RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB14 (Homo sapiens)

Ensembl gene IDs: ENSG00000198081

Ensembl transcript IDs: ENST00000357006.8, ENST00000400143.7, ENST00000582135.5, ENST00000582388.5, ENST00000585253.1, ENST00000614697.4, ENST00000615385.4, ENST00000651870.1

Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATaGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTC +
Preference number: 1 (lower is better)
Translates to: FYSSYHRSTHKSQLV*TGTAPNKRNLRAWL
Trigger: GAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR TCA 90 bp TCCATACGTTTCCACAAAAATATTGTAACTGGCATTCACTCATTATaGTCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGTGTCCCT +
Preference number: 1 (lower is better)
Translates to: SIRFHKNIVTGIHSL*STSSQSPLSRQSVP
Trigger: AGGGACACTTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTGTGGAAACGTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR CCA 90 bp CCAGTGAGTACAATGTTCCATACGTTTCCACAAAAATATTGTAACTaGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTC +
Preference number: 1 (lower is better)
Translates to: PVSTMFHTFPQKYCN*HSLIMIHVISVSTF
Trigger: GAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTGTGGAAACGTATGGAACATTGTACTCACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACCCCCACCATCCCGGTaGGTTTGCTTGGCCTTTAGG +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVPPPSR*VCLAFR
Trigger: CCTAAAGGCCAAGCAAACCCACCGGGATGGTGGGGG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACCCGGTGGGTTTGCTTaGCCTTTAGGATGTGTGACT +
Preference number: 2 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQPGGFA*PLGCVT
Trigger: AGTCACACATCCTAAAGGCCAAGCAAACCCACCGGG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACCATCCCGGTGGGTTTaGTTGGCCTTTAGGATGTGT +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVPSRWV*LAFRMC
Trigger: ACACATCCTAAAGGCCAAGCAAACCCACCGGGATGG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACCCGGTGGGTTTGCTTaGCCTTTAGGATGTGTGACT +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVPGGFA*PLGCVT
Trigger: AGTCACACATCCTAAAGGCCAAGCAAACCCACCGGG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCATTCACTCATTATaGTCCACGTCATCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGIHSL*STSSQS
Trigger: AGACTGAGATGACGTGGATCATAATGAGTGAATGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGAGAGAGGTGCTTACTaGGCAACATTAATACTAGAC +
Preference number: 2 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQERGAY*ATLILD
Trigger: GTCTAGTATTAATGTTGCCCAGTAAGCACCTCTCTC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCATTCACTCATTATaGTCCACGTCATCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGIHSL*STSSQS
Trigger: AGACTGAGATGACGTGGATCATAATGAGTGAATGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACAGGGCAATCAAGATTaGGGAAGAACACTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVQGNQD*GRTLQQ
Trigger: TTGCTGAAGTGTTCTTCCTCAATCTTGATTGCCCTG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAAAAAAGGGAGAGAGGTaGTTACTGGGCAACATTAAT +
Preference number: 2 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQKKGER*LLGNIN
Trigger: ATTAATGTTGCCCAGTAAGCACCTCTCTCCCTTTTT...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTTGTGCAGTGTTCTTaGTCAACCACTCACCAATTT +
Preference number: 2 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQFVQCS*STTHQF
Trigger: AAATTGGTGAGTGGTTGACCAAGAACACTGCACAAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAAAAAAGGGAGAGAGGTaGTTACTGGGCAACATTAAT +
Preference number: 2 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVKKGER*LLGNIN
Trigger: ATTAATGTTGCCCAGTAAGCACCTCTCTCCCTTTTT...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATCCCGGTGGGTTTGCTaGGCCTTTAGGATGTGTGAC +
Preference number: 3 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQSRWVC*AFRMCD
Trigger: GTCACACATCCTAAAGGCCAAGCAAACCCACCGGGA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CAA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATCCCGGTGGGTTTGCTaGGCCTTTAGGATGTGTGAC +
Preference number: 3 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVSRWVC*AFRMCD
Trigger: GTCACACATCCTAAAGGCCAAGCAAACCCACCGGGA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR CCA 72 bp TCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATaGACTGGTACTGCCCCAAATAAGAGGAACCTAAGA +
Preference number: 3 (lower is better)
Translates to: SYHRSTHKSQLV*TGTAPNKRNLR
Trigger: TCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR CCA 72 bp ATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTaGTATGGACTGGTACTGCCCCAAATAAGAGGAACC +
Preference number: 3 (lower is better)
Translates to: ILLTTGPLTNRS*YGLVLPQIRGT
Trigger: GGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAATTTGTGCAGTGTTCTaGGTCAACCACTCACCAATT +
Preference number: 3 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQICAVF*VNHSPI
Trigger: AATTGGTGAGTGGTTGACCAAGAACACTGCACAAAT...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR TCA 72 bp TTCCACAAAAATATTGTAACTGGCATTCACTCATTATaGTCCACGTCATCTCAGTCTCCACTTTCCAGGCAA +
Preference number: 3 (lower is better)
Translates to: FHKNIVTGIHSL*STSSQSPLSRQ
Trigger: TTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
