RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124256

Ensembl transcript IDs: ENST00000371173.8, ENST00000395822.7, ENST00000432548.2, ENST00000453793.1, ENST00000461547.5, ENST00000480037.1, ENST00000538947.5, ENST00000541799.1, ENST00000546110.5

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGTTATGTCTGGAAGCAAGCAGGTCAAACAAGACGCTAAGGAATaGAGAGAGCAGCAGGCTAGTCTCCCTAGCATGCGCCCACCCCCA +
Preference number: 1 (lower is better)
Translates to: QVMSGSKQVKQDAKE*REQQASLPSMRPPP
Trigger: TGGGGGTGGGCGCATGCTAGGGAGACTAGCCTGCTGCTCTCTGCATTCCTTAGCGTCTTGTTTGACCTGCTTGCTTCCAGACATAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCTGAACCCATCCCCATaGCAGGTCCATTCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: NSRQMPRAQERVERVPWALNPSP*QVHSPK
Trigger: TTTGGGGGAATGGACCTGGCATGGGGATGGGTTCAG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCATGCAGGTTATGTCTaGAAGCAAGCAGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: NSRQMPRAQERVERVPWAHAGYV*KQAGQT
Trigger: TGTTTGACCTGCTTGCTTCCAGACATAACCTGCATG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR-3UTR GCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCCTGAACCCATCCCCATaGCAGGTCCATTCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSLNPSP*QVHSPK
Trigger: TTTGGGGGAATGGACCTGGCATGGGGATGGGTTCAG...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR-3UTR GCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCAAGACGCTAAGGAATaGAGAGAGCAGCAGGCTAGT +
Preference number: 2 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTQDAKE*REQQAS
Trigger: ACTAGCCTGCTGCTCTCTGCATTCCTTAGCGTCTTG...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR-3UTR CCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGCTACCCACCTCCTCTTaGCACACCAAAGGTTCCCCA +
Preference number: 2 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQLPTSS*HTKGSP
Trigger: TGGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAG...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR CCA 72 bp TGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTaGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: CPHSQDGRKGGL*GSGSNPFPLEG
Trigger: GCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541799.1
3UTR-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGTCTACCCACCTCCTCTaGGCACACCAAAGGTTCCCC +
Preference number: 3 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQSTHLL*AHQRFP
Trigger: GGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAGA...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
3UTR TCA 72 bp AGAAAGTATCAGAGTACAGGGAAATCAGGAGAGCTTTaGTCCAGGTGTCCTCATTCTCAGGACGGCCGTAAA +
Preference number: 3 (lower is better)
Translates to: RKYQSTGKSGEL*SRCPHSQDGRK
Trigger: TTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATTTCCCTGTACTCTGATACTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTGCGGGACGACGACCTaGGTCCTCCCCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWACGTTT*VLPWLP
Trigger: GGGGAGCCAGGGGAGGACGCAGGTCGTCGTCCCGCA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGCCAGTGCTTGGGCGATaGCCAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DPGVLILRTAVKVDCGGLPVLGR*PGPSGD
Trigger: GTCCCCAGAGGGCCCTGGTCATCGCCCAAGCACTGG...CAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCATGGACTGCTCCATGTaGATGTCCTGGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAMDCSM*MSWGPQ
Trigger: CTGGGGGCCCCAGGACATCCACATGGAGCAGTCCAT...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGACCCAGAGGATCCGGTaGCTCCCCACCGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: DPGVLILRTAVKVDCGGLTQRIR*LPTEVP
Trigger: GGGGACCTCGGTGGGGAGCCACCGGATCCTCTGGGT...CAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCGTTGTTGGCTGAACTaGGGGCCAGGGGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWRCWLN*GPGVSG
Trigger: TCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGATCACCTGGTGCCATTaGAGGGAGGTGGCGTGGACC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWITWCH*REVAWT
Trigger: GGTCCACGCCACCTCCCTTCAATGGCACCAGGTGAT...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTCGAGTGGCTGGGAGTaGTGGGCTGACCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWASSGWE*WADQCL
Trigger: GAGACATTGGTCAGCCCATCACTCCCAGCCACTCGA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTGTCCAAGCCCCACGTaGGGCTGTGCACTAAATCCC +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWACPSPT*GCALNP
Trigger: GGGATTTAGTGCACAGCCTCACGTGGGGCTTGGACA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCCCCACGTGAGGCTGTaGACTAAATCCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWPHVRL*TKSHLP
Trigger: GGGGAGGTGGGATTTAGTGCACAGCCTCACGTGGGG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCAGCCCGGAAATAGATaGCTAGCCAGGCCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWQPGNR*LARPAR
Trigger: TCTGGCCGGCCTGGCTAGGCATCTATTTCCGGGCTG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR CCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCTCATTCCCAGTGCTTaGGCGATGACCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWLIPSA*AMTRAL
