT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTGACACCATGGAATaGGGAACCATGCACACAATC +
Preference number: 2 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTDTME*GTMHTI
Trigger: GATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTCACAATTCAGGTTaGAATCTGGGGACTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFHNSG*NLGTAS
Trigger: GGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTTTCACAATTCAGGTTaGAATCTGGGGACTGCCTCC +
Preference number: 2 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIFHNSG*NLGTAS
Trigger: GGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAACTGACACCATGGAATaGGGAACCATGCACACAATC +
Preference number: 2 (lower is better)
Translates to: RMALPMILTIRPPTNSNRTDTME*GTMHTI
Trigger: GATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACTGACACCATGGAATaGGGAACCATGCACACAATC +
Preference number: 2 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTDTME*GTMHTI
Trigger: GATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMLKLQ*GVSPLL
Trigger: GAGCAGAGGAGAAACACCTCACTGCAGTTTCAACAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACGGTCACTCATTAAGTaGTGGGGCACATTTTTACAG +
Preference number: 2 (lower is better)
Translates to: LREQTHFIPVSQQLLSLARSLIK*WGTFLQ
Trigger: CTGTAAAAATGTGCCCCAGCACTTAATGAGTGACCG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCATTATACTGACACCATaGAATGAGGAACCATGCACA +
Preference number: 2 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECIILTP*NEEPCT
Trigger: TGTGCATGGTTCCTCATTCCATGGTGTCAGTATAAT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAAGCTGTGCTAATTCTTaGGTGTCTGGGATCTATGTA +
Preference number: 2 (lower is better)
Translates to: LREQTHFIPVSQQLLSLASCANS*VSGIYV
Trigger: TACATAGATCCCAGACACTCAAGAATTAGCACAGCT...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAGCTGTGCTAATTCTTaGGTGTCTGGGATCTATGTA +
Preference number: 2 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSCANS*VSGIYV
Trigger: TACATAGATCCCAGACACTCAAGAATTAGCACAGCT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCTTGGAAAGCATGTTaGAACTGCAGTGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISWKAC*NCSEVF
Trigger: AAACACCTCACTGCAGTTTCAACATGCTTTCCAAGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATGTCTTCTTTTGAAGTaGCAGCTACCAAGATGGACA +
Preference number: 2 (lower is better)
Translates to: LREQTHFIPVSQQLLSLACLLLK*QLPRWT
Trigger: TGTCCATCTTGGTAGCTGTCACTTCAAAAGAAGACA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATTATACTGACACCATaGAATGAGGAACCATGCACA +
Preference number: 2 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVIILTP*NEEPCT
Trigger: TGTGCATGGTTCCTCATTCCATGGTGTCAGTATAAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 2 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGAAACTGTCTTCTTTTaGAGTGACAGCTACCAAGAT +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIETVFF*SDSYQD
Trigger: ATCTTGGTAGCTGTCACTTCAAAAGAAGACAGTTTC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR GCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 2 (lower is better)
Translates to: RMALPMILTIRPPTNSNRWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 2 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAAAAAGCAGGCATCCTaGATACTTACATGGAATAAA +
Preference number: 2 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECKKQAS*ILTWNK
Trigger: TTTATTCCATGTAAGTATGCAGGATGCCTGCTTTTT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATTATACTGACACCATaGAATGAGGAACCATGCACA +
Preference number: 2 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWIILTP*NEEPCT
Trigger: TGTGCATGGTTCCTCATTCCATGGTGTCAGTATAAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATTATACTGACACCATaGAATGAGGAACCATGCACA +
Preference number: 2 (lower is better)
Translates to: RMALPMILTIRPPTNSNRIILTP*NEEPCT
Trigger: TGTGCATGGTTCCTCATTCCATGGTGTCAGTATAAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCCTGCATACTTACATaGAATAAAGAGCTTTCTACA +
Preference number: 2 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSCILT*NKELST
Trigger: TGTAGAAAGCTCTTTATTCCATGTAAGTATGCAGGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 2 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR TCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCCTTTTGAAACACATTaGACTTTGGATATCCTACTG +
Preference number: 2 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIPFETH*TLDILL
Trigger: CAGTAGGATATCCAAAGTTCAATGTGTTTCAAAAGG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGAAACTGTCTTCTTTTaGAGTGACAGCTACCAAGAT +
Preference number: 2 (lower is better)
Translates to: INVPFQTRKPRTSHISPQETVFF*SDSYQD
Trigger: ATCTTGGTAGCTGTCACTTCAAAAGAAGACAGTTTC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 2 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATTTACACCAAGTATTTaGCTACTGGCTGAGATAAAC +
Preference number: 2 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAFTPSI*LLAEIN
Trigger: GTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR GCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTTACACCAAGTATTTaGCTACTGGCTGAGATAAAC +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIFTPSI*LLAEIN
Trigger: GTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCTGAATTTAGACTGTaGTGCAGTGTACATGTAACA +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISEFRL*CSVHVT
Trigger: TGTTACATGTACACTGCACCACAGTCTAAATTCAGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTCCTACCACTGGTATaGAATGTTGGCAATAAGATT +
Preference number: 2 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIFLPLV*NVGNKI
Trigger: AATCTTATTGCCAACATTCCATACCAGTGGTAGGAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 2 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTCCTGCATACTTACATaGAATAAAGAGCTTTCTACA +
Preference number: 2 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSISCILT*NKELST
Trigger: TGTAGAAAGCTCTTTATTCCATGTAAGTATGCAGGA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTGAATTTAGACTGTGGTaGAGTGTACATGTAACATGG +
Preference number: 2 (lower is better)
Translates to: RPTCFTPSICLLAEINILEFRLW*SVHVTW
Trigger: CCATGTTACATGTACACTGCACCACAGTCTAAATTC...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 2 (lower is better)
Translates to: RPTCFTPSICLLAEINILNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR TCA 72 bp AGTTGGCCTTGTAGGTGCATCCACACCGCACCTCCGTaGACAGACACATTTTATTCCTGTTTCACAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SWPCRCIHTAPP*TDTFYSCFTAA
Trigger: AGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAGGTGCGGTGTGGATGCACCTACAAGGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: INVPFQTRKPRTSHISPQISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR TCA 72 bp CAGTCACATGGGAATGCCACAAGCTGGAGTACCCGCTaGGATACACTGAAAGAGCATATTAAAAATTACAAA +
Preference number: 3 (lower is better)
Translates to: QSHGNATSWSTR*DTLKEHIKNYK
Trigger: TTTGTAATTTTTAATATGCTCTTTCAGTGTATCTCAGCGGGTACTCCAGCTTGTGGCATTCCCATGTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCACTAGCTAATGAGTaGCAACAATTTAAGACCAAC +
Preference number: 3 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISLANE*QQFKTN
Trigger: GTTGGTCTTAAATTGTTGCAACTCATTAGCTAGTGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR TCA 72 bp CATGGTACAAGTTTTTATAACAATGTCTATCACTACTaGAGCCCTTATAAACTGACTGTAGGGGACTTCCAT +
Preference number: 3 (lower is better)
Translates to: HGTSFYNNVYHY*SPYKLTVGDFH
Trigger: ATGGAAGTCCCCTACAGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATTGTTATAAAAACTTGTACCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR TCA 72 bp TATATATTGTTCTTGGAAAGCATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTCTATCTGGAAGTAAAT +
Preference number: 3 (lower is better)
Translates to: YILFLESMLKLQ*GVSPLLYLEVN
Trigger: ATTTACTTCCAGATAGAGCAGAGGAGAAACACCTCACTGCAGTTTCAACATGCTTTCCAAGAACAATATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTCCACTTCTTCCTATTTaGGACTTAAGAACATGGTTA +
Preference number: 3 (lower is better)
Translates to: RPTCFTPSICLLAEINILPLLPI*DLRTWL
Trigger: TAACCATGTTCTTAAGTCCAAAATAGGAAGAAGTGG...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
3UTR TCA 72 bp AAACCTCAATTAAATGATTATACTGACACCATGGAATaGGGAACCATGCACACAATCAAGACTAATCCAATT +
Preference number: 3 (lower is better)
Translates to: KPQLNDYTDTME*GTMHTIKTNPI
Trigger: AATTGGATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGTATAATCATTTAATTGAGGTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR TCA 72 bp ATGGACAGAGTAAGAAATACCACATTATACGCGGAATaGATTCAATGTACAATAATCCATCCTGATGTTTCA +
Preference number: 3 (lower is better)
Translates to: MDRVRNTTLYAE*IQCTIIHPDVS
Trigger: TGAAACATCAGGATGGATTATTGTACATTGAATTCATTCCGCGTATAATGTGGTATTTCTTACTCTGTCCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTGGATCTTGGGCAGTaGTGGTGGCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLDLGQ*WWRWQR
Trigger: CCTCTGCCACCGCCACCACCACTGCCCAAGATCCAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCAGAGGCTGGATCTTaGGCAGTGGTGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPEAGS*AVVVAV
Trigger: CACCGCCACCACCACTGCCCAAGATCCAGCCTCTGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECRARKT*GCSKGR
Trigger: TCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGGTCCGACAGCGGGCTaGTGGGCTCAGTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVGPTAG*WAQSLC
Trigger: GCATAAAGACTGAGCCCAGCAGCCCGCTGTCGGACC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGGCAGCTGCTGTTGTTaGCGCATCTCCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECGSCCC*RISHSD
Trigger: GTCACTGTGGGAGATGCGGCAACAACAGCAGCTGCC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTTCTTTGGGGGCTGTaGTGGCCTCGGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLLWGL*WPRVPL
Trigger: AAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCGACAGCGGGCTGCTaGGCTCAGTCTTTATGCGCA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPTAGC*AQSLCA
Trigger: TGCGCATAAAGACTGAGCCCAGCAGCCCGCTGTCGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTTTGGGGGCTGTGCTaGCCTCGGGTGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLWGLC*PRVPLL
Trigger: AAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACGGTGGCAGAGGTGGTaGAGAGGGAGAGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRWQRW*RGRVCG
Trigger: CCCACAAACTCTCCCTCTCCACCACCTCTGCCACCG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCTGGATCTTGGGCAGTaGTGGTGGCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSILDLGQ*WWRWQR
Trigger: CCTCTGCCACCGCCACCACCACTGCCCAAGATCCAG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACCAGAGGCTGGATCTTaGGCAGTGGTGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAPEAGS*AVVVAV
Trigger: CACCGCCACCACCACTGCCCAAGATCCAGCCTCTGG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCAGAGGCTGGATCTTaGGCAGTGGTGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPEAGS*AVVVAV
Trigger: CACCGCCACCACCACTGCCCAAGATCCAGCCTCTGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCAGGCTCCAGAGGCTaGATCTTGGGCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSGSRG*ILGSGG
Trigger: ACCACCACTGCCCAAGATCCAGCCTCTGGAGCCTGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCACACAGCTGTCCTTTaGGACGCTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECHTAVL*DAPHSG
Trigger: CCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAGCTACTCTGTCCCTaGAAACCAGGCTTGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWELLCP*KPGLPR
Trigger: GCGCGGCAAGCCTGGTTTTCAGGGACAGAGTAGCTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGGTCCGACAGCGGGCTaGTGGGCTCAGTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRGPTAG*WAQSLC
Trigger: GCATAAAGACTGAGCCCAGCAGCCCGCTGTCGGACC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGGTCCGACAGCGGGCTaGTGGGCTCAGTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWGPTAG*WAQSLC
Trigger: GCATAAAGACTGAGCCCAGCAGCCCGCTGTCGGACC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGTGCTGGCCTCGGGTaGCTCTTCTTCAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWCAGLG*LFFSLL
Trigger: GAGGAGGCTGAAGAAGAGGCACCCGAGGCCAGCACA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACTTCTTTGGGGGCTGTaGTGGCCTCGGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLLWGL*WPRVPL
Trigger: AAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTTCTTTGGGGGCTGTaGTGGCCTCGGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLLWGL*WPRVPL
Trigger: AAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCGACAGCGGGCTGCTaGGCTCAGTCTTTATGCGCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPTAGC*AQSLCA
Trigger: TGCGCATAAAGACTGAGCCCAGCAGCCCGCTGTCGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACGGCACAGCCGCTCGTaGCTTCCTTGCTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRHSRS*LPCSRR
Trigger: TCTCCTAGAGCAAGGAAGCCACGAGCGGCTGTGCCG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACTTTGGGGGCTGTGCTaGCCTCGGGTGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLALWGLC*PRVPLL
Trigger: AAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACTTTGGGGGCTGTGCTaGCCTCGGGTGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLWGLC*PRVPLL
Trigger: AAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCGGTGGCAGAGGTGGTaGAGAGGGAGAGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRWQRW*RGRVCG
Trigger: CCCACAAACTCTCCCTCTCCACCACCTCTGCCACCG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCAGGCTCCAGAGGCTaGATCTTGGGCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSGSRG*ILGSGG
Trigger: ACCACCACTGCCCAAGATCCAGCCTCTGGAGCCTGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTCGGACAGGCCTGTaGGGCTGTCAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFRTGL*GCQAPE
Trigger: CTCTGGAGCCTGACAGCCCCACAGGCCTGTCCGAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTTCGGACAGGCCTGTaGGGCTGTCAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRFRTGL*GCQAPE
Trigger: CTCTGGAGCCTGACAGCCCCACAGGCCTGTCCGAAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACACACAGCTGTCCTTTaGGACGCTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVHTAVL*DAPHSG
Trigger: CCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGCGGTTGTAGCACTTaGGGCCTGTCATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCGCST*GLSSRA
Trigger: AGCCCTAGATGACAGGCCTCAAGTGCTACAACCGCA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCDRRR*GSCCCC
Trigger: GCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGAGACAGGTCTCTTGTaGCCGACGAAGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVETGLL*PTKMRQ
Trigger: CTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAGCTACTCTGTCCCTaGAAACCAGGCTTGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKELLCP*KPGLPR
Trigger: GCGCGGCAAGCCTGGTTTTCAGGGACAGAGTAGCTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRARKT*GCSKGR
Trigger: TCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRARKT*GCSKGR
Trigger: TCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTGGGATTGGGGCCTTaGAGAACCAGTCACATCACC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLGLGP*RTSHIT
Trigger: GGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGGTCCGACAGCGGGCTaGTGGGCTCAGTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKGPTAG*WAQSLC
Trigger: GCATAAAGACTGAGCCCAGCAGCCCGCTGTCGGACC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGGCAGCTGCTGTTGTTaGCGCATCTCCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWGSCCC*RISHSD
Trigger: GTCACTGTGGGAGATGCGGCAACAACAGCAGCTGCC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACGCTCGTGGCTTCCTTaGTCTAGGAGAGAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRSWLP*SRREES
Trigger: GCTCTCTTCTCTCCTAGAGCAAGGAAGCCACGAGCG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTTCTTTGGGGGCTGTaGTGGCCTCGGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLLWGL*WPRVPL
Trigger: AAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAGTTGGCCTTGTAGGTaGATCCACACCGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSWPCR*IHTAPP
Trigger: CGGAGGTGCGGTGTGGATGCACCTACAAGGCCAACT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCCCTGGTGCATCACTaGACACCGAAGATGATCCCT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSLVHH*TPKMIP
Trigger: AGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACCGACAGCGGGCTGCTaGGCTCAGTCTTTATGCGCA +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQPTAGC*AQSLCA
Trigger: TGCGCATAAAGACTGAGCCCAGCAGCCCGCTGTCGG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCGGCACAGCCGCTCGTaGCTTCCTTGCTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRHSRS*LPCSRR
Trigger: TCTCCTAGAGCAAGGAAGCCACGAGCGGCTGTGCCG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACTTTGGGGGCTGTGCTaGCCTCGGGTGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLWGLC*PRVPLL
Trigger: AAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTTCGGACAGGCCTGTaGGGCTGTCAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQFRTGL*GCQAPE
Trigger: CTCTGGAGCCTGACAGCCCCACAGGCCTGTCCGAAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACGGCACAGCCGCTCGTaGCTTCCTTGCTCAAATTCG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRHSRS*LPCSNS
Trigger: CGAATTTGAGCAAGGAAGCCACGAGCGGCTGTGCCG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTGGCGTGTGCAGGGTTaGTGTAATGCAGTAATCCCT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECWRVQG*CNAVIP
Trigger: AGGGATTACTGCATTACATCAACCCTGCACACGCCA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCACACAGCTGTCCTTTaGGACGCTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWHTAVL*DAPHSG
Trigger: CCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACACACAGCTGTCCTTTaGGACGCTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRHTAVL*DAPHSG
Trigger: CCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGCGGTTGTAGCACTTaGGGCCTGTCATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRCGCST*GLSSRA
Trigger: AGCCCTAGATGACAGGCCTCAAGTGCTACAACCGCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGCGGTTGTAGCACTTaGGGCCTGTCATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWCGCST*GLSSRA