3UTR CCA 72 bp ACAATGTTCCATACGTTTCCACAAAAATATTGTAACTaGCATTCACTCATTATGATCCACGTCATCTCAGTC +
Preference number: 3 (lower is better)
Translates to: TMFHTFPQKYCN*HSLIMIHVISV
Trigger: GACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTGTGGAAACGTATGGAACATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCGCGGGGGCACGGTaGGTGGCAGTGTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGAGAR*VAVCFG
Trigger: TCCAAAACACACTGCCACCCACCGTGCCCCCGCGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACGCACATCCTGGAGCTaGCTGGTGCCCCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQRTSWS*LVPQSS
Trigger: CGAGCTCTGGGGCACCAGCCAGCTCCAGGATGTGCG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCCGCCGCACATCCTaGAGCTGGCTGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGRRTS*SWLVPQ
Trigger: CTGGGGCACCAGCCAGCTCCAGGATGTGCGGCGGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGACTTGCCGTCCTCCTaGCTCGGGGGTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQDLPSS*LGGVPS
Trigger: AGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTGTGGTGGGCGACTTaGCGTCCTCCTGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQLWWAT*RPPDSG
Trigger: CCCCGAGTCAGGAGGACGGCAAGTCGCCCACCACAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATCGCTTCCTGAACCCTaGGCGTTGTGGTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQSLPEP*ALWWAT
Trigger: AGTCGCCCACCACAACGCTCAGGGTTCAGGAAGCGA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACACAGGCACAGACACTaGCGTGGGTTCCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKHRHRH*RGFPAL
Trigger: GAGCGCGGGGAACCCACGGCAGTGTCTGTGCCTGTG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGCCATCGCTGCCGCCTaGAACTGTTCTGTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQAIAAA*NCSVSL
Trigger: GAGCGAGACAGAACAGTTGCAGGCGGCAGCGATGGC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACTCCAGCTGCTGTTCTaGTTCCGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQLQLLF*FRSHRC
Trigger: GCAGCGATGGCTGCGGAAGCAGAACAGCAGCTGGAG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGTCTTCCCACACGCCTaGCAGGCAATCTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQVFPHA*QAICSR
Trigger: TCGGGAGCAGATTGCCTGCCAGGCGTGTGGGAAGAC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACCCCCACCATCCCGGTaGGTTTGCTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQPPPSR*VCLAFR
Trigger: CCTAAAGGCCAAGCAAACCCACCGGGATGGTGGGGG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACATCCTGGAGCTGGCTaGTGCCCCAGAGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVHPGAG*CPRARR
Trigger: TCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGGATG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGACTTGCCGTCCTCCTaGCTCGGGGGTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKDLPSS*LGGVPS
Trigger: AGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGACTTGCCGTCCTCCTaGCTCGGGGGTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVDLPSS*LGGVPS
Trigger: AGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGGTGGGGGAAATCGTaGACGTCCCTGATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGWGKS*TSLMVA
Trigger: TGCTACCATCAGGGACGTGCACGATTTCCCCCACCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTGTGGTGGGCGACTTaGCGTCCTCCTGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKLWWAT*RPPDSG
Trigger: CCCCGAGTCAGGAGGACGGCAAGTCGCCCACCACAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTCCGCAGCCATCGCTaGCGCCTGCAACTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQFRSHR*RLQLFC
Trigger: ACAGAACAGTTGCAGGCGGCAGCGATGGCTGCGGAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGAAGAACTCCATCCTaGAGACCCATATCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGRTPS*RPISAP
Trigger: CGGCGCGGATATGGGTCTGCAGGATGGAGTTCTTCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCCTGTCCGCCGTGTaGAGTTTCTCATGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGLSAV*SFSCFL
Trigger: GAGGAAGCATGAGAAACTCCACACGGCGGACAGGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATCGCTTCCTGAACCCTaGGCGTTGTGGTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVSLPEP*ALWWAT
Trigger: AGTCGCCCACCACAACGCTCAGGGTTCAGGAAGCGA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTCAGGATCGCTTCCTaGACCCTGAGCGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQFRIAS*TLSVVV
Trigger: CACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACCTGACTCGGGGGTGTaGCTTCTACTGTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQPDSGV*LLLCHQ
Trigger: CTGATGACACAGTAGAAGGCACACCCCCGAGTCAGG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGCCATCGCTGCCGCCTaGAACTGTTCTGTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVAIAAA*NCSVSL
Trigger: GAGCGAGACAGAACAGTTGCAGGCGGCAGCGATGGC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACTCCAGCTGCTGTTCTaGTTCCGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKLQLLF*FRSHRC
Trigger: GCAGCGATGGCTGCGGAAGCAGAACAGCAGCTGGAG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGACCCATATCCGAGATaGAGGAGGCCGGACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQDPYPR*RRPDSN
Trigger: ATTGCTGTCCGGCCTCCTGCATCTCGGATATGGGTC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614697.4