Trigger: GAGGGCCCTGGTCATCGCCCAAGCACTGGGAATGAG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCCTCATTCCCAGTGCTTaGGCGATGACCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGLWGSGSNPFPLEGRIPLIPSA*AMTRAL
Trigger: GAGGGCCCTGGTCATCGCCCAAGCACTGGGAATGAG...GGGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTCGGACGGGACGCCGTaGAGCCTCATCTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWSDGTP*SLISLL
Trigger: CAGCAATGAGATGAGGCTCCACGGCGTCCCGTCCGA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGTAGCTGCATGTTGCTaGGGCCTCTCGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAVAACC*GLSASL
Trigger: CAGAGAAGCCGAGAGGCCCCAGCAACATGCAGCTAC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR TCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCGAGGCTGGGGCTTCTaGAGTGGCCGAGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTRGWGF*SGRAWC
Trigger: GCACCAGGCTCGGCCACTTCAGAAGCCCCAGCCTCG...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCGAGGCTGGGGCTTCTaGAGTGGCCGAGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPRGWGF*SGRAWC
Trigger: GCACCAGGCTCGGCCACTTCAGAAGCCCCAGCCTCG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTCTGCACTGTGGCCCTaGGAGGGTGGGCTAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPSALWP*EGGLGR
Trigger: TCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGA...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCAGGTGGCAGGGGATGTaGGGGAGACTTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWARWQGM*GRLSTP
Trigger: AGGAGTTGAAAGTCTCCCTCACATCCCCTGCCACCT...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR TCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCTTCCCCCTCAGGGTaGGTTCCTGGACTGGGAATT +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWASPSG*VPGLGI
Trigger: AATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGC...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTCGAGTGGCTGGGAGTaGTGGGCTGACCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWSSGWE*WADQCL
Trigger: GAGACATTGGTCAGCCCATCACTCCCAGCCACTCGA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGAGACTTGGCAGGTGTaGAGGCTTCTGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWETWQV*RLLHCG
Trigger: GCCACAGTGCAGAAGCCTGCACACCTGCCAAGTCTC...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTCTGGATTGTGTGTCTaGGGGACGACGACCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWSGLCV*GTTTCV
Trigger: GACGCAGGTCGTCGTCCCGCAGACACACAATCCAGA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGTAACTCCAGGCAGATaGCCCGAGCCCAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWVTPGR*PEPRKE
Trigger: CTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTAC...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGAGCCTGGTGCTTCTTaGAGCTCTGAACCCACAAGG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAEPGAS*SSEPTR
Trigger: CCTTGTGGGTTCAGAGCTGCAAGAAGCACCAGGCTC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR CCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGGAGTCGGAGAGACTTaGCAGGTGTGCAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWGVGET*QVCRLL
Trigger: CAGAAGCCTGCACACCTGCCAAGTCTCTCCGACTCC...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGTAGCTGCATGTTGCTaGGGCCTCTCGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DPGVLILRTAVKVDCGGLVAACC*GLSAGL
Trigger: CAGCCCTGCCGAGAGGCCCCAGCAACATGCAGCTAC...CAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTGTTGCTGTTGCCGATaGTGGCGTCCTCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWACCCCR*WRPRES
Trigger: GCTTTCTCGAGGACGCCACCATCGGCAACAGCAACA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCGTTGTTGGCTGAACTaGGGGCCAGGGGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATRCWLN*GPGVSG
Trigger: TCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACG...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp TGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTCCCGTTGTTGGCTaGACTGAGGGCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CPHSQDGRKGGLWGSGSNPPVVG*TEGQGS
Trigger: AGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAGG...GTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTCTGGGCTCTCTTGGGTaGCTTACCGTCCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPLGSLG*LTVLPG
Trigger: TCCAGGGAGGACGGTAAGTCACCCAAGAGAGCCCAG...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCAGGTGTGCAGGCTTCTaGACTGTGGCCCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATRCAGF*TVALRG
Trigger: CCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCT...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCATGCTGACAGCAGCTaGAAGGAGTCGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAHADSS*KESERL
Trigger: AAGTCTCTCCGACTCCTTGCAGCTGCTGTCAGCATG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp TGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACGGACAAGGCCAGCTCTaGAGGACCCTCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CPHSQDGRKGGLWGSGSNGQGQL*RTLAFR