Trigger: AGCCCTAGATGACAGGCCTCAAGTGCTACAACCGCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLACDRRR*GSCCCC
Trigger: GCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAGACAGGTCTCTTGTaGCCGACGAAGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRETGLL*PTKMRQ
Trigger: CTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGAGACAGGTCTCTTGTaGCCGACGAAGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAETGLL*PTKMRQ
Trigger: CTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRARKT*GCSKGR
Trigger: TCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCTGGGATTGGGGCCTTaGAGAACCAGTCACATCACC +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHILGLGP*RTSHIT
Trigger: GGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTGGGATTGGGGCCTTaGAGAACCAGTCACATCACC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLGLGP*RTSHIT
Trigger: GGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGGTATTGGCCTTGACTaGAATGCTAGGAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAGIGLD*NARRGP
Trigger: CGGCCCTCTCCTAGCATTGCAGTCAAGGCCAATACC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGGTATTGGCCTTGACTaGAATGCTAGGAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRGIGLD*NARRGP
Trigger: CGGCCCTCTCCTAGCATTGCAGTCAAGGCCAATACC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGGCCACTCCTGTCAATaGTTTGGTTTCCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECGHSCQ*FGFQNQ
Trigger: CTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCAACACATTCCCTGGTaGATCACTGGACACCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECQHIPW*ITGHRR
Trigger: TCTTCGGTGTCCAGTGATGCACCAGGGAATGTGTTG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTGGGCTCAGTCTTTATaGGCACCTCAGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIWAQSL*APQSQG
Trigger: CCCCTGTGACTGAGGTGCGCATAAAGACTGAGCCCA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGGGCTCAGTCTTTATaGGCACCTCAGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWWAQSL*APQSQG
Trigger: CCCCTGTGACTGAGGTGCGCATAAAGACTGAGCCCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGGCAGCTGCTGTTGTTaGCGCATCTCCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKGSCCC*RISHSD
Trigger: GTCACTGTGGGAGATGCGGCAACAACAGCAGCTGCC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCTTGATGACTTGCTGTaGTTGGGAGCTACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECLDDLL*LGATLS
Trigger: GGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGTTGGCCTTGTAGGTaGATCCACACCGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSWPCR*IHTAPP
Trigger: CGGAGGTGCGGTGTGGATGCACCTACAAGGCCAACT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCCAGTCACATGGGAATaGCACAAGCTGGAGTACCCG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWPVTWE*HKLEYP
Trigger: CGGGTACTCCAGCTTGTGGCATTCCCATGTGACTGG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCAGTCACATGGGAATaGCACAAGCTGGAGTACCCG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPVTWE*HKLEYP
Trigger: CGGGTACTCCAGCTTGTGGCATTCCCATGTGACTGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCCCTGGTGCATCACTaGACACCGAAGATGATCCCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSLVHH*TPKMIP
Trigger: AGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECNLRSA*NLLFAG
Trigger: CCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAGAGGGAGAGTTTGTaGGAACAGGGCACACCTCAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWERESL*EQGTPQ
Trigger: CTGAGGTGTGCCCTGTTCCCACAAACTCTCCCTCTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAGAGGGAGAGTTTGTaGGAACAGGGCACACCTCAG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRERESL*EQGTPQ
Trigger: CTGAGGTGTGCCCTGTTCCCACAAACTCTCCCTCTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTCTGGATCTTGGGCAGTaGTGGTGGCGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILLDLGQ*WWRWQR
Trigger: CCTCTGCCACCGCCACCACCACTGCCCAAGATCCAG...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCAGGCTCCAGAGGCTaGATCTTGGGCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSGSRG*ILGSGG
Trigger: ACCACCACTGCCCAAGATCCAGCCTCTGGAGCCTGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATGCGGTTGTAGCACTTaGGGCCTGTCATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQCGCST*GLSSRA
Trigger: AGCCCTAGATGACAGGCCTCAAGTGCTACAACCGCA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQCDRRR*GSCCCC
Trigger: GCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKCDRRR*GSCCCC
Trigger: GCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAGACAGGTCTCTTGTaGCCGACGAAGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKETGLL*PTKMRQ
Trigger: CTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCTCAAAATTATCTTCTaGCACAGGAGACCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECLKIIF*HRRPVL
Trigger: GAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAATGCCGTGTTGGGTCTaGCAGTGTGTCCACACTTTG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAMPCWV*QCVHTL
Trigger: CAAAGTGTGGACACACTGTCAGACCCAACACGGCAT...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTGGGATTGGGGCCTTaGAGAACCAGTCACATCACC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLGLGP*RTSHIT
Trigger: GGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGCTGCTTATGCACCGTaGACATCTTCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVAAYAP*TSSHTS
Trigger: AGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGATTCCTCTGAAGCCTaGGACATGTGCGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVDSSEA*DMCDWK
Trigger: CTTCCAATCGCACATGTCTCAGGCTTCAGAGGAATC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACACACCGCACCTCCGTaGACAGACACATTTTATTCC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVHTAPP*TDTFYS
Trigger: GGAATAAAATGTGTCTGTTCACGGAGGTGCGGTGTG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGGGCTCAGTCTTTATaGGCACCTCAGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKWAQSL*APQSQG
Trigger: CCCCTGTGACTGAGGTGCGCATAAAGACTGAGCCCA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGACACAGGAGACCCGTaGTCATTCACCTTTAACTTC +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECDTGDP*SFTFNF
Trigger: GAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCGCTCGTGGCTTCCTTaGTCTAGGAGAGAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRSWLP*SRREES
Trigger: GCTCTCTTCTCTCCTAGAGCAAGGAAGCCACGAGCG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTGCTCTCGTGTTCTTaGTTCAGCTCGGGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLLSCS*FSSGEK
Trigger: TTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATGGACTTCAACCTGGTaGCGCCAGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAWTSTW*RQMLKE
Trigger: CTCTTTCAGCATCTGGCGGCACCAGGTTGAAGTCCA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGGACTTCAACCTGGTaGCGCCAGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWWTSTW*RQMLKE
Trigger: CTCTTTCAGCATCTGGCGGCACCAGGTTGAAGTCCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGGACTTCAACCTGGTaGCGCCAGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRWTSTW*RQMLKE
Trigger: CTCTTTCAGCATCTGGCGGCACCAGGTTGAAGTCCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCGCTCCAGCTGCTTATaGACCGTGAACATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRSSCL*TVNIFP
Trigger: TGGGAAGATGTTCACGGTGCATAAGCAGCTGGAGCG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACGCTCCAGCTGCTTATaGACCGTGAACATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRSSCL*TVNIFP
Trigger: TGGGAAGATGTTCACGGTGCATAAGCAGCTGGAGCG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCAAAACAGGTGGCCGTaGTCTCTTCAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIQNRWP*SLQSQL
Trigger: GAGCTGGCTTTGAAGAGACCACGGCCACCTGTTTTG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACAAAACAGGTGGCCGTaGTCTCTTCAAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRQNRWP*SLQSQL
Trigger: GAGCTGGCTTTGAAGAGACCACGGCCACCTGTTTTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCAGAACCAGATCCACTaGATGGGATCACTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECQNQIH*MGSLSL
Trigger: TAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCCCTGGTGCATCACTaGACACCGAAGATGATCCCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSLVHH*TPKMIP
Trigger: AGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCTGGTGCATCACTaGACACCGAAGATGATCCCT +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISLVHH*TPKMIP
Trigger: AGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTCGGCACAGCCGCTCGTaGCTTCCTTGCTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILRHSRS*LPCSRR
Trigger: TCTCCTAGAGCAAGGAAGCCACGAGCGGCTGTGCCG...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTTATGGACTTCAACCTaGTGCCGCCAGATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECLWTST*CRQMLK
Trigger: TTTCAGCATCTGGCGGCACCAGGTTGAAGTCCATAA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTTGTTGGGCTCAGGCTaGGATTGGGGCCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSILLGSG*DWGLEE
Trigger: TTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTGTTGGGCTCAGGCTaGGATTGGGGCCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLLGSG*DWGLEE
Trigger: TTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTGTTGGGCTCAGGCTaGGATTGGGGCCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLLGSG*DWGLEE
Trigger: TTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAGAGGGAGAGTTTGTaGGAACAGGGCACACCTCAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKERESL*EQGTPQ
Trigger: CTGAGGTGTGCCCTGTTCCCACAAACTCTCCCTCTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTTCGGACAGGCCTGTaGGGCTGTCAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFRTGL*GCQAPE
Trigger: CTCTGGAGCCTGACAGCCCCACAGGCCTGTCCGAAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTCTGTGGCTGGAGTTaGGTTTTCGGACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFCGWS*VFGQAC
Trigger: ACAGGCCTGTCCGAAAACCCAACTCCAGCCACAGAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTCTGTGGCTGGAGTTaGGTTTTCGGACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRFCGWS*VFGQAC
Trigger: ACAGGCCTGTCCGAAAACCCAACTCCAGCCACAGAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTTCTGTGGCTGGAGTTaGGTTTTCGGACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIFCGWS*VFGQAC
Trigger: ACAGGCCTGTCCGAAAACCCAACTCCAGCCACAGAA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTGTTTGTGGCTGGTaGCTGTGTACACCGAATCCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTVCGW*LCTPNP
Trigger: AGGATTCGGTGTACACAGCCACCAGCCACAAACAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGCTATCCATCGACAATaGCCGTCTGAGGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWAIHRQ*PSEETL
Trigger: AAGAGTCTCCTCAGACGGTCATTGTCGATGGATAGC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCCCTCCCTGTCTGTTaGCTGAGAAGCACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSLPVC*LRSTKG
Trigger: TCCTTTAGTGCTTCTCAGTCAACAGACAGGGAGGGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTCAAAATTATCTTCTaGCACAGGAGACCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLKIIF*HRRPVL
Trigger: GAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATGCCGTGTTGGGTCTaGCAGTGTGTCCACACTTTG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKMPCWV*QCVHTL
Trigger: CAAAGTGTGGACACACTGTCAGACCCAACACGGCAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGGTGCCATGTTGTTCTaGTTATGGACTTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVGAMLF*LWTSTW
Trigger: CCAGGTTGAAGTCCATAATCAGAACAACATGGCACC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCACAGGCTCCTCTTTaGCTTGGATTTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPQAPL*LGFSVA
Trigger: AGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGCTGCTTATGCACCGTaGACATCTTCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWAAYAP*TSSHTS
Trigger: AGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGCTGCTTATGCACCGTaGACATCTTCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRAAYAP*TSSHTS
Trigger: AGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGATTCCTCTGAAGCCTaGGACATGTGCGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIDSSEA*DMCDWK
Trigger: CTTCCAATCGCACATGTCTCAGGCTTCAGAGGAATC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTTCACAATTCAGGTTaGAATCTGGGGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFHNSG*NLGTAS
Trigger: GGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMLKLQ*GVSPLL
Trigger: GAGCAGAGGAGAAACACCTCACTGCAGTTTCAACAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCACACCGCACCTCCGTaGACAGACACATTTTATTCC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWHTAPP*TDTFYS
Trigger: GGAATAAAATGTGTCTGTTCACGGAGGTGCGGTGTG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGGCCACTCCTGTCAATaGTTTGGTTTCCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWGHSCQ*FGFQNQ
Trigger: CTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACAACACATTCCCTGGTaGATCACTGGACACCGAAGA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRQHIPW*ITGHRR
Trigger: TCTTCGGTGTCCAGTGATGCACCAGGGAATGTGTTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGACACAGGAGACCCGTaGTCATTCACCTTTAACTTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVDTGDP*SFTFNF
Trigger: GAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGGGTTCTTCACTATaGCGTGTTGGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMGSSL*RVGSDS
Trigger: ACTGTCAGACCCAACACGGCATAGTGAAGAACCCAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTTGATGACTTGCTGTaGTTGGGAGCTACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLDDLL*LGATLS
Trigger: GGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTCCTCTTGATGACTTaGTGTGCTTGGGAGCTACTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFLLMT*CAWELL
Trigger: GAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATTGCTCTCGTGTTCTTaGTTCAGCTCGGGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLALLSCS*FSSGEK
Trigger: TTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGGACTTCAACCTGGTaGCGCCAGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKWTSTW*RQMLKE
Trigger: CTCTTTCAGCATCTGGCGGCACCAGGTTGAAGTCCA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCGCTCCAGCTGCTTATaGACCGTGAACATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRSSCL*TVNIFP
Trigger: TGGGAAGATGTTCACGGTGCATAAGCAGCTGGAGCG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCTATTAGGACACGTTaGAAAGGGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSIRTR*KGGLRC
Trigger: ACACCTCAAGCCCCCTTTCCAACGTGTCCTAATAGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECLLSML*FPEPDP
Trigger: TGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGAGACTCTTAACAAGTaGGCCACTCCTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVETLNK*ATPVNA
Trigger: AGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGAACCTCCTTTTTGCTaGGAGTCTGCTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECEPPFC*ESAHVF
Trigger: AAAGACATGAGCAGACTCCCAGCAAAAAGGAGGTTC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLANLRSA*NLLFAG
Trigger: CCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATT...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRNLRSA*NLLFAG
Trigger: CCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTATGGACTTCAACCTaGTGCCGCCAGATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLWTST*CRQMLK
Trigger: TTTCAGCATCTGGCGGCACCAGGTTGAAGTCCATAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTGTTGGGCTCAGGCTaGGATTGGGGCCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLLGSG*DWGLEE
Trigger: TTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTCTGTGGCTGGAGTTaGGTTTTCGGACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFCGWS*VFGQAC
Trigger: ACAGGCCTGTCCGAAAACCCAACTCCAGCCACAGAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCAAACAGTTTTTCTGTaGCTGGAGTTGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECQTVFL*LELGFR
Trigger: CCGAAAACCCAACTCCAGCCACAGAAAAACTGTTTG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAAGACTGTTTGTGGCTaGTGGCTGTGTACACCGAAT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVKTVCG*WLCTPN
Trigger: ATTCGGTGTACACAGCCACCAGCCACAAACAGTCTT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAATCCCTCCATGGCTTaGGTTTATCACTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECNPSMA*VYHFDP
Trigger: AGGATCAAAGTGATAAACTCAAGCCATGGAGGGATT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGCCAAGACGTTTTTATaGGCTCGGAACTTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVAKTFL*ARNFWS
Trigger: AGACCAAAAGTTCCGAGCTCATAAAAACGTCTTGGC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGTTGGAAAGGGGGCTTaGGGTGTTTTAGAAACGATG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRVGKGA*GVLETM
Trigger: CATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAAC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGTTGGAAAGGGGGCTTaGGGTGTTTTAGAAACGATG +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIVGKGA*GVLETM
Trigger: CATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAAC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGTCTTGCAGAGGCTTTaGAGGCAACACTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIVLQRL*RQHCIS
Trigger: AGAAATGCAGTGTTGCCTTCAAAGCCTCTGCAAGAC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGTCTTGCAGAGGCTTTaGAGGCAACACTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRVLQRL*RQHCIS
Trigger: AGAAATGCAGTGTTGCCTTCAAAGCCTCTGCAAGAC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTCTTGCAGAGGCTTTaGAGGCAACACTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVLQRL*RQHCIS
Trigger: AGAAATGCAGTGTTGCCTTCAAAGCCTCTGCAAGAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFPFGS*PLTPGL
Trigger: TAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGCTATCCATCGACAATaGCCGTCTGAGGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKAIHRQ*PSEETL
Trigger: AAGAGTCTCCTCAGACGGTCATTGTCGATGGATAGC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACTGGACACCGAAGATaGTCCCTGGGAAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTGHRR*SLGRFQ