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACCCCCACCATCCCGGTaGGTTTGCTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKPPPSR*VCLAFR
Trigger: CCTAAAGGCCAAGCAAACCCACCGGGATGGTGGGGG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTCCGCAGCCATCGCTaGCGCCTGCAACTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKFRSHR*RLQLFC
Trigger: ACAGAACAGTTGCAGGCGGCAGCGATGGCTGCGGAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATTCCGCAGCCATCGCTaGCGCCTGCAACTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVFRSHR*RLQLFC
Trigger: ACAGAACAGTTGCAGGCGGCAGCGATGGCTGCGGAA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGCTATCGTCTCCAGCTaGTGTTCTGCTTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVAIVSS*CSASAA
Trigger: GGCTGCGGAAGCAGAACAGCAGCTGGAGACGATAGC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACCATCCCGGTGGGTTTaGTTGGCCTTTAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQPSRWV*LAFRMC
Trigger: ACACATCCTAAAGGCCAAGCAAACCCACCGGGATGG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGAAGAACTCCATCCTaGAGACCCATATCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGRTPS*RPISAP
Trigger: CGGCGCGGATATGGGTCTGCAGGATGGAGTTCTTCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACCATATCCTGCAGCCTaGCACAGGCACAGACACTGC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVPYPAA*HRHRHC
Trigger: GCAGTGTCTGTGCCTGTGCCAGGCTGCAGGATATGG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGCCTGTCCGCCGTGTaGAGTTTCTCATGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGLSAV*SFSCFL
Trigger: GAGGAAGCATGAGAAACTCCACACGGCGGACAGGCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCCTGTCCGCCGTGTaGAGTTTCTCATGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGLSAV*SFSCFL
Trigger: GAGGAAGCATGAGAAACTCCACACGGCGGACAGGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGAAGGACTGTCATCCTaGTCCCCGATTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQEGLSS*SPISST
Trigger: TGTAGAGGAAATCGGGGATCAGGATGACAGTCCTTC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTCAGGATCGCTTCCTaGACCCTGAGCGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKFRIAS*TLSVVV
Trigger: CACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACCTGGCCGTAGCAATTaGCCTTCCGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKPGRSN*PSELPH
Trigger: GTGAGGAAGTTCGGAAGGTCAATTGCTACGGCCAGG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTAAATGTTAAGGCTTaGGGGGTCTGGGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQLNVKA*GVWDPK
Trigger: CTTGGGGTCCCAGACCCCTCAAGCCTTAACATTTAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACCTGACTCGGGGGTGTaGCTTCTACTGTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVPDSGV*LLLCHQ
Trigger: CTGATGACACAGTAGAAGGCACACCCCCGAGTCAGG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACCTGACTCGGGGGTGTaGCTTCTACTGTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKPDSGV*LLLCHQ
Trigger: CTGATGACACAGTAGAAGGCACACCCCCGAGTCAGG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATGGCAAATGCCTTGGTaGAGGAGCCACACACAAAAG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQWQMPW*RSHTQK
Trigger: CTTTTGTGTGTGGCTCCTGCACCAAGGCATTTGCCA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCTGGAGCTGGCTGGTaGCCCAGAGCTCGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPGAGW*PRARRE
Trigger: TTCTCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACGGGGGCACGGTGGGTaGCAGTGTGTTTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKRGHGG*QCVLDF
Trigger: AAAATCCAAAACACACTGCCACCCACCGTGCCCCCG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAATTCTGGGGTCTCCATaGATTCTACTTCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQILGSP*ILLPGR
Trigger: ACGGCCAGGAAGTAGAATCCATGGAGACCCCAGAAT...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCTGTTGTCCAGCCTaGTGTCTGTTCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGCCPA*CLFIFH
Trigger: GTGAAAGATGAACAGACACCAGGCTGGACAACAGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATGTTCTGTCTCGCTCTaGATGGCACTGGGGGTAACC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKCSVSL*MALGVT
Trigger: GGTTACCCCCAGTGCCATCCAGAGCGAGACAGAACA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGACTTGCCGTCCTCCTaGCTCGGGGGTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSDLPSS*LGGVPS
Trigger: AGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACACCAGACAAGACAGTaGAACGGTTTGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQHQTRQ*NGLVRT
Trigger: AGTTCTGACCAAACCGTTTCACTGTCTTGTCTGGTG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGAAGAACTCCATCCTaGAGACCCATATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGRTPS*RPISCS
Trigger: GCTGCAGGATATGGGTCTGCAGGATGGAGTTCTTCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTGTGGTGGGCGACTTaGCGTCCTCCTGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSLWWAT*RPPDSG
Trigger: CCCCGAGTCAGGAGGACGGCAAGTCGCCCACCACAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAAGATGCCTTGGCAAATaGCTTGGTGCAGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVRCLGK*LGAGAT
Trigger: TGTGGCTCCTGCACCAAGGCATTTGCCAAGGCATCT...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAAGATGCCTTGGCAAATaGCTTGGTGCAGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKRCLGK*LGAGAT