Trigger: CCTGAAGGCGAGGGTCCTGCAGAGCTGGCCTTGTCC...GTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCGTCTCAGTATGGACTaGTCCATGTGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWARLSMD*SMWMSW
Trigger: CCAGGACATCCACATGGAGCAGTCCATACTGAGACG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCTCGCCCAGCCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPSPSLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGGCTGGGCGA...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCATGACCAGGGCCCTCTaGGGACCATTGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAMTRAL*GPLSLR
Trigger: TCTCAAAGACAATGGTCCCCAGAGGGCCCTGGTCAT...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGCCTCCGGAGTAGCTaGGACTCCAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPSLRSS*DSRCPP
Trigger: TGGCGGGCACCTGGAGTCCCAGCTACTCCGGAGGCT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGATGCCAGCTTCCACTaGGCAGGTGTCAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWDASFH*AGVSCL
Trigger: TAAGCAGCTGACACCTGCCCAGTGGAAGCTGGCATC...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR CCA 90 bp GGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCTGGACTGTGGGGGTCTaGAAGCAACCCTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGLWGSGSNPFPLEGRIPWTVGV*KQPFPL
Trigger: AAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCA...GGGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCCGTAAAGGTGGACTGTaGGGGTCTGGAAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: GGLWGSGSNPFPLEGRIPRKGGL*GSGSNP
Trigger: AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACG...GGGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTGAGCCTGGGCCATGCTaGCAGCAGCTGCAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTEPGPC*QQLQGV
Trigger: GACTCCTTGCAGCTGCTGTCAGCATGGCCCAGGCTC...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCGGTAGAGGACTTGGTTaGGCTCCCTCTTGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPGRGLG*APSWVL
Trigger: AAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACC...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCCCTCCCGTTGTTGGCTaGACTGAGGGCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSPPVVG*TEGQGS
Trigger: AGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAGG...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCCTCCCGTTGTTGGCTaGACTGAGGGCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPPPVVG*TEGQGS
Trigger: AGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAGG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCATGCTGACAGCAGCTaGAAGGAGTCGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWHADSS*KESERL
Trigger: AAGTCTCTCCGACTCCTTGCAGCTGCTGTCAGCATG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCGGACAAGGCCAGCTCTaGAGGACCCTCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSGQGQL*RTLAFR
Trigger: CCTGAAGGCGAGGGTCCTGCAGAGCTGGCCTTGTCC...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR GCA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTATTGTAGCTGCATGTTaGTGGGGCCTCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPIVAAC*WGLSAG
Trigger: CCCTGCCGAGAGGCCCCAGCAACATGCAGCTACAAT...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGTCCATGCTTTGGACTaGTCATCCATGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAVHALD*SSMSRR
Trigger: CCTTCTGGACATGGATGAGCAGTCCAAAGCATGGAC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGACAGGCGTGAGCCACTaGACCCAGTTGGGATTATGT +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWTGVSH*TQLGLC
Trigger: ACATAATCCCAACTGGGTGCAGTGGCTCACGCCTGT...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATCGCCCAGCCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPSPSLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGGCTGGGCGA...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCCACAAGGGGAGGGATaGCAGCTTCCACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPPQGEG*QLPLGR
Trigger: CCTGCCCAGTGGAAGCTGGCATCCCTCCCCTTGTGG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGCCTCTCGGCTTCTCTaGCCGGGTCAGCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPASRLL*PGQQEP
Trigger: AGGCTCCTGCTGACCCGGGCAGAGAAGCCGAGAGGC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR CCA 90 bp AGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCGGAGTCGGAGAGACTTaGCAGGTGTGCAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RCPHSQDGRKGGLWGSGSGVGET*QVCRLL
Trigger: CAGAAGCCTGCACACCTGCCAAGTCTCTCCGACTCC...GCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGCCTCTCGGCAGGGCTaGACAAGGCCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESFDPGVLILRTAVKVDCASRQG*TRPALQ
Trigger: CTGCAGAGCTGGCCTTGTCCAGCCCTGCCGAGAGGC...ACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTTCCCGTGTCCAATCTaGATGGCTTCGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAFPCPI*MASEFA
Trigger: TGCAAACTCCGAAGCCATCCAGATTGGACACGGGAA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCAAGCACGATTTCATGTaGATTCTCTGGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAKHDFM*ILWAAS
Trigger: GGAAGCCGCCCAGAGAATCCACATGAAATCGTGCTT...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCGAGGTCCCCTCCCTaGGCTCTCTTGGGTGACTTA +