Trigger: TTGAAATCTTCCCAGGGATCATCTTCGGTGTCCAGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCCCTCCCTGTCTGTTaGCTGAGAAGCACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSLPVC*LRSTKG
Trigger: TCCTTTAGTGCTTCTCAGTCAACAGACAGGGAGGGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTCAAAATTATCTTCTaGCACAGGAGACCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLKIIF*HRRPVL
Trigger: GAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCTCAAAATTATCTTCTaGCACAGGAGACCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHILKIIF*HRRPVL
Trigger: GAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAGTGTGTCCACACTTTaGAGTTGGTGTGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSVSTL*SWCETS
Trigger: AGAGGTTTCACACCAACTTCAAAGTGTGGACACACT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGGTGCCATGTTGTTCTaGTTATGGACTTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWGAMLF*LWTSTW
Trigger: CCAGGTTGAAGTCCATAATCAGAACAACATGGCACC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGGTGCCATGTTGTTCTaGTTATGGACTTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRGAMLF*LWTSTW
Trigger: CCAGGTTGAAGTCCATAATCAGAACAACATGGCACC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTGTCGTCTTTTGTGGTaGCGATGTGGTTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECCRLLW*RCGLLC
Trigger: ACAAAGTAAACCACATCGTCACCACAAAAGACGACA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCCACAGGCTCCTCTTTaGCTTGGATTTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIPQAPL*LGFSVA
Trigger: AGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCACAGGCTCCTCTTTaGCTTGGATTTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPQAPL*LGFSVA
Trigger: AGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGCTGCTTATGCACCGTaGACATCTTCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQAAYAP*TSSHTS
Trigger: AGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGATTCCTCTGAAGCCTaGGACATGTGCGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQDSSEA*DMCDWK
Trigger: CTTCCAATCGCACATGTCTCAGGCTTCAGAGGAATC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTTCACAATTCAGGTTaGAATCTGGGGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIFHNSG*NLGTAS
Trigger: GGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAACTGACACCATGGAATaGGGAACCATGCACACAATC +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLATDTME*GTMHTI
Trigger: GATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGT...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWMLKLQ*GVSPLL
Trigger: GAGCAGAGGAGAAACACCTCACTGCAGTTTCAACAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCTTGGAAAGCATGTTaGAACTGCAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSWKAC*NCSEVF
Trigger: AAACACCTCACTGCAGTTTCAACATGCTTTCCAAGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAATCCCTCCATGGCTTaGGTTTATCGGTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRNPSMA*VYRSSV
Trigger: GACTGAAGACCGATAAACTCAAGCCATGGAGGGATT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGCTCTTCTGCACTTTaGTCCTCGCACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWCSSAL*SSHTNS
Trigger: GCTATTTGTGTGCGAGGATCAAAGTGCAGAAGAGCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAGAGAAATGGCGTGTaGAGGGTTGATGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWERNGV*RVDVMQ
Trigger: CTGCATTACATCAACCCTGCACACGCCATTTCTCTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATAGCTTCTCTGTCTTaGAGAGGCTTTGAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVIASLS*RGFEGN
Trigger: GTTGCCTTCAAAGCCTCTGCAAGACAGAGAAGCTAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGGCCACTCCTGTCAATaGTTTGGTTTCCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKGHSCQ*FGFQNQ
Trigger: CTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCAACACATTCCCTGGTaGATCACTGGACACCGAAGA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKQHIPW*ITGHRR
Trigger: TCTTCGGTGTCCAGTGATGCACCAGGGAATGTGTTG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTGGGCTCAGTCTTTATaGGCACCTCAGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILWAQSL*APQSQG
Trigger: CCCCTGTGACTGAGGTGCGCATAAAGACTGAGCCCA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTGGAACCTCCTTTTTaGTGGGAGTCTGCTCATGTC +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHILEPPF*WESAHV
Trigger: GACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTGGAACCTCCTTTTTaGTGGGAGTCTGCTCATGTC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLEPPF*WESAHV
Trigger: GACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGTTTTCTACTGGACTTaGAAGAGGAGCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECVFYWT*KRSMLF
Trigger: AAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAAC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTGCTCTCGTGTTCTTaGTTCAGCTCGGGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLLSCS*FSSGEK
Trigger: TTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACGCTCGTGGCTTCCTTaGTCAAATTCGTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRSWLP*SNSSLF
Trigger: GAATAAAGACGAATTTGAGCAAGGAAGCCACGAGCG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCTATTAGGACACGTTaGAAAGGGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSIRTR*KGGLRC
Trigger: ACACCTCAAGCCCCCTTTCCAACGTGTCCTAATAGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCTATTAGGACACGTTaGAAAGGGGGCTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSIRTR*KGGLRC
Trigger: ACACCTCAAGCCCCCTTTCCAACGTGTCCTAATAGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTGACCACTCACACCTaGTTTATCATCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLTTHT*FIIHSF
Trigger: GAAGCTATGGATGATAAACCAGGTGTGAGTGGTCAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAAACAGACAAAACAGGTaGCCGTGGTCTCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLANRQNR*PWSLQS
Trigger: GCTTTGAAGAGACCACGGCCACCTGTTTTGTCTGTT...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAACAGACAAAACAGGTaGCCGTGGTCTCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRNRQNR*PWSLQS
Trigger: GCTTTGAAGAGACCACGGCCACCTGTTTTGTCTGTT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCAACAGACAAAACAGGTaGCCGTGGTCTCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHINRQNR*PWSLQS
Trigger: GCTTTGAAGAGACCACGGCCACCTGTTTTGTCTGTT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACAGAACCAGATCCACTaGATGGGATCACTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAQNQIH*MGSLSL
Trigger: TAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCAGAACCAGATCCACTaGATGGGATCACTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWQNQIH*MGSLSL
Trigger: TAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLLSML*FPEPDP
Trigger: TGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAGACTCTTAACAAGTaGGCCACTCCTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRETLNK*ATPVNA
Trigger: AGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGAGACTCTTAACAAGTaGGCCACTCCTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIETLNK*ATPVNA
Trigger: AGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKNLRSA*NLLFAG
Trigger: CCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTATGGACTTCAACCTaGTGCCGCCAGATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLWTST*CRQMLK
Trigger: TTTCAGCATCTGGCGGCACCAGGTTGAAGTCCATAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTCACATCACCATTGTaGTCCAAAACGGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVTSPL*SKTGKE
Trigger: TTCTTTGCCCGTTTTGGACCACAATGGTGATGTGAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACAAACAGTTTTTCTGTaGCTGGAGTTGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVQTVFL*LELGFR
Trigger: CCGAAAACCCAACTCCAGCCACAGAAAAACTGTTTG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGCCAAGACGTTTTTATaGGCTCGGAACTTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRAKTFL*ARNFWS
Trigger: AGACCAAAAGTTCCGAGCTCATAAAAACGTCTTGGC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTCTTGCAGAGGCTTTaGAGGCAACACTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVLQRL*RQHCIS
Trigger: AGAAATGCAGTGTTGCCTTCAAAGCCTCTGCAAGAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAFPFGS*PLTPGL
Trigger: TAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACAAATCTATGGAAGGTaGATAGACAGGAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAQIYGR*IDRNLA
Trigger: AGCCAGGTTCCTGTCTATTCACCTTCCATAGATTTG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACAAATCTATGGAAGGTaGATAGACAGGAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRQIYGR*IDRNLA
Trigger: AGCCAGGTTCCTGTCTATTCACCTTCCATAGATTTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCAAATCTATGGAAGGTaGATAGACAGGAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIQIYGR*IDRNLA
Trigger: AGCCAGGTTCCTGTCTATTCACCTTCCATAGATTTG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCAAATCTATGGAAGGTaGATAGACAGGAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWQIYGR*IDRNLA
Trigger: AGCCAGGTTCCTGTCTATTCACCTTCCATAGATTTG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAACTGGACACCGAAGATaGTCCCTGGGAAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQTGHRR*SLGRFQ
Trigger: TTGAAATCTTCCCAGGGATCATCTTCGGTGTCCAGT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTGAAGACCTGCTGTTaGTCTAAAGATCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVKTCC*SKDLKA
Trigger: TGCCTTAAGATCTTTAGATCAACAGCAGGTCTTCAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAGTGTGTCCACACTTTaGAGTTGGTGTGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSVSTL*SWCETS
Trigger: AGAGGTTTCACACCAACTTCAAAGTGTGGACACACT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATATGCTGCTTAAATTaGGAGAGAAAGCGGTACGCT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVICCLN*ERKRYA
Trigger: AGCGTACCGCTTTCTCTCTCAATTTAAGCAGCATAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGGTGCCATGTTGTTCTaGTTATGGACTTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQGAMLF*LWTSTW
Trigger: CCAGGTTGAAGTCCATAATCAGAACAACATGGCACC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGTCGTCTTTTGTGGTaGCGATGTGGTTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCRLLW*RCGLLC
Trigger: ACAAAGTAAACCACATCGTCACCACAAAAGACGACA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTTCTGAAGAATCACTaGACACGTTGTCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVLKNH*TRCRLL
Trigger: CAAAAGACGACAACGTGTTCAGTGATTCTTCAGAAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCCACAGGCTCCTCTTTaGCTTGGATTTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKPQAPL*LGFSVA
Trigger: AGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGTGCGATTGGAAGTaGCTCCAGAGTCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMCDWK*LQSRKL
Trigger: TAATTTTCGACTCTGGAGTCACTTCCAATCGCACAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATTTAAATGTGATTGCTaGAAGGGGTGGGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAFKCDC*KGWGMV
Trigger: TACCATGCCCCACCCCTTTCAGCAATCACATTTAAA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTAAATGTGATTGCTaGAAGGGGTGGGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFKCDC*KGWGMV
Trigger: TACCATGCCCCACCCCTTTCAGCAATCACATTTAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTTCACAATTCAGGTTaGAATCTGGGGACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFHNSG*NLGTAS
Trigger: GGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGACTGACACCATGGAATaGGGAACCATGCACACAATC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKTDTME*GTMHTI
Trigger: GATTGTGTGCATGGTTCCTCATTCCATGGTGTCAGT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAGCTGTGCTAATTCTTaGGTGTCTGGGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSCANS*VSGIYV
Trigger: TACATAGATCCCAGACACTCAAGAATTAGCACAGCT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATGTTGAAACTGCAGTaGGGTGTTTCTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKMLKLQ*GVSPLL
Trigger: GAGCAGAGGAGAAACACCTCACTGCAGTTTCAACAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCTTGGAAAGCATGTTaGAACTGCAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSWKAC*NCSEVF
Trigger: AAACACCTCACTGCAGTTTCAACATGCTTTCCAAGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGTCTTCTTTTGAAGTaGCAGCTACCAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCLLLK*QLPRWT
Trigger: TGTCCATCTTGGTAGCTGTCACTTCAAAAGAAGACA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGAAACTGTCTTCTTTTaGAGTGACAGCTACCAAGAT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECETVFF*SDSYQD
Trigger: ATCTTGGTAGCTGTCACTTCAAAAGAAGACAGTTTC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTGTACAAACCCAATTTaGGACAACAAAGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECCTNPI*DNKGQL
Trigger: AAGTTGGCCTTTGTTGTCTCAAATTGGGTTTGTACA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAGAGAAATGGCGTGTaGAGGGTTGATGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKERNGV*RVDVMQ
Trigger: CTGCATTACATCAACCCTGCACACGCCATTTCTCTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCTGAAAGTATTCGCTaGTGGCAGCCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSESIR*WQPRRF
Trigger: AAAACGTCTTGGCTGCCAGCAGCGAATACTTTCAGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCTGAAAGTATTCGCTaGTGGCAGCCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSESIR*WQPRRF
Trigger: AAAACGTCTTGGCTGCCAGCAGCGAATACTTTCAGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATAGCTTCTCTGTCTTaGAGAGGCTTTGAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRIASLS*RGFEGN
Trigger: GTTGCCTTCAAAGCCTCTGCAAGACAGAGAAGCTAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTGGAACCTCCTTTTTaGTGGGAGTCTGCTCATGTC +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLEPPF*WESAHV
Trigger: GACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTGGAACCTCCTTTTTaGTGGGAGTCTGCTCATGTC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLEPPF*WESAHV
Trigger: GACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGACACAGGAGACCCGTaGTCATTCACCTTTAACTTC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKDTGDP*SFTFNF
Trigger: GAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACTTGCAAGAGGAGCATaGTCTTTTGGTTTAGCAACT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLARGA*SFGLAT
Trigger: AGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTTTTCTACTGGACTTaGAAGAGGAGCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVFYWT*KRSMLF
Trigger: AAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCGGTCACTCATTAAGTaGTGGGGCACATTTTTACAG +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIRSLIK*WGTFLQ
Trigger: CTGTAAAAATGTGCCCCAGCACTTAATGAGTGACCG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATTTCTCTGCTCTTCTaGACTTTGATCCTCGCACAC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRISLLF*TLILAH
Trigger: GTGTGCGAGGATCAAAGTGCAGAAGAGCAGAGAAAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGGTTTTGGGACATGTaGCTTATTGGTATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVWFWDM*LIGIGL
Trigger: AAGGCCAATACCAATAAGCCACATGTCCCAAAACCA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTGACCACTCACACCTaGTTTATCATCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLTTHT*FIIHSF
Trigger: GAAGCTATGGATGATAAACCAGGTGTGAGTGGTCAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAACAGACAAAACAGGTaGCCGTGGTCTCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKNRQNR*PWSLQS
Trigger: GCTTTGAAGAGACCACGGCCACCTGTTTTGTCTGTT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCAGAACCAGATCCACTaGATGGGATCACTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKQNQIH*MGSLSL
Trigger: TAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSILLSML*FPEPDP
Trigger: TGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAGACTCTTAACAAGTaGGCCACTCCTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKETLNK*ATPVNA
Trigger: AGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCACCGAAGATGATCCCTaGGAAGATTTCAAATCTATG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECTEDDP*EDFKSM
Trigger: CATAGATTTGAAATCTTCCCAGGGATCATCTTCGGT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAACCTCCTTTTTGCTaGGAGTCTGCTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWEPPFC*ESAHVF
Trigger: AAAGACATGAGCAGACTCCCAGCAAAAAGGAGGTTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAGCGTAGGGCTTTTCTaGGTTATGGTACATGTTAAC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSVGLF*VMVHVN
Trigger: GTTAACATGTACCATAACCCAGAAAAGCCCTACGCT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAAGAAAAGTTTTCGGTaGGTGCCATGTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECKKSFR*VPCCSD
Trigger: ATCAGAACAACATGGCACCCACCGAAAACTTTTCTT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGTCACATCACCATTGTaGTCCAAAACGGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIVTSPL*SKTGKE
Trigger: TTCTTTGCCCGTTTTGGACCACAATGGTGATGTGAC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGTCACATCACCATTGTaGTCCAAAACGGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAVTSPL*SKTGKE
Trigger: TTCTTTGCCCGTTTTGGACCACAATGGTGATGTGAC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACAAACAGTTTTTCTGTaGCTGGAGTTGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRQTVFL*LELGFR
Trigger: CCGAAAACCCAACTCCAGCCACAGAAAAACTGTTTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGCAGTAATCCCTCCATaGCTTGAGTTTATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWAVIPP*LEFIGL
Trigger: AAGACCGATAAACTCAAGCCATGGAGGGATTACTGC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTTGTGAATAAACTCTaGAAGTATTCGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFVNKL*KYSLLA
Trigger: TGCCAGCAGCGAATACTTTCAGAGTTTATTCACAAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCACAGAAGTCAAGCTaGAATACAGTTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSQKSS*NTVCDS
Trigger: TGAGTCACAAACTGTATTTCAGCTTGACTTCTGTGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFPFGS*PLTPGL
Trigger: TAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTGCTATCCATCGACAATaGCCGTCTGAGGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILAIHRQ*PSEETL
Trigger: AAGAGTCTCCTCAGACGGTCATTGTCGATGGATAGC...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTCCCTCCCTGTCTGTTaGCTGAGAAGCACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILSLPVC*LRSTKG