Trigger: TGTGGCTCCTGCACCAAGGCATTTGCCAAGGCATCT...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACCATCCCGGTGGGTTTaGTTGGCCTTTAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKPSRWV*LAFRMC
Trigger: ACACATCCTAAAGGCCAAGCAAACCCACCGGGATGG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATGTTTTCATCGGGACTaGACACATCACGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQCFHRD*THHASE
Trigger: CTCAGAAGCGTGATGTGTCCAGTCCCGATGAAAACA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGCTTTGTCACACATGTaGCACGCAAACGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQALSHM*HANGLS
Trigger: TGAAAGACCGTTTGCGTGCCACATGTGTGACAAAGC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACTCACAAATCGCAGCTaGTATGGACTGGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVLTNRS*YGLVLP
Trigger: GGGCAGTACCAGTCCATACCAGCTGCGATTTGTGAG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGAAGGACTGTCATCCTaGTCCCCGATTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVEGLSS*SPISST
Trigger: TGTAGAGGAAATCGGGGATCAGGATGACAGTCCTTC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATTAAATGTTAAGGCTTaGGGGGTCTGGGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVLNVKA*GVWDPK
Trigger: CTTGGGGTCCCAGACCCCTCAAGCCTTAACATTTAA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACAGGGCAATCAAGATTaGGGAAGAACACTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQQGNQD*GRTLQQ
Trigger: TTGCTGAAGTGTTCTTCCTCAATCTTGATTGCCCTG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGTGTGGAGTTTCTCATaGTTCCTCAATCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQVWSFS*FLNLPS
Trigger: TGAAGGCAGATTGAGGAAGCATGAGAAACTCCACAC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATGGCAAATGCCTTGGTaGAGGAGCCACACACAAAAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVWQMPW*RSHTQK
Trigger: CTTTTGTGTGTGGCTCCTGCACCAAGGCATTTGCCA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATGGCAAATGCCTTGGTaGAGGAGCCACACACAAAAG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKWQMPW*RSHTQK
Trigger: CTTTTGTGTGTGGCTCCTGCACCAAGGCATTTGCCA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACCTTTTCAGATCAGATaGCTTGGCAAATGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQPFQIR*LGKCLG
Trigger: ACCAAGGCATTTGCCAAGGCATCTGATCTGAAAAGG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGCCATCGCTGCCGCCTaGAACTGTTCTGTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSAIAAA*NCSVSL
Trigger: GAGCGAGACAGAACAGTTGCAGGCGGCAGCGATGGC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCTCCAGCTGCTGTTCTaGTTCCGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSLQLLF*FRSHRC
Trigger: GCAGCGATGGCTGCGGAAGCAGAACAGCAGCTGGAG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAATTCTGGGGTCTCCATaGATTCTACTTCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKILGSP*ILLPGR
Trigger: ACGGCCAGGAAGTAGAATCCATGGAGACCCCAGAAT...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGCTGTTGTCCAGCCTaGTGTCTGTTCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGCCPA*CLFIFH
Trigger: GTGAAAGATGAACAGACACCAGGCTGGACAACAGCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCTGTTGTCCAGCCTaGTGTCTGTTCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGCCPA*CLFIFH
Trigger: GTGAAAGATGAACAGACACCAGGCTGGACAACAGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGTCTTCCCACACGCCTaGCAGGCAATCTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSVFPHA*QAICSR
Trigger: TCGGGAGCAGATTGCCTGCCAGGCGTGTGGGAAGAC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACATTTCACAAACAAATaGCCTGTCCGCCGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVHFTNK*PVRRVE
Trigger: CTCCACACGGCGGACAGGCCATTTGTTTGTGAAATG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCCCCACCATCCCGGTaGGTTTGCTTGGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPPPSR*VCLAFR
Trigger: CCTAAAGGCCAAGCAAACCCACCGGGATGGTGGGGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACACCAGACAAGACAGTaGAACGGTTTGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKHQTRQ*NGLVRT
Trigger: AGTTCTGACCAAACCGTTTCACTGTCTTGTCTGGTG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATGCATATTGTTCTCGTaGCTTTTCAGATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQCILFS*LFRSDA
Trigger: GGCATCTGATCTGAAAAGGCACGAGAACAATATGCA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTCCGCAGCCATCGCTaGCGCCTGCAACTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSFRSHR*RLQLFC
Trigger: ACAGAACAGTTGCAGGCGGCAGCGATGGCTGCGGAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGCTATCGTCTCCAGCTaGTGTTCTGCTTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSAIVSS*CSASAA
Trigger: GGCTGCGGAAGCAGAACAGCAGCTGGAGACGATAGC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATCTACATCATCATCCTaGGTGTCAGCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKSTSSS*VSAASP
Trigger: TGGAGATGCTGCTGACACCCAGGATGATGATGTAGA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATCTACATCATCATCCTaGGTGTCAGCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVSTSSS*VSAASP
Trigger: TGGAGATGCTGCTGACACCCAGGATGATGATGTAGA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGGCCTGTCCGCCGTGTaGAGTTTCTCATGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSGLSAV*SFSCFL