Preference number: 4 (lower is better)
Translates to: HSQDGRKGGLWGSGSNPFPRSPP*ALLGDL
Trigger: TAAGTCACCCAAGAGAGCCCAGGGAGGGGACCTCGG...GAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp GATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGAGGTGGCAGGGGATGTaGGGGAGACTTTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: DPGVLILRTAVKVDCGGLRWQGM*GRLSTP
Trigger: AGGAGTTGAAAGTCTCCCTCACATCCCCTGCCACCT...CAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCGTTGTTGGCTGAACTaGGGGCCAGGGGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPRCWLN*GPGVSG
Trigger: TCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGGTGTGCAGGCTTCTaGACTGTGGCCCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPRCAGF*TVALRG
Trigger: CCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCACATGCTGACAGCAGCTaGAAGGAGTCGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: AVKVDCGGLEATLSPWRAHADSS*KESERL
Trigger: AAGTCTCTCCGACTCCTTGCAGCTGCTGTCAGCATG...TGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp GGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCGCCTCTGTCAGCACCTaGAGGATTCTTTGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GGLWGSGSNPFPLEGRIPASVST*RILCSR
Trigger: CCTTGAACAAAGAATCCTGCAGGTGCTGACAGAGGC...GGGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGACATTTTGTTGCTGTTaGCGATGGTGGCGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWTFCCC*RWWRPR
Trigger: TCGAGGACGCCACCATCGGCAACAGCAACAAAATGT...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATGCGGGACGACGACCTaGGTCCTCCCCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQCGTTT*VLPWLP
Trigger: GGGGAGCCAGGGGAGGACGCAGGTCGTCGTCCCGCA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTCATTCCTTCACCAGCTaGGCAAGTTTCACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPHSFTS*ASFTGE
Trigger: CTCCCCGGTGAAACTTGCCCAGCTGGTGAAGGAATG...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCTCATTCCCAGTGCTTaGGCGATGACCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPLIPSA*AMTRAL
Trigger: GAGGGCCCTGGTCATCGCCCAAGCACTGGGAATGAG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCTGGAAATCCAGCTGTTaGGTCCATTCTGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAWKSSC*VHSGRS
Trigger: TGATCTGCCAGAATGGACCCAACAGCTGGATTTCCA...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGGTGAGTTCCTGGACTaGGAATTCTTGCTTCAAACG +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAGEFLD*EFLLQT
Trigger: CGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAACCAGTGCTTGGGCGATaGCCAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQPVLGR*PGPSGD
Trigger: GTCCCCAGAGGGCCCTGGTCATCGCCCAAGCACTGG...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGCCAGTGCTTGGGCGATaGCCAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQPVLGR*PGPSGD
Trigger: GTCCCCAGAGGGCCCTGGTCATCGCCCAAGCACTGG...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCCAGCTCCCCTCGTGTaGGGCTTCATCCACATAGTG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPPAPLV*GFIHIV
Trigger: CACTATGTGGATGAAGCCTCACACGAGGGGAGCTGG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCCATTCCCCCAAAACTaGTTCATGCAGGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: NSRQMPRAQERVERVPWAPFPQN*FMQVMS
Trigger: AGACATAACCTGCATGAATCAGTTTTGGGGGAATGG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCACGGTCTGGATTTCCTaGCCTATTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPTVWIS*PIDPPA
Trigger: GGCGGGCGGATCAATAGGTCAGGAAATCCAGACCGT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGAGACTTGGCAGGTGTaGAGGCTTCTGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPETWQV*RLLHCG
Trigger: GCCACAGTGCAGAAGCCTGCACACCTGCCAAGTCTC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp TGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACGAGCTCCCTCTTGGGTaGTTGGCATTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: CPHSQDGRKGGLWGSGSNELPLG*LAFLHQ
Trigger: CTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTC...GTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCTGTCCTCATTCCCAGTaGTTGGGCGATGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPCPHSQ*LGDDQG
Trigger: GCCCTGGTCATCGCCCAAGCACTGGGAATGAGGACA...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGGAGCCTCATCTCATTaGTGTGTCCCAGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPGASSH*CVPAAP
Trigger: GGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCACCCCACGTGAGGCTGTaGACTAAATCCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPPHVRL*TKSHLP
Trigger: GGGGAGGTGGGATTTAGTGCACAGCCTCACGTGGGG...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTGGAGTCGGAGAGACTTaGCAGGTGTGCAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTGVGET*QVCRLL
Trigger: CAGAAGCCTGCACACCTGCCAAGTCTCTCCGACTCC...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAATTCTTTGTTCAAGGTaGCCTTCTCTGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVKVDCGGLEATLSPWRAILCSR*PSLPGS