Trigger: TCCTTTAGTGCTTCTCAGTCAACAGACAGGGAGGGA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTGAAGACCTGCTGTTaGTCTAAAGATCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVKTCC*SKDLKA
Trigger: TGCCTTAAGATCTTTAGATCAACAGCAGGTCTTCAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAAGTGTGTCCACACTTTaGAGTTGGTGTGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQSVSTL*SWCETS
Trigger: AGAGGTTTCACACCAACTTCAAAGTGTGGACACACT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATATGCTGCTTAAATTaGGAGAGAAAGCGGTACGCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRICCLN*ERKRYA
Trigger: AGCGTACCGCTTTCTCTCTCAATTTAAGCAGCATAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGTCGTCTTTTGTGGTaGCGATGTGGTTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWCRLLW*RCGLLC
Trigger: ACAAAGTAAACCACATCGTCACCACAAAAGACGACA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGTTCTGAAGAATCACTaGACACGTTGTCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAVLKNH*TRCRLL
Trigger: CAAAAGACGACAACGTGTTCAGTGATTCTTCAGAAC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGTTCTGAAGAATCACTaGACACGTTGTCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIVLKNH*TRCRLL
Trigger: CAAAAGACGACAACGTGTTCAGTGATTCTTCAGAAC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGTTCTGAAGAATCACTaGACACGTTGTCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRVLKNH*TRCRLL
Trigger: CAAAAGACGACAACGTGTTCAGTGATTCTTCAGAAC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGTGCGATTGGAAGTaGCTCCAGAGTCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMCDWK*LQSRKL
Trigger: TAATTTTCGACTCTGGAGTCACTTCCAATCGCACAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTTAAATGTGATTGCTaGAAGGGGTGGGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFKCDC*KGWGMV
Trigger: TACCATGCCCCACCCCTTTCAGCAATCACATTTAAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAGCTGTGCTAATTCTTaGGTGTCTGGGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSCANS*VSGIYV
Trigger: TACATAGATCCCAGACACTCAAGAATTAGCACAGCT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCCTTTTGAAACACATTaGACTTTGGATATCCTACTG +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECPFETH*TLDILL
Trigger: CAGTAGGATATCCAAAGTTCAATGTGTTTCAAAAGG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGTCTTCTTTTGAAGTaGCAGCTACCAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRCLLLK*QLPRWT
Trigger: TGTCCATCTTGGTAGCTGTCACTTCAAAAGAAGACA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGTACAAACCCAATTTaGGACAACAAAGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCTNPI*DNKGQL
Trigger: AAGTTGGCCTTTGTTGTCTCAAATTGGGTTTGTACA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAAAATCACAACTGCTaGCGATCACGAGATAATCCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRENHNC*RSRDNP
Trigger: TGGATTATCTCGTGATCGTCAGCAGTTGTGATTTTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCTGAAAGTATTCGCTaGTGGCAGCCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSESIR*WQPRRF
Trigger: AAAACGTCTTGGCTGCCAGCAGCGAATACTTTCAGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATAGCTTCTCTGTCTTaGAGAGGCTTTGAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKIASLS*RGFEGN
Trigger: GTTGCCTTCAAAGCCTCTGCAAGACAGAGAAGCTAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAGAATCTGGAAAATCTaGATCAAGGAGAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRIWKI*IKESRA
Trigger: AGCCCTACTCTCCTTGATGCAGATTTTCCAGATTCT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTAGAATCTGGAAAATCTaGATCAAGGAGAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIRIWKI*IKESRA
Trigger: AGCCCTACTCTCCTTGATGCAGATTTTCCAGATTCT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACTTGCAAGAGGAGCATaGTCTTTTGGTTTAGCAACT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLALARGA*SFGLAT
Trigger: AGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTTGCAAGAGGAGCATaGTCTTTTGGTTTAGCAACT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLARGA*SFGLAT
Trigger: AGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTTTTCTACTGGACTTaGAAGAGGAGCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVFYWT*KRSMLF
Trigger: AAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAAAGTTTTCGGTGGGTaGCATGTTGTTCTGATTATG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVKVFGG*HVVLIM
Trigger: CATAATCAGAACAACATGGCACCCACCGAAAACTTT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTCCAAAGACTAAATaGAGTCTTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTPKTK*SLECPV
Trigger: CACAGGACATTCAAGACTGCATTTAGTCTTTGGAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGGAATGAGGAACCATaGACACAATCAAGACTAATC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVWNEEP*TQSRLI
Trigger: GATTAGTCTTGATTGTGTGCATGGTTCCTCATTCCA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGAATTTAGACTGTGGTaGAGTGTACATGTAACATGG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVEFRLW*SVHVTW
Trigger: CCATGTTACATGTACACTGCACCACAGTCTAAATTC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACGGTCACTCATTAAGTaGTGGGGCACATTTTTACAG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQRSLIK*WGTFLQ
Trigger: CTGTAAAAATGTGCCCCAGCACTTAATGAGTGACCG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTCCCAAAGCCTTCCTaGATTGTTTCTACTTCATGT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFPKPS*IVSTSC
Trigger: ACATGAAGTAGAAACAATCCAGGAAGGCTTTGGGAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGCAGTAATCCCTCCATaGCTTGAGTTTATCACTTTG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIAVIPP*LEFITL
Trigger: CAAAGTGATAAACTCAAGCCATGGAGGGATTACTGC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGAAAGTATTCGCTGCTaGCAGCCAAGACGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAESIRC*QPRRFY
Trigger: ATAAAAACGTCTTGGCTGCCAGCAGCGAATACTTTC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATTATCAAAAGCATCTaGCTCACAGAAGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVIIKSI*LTEVKL
Trigger: CAGCTTGACTTCTGTGAGCCAGATGCTTTTGATAAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTGGTTTTGGGACATGTaGCTTATTGGTATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIWFWDM*LIGIGL
Trigger: AAGGCCAATACCAATAAGCCACATGTCCCAAAACCA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGGTTTTGGGACATGTaGCTTATTGGTATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRWFWDM*LIGIGL
Trigger: AAGGCCAATACCAATAAGCCACATGTCCCAAAACCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTGACCACTCACACCTaGTTTATCATCCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLTTHT*FIIHSF
Trigger: GAAGCTATGGATGATAAACCAGGTGTGAGTGGTCAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLLSML*FPEPDP
Trigger: TGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAACCTCCTTTTTGCTaGGAGTCTGCTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKEPPFC*ESAHVF
Trigger: AAAGACATGAGCAGACTCCCAGCAAAAAGGAGGTTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTAAATGTAAGCTCCTTTaGCTCGAGATCTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIKCKLL*LEISSS
Trigger: GGAACTTGAGATCTCGAGCCAAAGGAGCTTACATTT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAAATGTAAGCTCCTTTaGCTCGAGATCTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWKCKLL*LEISSS
Trigger: GGAACTTGAGATCTCGAGCCAAAGGAGCTTACATTT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAAATGTAAGCTCCTTTaGCTCGAGATCTCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRKCKLL*LEISSS
Trigger: GGAACTTGAGATCTCGAGCCAAAGGAGCTTACATTT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAAGAAAAGTTTTCGGTaGGTGCCATGTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVKKSFR*VPCCSD
Trigger: ATCAGAACAACATGGCACCCACCGAAAACTTTTCTT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTCACATCACCATTGTaGTCCAAAACGGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVTSPL*SKTGKE
Trigger: TTCTTTGCCCGTTTTGGACCACAATGGTGATGTGAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTGTGGTGACGATGTaGTTTACTTTGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFVVTM*FTLLGS
Trigger: TGAGCCCAACAAAGTAAACCACATCGTCACCACAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAGGGTGTCTGATTCTTaGGGCACAAACAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRVSDS*GTNSFS
Trigger: AGAAAAACTGTTTGTGCCCCAAGAATCAGACACCCT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAGGGTGTCTGATTCTTaGGGCACAAACAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRVSDS*GTNSFS
Trigger: AGAAAAACTGTTTGTGCCCCAAGAATCAGACACCCT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCAGGGTGTCTGATTCTTaGGGCACAAACAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIRVSDS*GTNSFS
Trigger: AGAAAAACTGTTTGTGCCCCAAGAATCAGACACCCT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTATCTTTCCTACCACTaGTATGGAATGTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECYLSYH*YGMLAI
Trigger: TATTGCCAACATTCCATACCAGTGGTAGGAAAGATA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCACTCATTAAGTGCTaGGGCACATTTTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISLIKC*GTFLQA
Trigger: TGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCACTCATTAAGTGCTaGGGCACATTTTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSLIKC*GTFLQA
Trigger: TGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTGAGTTTATCACTTTaGTCCTCGCACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLSLSL*SSHTNS
Trigger: GCTATTTGTGTGCGAGGATCAAAGTGATAAACTCAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTGAGTTTATCACTTTaGTCCTCGCACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLSLSL*SSHTNS
Trigger: GCTATTTGTGTGCGAGGATCAAAGTGATAAACTCAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAAATCCCTCCATGGCTTaGGTTTATCACTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQNPSMA*VYHFDP
Trigger: AGGATCAAAGTGATAAACTCAAGCCATGGAGGGATT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTTGTGAATAAACTCTaGAAGTATTCGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIFVNKL*KYSLLA
Trigger: TGCCAGCAGCGAATACTTTCAGAGTTTATTCACAAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTTGTGAATAAACTCTaGAAGTATTCGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRFVNKL*KYSLLA
Trigger: TGCCAGCAGCGAATACTTTCAGAGTTTATTCACAAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCACAGAAGTCAAGCTaGAATACAGTTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSQKSS*NTVCDS
Trigger: TGAGTCACAAACTGTATTTCAGCTTGACTTCTGTGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCACAGAAGTCAAGCTaGAATACAGTTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSQKSS*NTVCDS
Trigger: TGAGTCACAAACTGTATTTCAGCTTGACTTCTGTGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTGTTGGAAAGGGGGCTTaGGGTGTTTTAGAAACGATG +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILVGKGA*GVLETM
Trigger: CATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAAC...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGTGAAGACCTGCTGTTaGTCTAAAGATCTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQVKTCC*SKDLKA
Trigger: TGCCTTAAGATCTTTAGATCAACAGCAGGTCTTCAC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATGTGCGATTGGAAGTaGCTCCAGAGTCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKMCDWK*LQSRKL
Trigger: TAATTTTCGACTCTGGAGTCACTTCCAATCGCACAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTGTGTGTTTGTTCGTaGCTCCAAAGACTAAATGCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLCVCS*LQRLNA
Trigger: TGCATTTAGTCTTTGGAGTCACGAACAAACACACAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTGTGTGTTTGTTCGTaGCTCCAAAGACTAAATGCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLCVCS*LQRLNA
Trigger: TGCATTTAGTCTTTGGAGTCACGAACAAACACACAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGCTGTGCTAATTCTTaGGTGTCTGGGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSCANS*VSGIYV
Trigger: TACATAGATCCCAGACACTCAAGAATTAGCACAGCT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCTTGGAAAGCATGTTaGAACTGCAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSWKAC*NCSEVF
Trigger: AAACACCTCACTGCAGTTTCAACATGCTTTCCAAGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGTCTTCTTTTGAAGTaGCAGCTACCAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKCLLLK*QLPRWT
Trigger: TGTCCATCTTGGTAGCTGTCACTTCAAAAGAAGACA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAAACTGTCTTCTTTTaGAGTGACAGCTACCAAGAT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWETVFF*SDSYQD
Trigger: ATCTTGGTAGCTGTCACTTCAAAAGAAGACAGTTTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGCTCAAGAGACTTTaGATATACCACAGAACTATC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMLKRL*IYHRTI
Trigger: GATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCCAAAGATCCAGAATaGTCAAGAGACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSKDPE*SRDFAY
Trigger: ATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATTTTTGCTGGGAGTCTaGTCATGTCTTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRFLLGV*SCLFGH
Trigger: ATGACCAAAAAGACATGAGCAGACTCCCAGCAAAAA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTTTTGCTGGGAGTCTaGTCATGTCTTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIFLLGV*SCLFGH
Trigger: ATGACCAAAAAGACATGAGCAGACTCCCAGCAAAAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTTTGCTGGGAGTCTaGTCATGTCTTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFLLGV*SCLFGH
Trigger: ATGACCAAAAAGACATGAGCAGACTCCCAGCAAAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTGACACAGGAGACCCGTaGTCATTCACCTTTAACTTC +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILDTGDP*SFTFNF
Trigger: GAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTC...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGAATCTGGAAAATCTaGATCAAGGAGAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRIWKI*IKESRA
Trigger: AGCCCTACTCTCCTTGATGCAGATTTTCCAGATTCT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTCCTCTTGATGACTTaGTGTGCTTGGGAGCTACTC +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFLLMT*CAWELL
Trigger: GAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCTTATACTCACACTTaGTCTCGTGTTCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSYTHT*SRVLAS
Trigger: TGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATCTTATACTCACACTTaGTCTCGTGTTCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLASYTHT*SRVLAS
Trigger: TGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCTTATACTCACACTTaGTCTCGTGTTCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSYTHT*SRVLAS
Trigger: TGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAAAGTTTTCGGTGGGTaGCATGTTGTTCTGATTATG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRKVFGG*HVVLIM
Trigger: CATAATCAGAACAACATGGCACCCACCGAAAACTTT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAAAGTTTTCGGTGGGTaGCATGTTGTTCTGATTATG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWKVFGG*HVVLIM
Trigger: CATAATCAGAACAACATGGCACCCACCGAAAACTTT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACTCCAAAGACTAAATaGAGTCTTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTPKTK*SLECPV
Trigger: CACAGGACATTCAAGACTGCATTTAGTCTTTGGAGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGAATTTAGACTGTGGTaGAGTGTACATGTAACATGG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIEFRLW*SVHVTW
Trigger: CCATGTTACATGTACACTGCACCACAGTCTAAATTC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAATTTAGACTGTGGTaGAGTGTACATGTAACATGG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNREFRLW*SVHVTW
Trigger: CCATGTTACATGTACACTGCACCACAGTCTAAATTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAATTTAGACTGTGGTaGAGTGTACATGTAACATGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWEFRLW*SVHVTW
Trigger: CCATGTTACATGTACACTGCACCACAGTCTAAATTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGCAGTAATCCCTCCATaGCTTGAGTTTATCACTTTG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKAVIPP*LEFITL
Trigger: CAAAGTGATAAACTCAAGCCATGGAGGGATTACTGC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATTATCAAAAGCATCTaGCTCACAGAAGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRIIKSI*LTEVKL
Trigger: CAGCTTGACTTCTGTGAGCCAGATGCTTTTGATAAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGGTTCTATTGGTTTTaGGACATGTGGCTTATTGGT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRWFYWF*DMWLIG
Trigger: ACCAATAAGCCACATGTCCCAAAACCAATAGAACCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATGGTTCTATTGGTTTTaGGACATGTGGCTTATTGGT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAWFYWF*DMWLIG
Trigger: ACCAATAAGCCACATGTCCCAAAACCAATAGAACCA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGGTTCTATTGGTTTTaGGACATGTGGCTTATTGGT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWWFYWF*DMWLIG
Trigger: ACCAATAAGCCACATGTCCCAAAACCAATAGAACCA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACCGAAGATGATCCCTaGGAAGATTTCAAATCTATG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTEDDP*EDFKSM
Trigger: CATAGATTTGAAATCTTCCCAGGGATCATCTTCGGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAACCGAAGATGATCCCTaGGAAGATTTCAAATCTATG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRTEDDP*EDFKSM
Trigger: CATAGATTTGAAATCTTCCCAGGGATCATCTTCGGT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGCGTAGGGCTTTTCTaGGTTATGGTACATGTTAAC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSVGLF*VMVHVN
Trigger: GTTAACATGTACCATAACCCAGAAAAGCCCTACGCT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAAGAAAAGTTTTCGGTaGGTGCCATGTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWKKSFR*VPCCSD
Trigger: ATCAGAACAACATGGCACCCACCGAAAACTTTTCTT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTTGTGGTGACGATGTaGTTTACTTTGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFVVTM*FTLLGS
Trigger: TGAGCCCAACAAAGTAAACCACATCGTCACCACAAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACACGTGACAAATAAATaGTTTCACAGAGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAHVTNK*FHRAQK