Trigger: GAGGAAGCATGAGAAACTCCACACGGCGGACAGGCC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGCTTTGTCACACATGTaGCACGCAAACGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKALSHM*HANGLS
Trigger: TGAAAGACCGTTTGCGTGCCACATGTGTGACAAAGC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAAAATCGCAGCTGGTATaGACTGGTACTGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVKSQLV*TGTAPN
Trigger: ATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTT...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACACATCTGTGTGCTCTaGATTTCACATCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKHICVL*ISHPQP
Trigger: TGGTTGAGGATGTGAAATTCAGAGCACACAGATGTG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACGGATACCAAGAATCTaGCCCGATGACATCATTAAG +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVRIPRI*PDDIIK
Trigger: CTTAATGATGTCATCGGGTCAGATTCTTGGTATCCG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACGGATACCAAGAATCTaGCCCGATGACATCATTAAG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKRIPRI*PDDIIK
Trigger: CTTAATGATGTCATCGGGTCAGATTCTTGGTATCCG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTCAGGATCGCTTCCTaGACCCTGAGCGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSFRIAS*TLSVVV
Trigger: CACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCTGGCCGTAGCAATTaGCCTTCCGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPGRSN*PSELPH
Trigger: GTGAGGAAGTTCGGAAGGTCAATTGCTACGGCCAGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGCATTCACTCATTATaGTCCACGTCATCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGIHSL*STSSQS
Trigger: AGACTGAGATGACGTGGATCATAATGAGTGAATGCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGTGTGGAGTTTCTCATaGTTCCTCAATCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKVWSFS*FLNLPS
Trigger: TGAAGGCAGATTGAGGAAGCATGAGAAACTCCACAC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGTGTGGAGTTTCTCATaGTTCCTCAATCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVVWSFS*FLNLPS
Trigger: TGAAGGCAGATTGAGGAAGCATGAGAAACTCCACAC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTGTTCTGTCTCGCTCTaGATGGCACTGGGGGTAACC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSCSVSL*MALGVT
Trigger: GGTTACCCCCAGTGCCATCCAGAGCGAGACAGAACA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGACACATCACGCTTCTaGGAACACAGTTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVDTSRF*EHSLSK
Trigger: TTTGGATAAACTGTGTTCTCAGAAGCGTGATGTGTC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATCTCATTTACGGCTATaGAAAGGCAATCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQSHLRL*KGNQLL
Trigger: TAGAAGTTGATTGCCTTTTCATAGCCGTAAATGAGA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTATGCATATTGTTCTCGTaGCTTTTCAGATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVCILFS*LFRSDA
Trigger: GGCATCTGATCTGAAAAGGCACGAGAACAATATGCA...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATGCATATTGTTCTCGTaGCTTTTCAGATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKCILFS*LFRSDA
Trigger: GGCATCTGATCTGAAAAGGCACGAGAACAATATGCA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCATCCCGGTGGGTTTaGTTGGCCTTTAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPSRWV*LAFRMC
Trigger: ACACATCCTAAAGGCCAAGCAAACCCACCGGGATGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCTTATATCCTGTGTaGATTTTTAGGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGLYPV*IFRCSF
Trigger: GAAAGAACACCTAAAAATCCACACAGGATATAAGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGAGAGAGGTGCTTACTaGGCAACATTAATACTAGAC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVERGAY*ATLILD
Trigger: GTCTAGTATTAATGTTGCCCAGTAAGCACCTCTCTC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCCGGTGGGTTTGCTTaGCCTTTAGGATGTGTGACT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPGGFA*PLGCVT
Trigger: AGTCACACATCCTAAAGGCCAAGCAAACCCACCGGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCTCACAAATCGCAGCTaGTATGGACTGGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSLTNRS*YGLVLP
Trigger: GGGCAGTACCAGTCCATACCAGCTGCGATTTGTGAG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGAAGGACTGTCATCCTaGTCCCCGATTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSEGLSS*SPISST
Trigger: TGTAGAGGAAATCGGGGATCAGGATGACAGTCCTTC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGTCTTTCATTACTGTaGACTCTCTCATGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGLSLL*TLSCFF
Trigger: AAAGAAGCATGAGAGAGTTCACAGTAATGAAAGACC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGTCTTTCATTACTGTaGACTCTCTCATGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGLSLL*TLSCFF
Trigger: AAAGAAGCATGAGAGAGTTCACAGTAATGAAAGACC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAAAAAAGGGAGAGAGGTaGTTACTGGGCAACATTAAT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKKKGER*LLGNIN
Trigger: ATTAATGTTGCCCAGTAAGCACCTCTCTCCCTTTTT...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGGAAGAACTCCATCCTaGAGACCCATATCCGAGATG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSGRTPS*RPISEM
Trigger: CATCTCGGATATGGGTCTGCAGGATGGAGTTCTTCC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614697.4