Trigger: TGACCCGGGCAGAGAAGGCCACCTTGAACAAAGAAT...TGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTCTTCCAGAATCTTCTaGGCGGTAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWSSRIF*AVNRPC
Trigger: GCATGGACGATTTACCGCCCAGAAGATTCTGGAAGA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGCCATTGAAGGGAGGTaGCGTGGACCGGCGGAACCG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAAIEGR*RGPAEP
Trigger: CGGTTCCGCCGGTCCACGCCACCTCCCTTCAATGGC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGCTTCCCCCTCAGGGTaGGTTCCTGGACTGGGAATT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPASPSG*VPGLGI
Trigger: AATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTTGCTTCTTGCAGCTCTaGACCCACAAGGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTCFLQL*THKGRD
Trigger: ATCCCTCCCCTTGTGGGTTCAGAGCTGCAAGAAGCA...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCTTGCTGTGTCCCAGCTaGACCCGTCTCAGTATGGAC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPLLCPS*TRLSMD
Trigger: GTCCATACTGAGACGGGTGCAGCTGGGACACAGCAA...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTGGACTGGGAATTCTTaGTTCAAACGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GNSRQMPRAQERVERVPWWTGNS*FKRSFW
Trigger: CCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGGCCTCTCGGCAGGGCTaGACAAGGCCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQASRQG*TRPALQ
Trigger: CTGCAGAGCTGGCCTTGTCCAGCCCTGCCGAGAGGC...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGTAGCTGCATGTTGCTaGGGCCTCTCGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAVAACC*GLSAGL
Trigger: CAGCCCTGCCGAGAGGCCCCAGCAACATGCAGCTAC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CCA 90 bp TGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACATGACCAGGGCCCTCTaGGGACCATTGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CPHSQDGRKGGLWGSGSNMTRAL*GPLSLR
Trigger: TCTCAAAGACAATGGTCCCCAGAGGGCCCTGGTCAT...GTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCTGGAAATCCAGCTGTTaGGTCCATTCTGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPWKSSC*VHSGRS
Trigger: TGATCTGCCAGAATGGACCCAACAGCTGGATTTCCA...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCCGTGTCCAATCTGGATaGCTTCGGAGTTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RCPHSQDGRKGGLWGSGSRVQSG*LRSLQW
Trigger: CCATTGCAAACTCCGAAGCCATCCAGATTGGACACG...GCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCTTCCCGTGTCCAATCTaGATGGCTTCGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATFPCPI*MASEFA
Trigger: TGCAAACTCCGAAGCCATCCAGATTGGACACGGGAA...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATTCATGTGGATTCTCTaGGCGGCTTCCCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPFMWIL*AASPSG
Trigger: CCCTGAGGGGGAAGCCGCCCAGAGAATCCACATGAA...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATGCTGTTGCCGATGGTaGCGTCCTCGAGAAAGCACG +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPCCCRW*RPREST
Trigger: CGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCA...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCTGTTGCTGTTGCCGATaGTGGCGTCCTCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSCCCCR*WRPRES
Trigger: GCTTTCTCGAGGACGCCACCATCGGCAACAGCAACA...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCTACCCACCTCCTCTTaGCACACCAAAGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPLPTSS*HTKGSP
Trigger: TGGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AATCAGGAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGCTCCCTGGGCTCTCTTaGGTGACTTACCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: NQESFDPGVLILRTAVKVLPGLS*VTYRPP
Trigger: GGGAGGACGGTAAGTCACCCAAGAGAGCCCAGGGAG...CACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGTCTGCACTGTGGCCCTaGGAGGGTGGGCTAGGTCGA +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQSALWP*EGGLGR
Trigger: TCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGA...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGGTAGAGGACTTGGTTaGGCTCCCTCTTGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPGRGLG*APSWVL
Trigger: AAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR TCA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCGGGGACCATTGTCTTTaGGAAACCTGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPGDHCL*ETCRCL
Trigger: AAGACATCTACAGGTTTCTCAAAGACAATGGTCCCC...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGAGCTCCCTCTTGGGTaGTTGGCATTCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPELPLG*LAFLHQ
Trigger: CTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR GCA 90 bp AATCAGGAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGTGTCCTCATTCCCAGTaGTTGGGCGATGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: NQESFDPGVLILRTAVKVCPHSQ*LGDDQG
Trigger: GCCCTGGTCATCGCCCAAGCACTGGGAATGAGGACA...CACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp CATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCGTCCATGCTTTGGACTaGTCATCCATGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSQDGRKGGLWGSGSNPFVHALD*SSMSRR
Trigger: CCTTCTGGACATGGATGAGCAGTCCAAAGCATGGAC...GAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCGCGGTAAATCGTCCATaGTTTGGACTGCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATAVNRP*FGLLIH