Trigger: CTTCTGTGCTCTGTGAAACCATTTATTTGTCACGTG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGGGTGTCTGATTCTTaGGGCACAAACAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRVSDS*GTNSFS
Trigger: AGAAAAACTGTTTGTGCCCCAAGAATCAGACACCCT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTCTTGAATGTCCTGTaGCAAAGTTTACACATAAAC +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVLNVL*QSLHIN
Trigger: GTTTATGTGTAAACTTTGCCACAGGACATTCAAGAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTATTATACTGACACCATaGAATGAGGAACCATGCACA +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIIILTP*NEEPCT
Trigger: TGTGCATGGTTCCTCATTCCATGGTGTCAGTATAAT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCTGAATTTAGACTGTaGTGCAGTGTACATGTAACA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSEFRL*CSVHVT
Trigger: TGTTACATGTACACTGCACCACAGTCTAAATTCAGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACAATGGGACTACATATaGATTCAAACGGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAQWDYI*IQTVTH
Trigger: ATGAGTGACCGTTTGAATCCATATGTAGTCCCATTG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCACAGAAGTCAAGCTaGAATACAGTTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSQKSS*NTVCDS
Trigger: TGAGTCACAAACTGTATTTCAGCTTGACTTCTGTGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFPFGS*PLTPGL
Trigger: TAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAAGTTAACTTGTTCTaGAGAATCACTGAACACGTT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNREVNLF*RITEHV
Trigger: AACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGAAGTTAACTTGTTCTaGAGAATCACTGAACACGTT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWEVNLF*RITEHV
Trigger: AACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTTAAATGTGATTGCTaGAAGGGGTGGGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFKCDC*KGWGMV
Trigger: TACCATGCCCCACCCCTTTCAGCAATCACATTTAAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTGTGTGTTTGTTCGTaGCTCCAAAGACTAAATGCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLCVCS*LQRLNA
Trigger: TGCATTTAGTCTTTGGAGTCACGAACAAACACACAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAATGTCTATCACTACTaGAGCCCTTATAAACTGACT +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRNVYHY*SPYKLT
Trigger: AGTCAGTTTATAAGGGCTTCAGTAGTGATAGACATT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCATACATAGTATTCTTTaGAAAGCCCAAAACCCATGG +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIIHSIL*KAQNPW
Trigger: CCATGGGTTTTGGGCTTTTCAAAGAATACTATGTAT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATACATAGTATTCTTTaGAAAGCCCAAAACCCATGG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWIHSIL*KAQNPW
Trigger: CCATGGGTTTTGGGCTTTTCAAAGAATACTATGTAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCTTTTGAAACACATTaGACTTTGGATATCCTACTG +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPFETH*TLDILL
Trigger: CAGTAGGATATCCAAAGTTCAATGTGTTTCAAAAGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAAACTGTCTTCTTTTaGAGTGACAGCTACCAAGAT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKETVFF*SDSYQD
Trigger: ATCTTGGTAGCTGTCACTTCAAAAGAAGACAGTTTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTTGCAGAAACATCACTaGGACATCGTAAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHILQKHH*DIVNCQ
Trigger: TTGACAATTTACGATGTCTCAGTGATGTTTCTGCAA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGCTCAAGAGACTTTaGATATACCACAGAACTATC +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMLKRL*IYHRTI
Trigger: GATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCCAAAGATCCAGAATaGTCAAGAGACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSKDPE*SRDFAY
Trigger: ATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGGTTTTTCTCCTGGATaGATTTTTATATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVGFSPG*IFICCL
Trigger: TAAGCAGCATATAAAAATGCATCCAGGAGAAAAACC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCTTATACTCACACTTaGTCTCGTGTTCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSYTHT*SRVLAS
Trigger: TGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTTTACACCAAGTATTTaGCTACTGGCTGAGATAAAC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWFTPSI*LLAEIN
Trigger: GTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAATTATCAAAAGCATCTaGCTCACAGAAGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQIIKSI*LTEVKL
Trigger: CAGCTTGACTTCTGTGAGCCAGATGCTTTTGATAAT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATGGTTCTATTGGTTTTaGGACATGTGGCTTATTGGT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQWFYWF*DMWLIG
Trigger: ACCAATAAGCCACATGTCCCAAAACCAATAGAACCA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATTCAAATCAGAATCTaGAAAATCTGCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVIQIRI*KICIKE
Trigger: CTCCTTGATGCAGATTTTCCAGATTCTGATTTGAAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACACGTGACAAATAAATaGTTTCACAGAGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQHVTNK*FHRAQK
Trigger: CTTCTGTGCTCTGTGAAACCATTTATTTGTCACGTG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCACGTGACAAATAAATaGTTTCACAGAGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKHVTNK*FHRAQK
Trigger: CTTCTGTGCTCTGTGAAACCATTTATTTGTCACGTG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTCTTGAATGTCCTGTaGCAAAGTTTACACATAAAC +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVLNVL*QSLHIN
Trigger: GTTTATGTGTAAACTTTGCCACAGGACATTCAAGAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCTGAATTTAGACTGTaGTGCAGTGTACATGTAACA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSEFRL*CSVHVT
Trigger: TGTTACATGTACACTGCACCACAGTCTAAATTCAGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATTCCTACCACTGGTATaGAATGTTGGCAATAAGATT +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAFLPLV*NVGNKI
Trigger: AATCTTATTGCCAACATTCCATACCAGTGGTAGGAA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTATCTTTCCTACCACTaGTATGGAATGTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIYLSYH*YGMLAI
Trigger: TATTGCCAACATTCCATACCAGTGGTAGGAAAGATA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATATCTTTCCTACCACTaGTATGGAATGTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRYLSYH*YGMLAI
Trigger: TATTGCCAACATTCCATACCAGTGGTAGGAAAGATA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATCCTGCATACTTACATaGAATAAAGAGCTTTCTACA +
Preference number: 4 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVSCILT*NKELST
Trigger: TGTAGAAAGCTCTTTATTCCATGTAAGTATGCAGGA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTGTCGTCTTTTGTGGTaGCGATGTGGTTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILCRLLW*RCGLLC
Trigger: ACAAAGTAAACCACATCGTCACCACAAAAGACGACA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGAAGTTAACTTGTTCTaGAGAATCACTGAACACGTT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKEVNLF*RITEHV
Trigger: AACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTATGTGCGATTGGAAGTaGCTCCAGAGTCGAAAATTA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILMCDWK*LQSRKL
Trigger: TAATTTTCGACTCTGGAGTCACTTCCAATCGCACAT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATACATAGTATTCTTTaGAAAGCCCAAAACCCATGG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKIHSIL*KAQNPW
Trigger: CCATGGGTTTTGGGCTTTTCAAAGAATACTATGTAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACCTTTTGAAACACATTaGACTTTGGATATCCTACTG +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQPFETH*TLDILL
Trigger: CAGTAGGATATCCAAAGTTCAATGTGTTTCAAAAGG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCCTTTTGAAACACATTaGACTTTGGATATCCTACTG +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKPFETH*TLDILL
Trigger: CAGTAGGATATCCAAAGTTCAATGTGTTTCAAAAGG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTGTCTTCTTTTGAAGTaGCAGCTACCAAGATGGACA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILCLLLK*QLPRWT
Trigger: TGTCCATCTTGGTAGCTGTCACTTCAAAAGAAGACA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAATGCTCAAGAGACTTTaGATATACCACAGAACTATC +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQMLKRL*IYHRTI
Trigger: GATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCAT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATCCAAAGATCCAGAATaGTCAAGAGACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQSKDPE*SRDFAY
Trigger: ATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGGTTTTTCTCCTGGATaGATTTTTATATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAGFSPG*IFICCL
Trigger: TAAGCAGCATATAAAAATGCATCCAGGAGAAAAACC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR GCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGGTTTTTCTCCTGGATaGATTTTTATATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWGFSPG*IFICCL
Trigger: TAAGCAGCATATAAAAATGCATCCAGGAGAAAAACC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR GCA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTTACACCAAGTATTTaGCTACTGGCTGAGATAAAC +
Preference number: 4 (lower is better)
Translates to: INVPFQTRKPRTSHISPQFTPSI*LLAEIN
Trigger: GTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAAAAAGCAGGCATCCTaGATACTTACATGGAATAAA +
Preference number: 4 (lower is better)
Translates to: RMALPMILTIRPPTNSNRKKQAS*ILTWNK
Trigger: TTTATTCCATGTAAGTATGCAGGATGCCTGCTTTTT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTATTCAAATCAGAATCTaGAAAATCTGCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIIQIRI*KICIKE
Trigger: CTCCTTGATGCAGATTTTCCAGATTCTGATTTGAAT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATTCAAATCAGAATCTaGAAAATCTGCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWIQIRI*KICIKE
Trigger: CTCCTTGATGCAGATTTTCCAGATTCTGATTTGAAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTAGCGTAGGGCTTTTCTaGGTTATGGTACATGTTAAC +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILSVGLF*VMVHVN
Trigger: GTTAACATGTACCATAACCCAGAAAAGCCCTACGCT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTTGTGGTGACGATGTaGTTTACTTTGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFVVTM*FTLLGS
Trigger: TGAGCCCAACAAAGTAAACCACATCGTCACCACAAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTCTTGAATGTCCTGTaGCAAAGTTTACACATAAAC +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVLNVL*QSLHIN
Trigger: GTTTATGTGTAAACTTTGCCACAGGACATTCAAGAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTCCTACCACTGGTATaGAATGTTGGCAATAAGATT +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFLPLV*NVGNKI
Trigger: AATCTTATTGCCAACATTCCATACCAGTGGTAGGAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
3UTR CAA 72 bp AGCCCTTATAAACTGACTGTAGGGGACTTCCATAAATaGTTTTCATTTCCCAGGTCTTCCTTAGAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SPYKLTVGDFHK*FSFPRSSLEFN
Trigger: GTTAAACTCTAAGGAAGACCTGGGAAATGAAAACAATTTATGGAAGTCCCCTACAGTCAGTTTATAAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTTTTGCTGGGAGTCTaGTCATGTCTTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFLLGV*SCLFGH
Trigger: ATGACCAAAAAGACATGAGCAGACTCCCAGCAAAAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTAAAGTTTTCGGTGGGTaGCATGTTGTTCTGATTATG +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILKVFGG*HVVLIM
Trigger: CATAATCAGAACAACATGGCACCCACCGAAAACTTT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAAAAAGCAGGCATCCTaGATACTTACATGGAATAAA +
Preference number: 4 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKKKQAS*ILTWNK
Trigger: TTTATTCCATGTAAGTATGCAGGATGCCTGCTTTTT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTCCCAAAGCCTTCCTaGATTGTTTCTACTTCATGT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILFPKPS*IVSTSC
Trigger: ACATGAAGTAGAAACAATCCAGGAAGGCTTTGGGAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTAAGAAAAGTTTTCGGTaGGTGCCATGTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILKKSFR*VPCCSD
Trigger: ATCAGAACAACATGGCACCCACCGAAAACTTTTCTT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR TCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTGCAGAAACATCACTaGGACATCGTAAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILLQKHH*DIVNCQ
Trigger: TTGACAATTTACGATGTCTCAGTGATGTTTCTGCAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTATGCTCAAGAGACTTTaGATATACCACAGAACTATC +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILMLKRL*IYHRTI
Trigger: GATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCAT...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR GCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTCCAAAGATCCAGAATaGTCAAGAGACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILSKDPE*SRDFAY
Trigger: ATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CCA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTCTGAATTTAGACTGTaGTGCAGTGTACATGTAACA +
Preference number: 4 (lower is better)
Translates to: RPTCFTPSICLLAEINILSEFRL*CSVHVT
Trigger: TGTTACATGTACACTGCACCACAGTCTAAATTCAGA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS GCA 90 bp CCGGCCGAGCAGCAGGGCTCCTGGCCGGCGGAGGGTGCTATGCTCTaGGGGACCGCCGGGAAGTCCCAGACAAGGTCTGCGGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: PAEQQGSWPAEGAML*GTAGKSQTRSAGAR
Trigger: CCGAGCCCCCGCAGACCTTGTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 90 bp GGTCGCCGGCCGAGCAGCAGGGCTCCTGGCCGGCGGAGGGTGCTATaGTCTGCGGGACCGCCGGGAAGTCCCAGACAAGGTCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GRRPSSRAPGRRRVL*SAGPPGSPRQGLRG
Trigger: CCCCCGCAGACCTTGTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGGCGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS CCA 90 bp CTCCTCCAAGCGGGGAGACGGTCGCCGGCCGAGCAGCAGGGCTCCTaGCCGGCGGAGGGTGCTATGCTCTGCGGGACCGCCGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LLQAGRRSPAEQQGS*PAEGAMLCGTAGKS
Trigger: GGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGGCGACCGTCTCCCCGCTTGGAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 90 bp GAGACGGTCGCCGGCCGAGCAGCAGGGCTCCTGGCCGGCGGAGGGTaGTATGCTCTGCGGGACCGCCGGGAAGTCCCAGACAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: ETVAGRAAGLLAGGG*YALRDRREVPDKVC
Trigger: GCAGACCTTGTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGGCGACCGTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 90 bp GCCCCTTTCCGCTCACACTCGGCTCGCGCGCGCCGCAGCCGCCGCTaGCGCTGTGATTCCATCCATCTTGAATTTGACGTCATCCCACAC +
Preference number: 5 (lower is better)
Translates to: APFRSHSARARRSRR*RCDSIHLEFDVIPH
Trigger: GTGTGGGATGACGTCAAATTCAAGATGGATGGAATCACAGCGGCAGCGGCGGCTGCGGCGCGCGCGAGCCGAGTGTGAGCGGAAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS TCA 90 bp CACACTTGCTCTCGTGTTCTTGCTTCAGCTCGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGACGGCCGCGTTCCGGCACAGCCGCT +
Preference number: 5 (lower is better)
Translates to: HTCSRVLASARARKT*GCSKGRRPRSGTAA
Trigger: AGCGGCTGTGCCGGAACGCGGCCGTCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 90 bp CAGAGCACAGAAGCTCCTGGTGACGCTCCAGCTGCTTATGCACCGTaGACATCTTCCCACACTTCTCGCAGGGCCACAGGCTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QSTEAPGDAPAAYAP*TSSHTSRRATGWLL
Trigger: AAGAAGCCAGCCTGTGGCCCTGCGAGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGCTGGAGCGTCACCAGGAGCTTCTGTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 90 bp TTCTTTGCTAGGACCCGCTTCTTTGGGGGCTGTGCTGGCCTCGGGTaGCTCTTCTTCAGCCTCCTCCACAGGCTCCTCTTTGACTTGGAT +
Preference number: 5 (lower is better)
Translates to: FFARTRFFGGCAGLG*LFFSLLHRLLFDLD
Trigger: ATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAGCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 90 bp AGCTCCTTTGGCTCGAGATCTCAAGTTCCTCTTGATGACTTGCTGTaGTTGGGAGCTACTCTGTCCCTGAAAACCAGGCTTGCCGCGCCT +
Preference number: 5 (lower is better)
Translates to: SSFGSRSQVPLDDLL*LGATLSLKTRLAAP
Trigger: AGGCGCGGCAAGCCTGGTTTTCAGGGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATCTCGAGCCAAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS TCA 90 bp GTCATCTTCTGTTTTCAGAGACAGGTCTCTTGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGCCGCATCTCCCACAGTGACGCGGAT +
Preference number: 5 (lower is better)
Translates to: VIFCFQRQVSCDRRR*GSCCCCRISHSDAD
Trigger: ATCCGCGTCACTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTCTGAAAACAGAAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCCAGAGGCTGGATCTaGGGCAGTGGTGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSRGWI*GSGGGG
Trigger: ACCGCCACCACCACTGCCCAAGATCCAGCCTCTGGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACTAGGACCCGCTTCTTaGGGGGCTGTGCTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLGPAS*GAVLAS
Trigger: CGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTAGGACCCGCTTCTTaGGGGGCTGTGCTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLGPAS*GAVLAS
Trigger: CGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS TCA 90 bp GACGATGTGGTTTACTTTGTTGGGCTCAGGCTGGGATTGGGGCCTTaGAGAACCAGTCACATCACCATTGTGGTCCAAAACGGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: DDVVYFVGLRLGLGP*RTSHITIVVQNGQR
Trigger: TCTTTGCCCGTTTTGGACCACAATGGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 90 bp TGTGGGAACAGGGCACACCTCAGATTCCTTATGTGCCGATTCCTCTaGAGCCTGAGACATGTGCGATTGGAAGTGACTCCAGAGTCGAAA +
Preference number: 5 (lower is better)
Translates to: CGNRAHLRFLMCRFL*SLRHVRLEVTPESK
Trigger: TTTCGACTCTGGAGTCACTTCCAATCGCACATGTCTCAGGCTTCAGAGGAATCGGCACATAAGGAATCTGAGGTGTGCCCTGTTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTAGGACCCGCTTCTTaGGGGGCTGTGCTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLGPAS*GAVLAS
Trigger: CGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCAGAGGCTGGATCTaGGGCAGTGGTGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISRGWI*GSGGGG
Trigger: ACCGCCACCACCACTGCCCAAGATCCAGCCTCTGGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCCAGAGGCTGGATCTaGGGCAGTGGTGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSRGWI*GSGGGG
Trigger: ACCGCCACCACCACTGCCCAAGATCCAGCCTCTGGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp CGTCTGAGGAGACTCTTAACAAGTGGGCCACTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCACTGGATGGGATCACTAAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: RLRRLLTSGPLLSML*FPEPDPLDGITKPN