CDS-3UTR CCA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGCAATACTTACTTTTaGACTGACCATTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGNTYF*TDHCFH
Trigger: ATGAAAACAATGGTCAGTCCAAAAGTAAGTATTGCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGGCTGTTGTCCAGCCTaGTGTCTGTTCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSGCCPA*CLFIFH
Trigger: GTGAAAGATGAACAGACACCAGGCTGGACAACAGCC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTTGTGCAGTGTTCTTaGTCAACCACTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKFVQCS*STTHQF
Trigger: AAATTGGTGAGTGGTTGACCAAGAACACTGCACAAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCACCAGACAAGACAGTaGAACGGTTTGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSHQTRQ*NGLVRT
Trigger: AGTTCTGACCAAACCGTTTCACTGTCTTGTCTGGTG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATCTCATTTACGGCTATaGAAAGGCAATCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKSHLRL*KGNQLL
Trigger: TAGAAGTTGATTGCCTTTTCATAGCCGTAAATGAGA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTTCACGGAAATCTTTaGTGTGTACATGTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKFHGNL*CVHVVQ
Trigger: CTGAACTACATGTACACAGCAAAGATTTCCGTGAAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTGTTTTCATCGGGACTaGACACATCACGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSCFHRD*THHASE
Trigger: CTCAGAAGCGTGATGTGTCCAGTCCCGATGAAAACA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCTTATATCCTGTGTaGATTTTTAGGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGLYPV*IFRCSF
Trigger: GAAAGAACACCTAAAAATCCACACAGGATATAAGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGCTTATATCCTGTGTaGATTTTTAGGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGLYPV*IFRCSF
Trigger: GAAAGAACACCTAAAAATCCACACAGGATATAAGCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGCTTTGTCACACATGTaGCACGCAAACGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSALSHM*HANGLS
Trigger: TGAAAGACCGTTTGCGTGCCACATGTGTGACAAAGC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCAAATCGCAGCTGGTATaGACTGGTACTGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSKSQLV*TGTAPN
Trigger: ATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTT...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCACATCTGTGTGCTCTaGATTTCACATCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSHICVL*ISHPQP
Trigger: TGGTTGAGGATGTGAAATTCAGAGCACACAGATGTG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGGCATTCACTCATTATaGTCCACGTCATCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSGIHSL*STSSQS
Trigger: AGACTGAGATGACGTGGATCATAATGAGTGAATGCC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR TCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCAGGGCAATCAAGATTaGGGAAGAACACTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSQGNQD*GRTLQQ
Trigger: TTGCTGAAGTGTTCTTCCTCAATCTTGATTGCCCTG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGTGTGGAGTTTCTCATaGTTCCTCAATCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSVWSFS*FLNLPS
Trigger: TGAAGGCAGATTGAGGAAGCATGAGAAACTCCACAC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCCTTTTCAGATCAGATaGCTTGGCAAATGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSPFQIR*LGKCLG
Trigger: ACCAAGGCATTTGCCAAGGCATCTGATCTGAAAAGG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGCAATACTTACTTTTaGACTGACCATTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGNTYF*TDHCFH
Trigger: ATGAAAACAATGGTCAGTCCAAAAGTAAGTATTGCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTAGGCAATACTTACTTTTaGACTGACCATTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVGNTYF*TDHCFH
Trigger: ATGAAAACAATGGTCAGTCCAAAAGTAAGTATTGCC...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTGCATATTGTTCTCGTaGCTTTTCAGATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSCILFS*LFRSDA
Trigger: GGCATCTGATCTGAAAAGGCACGAGAACAATATGCA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGAGAGAGGTGCTTACTaGGCAACATTAATACTAGAC +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSERGAY*ATLILD
Trigger: GTCTAGTATTAATGTTGCCCAGTAAGCACCTCTCTC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTTGTGCAGTGTTCTTaGTCAACCACTCACCAATTT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSFVQCS*STTHQF
Trigger: AAATTGGTGAGTGGTTGACCAAGAACACTGCACAAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR GCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTTCACGGAAATCTTTaGTGTGTACATGTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSFHGNL*CVHVVQ
Trigger: CTGAACTACATGTACACAGCAAAGATTTCCGTGAAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CCA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCGGCAATACTTACTTTTaGACTGACCATTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSGNTYF*TDHCFH
Trigger: ATGAAAACAATGGTCAGTCCAAAAGTAAGTATTGCC...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS GCA 90 bp CATCCTGCAGACCCATATCCTGCAGCCTGGCACAGGCACAGACACTaGCGTGGGTTCCCCGCGCTCGCTAGCAAACGCAGGCCGGGACCG +
Preference number: 5 (lower is better)
Translates to: HPADPYPAAWHRHRH*RGFPALASKRRPGP
Trigger: CGGTCCCGGCCTGCGTTTGCTAGCGAGCGCGGGGAACCCACGGCAGTGTCTGTGCCTGTGCCAGGCTGCAGGATATGGGTCTGCAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357006.8