Trigger: ATGGATGAGCAGTCCAAAGCATGGACGATTTACCGC...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCGATGGCTTCGGAGTTTaGAATGGAAATCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPDGFGV*NGNPAV
Trigger: AACAGCTGGATTTCCATTGCAAACTCCGAAGCCATC...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCGTCTCAGTATGGACTaGTCCATGTGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTRLSMD*SMWMSW
Trigger: CCAGGACATCCACATGGAGCAGTCCATACTGAGACG...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCACTGAACCCATCCCCATaGCAGGTCCATTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPLNPSP*QVHSPK
Trigger: TTTGGGGGAATGGACCTGGCATGGGGATGGGTTCAG...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTACAGGCGTGAGCCACTaGACCCAGTTGGGATTATGT +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTTGVSH*TQLGLC
Trigger: ACATAATCCCAACTGGGTGCAGTGGCTCACGCCTGT...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPRARGL*NCSCML
Trigger: CAACATGCAGCTACAATTCCAGAGACCCCTGGCCCT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGTCTTCCAGAATCTTCTaGGCGGTAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: DPGVLILRTAVKVDCGGLSSRIF*AVNRPC
Trigger: GCATGGACGATTTACCGCCCAGAAGATTCTGGAAGA...CAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGAGCCCAGGAAAGAGTaGAGAGAGTCCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAEPRKE*RESPGP
Trigger: AGGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGATCACCTGGTGCCATTaGAGGGAGGTGGCGTGGACC +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQITWCH*REVAWT
Trigger: GGTCCACGCCACCTCCCTTCAATGGCACCAGGTGAT...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAAGGTGTGCAGGCTTCTaGACTGTGGCCCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQRCAGF*TVALRG
Trigger: CCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCT...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAATTGTAGCTGCATGTTaGTGGGGCCTCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAIVAAC*WGLSAG
Trigger: CCCTGCCGAGAGGCCCCAGCAACATGCAGCTACAAT...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR GCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATGTCCTCATTCCCAGTaGTTGGGCGATGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQACPHSQ*LGDDQG
Trigger: GCCCTGGTCATCGCCCAAGCACTGGGAATGAGGACA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCTGTCCAGAAGGTGCCTaGTCTTCATCCTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: HSQDGRKGGLWGSGSNPFCPEGA*SSSCTS
Trigger: ACTTGTACAGGATGAAGAGCAGGCACCTTCTGGACA...GAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCTCCATGTCCAGAAGGTaGCTGCTCTTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSSMSRR*LLFILY
Trigger: GTACAGGATGAAGAGCAGGCACCTTCTGGACATGGA...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGTCCATGTCCAGAAGGTaGCTGCTCTTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFDPGVLILRTAVKVDCGSMSRR*LLFILY
Trigger: GTACAGGATGAAGAGCAGGCACCTTCTGGACATGGA...CCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGTCCATGCTTTGGACTaGTCATCCATGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPVHALD*SSMSRR
Trigger: CCTTCTGGACATGGATGAGCAGTCCAAAGCATGGAC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATCTGGATTGTGTGTCTaGGGGACGACGACCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQASGLCV*GTTTCV
Trigger: GACGCAGGTCGTCGTCCCGCAGACACACAATCCAGA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCCATCCACATAGTGGCTaGCTTCTGCAGCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSHPHSG*LLQLCD
Trigger: GTCACAAAGCTGCAGAAGGCAGCCACTATGTGGATG...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCAAGACGCTAAGGAATaGAGAGAGCAGCAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPQDAKE*REQQAS
Trigger: ACTAGCCTGCTGCTCTCTGCATTCCTTAGCGTCTTG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPRARGL*NCSCML
Trigger: CAACATGCAGCTACAATTCCAGAGACCCCTGGCCCT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCAAATCGTCCATGCTTTaGACTGCTCATCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATKSSML*TAHPCP
Trigger: TGGACATGGATGAGCAGTCCAAAGCATGGACGATTT...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTCTGTTGGGTCCATTCTaGCAGATCATGTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPLLGPF*QIMLIG
Trigger: TCCAATCAACATGATCTGCCAGAATGGACCCAACAG...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCGTGTCCAATCTGGATaGCTTCGGAGTTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTRVQSG*LRSLQW
Trigger: CCATTGCAAACTCCGAAGCCATCCAGATTGGACACG...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCGTGTCCAATCTGGATaGCTTCGGAGTTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPRVQSG*LRSLQW
Trigger: CCATTGCAAACTCCGAAGCCATCCAGATTGGACACG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCTTCCCGTGTCCAATCTaGATGGCTTCGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPFPCPI*MASEFA
Trigger: TGCAAACTCCGAAGCCATCCAGATTGGACACGGGAA...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATTCATGTGGATTCTCTaGGCGGCTTCCCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAFMWIL*AASPSG