Trigger: GTTAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTCCTCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp TTTGTGGTGACGATGTGGTTTACTTTGTTGGGCTCAGGCTGGGATTaGGGCCTTGAAGAACCAGTCACATCACCATTGTGGTCCAAAACG +
Preference number: 5 (lower is better)
Translates to: FVVTMWFTLLGSGWD*GLEEPVTSPLWSKT
Trigger: CGTTTTGGACCACAATGGTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGTCACCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTGGAGAGGGAGAGTTaGTGGGAACAGGGCACACCT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVERES*WEQGTP
Trigger: AGGTGTGCCCTGTTCCCACAAACTCTCCCTCTCCAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCCAGAGGCTGGATCTaGGGCAGTGGTGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSRGWI*GSGGGG
Trigger: ACCGCCACCACCACTGCCCAAGATCCAGCCTCTGGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 90 bp TTCTATTGGTTTTGGGACATGTGGCTTATTGGTATTGGCCTTGACTaGAATGCTAGGAGAGGGCCGGGAAGTATGGCTTACATCGGGTTG +
Preference number: 5 (lower is better)
Translates to: FYWFWDMWLIGIGLD*NARRGPGSMAYIGL
Trigger: CAACCCGATGTAAGCCATACTTCCCGGCCCTCTCCTAGCATTGCAGTCAAGGCCAATACCAATAAGCCACATGTCCCAAAACCAATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCATGAGGCAGCTGCTGTaGTTGCCGCATCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIMRQLL*LPHLPQ
Trigger: CTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCAT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGAGGCAGCTGCTGTaGTTGCCGCATCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMRQLL*LPHLPQ
Trigger: CTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTATGAGGCAGCTGCTGTaGTTGCCGCATCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIMRQLL*LPHLPQ
Trigger: CTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCAT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGCTGGGATTGGGGCCTaGAAGAACCAGTCACATCAC +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVAGIGA*KNQSHH
Trigger: GTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVHRLAS*LGPASL
Trigger: CAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS TCA 90 bp CGTGGTCTCTTCAAAGCCAGCTCTAGAGCTTTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTATCATCCATAGCTTCTCTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: RGLFKASSRAFPFGS*PLTPGLSSIASLSC
Trigger: GCAAGACAGAGAAGCTATGGATGATAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAAAGCTCTAGAGCTGGCTTTGAAGAGACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 90 bp GGGCTTGAGCCTTCCTCAAAATTATCTTCTGACACAGGAGACCCGTaGTCATTCACCTTTAACTTCTTAAACGGCAATCTTCGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GLEPSSKLSSDTGDP*SFTFNFLNGNLRSA
Trigger: AGCGGACCGAAGATTGCCGTTTAAGAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAGGAAGGCTCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp TCTGAAGAATCACTGAACACGTTGTCGTCTTTTGTGGTGACGATGTaGTTTACTTTGTTGGGCTCAGGCTGGGATTGGGGCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SEESLNTLSSFVVTM*FTLLGSGWDWGLEE
Trigger: TTCTTCAAGGCCCCAATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGTCACCACAAAAGACGACAACGTGTTCAGTGATTCTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATGAGGCAGCTGCTGTaGTTGCCGCATCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKMRQLL*LPHLPQ
Trigger: CTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCTTGGAACCTCCTTTTaGCTGGGAGTCTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECLGTSF*LGVCSC
Trigger: ACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACAATCTTCGGTCCGCTaGGAACCTCCTTTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVQSSVR*EPPFCW
Trigger: CCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACTTGCTCTCGTGTTCTaGCTTCAGCTCGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: LREQTHFIPVSQQLLSLALALVF*LQLGRE
Trigger: TTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGCTGGGATTGGGGCCTaGAAGAACCAGTCACATCAC +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWAGIGA*KNQSHH
Trigger: GTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGCTGGGATTGGGGCCTaGAAGAACCAGTCACATCAC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRAGIGA*KNQSHH
Trigger: GTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIHRLAS*LGPASL
Trigger: CAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRHRLAS*LGPASL
Trigger: CAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTGGAGAGGGAGAGTTaGTGGGAACAGGGCACACCT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVERES*WEQGTP
Trigger: AGGTGTGCCCTGTTCCCACAAACTCTCCCTCTCCAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp CATCACTGGACACCGAAGATGATCCCTGGGAAGATTTCAAATCTATaGAAGGTGAATAGACAGGAACCTGGCTATCCATCGACAATGACC +
Preference number: 5 (lower is better)
Translates to: HHWTPKMIPGKISNL*KVNRQEPGYPSTMT
Trigger: GGTCATTGTCGATGGATAGCCAGGTTCCTGTCTATTCACCTTCCATAGATTTGAAATCTTCCCAGGGATCATCTTCGGTGTCCAGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTCACACAGCTGTCCTTaGAGACGCTCCTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWSHSCP*RRSSFR
Trigger: CCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCACACAGCTGTCCTTaGAGACGCTCCTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSHSCP*RRSSFR
Trigger: CCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTATAGCCAAGTTCTaGCACAGCAGCAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTIAKF*HSSKAA
Trigger: AGCAGCCTTGCTGCTGTGCAAGAACTTGGCTATAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGGGACATGTGGCTTATaGGTATTGGCCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVGTCGL*VLALTA
Trigger: TGCAGTCAAGGCCAATACCAATAAGCCACATGTCCC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCACTCCTGTCAATGCTTaGGTTTCCAGAACCAGATCC +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECTPVNA*VSRTRS
Trigger: GGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACTTGCTCTCGTGTTCTaGCTTCAGCTCGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLALVF*LQLGRE
Trigger: TTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTTGCTCTCGTGTTCTaGCTTCAGCTCGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLALVF*LQLGRE
Trigger: TTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATGCTGAAAGAGGACTaGAAGGTGCGCATGCACTCG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWMLKED*KVRMHS
Trigger: CGAGTGCATGCGCACCTTCAAGTCCTCTTTCAGCAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGCTGAAAGAGGACTaGAAGGTGCGCATGCACTCG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMLKED*KVRMHS
Trigger: CGAGTGCATGCGCACCTTCAAGTCCTCTTTCAGCAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCAGTCACATCACCATaGTGGTCCAAAACGGGCAAA +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPVTSP*WSKTGK
Trigger: TTTGCCCGTTTTGGACCACAATGGTGATGTGACTGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGCTGGGATTGGGGCCTaGAAGAACCAGTCACATCAC +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQAGIGA*KNQSHH
Trigger: GTGATGTGACTGGTTCTTCAAGGCCCCAATCCCAGC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGTGGTTTACTTTGTaGGGCTCAGGCTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMWFTL*GSGWDW
Trigger: CCAATCCCAGCCTGAGCCCAACAAAGTAAACCACAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACGATGTGGTTTACTTaGTTGGGCTCAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTMWFT*LGSGWD
Trigger: ATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCGAATCACTGAACACGTaGTCGTCTTTTGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECESLNT*SSFVVT
Trigger: CGTCACCACAAAAGACGACAACGTGTTCAGTGATTC...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTGAGACATGTGCGATaGGAAGTGACTCCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLRHVR*EVTPES
Trigger: CGACTCTGGAGTCACTTCCAATCGCACATGTCTCAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACTGAGACATGTGCGATaGGAAGTGACTCCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLRHVR*EVTPES
Trigger: CGACTCTGGAGTCACTTCCAATCGCACATGTCTCAG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACTGAGACATGTGCGATaGGAAGTGACTCCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: LREQTHFIPVSQQLLSLALRHVR*EVTPES
Trigger: CGACTCTGGAGTCACTTCCAATCGCACATGTCTCAG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCATCCATCTTGAATTaGACGTCATCCCACACCAGG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPSILN*TSSHTR
Trigger: CCTGGTGTGGGATGACGTCAAATTCAAGATGGATGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGATCCAGCAAGACTGTTaGTGGCTGGTGGCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWIQQDC*WLVAVY
Trigger: GTACACAGCCACCAGCCACAAACAGTCTTGCTGGAT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398499.5
CDS GCA 90 bp CTGTGTACACCGAATCCTCAAAAACTTTTGATTTCTCTGCTCTTCTaGTGTCAGATAAGGCGAGCTTTGTTGCCGGGTGTACTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LCTPNPQKLLISLLF*CQIRRALLPGVLSP
Trigger: AGGAGAAAGTACACCCGGCAACAAAGCTCGCCTTATCTGACAGCAGAAGAGCAGAGAAATCAAAAGTTTTTGAGGATTCGGTGTACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398497.2
CDS CCA 90 bp GTGGGCCACTCCTGTCAATGCTTTGGTTTCCAGAACCAGATCCACTaGATGGGATCACTAAGCCTAACTTTGAATAGTACAACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: VGHSCQCFGFQNQIH*MGSLSLTLNSTTSF
Trigger: GAAACTTGTTGTACTATTCAAAGTTAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp TGCTCATTCACCTTTAACTTCTTAAACGGCAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGGAGTCTGCTCATGTCTTTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CSFTFNFLNGNLRSA*NLLFAGSLLMSFWS
Trigger: TGACCAAAAAGACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTGCCGTTTAAGAAGTTAAAGGTGAATGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp TCGAAAATTAGTGCGAAAAGCTTTGTTGCACACGTGACAAATAAATaGTTTCACAGAGCACAGAAGCTCCTGGTGACGCTCCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SKISAKSFVAHVTNK*FHRAQKLLVTLQLL
Trigger: AAGCAGCTGGAGCGTCACCAGGAGCTTCTGTGCTCTGTGAAACCATTTATTTGTCACGTGTGCAACAAAGCTTTTCGCACTAATTTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCACACAGCTGTCCTTaGAGACGCTCCTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSHSCP*RRSSFR
Trigger: CCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACTATAGCCAAGTTCTaGCACAGCAGCAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTIAKF*HSSKAA
Trigger: AGCAGCCTTGCTGCTGTGCAAGAACTTGGCTATAGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAACTATAGCCAAGTTCTaGCACAGCAGCAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRTIAKF*HSSKAA
Trigger: AGCAGCCTTGCTGCTGTGCAAGAACTTGGCTATAGT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACGTTGGAAAGGGGGCTaGAGGTGTTTTAGAAACGAT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRWKGG*RCFRND
Trigger: ATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAACG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCAGGGACATGTGGCTTATaGGTATTGGCCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAGTCGL*VLALTA
Trigger: TGCAGTCAAGGCCAATACCAATAAGCCACATGTCCC...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTCCTGTCAATGCTTaGGTTTCCAGAACCAGATCC +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTPVNA*VSRTRS
Trigger: GGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACTTGGAACCTCCTTTTaGCTGGGAGTCTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRLGTSF*LGVCSC
Trigger: ACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCTTGGAACCTCCTTTTaGCTGGGAGTCTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWLGTSF*LGVCSC
Trigger: ACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCAATCTTCGGTCCGCTaGGAACCTCCTTTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKQSSVR*EPPFCW
Trigger: CCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCTTCACTATGCCGTGTaGGGTCTGACAGTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLHYAV*GLTVCP
Trigger: TGGACACACTGTCAGACCCAACACGGCATAGTGAAG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGATCTCAAGTTCCTCTaGATGACTTGCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVDLKFL*MTCCAW
Trigger: CCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAATGCTGAAAGAGGACTaGAAGGTGCGCATGCACTCG +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQMLKED*KVRMHS
Trigger: CGAGTGCATGCGCACCTTCAAGTCCTCTTTCAGCAT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGATGCTGAAAGAGGACTaGAAGGTGCGCATGCACTCG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKMLKED*KVRMHS
Trigger: CGAGTGCATGCGCACCTTCAAGTCCTCTTTCAGCAT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCCAGTCACATCACCATaGTGGTCCAAAACGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIPVTSP*WSKTGK
Trigger: TTTGCCCGTTTTGGACCACAATGGTGATGTGACTGG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCCAGTCACATCACCATaGTGGTCCAAAACGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWPVTSP*WSKTGK
Trigger: TTTGCCCGTTTTGGACCACAATGGTGATGTGACTGG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCATGTGGTTTACTTTGTaGGGCTCAGGCTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIMWFTL*GSGWDW
Trigger: CCAATCCCAGCCTGAGCCCAACAAAGTAAACCACAT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTATGTGGTTTACTTTGTaGGGCTCAGGCTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIMWFTL*GSGWDW
Trigger: CCAATCCCAGCCTGAGCCCAACAAAGTAAACCACAT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGTGGTTTACTTTGTaGGGCTCAGGCTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMWFTL*GSGWDW
Trigger: CCAATCCCAGCCTGAGCCCAACAAAGTAAACCACAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTACGATGTGGTTTACTTaGTTGGGCTCAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSITMWFT*LGSGWD
Trigger: ATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS TCA 90 bp TTCGGGAAGACAAGAGGAATCTTCCGAGTCGAAGTTAACTTGTTCTaGAGAATCACTGAACACGTTGTCGTCTTTTGTGGTGACGATGTG +
Preference number: 5 (lower is better)
Translates to: FGKTRGIFRVEVNLF*RITEHVVVFCGDDV
Trigger: CACATCGTCACCACAAAAGACGACAACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTCGACTCGGAAGATTCCTCTTGTCTTCCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CCA 90 bp ATGACTTCTGAGATAAAGCACACAACACATTCCCTGGTGCATCACTaGACACCGAAGATGATCCCTGGGAAGATTTCAAATCTATGGAAG +
Preference number: 5 (lower is better)
Translates to: MTSEIKHTTHSLVHH*TPKMIPGKISNLWK
Trigger: CTTCCATAGATTTGAAATCTTCCCAGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGAATGTGTTGTGTGCTTTATCTCAGAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 90 bp ATCACAACTGCTGACGATCACGAGATAATCCAGCAAGACTGTTTGTaGCTGGTGGCTGTGTACACCGAATCCTCAAAAACTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: ITTADDHEIIQQDCL*LVAVYTESSKTFDF
Trigger: GAAATCAAAAGTTTTTGAGGATTCGGTGTACACAGCCACCAGCCACAAACAGTCTTGCTGGATTATCTCGTGATCGTCAGCAGTTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398497.2
ENST00000398499.5
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTATGAGCTCGGAACTTTaGGTCTCCAACAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIMSSEL*VSNNQQ
Trigger: CTGCTGATTGTTGGAGACCAAAAGTTCCGAGCTCAT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAACTATAGCCAAGTTCTaGCACAGCAGCAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQTIAKF*HSSKAA
Trigger: AGCAGCCTTGCTGCTGTGCAAGAACTTGGCTATAGT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACGTTGGAAAGGGGGCTaGAGGTGTTTTAGAAACGAT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRWKGG*RCFRND
Trigger: ATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAACG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATGTGGCTTATTGGTATaGGCCTTGACTGCAATGCTA +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVCGLLV*ALTAML
Trigger: TAGCATTGCAGTCAAGGCCAATACCAATAAGCCACA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGGGACATGTGGCTTATaGGTATTGGCCTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKGTCGL*VLALTA
Trigger: TGCAGTCAAGGCCAATACCAATAAGCCACATGTCCC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTTCCTCTTGATGACTaGCTGTGCTTGGGAGCTACT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVPLDD*LCLGAT
Trigger: AGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGATCTCAAGTTCCTCTaGATGACTTGCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRDLKFL*MTCCAW
Trigger: CCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAACCAGTCACATCACCATaGTGGTCCAAAACGGGCAAA +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQPVTSP*WSKTGK
Trigger: TTTGCCCGTTTTGGACCACAATGGTGATGTGACTGG...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGAATCACTGAACACGTaGTCGTCTTTTGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRESLNT*SSFVVT
Trigger: CGTCACCACAAAAGACGACAACGTGTTCAGTGATTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGAATCACTGAACACGTaGTCGTCTTTTGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIESLNT*SSFVVT
Trigger: CGTCACCACAAAAGACGACAACGTGTTCAGTGATTC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTGGATTTTCAGTTGCTaGGAAAGACTAAGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECWIFSC*ERLRSS
Trigger: CGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCACAGGCTCCTCTTaGACTTGGATTTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHISTGSS*TWIFSC
Trigger: GCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTCCACAGGCTCCTCTTaGACTTGGATTTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSISTGSS*TWIFSC
Trigger: GCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATCCACAGGCTCCTCTTaGACTTGGATTTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRSTGSS*TWIFSC
Trigger: GCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTCACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RPTCFTPSICLLAEINILHRLAS*LGPASL
Trigger: CAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTG...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCAGACTAAATGCAGTCTaGAATGTCCTGTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECRLNAV*NVLWQS
Trigger: ACTTTGCCACAGGACATTCAAGACTGCATTTAGTCT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS GCA 90 bp ATTACAGAGGCGGCACTGGTAAACCTCCTTGTTTTCTACTGGACTTaGAAGAGGAGCATGCTCTTTTGGTTTAGCAACTTTATTTACTCC +
Preference number: 5 (lower is better)
Translates to: ITEAALVNLLVFYWT*KRSMLFWFSNFIYS
Trigger: GGAGTAAATAAAGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACAAGGAGGTTTACCAGTGCCGCCTCTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CCA 90 bp CTTAGCATTACAGAGGCGGCACTGGTAAACCTCCTTGTTTTCTACTaGACTTGCAAGAGGAGCATGCTCTTTTGGTTTAGCAACTTTATT +