CDS CCA 90 bp GCGCCGCCGGCTTGCGCAGGCACGGAACCCGACCGGGTCTCTAAGTaGGCGAGCAAAGAAAGGGTTAATCCGGGCCCTTGCCGACGCTTT +
Preference number: 5 (lower is better)
Translates to: APPACAGTEPDRVSK*ASKERVNPGPCRRF
Trigger: AAAGCGTCGGCAAGGGCCCGGATTAACCCTTTCTTTGCTCGCCCACTTAGAGACCCGGTCGGGTTCCGTGCCTGCGCAAGCCGGCGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400143.7
CDS TCA 90 bp GAACTTCCTCACTCCCCAGCTCTTTCAGGATCGCTTCCTGAACCCTaGGCGTTGTGGTGGGCGACTTGCCGTCCTCCTGACTCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ELPHSPALSGSLPEP*ALWWATCRPPDSGV
Trigger: CACCCCCGAGTCAGGAGGACGGCAAGTCGCCCACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAAAGAGCTGGGGAGTGAGGAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 90 bp CTCGGGGGTGTGCCTTCTACTGTGTCATCAGAAGGACTGTCATCCTaGTCCCCGATTTCCTCTACATCATCATCCTGGGTGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LGGVPSTVSSEGLSS*SPISSTSSSWVSAA
Trigger: TGCTGCTGACACCCAGGATGATGATGTAGAGGAAATCGGGGATCAGGATGACAGTCCTTCTGATGACACAGTAGAAGGCACACCCCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATGTCACTGGCGGCTGTaGTCCAGCCTGGTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQCHWRL*SSLVSV
Trigger: AACAGACACCAGGCTGGACAACAGCCGCCAGTGACA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAAGGGACCCCAAGTCTTTaGATTCTGGGGTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQGTPSL*ILGSPW
Trigger: CCATGGAGACCCCAGAATCAAAAGACTTGGGGTCCC...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATGTCACTGGCGGCTGTaGTCCAGCCTGGTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKCHWRL*SSLVSV
Trigger: AACAGACACCAGGCTGGACAACAGCCGCCAGTGACA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAGGGACCCCAAGTCTTTaGATTCTGGGGTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKGTPSL*ILGSPW
Trigger: CCATGGAGACCCCAGAATCAAAAGACTTGGGGTCCC...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATCCCGGTGGGTTTGCTaGGCCTTTAGGATGTGTGAC +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKSRWVC*AFRMCD
Trigger: GTCACACATCCTAAAGGCCAAGCAAACCCACCGGGA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS GCA 90 bp TTTTCAGGTTGGGGAGAGTGGCAGGTAGGTAGCTGGTACATCAAGTaGAGTTCTGAACAGATATGGACTAGAACAGATAAGGGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: FSGWGEWQVGSWYIK*SSEQIWTRTDKGCS
Trigger: GCTACAGCCCTTATCTGTTCTAGTCCATATCTGTTCAGAACTGCACTTGATGTACCAGCTACCTACCTGCCACTCTCCCCAACCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585253.1
CDS-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAACTTCATCCTAACATCTaGGGCATAACACACACCAAT +
Preference number: 5 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQLHPNI*GITHTN
Trigger: ATTGGTGTGTGTTATGCCCAAGATGTTAGGATGAAG...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTCCCGGTGGGTTTGCTaGGCCTTTAGGATGTGTGAC +
Preference number: 5 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSSRWVC*AFRMCD
Trigger: GTCACACATCCTAAAGGCCAAGCAAACCCACCGGGA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGTATGGACTGGTACTGCCCCAAATAAGAGGAACCTAAGAGCTTGGCTCCAATTTTCACGGAAATCTTaGCTGTGTACATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LVWTGTAPNKRNLRAWLQFSRKS*LCTCSS
Trigger: TGAACTACATGTACACAGCAAAGATTTCCGTGAAAA...TTGGAGCCAAGCTCTTAGGTTCCTCTTATTTGGGGCAGTACCAGTCCATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAAATTTGTGCAGTGTTCTaGGTCAACCACTCACCAATT +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKICAVF*VNHSPI
Trigger: AATTGGTGAGTGGTTGACCAAGAACACTGCACAAAT...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAACTTCATCCTAACATCTaGGGCATAACACACACCAAT +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKLHPNI*GITHTN
Trigger: ATTGGTGTGTGTTATGCCCAAGATGTTAGGATGAAG...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp GAGAGCCTTTTCTATTCTTCTTACCACAGGTCCACTCACAAATCGCAGCTGGTACTTCATCCTAACATCTaGGGCATAACACACACCAAT +
Preference number: 5 (lower is better)
Translates to: ESLFYSSYHRSTHKSQLVLHPNI*GITHTN
Trigger: ATTGGTGTGTGTTATGCCCAAGATGTTAGGATGAAG...TACCAGCTGCGATTTGTGAGTGGACCTGTGGTAAGAAGAATAGAAAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCACTTTCCAGGCAAATTTTCACGGAAATCTTaGCTGTGTACATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LAFTHYDPRHLSLHFPGKFSRKS*LCTCSS
Trigger: TGAACTACATGTACACAGCAAAGATTTCCGTGAAAA...TTTGCCTGGAAAGTGGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCATTTGTGCAGTGTTCTaGGTCAACCACTCACCAATT +
Preference number: 5 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSICAVF*VNHSPI
Trigger: AATTGGTGAGTGGTTGACCAAGAACACTGCACAAAT...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCCTTCATCCTAACATCTaGGGCATAACACACACCAAT +
Preference number: 5 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSLHPNI*GITHTN
Trigger: ATTGGTGTGTGTTATGCCCAAGATGTTAGGATGAAG...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS-3UTR CAA 90 bp CAAAAATATTGTAACTGGCATTCACTCATTATGATCCACGTCATCTCAGTCTCCTTTTCACGGAAATCTTaGCTGTGTACATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: QKYCNWHSLIMIHVISVSFSRKS*LCTCSS
Trigger: TGAACTACATGTACACAGCAAAGATTTCCGTGAAAA...GGAGACTGAGATGACGTGGATCATAATGAGTGAATGCCAGTTACAATATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357006.8