Trigger: CCCTGAGGGGGAAGCCGCCCAGAGAATCCACATGAA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATGCTGTTGCCGATGGTaGCGTCCTCGAGAAAGCACG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQACCCRW*RPREST
Trigger: CGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTGAGGAAAGTGACTTCTaGATTGTGTGTCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTEESDF*IVCLRD
Trigger: GTCCCGCAGACACACAATCCAGAAGTCACTTTCCTC...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGAGCCCAGGAAAGAGTaGAGAGAGTCCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQEPRKE*RESPGP
Trigger: AGGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTC...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCTCTGGCAGATCATGTTaGTTGGATTGTGCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: VLILRTAVKVDCGGLEATSGRSC*LDCAGK
Trigger: TTTACCAGCACAATCCAATCAACATGATCTGCCAGA...GGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR TCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCACTGGGAGTGATGGGCTaGCCAATGTCTCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQALGVMG*PMSRGK
Trigger: CTTTCCTCGAGACATTGGTCAGCCCATCACTCCCAG...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGCCAGCTCCCCTCGTGTaGGGCTTCATCCACATAGTG +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQPAPLV*GFIHIV
Trigger: CACTATGTGGATGAAGCCTCACACGAGGGGAGCTGG...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATGTCCAAGCCCCACGTaGGGCTGTGCACTAAATCCC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQCPSPT*GCALNP
Trigger: GGGATTTAGTGCACAGCCTCACGTGGGGCTTGGACA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGCCTCTGTCAGCACCTaGAGGATTCTTTGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPASVST*RILCSR
Trigger: CCTTGAACAAAGAATCCTGCAGGTGCTGACAGAGGC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR GCA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTTGTCCAGAAGGTGCCTaGTCTTCATCCTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTCPEGA*SSSCTS
Trigger: ACTTGTACAGGATGAAGAGCAGGCACCTTCTGGACA...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATCCATGTCCAGAAGGTaGCTGCTCTTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPSMSRR*LLFILY
Trigger: GTACAGGATGAAGAGCAGGCACCTTCTGGACATGGA...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGGAGCCTCATCTCATTaGTGTGTCCCAGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQGASSH*CVPAAP
Trigger: GGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCC...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATAGTGGCTGCCTTCTaGAGCTTTGTGACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPIVAAF*SFVTPV
Trigger: AACAGGAGTCACAAAGCTGCAGAAGGCAGCCACTAT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAATTCTTTGTTCAAGGTaGCCTTCTCTGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPILCSR*PSLPGS
Trigger: TGACCCGGGCAGAGAAGGCCACCTTGAACAAAGAAT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CCA 90 bp AATCAGGAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: NQESFDPGVLILRTAVKVRARGL*NCSCML
Trigger: CAACATGCAGCTACAATTCCAGAGACCCCTGGCCCT...CACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCTGGAAATCCAGCTGTTaGGTCCATTCTGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPWKSSC*VHSGRS
Trigger: TGATCTGCCAGAATGGACCCAACAGCTGGATTTCCA...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCCTTCGGAGTTTGCAATaGAAATCCAGCTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPLRSLQ*KSSCWV
Trigger: GACCCAACAGCTGGATTTCCATTGCAAACTCCGAAG...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATCCATGTGGATGTCCTaGGGCCCCCAGGGATCAACT +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQSMWMS*GPQGST
Trigger: AGTTGATCCCTGGGGGCCCCAGGACATCCACATGGA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGTCCATGTGGATGTCCTaGGGCCCCCAGGGATCAACT +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQSMWMS*GPQGST
Trigger: AGTTGATCCCTGGGGGCCCCAGGACATCCACATGGA...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATTCAAACGAAGCTTCTaGGCCGGCAGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAFKRSF*AGSSGR
Trigger: TCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAAAGCACGATTTCATGTaGATTCTCTGGGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPKHDFM*ILWAAS
Trigger: GGAAGCCGCCCAGAGAATCCACATGAAATCGTGCTT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCACTACCCACCTCCTCTTaGCACACCAAAGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQALPTSS*HTKGSP
Trigger: TGGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAG...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGGGGACCATTGTCTTTaGGAAACCTGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPGDHCL*ETCRCL
Trigger: AAGACATCTACAGGTTTCTCAAAGACAATGGTCCCC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATGTCTCGAGGAAAGTaGCTTCTGGATTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPMSRGK*LLDCVS
Trigger: AGACACACAATCCAGAAGTCACTTTCCTCGAGACAT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGCTGGGAGTGATGGGCTaGCCAATGTCTCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQLGVMG*PMSRGK