Preference number: 5 (lower is better)
Translates to: LSITEAALVNLLVFY*TCKRSMLFWFSNFI
Trigger: AATAAAGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACAAGGAGGTTTACCAGTGCCGCCTCTGTAATGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTCACACAGCTGTCCTTaGAGACGCTCCTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: RPTCFTPSICLLAEINILSHSCP*RRSSFR
Trigger: CCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCGTTGGAAAGGGGGCTaGAGGTGTTTTAGAAACGAT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRWKGG*RCFRND
Trigger: ATCGTTTCTAAAACACCTCAAGCCCCCTTTCCAACG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCGCTTCGTTTCTACTTaGACAAACAATGACACTTCT +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECRFVST*TNNDTS
Trigger: AGAAGTGTCATTGTTTGTCAAAGTAGAAACGAAGCG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCACTAACAGTTTTTCCTaGCGCTTCGTTTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECTNSFS*RFVSTL
Trigger: CAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGT...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTTATTGGTATTGGCCTaGACTGCAATGCTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSILLVLA*TAMLGE
Trigger: CTCTCCTAGCATTGCAGTCAAGGCCAATACCAATAA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTGTGGCTTATTGGTATaGGCCTTGACTGCAATGCTA +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHICGLLV*ALTAML
Trigger: TAGCATTGCAGTCAAGGCCAATACCAATAAGCCACA...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGTGGCTTATTGGTATaGGCCTTGACTGCAATGCTA +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRCGLLV*ALTAML
Trigger: TAGCATTGCAGTCAAGGCCAATACCAATAAGCCACA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGTGGTTCTATTGGTTTaGGGACATGTGGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIVVLLV*GHVAYW
Trigger: CCAATAAGCCACATGTCCCAAAACCAATAGAACCAC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTGGTTCTATTGGTTTaGGGACATGTGGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVVLLV*GHVAYW
Trigger: CCAATAAGCCACATGTCCCAAAACCAATAGAACCAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGTGGTTCTATTGGTTTaGGGACATGTGGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRVVLLV*GHVAYW
Trigger: CCAATAAGCCACATGTCCCAAAACCAATAGAACCAC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATATGAAGTGGTTCTATaGGTTTTGGGACATGTGGCT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVYEVVL*VLGHVA
Trigger: AGCCACATGTCCCAAAACCAATAGAACCACTTCATA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAACTCCTGTCAATGCTTaGGTTTCCAGAACCAGATCC +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQTPVNA*VSRTRS
Trigger: GGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTCAATCTTCGGTCCGCTaGGAACCTCCTTTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RPTCFTPSICLLAEINILQSSVR*EPPFCW
Trigger: CCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTG...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGTTTTCTACTGGACTaGCAAGAGGAGCATGCTCTT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRCFLLD*QEEHAL
Trigger: AAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTGTTTTCTACTGGACTaGCAAGAGGAGCATGCTCTT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWCFLLD*QEEHAL
Trigger: AAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVFLYSH*LSCSCF
Trigger: GAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGACTTGGATTTTCAGTaGCTTGGAAAGACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVDLDFQ*LGKTKV
Trigger: GACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTAGGCTCCTCTTTGACTaGGATTTTCAGTTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIRLLFD*DFQLLG
Trigger: TCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCT...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAGGCTCCTCTTTGACTaGGATTTTCAGTTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRRLLFD*DFQLLG
Trigger: TCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTCCACAGGCTCCTCTTaGACTTGGATTTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKSTGSS*TWIFSC
Trigger: GCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAAGACTAAATGCAGTCTaGAATGTCCTGTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRLNAV*NVLWQS
Trigger: ACTTTGCCACAGGACATTCAAGACTGCATTTAGTCT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATTTCACAATTCAGGTaGAAATCTGGGGACTGCCTC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRISQFR*KSGDCL
Trigger: GAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGTGATTCCATCCATCTaGAATTTGACGTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRVIPSI*NLTSSH
Trigger: GTGGGATGACGTCAAATTCAAGATGGATGGAATCAC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACGCTTCGTTTCTACTTaGACAAACAATGACACTTCT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVRFVST*TNNDTS
Trigger: AGAAGTGTCATTGTTTGTCAAAGTAGAAACGAAGCG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACTAACAGTTTTTCCTaGCGCTTCGTTTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVTNSFS*RFVSTL
Trigger: CAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTATTGGTATTGGCCTaGACTGCAATGCTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLLVLA*TAMLGE
Trigger: CTCTCCTAGCATTGCAGTCAAGGCCAATACCAATAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGGTGGTTCTATTGGTTTaGGGACATGTGGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKVVLLV*GHVAYW
Trigger: CCAATAAGCCACATGTCCCAAAACCAATAGAACCAC...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCATATGAAGTGGTTCTATaGGTTTTGGGACATGTGGCT +
Preference number: 5 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAYEVVL*VLGHVA
Trigger: AGCCACATGTCCCAAAACCAATAGAACCACTTCATA...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTATGAAGTGGTTCTATaGGTTTTGGGACATGTGGCT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWYEVVL*VLGHVA
Trigger: AGCCACATGTCCCAAAACCAATAGAACCACTTCATA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATTGCATTTAAATTTTTaGTTTGGTCTCGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVLHLNF*FGLVPS
Trigger: GGAGGGGACGAGACCAAACAAAAAATTTAAATGCAA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATATATGCTGCTTAAATaGAGAGAGAAAGCGGTACGC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRYMLLK*REKAVR
Trigger: GCGTACCGCTTTCTCTCTCAATTTAAGCAGCATATA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTGTTTTCTACTGGACTaGCAAGAGGAGCATGCTCTT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKCFLLD*QEEHAL
Trigger: AAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTTGGATTTTCAGTTGCTaGGAAAGACTAAGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIWIFSC*ERLRSS
Trigger: CGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCA...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATGGATTTTCAGTTGCTaGGAAAGACTAAGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRWIFSC*ERLRSS
Trigger: CGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCGACTTGGATTTTCAGTaGCTTGGAAAGACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIDLDFQ*LGKTKV
Trigger: GACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTC...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAGACTTGGATTTTCAGTaGCTTGGAAAGACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRDLDFQ*LGKTKV
Trigger: GACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTC...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGAGGCTCCTCTTTGACTaGGATTTTCAGTTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKRLLFD*DFQLLG
Trigger: TCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCT...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAGACTAAATGCAGTCTaGAATGTCCTGTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRLNAV*NVLWQS
Trigger: ACTTTGCCACAGGACATTCAAGACTGCATTTAGTCT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCCCACTTCTTCCTATTTaGGACTTAAGAACATGGTTA +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECPLLPI*DLRTWL
Trigger: TAACCATGTTCTTAAGTCCAAAATAGGAAGAAGTGG...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CTCCGTGAACAGACACATTTTATTCCTGTTTCACAGCAGCTACTCTCATTAGCACACTGGTATGGAATGTaGGCAATAAGATTGATGGGT +
Preference number: 5 (lower is better)
Translates to: LREQTHFIPVSQQLLSLAHWYGM*AIRLMG
Trigger: ACCCATCAATCTTATTGCCAACATTCCATACCAGTG...TGCTAATGAGAGTAGCTGCTGTGAAACAGGAATAAAATGTGTCTGTTCACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCACTGGTATGGAATGTaGGCAATAAGATTGATGGGT +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIHWYGM*AIRLMG
Trigger: ACCCATCAATCTTATTGCCAACATTCCATACCAGTG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp CTCCTCCAGAATCTAAACACCAATTTTGTCTTCTCCCCAGTCACATGGGAATGCTCACTAGCTAATGAGTaGCAACAATTTAAGACCAAC +
Preference number: 5 (lower is better)
Translates to: LLQNLNTNFVFSPVTWECSLANE*QQFKTN
Trigger: GTTGGTCTTAAATTGTTGCAACTCATTAGCTAGTGA...GCATTCCCATGTGACTGGGGAGAAGACAAAATTGGTGTTTAGATTCTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGCGCTTCGTTTCTACTTaGACAAACAATGACACTTCT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWRFVST*TNNDTS
Trigger: AGAAGTGTCATTGTTTGTCAAAGTAGAAACGAAGCG...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GGCAAGGCTATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCCGCTTCGTTTCTACTTaGACAAACAATGACACTTCT +
Preference number: 5 (lower is better)
Translates to: GKAINVPFQTRKPRTSHIRFVST*TNNDTS
Trigger: AGAAGTGTCATTGTTTGTCAAAGTAGAAACGAAGCG...GATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTATAGCCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGACTAACAGTTTTTCCTaGCGCTTCGTTTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWTNSFS*RFVSTL
Trigger: CAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTATACATCGGGTTGATTTaGACTAACAGTTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVYIGLI*TNSFSL
Trigger: CAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTA...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAATGGCTTACATCGGGTaGATTTTGACTAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVMAYIG*ILTNSF
Trigger: AAAACTGTTAGTCAAAATCAACCCGATGTAAGCCAT...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAGTTTCTATCTTCACCTaGACCATTTCCTTTGTTAGT +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVVSIFT*TISFVS
Trigger: ACTAACAAAGGAAATGGTCAAGGTGAAGATAGAAAC...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTATATGCTGCTTAAATaGAGAGAGAAAGCGGTACGC +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKYMLLK*REKAVR
Trigger: GCGTACCGCTTTCTCTCTCAATTTAAGCAGCATATA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKFLYSH*LSCSCF
Trigger: GAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQFLYSH*LSCSCF
Trigger: GAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAGACTTGGATTTTCAGTaGCTTGGAAAGACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQDLDFQ*LGKTKV
Trigger: GACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTC...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp GTGCAGTCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTACCACTTCTTCCTATTTaGGACTTAAGAACATGGTTA +
Preference number: 5 (lower is better)
Translates to: VQSFKCWSEFRLWCSVHVPLLPI*DLRTWL
Trigger: TAACCATGTTCTTAAGTCCAAAATAGGAAGAAGTGG...TACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGCACTGGTATGGAATGTaGGCAATAAGATTGATGGGT +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKHWYGM*AIRLMG
Trigger: ACCCATCAATCTTATTGCCAACATTCCATACCAGTG...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAACTAACAGTTTTTCCTaGCGCTTCGTTTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQTNSFS*RFVSTL
Trigger: CAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGATACATCGGGTTGATTTaGACTAACAGTTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRYIGLI*TNSFSL
Trigger: CAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTA...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACATCGGGTTGATTTaGACTAACAGTTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWYIGLI*TNSFSL
Trigger: CAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTA...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAATGGCTTACATCGGGTaGATTTTGACTAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRMAYIG*ILTNSF
Trigger: AAAACTGTTAGTCAAAATCAACCCGATGTAAGCCAT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGAATGCTCAAGAGACTTaGCATATACCACAGAACTAT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWNAQET*HIPQNY
Trigger: ATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATT...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGAAATGCTCAAGAGACTTaGCATATACCACAGAACTAT +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRNAQET*HIPQNY
Trigger: ATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATT...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTGTTTCTATCTTCACCTaGACCATTTCCTTTGTTAGT +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIVSIFT*TISFVS
Trigger: ACTAACAAAGGAAATGGTCAAGGTGAAGATAGAAAC...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp TCCTTCAAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGGTTTCTATCTTCACCTaGACCATTTCCTTTGTTAGT +
Preference number: 5 (lower is better)
Translates to: SFKCWSEFRLWCSVHVTWVSIFT*TISFVS
Trigger: ACTAACAAAGGAAATGGTCAAGGTGAAGATAGAAAC...CCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAATTGCATTTAAATTTTTaGTTTGGTCTCGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQLHLNF*FGLVPS
Trigger: GGAGGGGACGAGACCAAACAAAAAATTTAAATGCAA...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310826.10
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTTGCATTTAAATTTTTaGTTTGGTCTCGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKLHLNF*FGLVPS
Trigger: GGAGGGGACGAGACCAAACAAAAAATTTAAATGCAA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS-3UTR CAA 90 bp CACTCATTAAGTGCTGGGGCACATTTTTACAGGCAAGGCTATAAACGTTCCATTCCACTTCTTCCTATTTaGGACTTAAGAACATGGTTA +
Preference number: 5 (lower is better)
Translates to: HSLSAGAHFYRQGYKRSIPLLPI*DLRTWL
Trigger: TAACCATGTTCTTAAGTCCAAAATAGGAAGAAGTGG...AATGGAACGTTTATAGCCTTGCCTGTAAAAATGTGCCCCAGCACTTAATGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGAATGGCCTTGCCCATGATTTTAACCATCAGACCCCCAACAAATTCTAACAGACCACTTCTTCCTATTTaGGACTTAAGAACATGGTTA +
Preference number: 5 (lower is better)
Translates to: RMALPMILTIRPPTNSNRPLLPI*DLRTWL
Trigger: TAACCATGTTCTTAAGTCCAAAATAGGAAGAAGTGG...TCTGTTAGAATTTGTTGGGGGTCTGATGGTTAAAATCATGGGCAAGGCCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 90 bp CTTTTCACCAAACTGATTCTATTAGGATCATCCAAAGATCCAGAATaGTCAAGAGACTTTGCATATACCACAGAACTATCTTTCGGCCAA +
Preference number: 5 (lower is better)
Translates to: LFTKLILLGSSKDPE*SRDFAYTTELSFGQ
Trigger: TTGGCCGAAAGATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGATGATCCTAATAGAATCAGTTTGGTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp AAATGCTGGTCTGAATTTAGACTGTGGTGCAGTGTACATGTAACATGGTACAAGTACATCGGGTTGATTTaGACTAACAGTTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KCWSEFRLWCSVHVTWYKYIGLI*TNSFSL
Trigger: CAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTA...CTTGTACCATGTTACATGTACACTGCACCACAGTCTAAATTCAGACCAGCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS-3UTR CAA 90 bp ATAAACGTTCCATTCCAAACCAGAAAACCAAGAACATCACACATCTCCCCACAAAATGCTCAAGAGACTTaGCATATACCACAGAACTAT +
Preference number: 5 (lower is better)
Translates to: INVPFQTRKPRTSHISPQNAQET*HIPQNY
Trigger: ATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATT...TTGTGGGGAGATGTGTGATGTTCTTGGTTTTCTGGTTTGGAATGGAACGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: RPTCFTPSICLLAEINILFLYSH*LSCSCF
Trigger: GAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS CCA 90 bp GTATTCTTTGCTTTTTCTATTAGACCTTGTGACTTTAATCACTACTaGACGATGATTCCCAAATCTGTATCTCTGTTTAGACTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: VFFAFSIRPCDFNHY*TMIPKSVSLFRLLR
Trigger: CCTCAAGAGTCTAAACAGAGATACAGATTTGGGAATCATCGTCCAGTAGTGATTAAAGTCACAAGGTCTAATAGAAAAAGCAAAGAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425521.1
CDS-3UTR CAA 90 bp AGACCAACTTGTTTTACACCAAGTATTTGCCTACTGGCTGAGATAAACATTCTTTCACTAGCTAATGAGTaGCAACAATTTAAGACCAAC +
Preference number: 5 (lower is better)
Translates to: RPTCFTPSICLLAEINILSLANE*QQFKTN
Trigger: GTTGGTCTTAAATTGTTGCAACTCATTAGCTAGTGA...AAGAATGTTTATCTCAGCCAGTAGGCAAATACTTGGTGTAAAACAAGTTGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310826.10
ENST00000398505.7
CDS CCA 90 bp AATATTTTGTTTCTTATGACACATTTCACAATTCAGGTTGAAATCTaGGGACTGCCTCCCATAGGTAAAAAGTGTTGGTCTTTCAATTGT +
Preference number: 5 (lower is better)
Translates to: NILFLMTHFTIQVEI*GLPPIGKKCWSFNC
Trigger: ACAATTGAAAGACCAACACTTTTTACCTATGGGAGGCAGTCCCCAGATTTCAACCTGAATTGTGAAATGTGTCATAAGAAACAAAATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 72 bp GCGGGGAGACGGTCGCCGGCCGAGCAGCAGGGCTCCTaGCCGGCGGAGGGTGCTATGCTCTGCGGGACCGCC +
Preference number: 6 (lower is better)
Translates to: AGRRSPAEQQGS*PAEGAMLCGTA
Trigger: GGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGGCGACCGTCTCCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 72 bp GCCGGCCGAGCAGCAGGGCTCCTGGCCGGCGGAGGGTaGTATGCTCTGCGGGACCGCCGGGAAGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: AGRAAGLLAGGG*YALRDRREVPD
Trigger: GTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGGCCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 72 bp CAGCAGGGCTCCTGGCCGGCGGAGGGTGCTATGCTCTaGGGGACCGCCGGGAAGTCCCAGACAAGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: QQGSWPAEGAML*GTAGKSQTRSA
Trigger: CGCAGACCTTGTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS GCA 72 bp CCGAGCAGCAGGGCTCCTGGCCGGCGGAGGGTGCTATaGTCTGCGGGACCGCCGGGAAGTCCCAGACAAGGT +
Preference number: 6 (lower is better)
Translates to: PSSRAPGRRRVL*SAGPPGSPRQG
Trigger: ACCTTGTCTGGGACTTCCCGGCGGTCCCGCAGAGCATAGCACCCTCCGCCGGCCAGGAGCCCTGCTGCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449949.5
CDS CAA 90 bp GTGAACATCTTCCCACACTTCTCGCAGGGCCACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTGGGGGCTGTGCTGGCCTCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: VNIFPHFSQGHRLAS*LGPASLGAVLASGA