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS CCA 72 bp CGCCGCGCCGCTGGCGGCCGCCGCACATCCTGGAGCTaGCTGGTGCCCCAGAGCTCGGCGAGAACGCGCGTC +
Preference number: 6 (lower is better)
Translates to: RRAAGGRRTSWS*LVPQSSARTRV
Trigger: GACGCGCGTTCTCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGGATGTGCGGCGGCCGCCAGCGGCGCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS CCA 72 bp TATCCGCGCCGCGCCGCTGGCGGCCGCCGCACATCCTaGAGCTGGCTGGTGCCCCAGAGCTCGGCGAGAACG +
Preference number: 6 (lower is better)
Translates to: YPRRAAGGRRTS*SWLVPQSSART
Trigger: CGTTCTCGCCGAGCTCTGGGGCACCAGCCAGCTCCAGGATGTGCGGCGGCCGCCAGCGGCGCGGCGCGGATA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651870.1
CDS CCA 72 bp ACTCCATCCTGCAGACCCATATCCGCGCCGCGCCGCTaGCGGCCGCCGCACATCCTGGAGCTGGCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: TPSCRPISAPRR*RPPHILELAGA
Trigger: GGCACCAGCCAGCTCCAGGATGTGCGGCGGCCGCCAGCGGCGCGGCGCGGATATGGGTCTGCAGGATGGAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582388.5
ENST00000615385.4
ENST00000651870.1
CDS CCA 72 bp GCTTGCGCAGGCACGGAACCCGACCGGGTCTCTAAGTaGGCGAGCAAAGAAAGGGTTAATCCGGGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: ACAGTEPDRVSK*ASKERVNPGPC
Trigger: GCAAGGGCCCGGATTAACCCTTTCTTTGCTCGCCCACTTAGAGACCCGGTCGGGTTCCGTGCCTGCGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400143.7
CDS TCA 72 bp CACTCCCCAGCTCTTTCAGGATCGCTTCCTGAACCCTaGGCGTTGTGGTGGGCGACTTGCCGTCCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: HSPALSGSLPEP*ALWWATCRPPD
Trigger: GTCAGGAGGACGGCAAGTCGCCCACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAAAGAGCTGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 72 bp ACCCTGAGCGTTGTGGTGGGCGACTTGCCGTCCTCCTaGCTCGGGGGTGTGCCTTCTACTGTGTCATCAGAA +
Preference number: 6 (lower is better)
Translates to: TLSVVVGDLPSS*LGGVPSTVSSE
Trigger: TTCTGATGACACAGTAGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTCGCCCACCACAACGCTCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 72 bp ACTTCCTCACTCCCCAGCTCTTTCAGGATCGCTTCCTaGACCCTGAGCGTTGTGGTGGGCGACTTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: TSSLPSSFRIAS*TLSVVVGDLPS
Trigger: GGACGGCAAGTCGCCCACCACAACGCTCAGGGTTCAGGAAGCGATCCTGAAAGAGCTGGGGAGTGAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS GCA 72 bp TGGTGGGCGACTTGCCGTCCTCCTGACTCGGGGGTGTaGCTTCTACTGTGTCATCAGAAGGACTGTCATCCT +
Preference number: 6 (lower is better)
Translates to: WWATCRPPDSGV*LLLCHQKDCHP
Trigger: AGGATGACAGTCCTTCTGATGACACAGTAGAAGGCACACCCCCGAGTCAGGAGGACGGCAAGTCGCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 72 bp GTGCCTTCTACTGTGTCATCAGAAGGACTGTCATCCTaGTCCCCGATTTCCTCTACATCATCATCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: VPSTVSSEGLSS*SPISSTSSSWV
Trigger: CACCCAGGATGATGATGTAGAGGAAATCGGGGATCAGGATGACAGTCCTTCTGATGACACAGTAGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS GCA 72 bp CAAACAAATGGCCTGTCCGCCGTGTGGAGTTTCTCATaGTTCCTCAATCTGCCTTCATCAGAAAACGTCTTC +
Preference number: 6 (lower is better)
Translates to: QTNGLSAVWSFS*FLNLPSSENVF
Trigger: GAAGACGTTTTCTGATGAAGGCAGATTGAGGAAGCATGAGAAACTCCACACGGCGGACAGGCCATTTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS CCA 72 bp GGTAGCTGGTACATCAAGTGCAGTTCTGAACAGATATaGACTAGAACAGATAAGGGCTGTAGCACTCGGGCA +
Preference number: 6 (lower is better)
Translates to: GSWYIKCSSEQI*TRTDKGCSTRA
Trigger: TGCCCGAGTGCTACAGCCCTTATCTGTTCTAGTCCATATCTGTTCAGAACTGCACTTGATGTACCAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585253.1
CDS CAA 90 bp GGTGACCATAAAGCAAATACTCAAACTTCATGTCACTGGCGGCTGTaGTCCAGCCTGGTGTCTGTTCATCTTTCACTTCACTCATCCCAT +
Preference number: 6 (lower is better)
Translates to: GDHKANTQTSCHWRL*SSLVSVHLSLHSSH
Trigger: ATGGGATGAGTGAAGTGAAAGATGAACAGACACCAGGCTGGACAACAGCCGCCAGTGACATGAAGTTTGAGTATTTGCTTTATGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS GCA 72 bp TGGGGAGAGTGGCAGGTAGGTAGCTGGTACATCAAGTaGAGTTCTGAACAGATATGGACTAGAACAGATAAG +
Preference number: 6 (lower is better)
Translates to: WGEWQVGSWYIK*SSEQIWTRTDK
Trigger: CTTATCTGTTCTAGTCCATATCTGTTCAGAACTGCACTTGATGTACCAGCTACCTACCTGCCACTCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585253.1
CDS CAA 72 bp AAAGCAAATACTCAAACTTCATGTCACTGGCGGCTGTaGTCCAGCCTGGTGTCTGTTCATCTTTCACTTCAC +
Preference number: 6 (lower is better)
Translates to: KANTQTSCHWRL*SSLVSVHLSLH
Trigger: GTGAAGTGAAAGATGAACAGACACCAGGCTGGACAACAGCCGCCAGTGACATGAAGTTTGAGTATTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 72 bp CCATTGTTTTCATCGGGACTGGACACATCACGCTTCTaGGAACACAGTTTATCCAAAAATCGGATACCAAGA +
Preference number: 6 (lower is better)
Translates to: PLFSSGLDTSRF*EHSLSKNRIPR
Trigger: TCTTGGTATCCGATTTTTGGATAAACTGTGTTCTCAGAAGCGTGATGTGTCCAGTCCCGATGAAAACAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582135.5
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1
CDS TCA 72 bp GAACACAGTTTATCCAAAAATCGGATACCAAGAATCTaGCCCGATGACATCATTAAGTTAACATCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: EHSLSKNRIPRI*PDDIIKLTSSF
Trigger: AAAAGAAGATGTTAACTTAATGATGTCATCGGGTCAGATTCTTGGTATCCGATTTTTGGATAAACTGTGTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357006.8
ENST00000400143.7
ENST00000582135.5
ENST00000582388.5
ENST00000614697.4
ENST00000615385.4
ENST00000651870.1