Trigger: GGCACCCGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTGGCCCTGCGAGAAGTGTGGGAAGATGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp GGCCACAGGCTGGCTTCTTTGCTAGGACCCGCTTCTTaGGGGGCTGTGCTGGCCTCGGGTGCCTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GHRLASLLGPAS*GAVLASGASSS
Trigger: TGAAGAAGAGGCACCCGAGGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TTCCCACACTTCTCGCAGGGCCACAGGCTGGCTTCTTaGCTAGGACCCGCTTCTTTGGGGGCTGTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: FPHFSQGHRLAS*LGPASLGAVLA
Trigger: GGCCAGCACAGCCCCCAAAGAAGCGGGTCCTAGCAAAGAAGCCAGCCTGTGGCCCTGCGAGAAGTGTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS TCA 72 bp TCTCGTGTTCTTGCTTCAGCTCGGGCGAGAAAAACCTaGGGCTGCAGTAAGGGCAGACGGCCGCGTTCCGGC +
Preference number: 6 (lower is better)
Translates to: SRVLASARARKT*GCSKGRRPRSG
Trigger: GCCGGAACGCGGCCGTCTGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 72 bp GAAGCTCCTGGTGACGCTCCAGCTGCTTATGCACCGTaGACATCTTCCCACACTTCTCGCAGGGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: EAPGDAPAAYAP*TSSHTSRRATG
Trigger: GCCTGTGGCCCTGCGAGAAGTGTGGGAAGATGTTCACGGTGCATAAGCAGCTGGAGCGTCACCAGGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 72 bp ACGGCCGCGTTCCGGCACAGCCGCTCGTGGCTTCCTTaGTCTAGGAGAGAAGAGAGCTTAGCATTACAGAGG +
Preference number: 6 (lower is better)
Translates to: TAAFRHSRSWLP*SRREESLALQR
Trigger: CCTCTGTAATGCTAAGCTCTCTTCTCTCCTAGAGCAAGGAAGCCACGAGCGGCTGTGCCGGAACGCGGCCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CAA 72 bp GCCGCAGCCGCCGCTGCCGCTGTGATTCCATCCATCTaGAATTTGACGTCATCCCACACCAGGGATGAGGTC +
Preference number: 6 (lower is better)
Translates to: AAAAAAAVIPSI*NLTSSHTRDEV
Trigger: GACCTCATCCCTGGTGTGGGATGACGTCAAATTCAAGATGGATGGAATCACAGCGGCAGCGGCGGCTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398511.3
CDS TCA 72 bp TCAGTCACAGGGGAAGCTCCCTCCCTGTCTGTTGACTaGGAAGCACTAAAGGACCTGAGGCGATGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: SVTGEAPSLSVD*EALKDLRRCGC
Trigger: ACAACCGCATCGCCTCAGGTCCTTTAGTGCTTCTCAGTCAACAGACAGGGAGGGAGCTTCCCCTGTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 90 bp CTCGAGGCAGGTCAGCTTCTTATACTCACACTTGCTCTCGTGTTCTaGCTTCAGCTCGGGCGAGAAAAACCTGAGGCTGCAGTAAGGGCA +
Preference number: 6 (lower is better)
Translates to: LEAGQLLILTLALVF*LQLGREKPEAAVRA
Trigger: TGCCCTTACTGCAGCCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGACCTGCCTCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 90 bp AAGGTGCGCATGCACTCGAGGCAGGTCAGCTTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTCAGCTCGGGCGAGAAAAACCTGAGG +
Preference number: 6 (lower is better)
Translates to: KVRMHSRQVSFLYSH*LSCSCFSSGEKNLR
Trigger: CCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGACCTGCCTCGAGTGCATGCGCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 72 bp TGTTTTCAGAGACAGGTCTCTTGTGACCGACGAAGATaGGGCAGCTGCTGTTGTTGCCGCATCTCCCACAGT +
Preference number: 6 (lower is better)
Translates to: CFQRQVSCDRRR*GSCCCCRISHS
Trigger: ACTGTGGGAGATGCGGCAACAACAGCAGCTGCCTCATCTTCGTCGGTCACAAGAGACCTGTCTCTGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 90 bp CTCGGGTGCCTCTTCTTCAGCCTCCTCCACAGGCTCCTCTTTGACTaGGATTTTCAGTTGCTTGGAAAGACTAAGGTCTTCGGGAAGACA +
Preference number: 6 (lower is better)
Translates to: LGCLFFSLLHRLLFD*DFQLLGKTKVFGKT
Trigger: TGTCTTCCCGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAAGAAGAGGCACCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 72 bp AGGGCACACCTCAGATTCCTTATGTGCCGATTCCTCTaGAGCCTGAGACATGTGCGATTGGAAGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: RAHLRFLMCRFL*SLRHVRLEVTP
Trigger: TGGAGTCACTTCCAATCGCACATGTCTCAGGCTTCAGAGGAATCGGCACATAAGGAATCTGAGGTGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 72 bp GGCTCGAGATCTCAAGTTCCTCTTGATGACTTGCTGTaGTTGGGAGCTACTCTGTCCCTGAAAACCAGGCTT +
Preference number: 6 (lower is better)
Translates to: GSRSQVPLDDLL*LGATLSLKTRL
Trigger: AAGCCTGGTTTTCAGGGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATCTCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS GCA 72 bp GTCAGCTTCTTATACTCACACTTGCTCTCGTGTTCTTaGTTCAGCTCGGGCGAGAAAAACCTGAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: VSFLYSHLLSCS*FSSGEKNLRLQ
Trigger: CTGCAGCCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS GCA 72 bp TGCACTCGAGGCAGGTCAGCTTCTTATACTCACACTTaGTCTCGTGTTCTTGCTTCAGCTCGGGCGAGAAAA +
Preference number: 6 (lower is better)
Translates to: CTRGRSASYTHT*SRVLASARARK
Trigger: TTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGACCTGCCTCGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CCA 72 bp TCACTGAACACGTTGTCGTCTTTTGTGGTGACGATGTaGTTTACTTTGTTGGGCTCAGGCTGGGATTGGGGC +
Preference number: 6 (lower is better)
Translates to: SLNTLSSFVVTM*FTLLGSGWDWG
Trigger: GCCCCAATCCCAGCCTGAGCCCAACAAAGTAAACCACATCGTCACCACAAAAGACGACAACGTGTTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 72 bp GGTCAGCTTCTTATACTCACACTTGCTCTCGTGTTCTaGCTTCAGCTCGGGCGAGAAAAACCTGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GQLLILTLALVF*LQLGREKPEAA
Trigger: TGCAGCCTCAGGTTTTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 72 bp ATGCACTCGAGGCAGGTCAGCTTCTTATACTCACACTaGCTCTCGTGTTCTTGCTTCAGCTCGGGCGAGAAA +
Preference number: 6 (lower is better)
Translates to: MHSRQVSFLYSH*LSCSCFSSGEK
Trigger: TTTCTCGCCCGAGCTGAAGCAAGAACACGAGAGCAAGTGTGAGTATAAGAAGCTGACCTGCCTCGAGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 90 bp AATGTAAGCTCCTTTGGCTCGAGATCTCAAGTTCCTCTTGATGACTaGCTGTGCTTGGGAGCTACTCTGTCCCTGAAAACCAGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: NVSSFGSRSQVPLDD*LCLGATLSLKTRLA
Trigger: GGCAAGCCTGGTTTTCAGGGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATCTCGAGCCAAAGGAGCTTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS TCA 72 bp CTCCAACAATCAGCAGCACATCACACAGCTGTCCTTTaGGACGCTCCTCATTCAGGGCACTTAGGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: LQQSAAHHTAVL*DAPHSGHLGEK
Trigger: TTTCTCTCCTAAGTGCCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGATGTGCTGCTGATTGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310826.10
ENST00000398497.2
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000425521.1
ENST00000449949.5
CDS TCA 72 bp GGCAAAGAAAAGTTTTCGGTGGGTGCCATGTTGTTCTaGTTATGGACTTCAACCTGGTGCCGCCAGATGCTG +
Preference number: 6 (lower is better)
Translates to: GKEKFSVGAMLF*LWTSTWCRQML
Trigger: CAGCATCTGGCGGCACCAGGTTGAAGTCCATAATCAGAACAACATGGCACCCACCGAAAACTTTTCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS GCA 72 bp TTTTGGGACATGTGGCTTATTGGTATTGGCCTTGACTaGAATGCTAGGAGAGGGCCGGGAAGTATGGCTTAC +
Preference number: 6 (lower is better)
Translates to: FWDMWLIGIGLD*NARRGPGSMAY
Trigger: GTAAGCCATACTTCCCGGCCCTCTCCTAGCATTGCAGTCAAGGCCAATACCAATAAGCCACATGTCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 72 bp CGGCAATCTTCGGTCCGCTTGGAACCTCCTTTTTGCTaGGAGTCTGCTCATGTCTTTTTGGTCATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: RQSSVRLEPPFC*ESAHVFLVIFC
Trigger: ACAGAAGATGACCAAAAAGACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TCTCCAACAATCAGCAGCACATCACACAGCTGTCCTTaGAGACGCTCCTCATTCAGGGCACTTAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: SPTISSTSHSCP*RRSSFRALRRE
Trigger: TTCTCTCCTAAGTGCCCTGAATGAGGAGCGTCTCAAAGGACAGCTGTGTGATGTGCTGCTGATTGTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310826.10
ENST00000398497.2
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000425521.1
ENST00000449949.5
CDS CAA 72 bp GAGACTCTTAACAAGTGGGCCACTCCTGTCAATGCTTaGGTTTCCAGAACCAGATCCACTGGATGGGATCAC +
Preference number: 6 (lower is better)
Translates to: ETLNKWATPVNA*VSRTRSTGWDH
Trigger: GTGATCCCATCCAGTGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TCCTTTGGCTCGAGATCTCAAGTTCCTCTTGATGACTaGCTGTGCTTGGGAGCTACTCTGTCCCTGAAAACC +
Preference number: 6 (lower is better)
Translates to: SFGSRSQVPLDD*LCLGATLSLKT
Trigger: GGTTTTCAGGGACAGAGTAGCTCCCAAGCACAGCAAGTCATCAAGAGGAACTTGAGATCTCGAGCCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CAA 72 bp GGTGCCTCTTCTTCAGCCTCCTCCACAGGCTCCTCTTaGACTTGGATTTTCAGTTGCTTGGAAAGACTAAGG +
Preference number: 6 (lower is better)
Translates to: GASSSASSTGSS*TWIFSCLERLR
Trigger: CCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAAGAAGAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 90 bp TCAGCCTCCTCCACAGGCTCCTCTTTGACTTGGATTTTCAGTTGCTaGGAAAGACTAAGGTCTTCGGGAAGACAAGAGGAATCTTCCGAG +
Preference number: 6 (lower is better)
Translates to: SASSTGSSLTWIFSC*ERLRSSGRQEESSE
Trigger: CTCGGAAGATTCCTCTTGTCTTCCCGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 72 bp CTATGCCGTGTTGGGTCTGACAGTGTGTCCACACTTTaGAGTTGGTGTGAAACCTCTTGTGACAGATGTCAC +
Preference number: 6 (lower is better)
Translates to: LCRVGSDSVSTL*SWCETSCDRCH
Trigger: GTGACATCTGTCACAAGAGGTTTCACACCAACTTCAAAGTGTGGACACACTGTCAGACCCAACACGGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CCA 72 bp AGACTCTTAACAAGTGGGCCACTCCTGTCAATGCTTTaGTTTCCAGAACCAGATCCACTGGATGGGATCACT +
Preference number: 6 (lower is better)
Translates to: RLLTSGPLLSML*FPEPDPLDGIT
Trigger: AGTGATCCCATCCAGTGGATCTGGTTCTGGAAACCAAAGCATTGACAGGAGTGGCCCACTTGTTAAGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 72 bp ACAGAGGCGGCACTGGTAAACCTCCTTGTTTTCTACTaGACTTGCAAGAGGAGCATGCTCTTTTGGTTTAGC +
Preference number: 6 (lower is better)
Translates to: TEAALVNLLVFY*TCKRSMLFWFS
Trigger: GCTAAACCAAAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACAAGGAGGTTTACCAGTGCCGCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CAA 72 bp GCTAGGAGAGGGCCGGGAAGTATGGCTTACATCGGGTaGATTTTGACTAACAGTTTTTCCTTGCGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: ARRGPGSMAYIG*ILTNSFSLRFV
Trigger: AACGAAGCGCAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTAAGCCATACTTCCCGGCCCTCTCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp ACTGCTGACGATCACGAGATAATCCAGCAAGACTGTTaGTGGCTGGTGGCTGTGTACACCGAATCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: TADDHEIIQQDC*WLVAVYTESSK
Trigger: TTTTGAGGATTCGGTGTACACAGCCACCAGCCACAAACAGTCTTGCTGGATTATCTCGTGATCGTCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398497.2
ENST00000398499.5
CDS CAA 90 bp CACTACTGGACGATGATTCCCAAATCTGTATCTCTGTTTAGACTCTaGAGGCTCCAGCCTCTCAGGTACCTACTGAACGGTTCCATCACA +
Preference number: 6 (lower is better)
Translates to: HYWTMIPKSVSLFRL*RLQPLRYLLNGSIT
Trigger: TGTGATGGAACCGTTCAGTAGGTACCTGAGAGGCTGGAGCCTCAAGAGTCTAAACAGAGATACAGATTTGGGAATCATCGTCCAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425521.1
CDS CAA 90 bp GACTGCAATGCTAGGAGAGGGCCGGGAAGTATGGCTTACATCGGGTaGATTTTGACTAACAGTTTTTCCTTGCGCTTCGTTTCTACTTTG +
Preference number: 6 (lower is better)
Translates to: DCNARRGPGSMAYIG*ILTNSFSLRFVSTL
Trigger: CAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTAAGCCATACTTCCCGGCCCTCTCCTAGCATTGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 90 bp TTCTTCAGCCTCCTCCACAGGCTCCTCTTTGACTTGGATTTTCAGTaGCTTGGAAAGACTAAGGTCTTCGGGAAGACAAGAGGAATCTTC +
Preference number: 6 (lower is better)
Translates to: FFSLLHRLLFDLDFQ*LGKTKVFGKTRGIF
Trigger: GAAGATTCCTCTTGTCTTCCCGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CCA 72 bp ACCTTTAACTTCTTAAACGGCAATCTTCGGTCCGCTTaGAACCTCCTTTTTGCTGGGAGTCTGCTCATGTCT +
Preference number: 6 (lower is better)
Translates to: TFNFLNGNLRSA*NLLFAGSLLMS
Trigger: AGACATGAGCAGACTCCCAGCAAAAAGGAGGTTCCAAGCGGACCGAAGATTGCCGTTTAAGAAGTTAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp CTCTTCTTCAGCCTCCTCCACAGGCTCCTCTTTGACTaGGATTTTCAGTTGCTTGGAAAGACTAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LFFSLLHRLLFD*DFQLLGKTKVF
Trigger: GAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCTGAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 72 bp ACGATGATTCCCAAATCTGTATCTCTGTTTAGACTCTaGAGGCTCCAGCCTCTCAGGTACCTACTGAACGGT +
Preference number: 6 (lower is better)
Translates to: TMIPKSVSLFRL*RLQPLRYLLNG
Trigger: ACCGTTCAGTAGGTACCTGAGAGGCTGGAGCCTCAAGAGTCTAAACAGAGATACAGATTTGGGAATCATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425521.1
CDS GCA 72 bp GCGGCACTGGTAAACCTCCTTGTTTTCTACTGGACTTaGAAGAGGAGCATGCTCTTTTGGTTTAGCAACTTT +
Preference number: 6 (lower is better)
Translates to: AALVNLLVFYWT*KRSMLFWFSNF
Trigger: AAAGTTGCTAAACCAAAAGAGCATGCTCCTCTTGCAAGTCCAGTAGAAAACAAGGAGGTTTACCAGTGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398511.3
CDS CCA 72 bp GAGATAAAGCACACAACACATTCCCTGGTGCATCACTaGACACCGAAGATGATCCCTGGGAAGATTTCAAAT +
Preference number: 6 (lower is better)
Translates to: EIKHTTHSLVHH*TPKMIPGKISN
Trigger: ATTTGAAATCTTCCCAGGGATCATCTTCGGTGTCCAGTGATGCACCAGGGAATGTGTTGTGTGCTTTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TCCACAGGCTCCTCTTTGACTTGGATTTTCAGTTGCTaGGAAAGACTAAGGTCTTCGGGAAGACAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: STGSSLTWIFSC*ERLRSSGRQEE
Trigger: TTCCTCTTGTCTTCCCGAAGACCTTAGTCTTTCCAAGCAACTGAAAATCCAAGTCAAAGAGGAGCCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CAA 90 bp AATGCTAGGAGAGGGCCGGGAAGTATGGCTTACATCGGGTTGATTTaGACTAACAGTTTTTCCTTGCGCTTCGTTTCTACTTTGACAAAC +
Preference number: 6 (lower is better)
Translates to: NARRGPGSMAYIGLI*TNSFSLRFVSTLTN
Trigger: GTTTGTCAAAGTAGAAACGAAGCGCAAGGAAAAACTGTTAGTCAAAATCAACCCGATGTAAGCCATACTTCCCGGCCCTCTCCTAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS TCA 72 bp TTCAAAGCCAGCTCTAGAGCTTTTCCTTTTGGAAGCTaGCCACTCACACCTGGTTTATCATCCATAGCTTCT +
Preference number: 6 (lower is better)
Translates to: FKASSRAFPFGS*PLTPGLSSIAS
Trigger: AGAAGCTATGGATGATAAACCAGGTGTGAGTGGTCAGCTTCCAAAAGGAAAAGCTCTAGAGCTGGCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 72 bp CTCACACCTGGTTTATCATCCATAGCTTCTCTGTCTTaGAGAGGCTTTGAAGGCAACACTGCATTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: LTPGLSSIASLS*RGFEGNTAFLF
Trigger: GAAAAGAAATGCAGTGTTGCCTTCAAAGCCTCTGCAAGACAGAGAAGCTATGGATGATAAACCAGGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 90 bp TCTTCCGAGTCGAAGTTAACTTGTTCTGAAGAATCACTGAACACGTaGTCGTCTTTTGTGGTGACGATGTGGTTTACTTTGTTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: SSESKLTCSEESLNT*SSFVVTMWFTLLGS
Trigger: TGAGCCCAACAAAGTAAACCACATCGTCACCACAAAAGACGACAACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTCGACTCGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS CCA 72 bp TCCTGTCAATGCTTTGGTTTCCAGAACCAGATCCACTaGATGGGATCACTAAGCCTAACTTTGAATAGTACA +
Preference number: 6 (lower is better)
Translates to: SCQCFGFQNQIH*MGSLSLTLNST
Trigger: TGTACTATTCAAAGTTAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTGGAAACCAAAGCATTGACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 72 bp GAAATCTGGGGACTGCCTCCCATAGGTAAAAAGTGTTaGTCTTTCAATTGTGTGTTTGTTCGTGACTCCAAA +
Preference number: 6 (lower is better)
Translates to: EIWGLPPIGKKC*SFNCVFVRDSK
Trigger: TTTGGAGTCACGAACAAACACACAATTGAAAGACCAACACTTTTTACCTATGGGAGGCAGTCCCCAGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS TCA 72 bp ACAAGAGGAATCTTCCGAGTCGAAGTTAACTTGTTCTaGAGAATCACTGAACACGTTGTCGTCTTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: TRGIFRVEVNLF*RITEHVVVFCG
Trigger: ACCACAAAAGACGACAACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTCGACTCGGAAGATTCCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS TCA 72 bp AGTCGAAAATTAGTGCGAAAAGCTTTGTTGCACACGTaGCAAATAAATGGTTTCACAGAGCACAGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SRKLVRKALLHT*QINGFTEHRSS
Trigger: GGAGCTTCTGTGCTCTGTGAAACCATTTATTTGTCACGTGTGCAACAAAGCTTTTCGCACTAATTTTCGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 72 bp AGGATCATCCAAAGATCCAGAATGCTCAAGAGACTTTaGATATACCACAGAACTATCTTTCGGCCAACTCTT +
Preference number: 6 (lower is better)
Translates to: RIIQRSRMLKRL*IYHRTIFRPTL
Trigger: AAGAGTTGGCCGAAAGATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGATGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS GCA 72 bp CCTTCCTCAAAATTATCTTCTGACACAGGAGACCCGTaGTCATTCACCTTTAACTTCTTAAACGGCAATCTT +
Preference number: 6 (lower is better)
Translates to: PSSKLSSDTGDP*SFTFNFLNGNL
Trigger: AAGATTGCCGTTTAAGAAGTTAAAGGTGAATGAGCACGGGTCTCCTGTGTCAGAAGATAATTTTGAGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CCA 72 bp CAAATTATGAAGTGGTTCTATTGGTTTTGGGACATGTaGCTTATTGGTATTGGCCTTGACTGCAATGCTAGG +
Preference number: 6 (lower is better)
Translates to: QIMKWFYWFWDM*LIGIGLDCNAR
Trigger: CCTAGCATTGCAGTCAAGGCCAATACCAATAAGCCACATGTCCCAAAACCAATAGAACCACTTCATAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 90 bp GGTTTCCAGAACCAGATCCACTGGATGGGATCACTAAGCCTAACTTaGAATAGTACAACAAGTTTCTATCTTCACCTTGACCATTTCCTT +
Preference number: 6 (lower is better)
Translates to: GFQNQIHWMGSLSLT*NSTTSFYLHLDHFL
Trigger: AAGGAAATGGTCAAGGTGAAGATAGAAACTTGTTGTACTATTCAAAGTTAGGCTTAGTGATCCCATCCAGTGGATCTGGTTCTGGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp AACCAGATCCACTGGATGGGATCACTAAGCCTAACTTaGAATAGTACAACAAGTTTCTATCTTCACCTTGAC +
Preference number: 6 (lower is better)
Translates to: NQIHWMGSLSLT*NSTTSFYLHLD
Trigger: GTCAAGGTGAAGATAGAAACTTGTTGTACTATTCAAAGTTAGGCTTAGTGATCCCATCCAGTGGATCTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TCGAAGTTAACTTGTTCTGAAGAATCACTGAACACGTaGTCGTCTTTTGTGGTGACGATGTGGTTTACTTTG +
Preference number: 6 (lower is better)
Translates to: SKLTCSEESLNT*SSFVVTMWFTL
Trigger: CAAAGTAAACCACATCGTCACCACAAAAGACGACAACGTGTTCAGTGATTCTTCAGAACAAGTTAACTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
ENST00000465968.5
CDS GCA 72 bp AAACTGATTCTATTAGGATCATCCAAAGATCCAGAATaGTCAAGAGACTTTGCATATACCACAGAACTATCT +
Preference number: 6 (lower is better)
Translates to: KLILLGSSKDPE*SRDFAYTTELS
Trigger: AGATAGTTCTGTGGTATATGCAAAGTCTCTTGAGCATTCTGGATCTTTGGATGATCCTAATAGAATCAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3
CDS CAA 72 bp TCTTTTCAGTTAATGACAAATTATGAAGTGGTTCTATaGGTTTTGGGACATGTGGCTTATTGGTATTGGCCT +
Preference number: 6 (lower is better)
Translates to: SFQLMTNYEVVL*VLGHVAYWYWP
Trigger: AGGCCAATACCAATAAGCCACATGTCCCAAAACCAATAGAACCACTTCATAATTTGTCATTAACTGAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310826.10
ENST00000398499.5
ENST00000398505.7
ENST00000398511.3