Trigger: CTTTCCTCGAGACATTGGTCAGCCCATCACTCCCAG...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGCGGTAAATCGTCCATaGTTTGGACTGCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPAVNRP*FGLLIH
Trigger: ATGGATGAGCAGTCCAAAGCATGGACGATTTACCGC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATTGCTGTGTCCCAGCTaGACCCGTCTCAGTATGGAC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQLLCPS*TRLSMD
Trigger: GTCCATACTGAGACGGGTGCAGCTGGGACACAGCAA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCTGGACTGGGAATTCTTaGTTCAAACGAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSWTGNS*FKRSFW
Trigger: CCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCA...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAATAGTGGCTGCCTTCTaGAGCTTTGTGACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPIVAAF*SFVTPV
Trigger: AACAGGAGTCACAAAGCTGCAGAAGGCAGCCACTAT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAATTGTAGCTGCATGTTaGTGGGGCCTCTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAIVAAC*WGLSAS
Trigger: AGAAGCCGAGAGGCCCCAGCAACATGCAGCTACAAT...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAACATTCCTTCACCAGCTaGGCAAGTTTCACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQHSFTS*ASFTGE
Trigger: CTCCCCGGTGAAACTTGCCCAGCTGGTGAAGGAATG...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CCA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCCTGTTGGGTCCATTCTaGCAGATCATGTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSLLGPF*QIMLIG
Trigger: TCCAATCAACATGATCTGCCAGAATGGACCCAACAG...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCACTTCGGAGTTTGCAATaGAAATCCAGCTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPLRSLQ*KSSCWV
Trigger: GACCCAACAGCTGGATTTCCATTGCAAACTCCGAAG...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATTCAAACGAAGCTTCTaGGCCGGCAGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQFKRSF*AGSSGR
Trigger: TCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATGGGCCAGCCACCCCTaGGCTGATAGACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAWASHP*ADRHFV
Trigger: AACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAATGTCTCGAGGAAAGTaGCTTCTGGATTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPMSRGK*LLDCVS
Trigger: AGACACACAATCCAGAAGTCACTTTCCTCGAGACAT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGATGGCTTCGGAGTTTaGAATGGAAATCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPDGFGV*NGNPAV
Trigger: AACAGCTGGATTTCCATTGCAAACTCCGAAGCCATC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAATGACCAGGGCCCTCTaGGGACCATTGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQMTRAL*GPLSLR
Trigger: TCTCAAAGACAATGGTCCCCAGAGGGCCCTGGTCAT...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAAAATCGTCCATGCTTTaGACTGCTCATCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPKSSML*TAHPCP
Trigger: TGGACATGGATGAGCAGTCCAAAGCATGGACGATTT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp AATCAGGAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGCTTCGGAGTTTGCAATaGAAATCCAGCTGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: NQESFDPGVLILRTAVKVLRSLQ*KSSCWV
Trigger: GACCCAACAGCTGGATTTCCATTGCAAACTCCGAAG...CACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGTGGGCCAGCCACCCCTaGGCTGATAGACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQWASHP*ADRHFV
Trigger: AACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCA...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGACATTTTGTTGCTGTTaGCGATGGTGGCGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQTFCCC*RWWRPR
Trigger: TCGAGGACGCCACCATCGGCAACAGCAACAAAATGT...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGGTGAGTTCCTGGACTaGGAATTCTTGCTTCAAACG +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAGEFLD*EFLLQT
Trigger: CGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGGCGGTAAATCGTCCATaGTTTGGACTGCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQAVNRP*FGLLIH
Trigger: ATGGATGAGCAGTCCAAAGCATGGACGATTTACCGC...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATCTTCCAGAATCTTCTaGGCGGTAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQSSRIF*AVNRPC
Trigger: GCATGGACGATTTACCGCCCAGAAGATTCTGGAAGA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCACTGTTGGGTCCATTCTaGCAGATCATGTTGATTGGA +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQALLGPF*QIMLIG
Trigger: TCCAATCAACATGATCTGCCAGAATGGACCCAACAG...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCACATGCAGGTTATGTCTaGAAGCAAGCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAHAGYV*KQAGQT
Trigger: TGTTTGACCTGCTTGCTTCCAGACATAACCTGCATG...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGGGGACCATTGTCTTTaGGAAACCTGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQGDHCL*ETCRCL
Trigger: AAGACATCTACAGGTTTCTCAAAGACAATGGTCCCC...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCATCTGGCAGATCATGTTaGTTGGATTGTGCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQASGRSC*LDCAGK
Trigger: TTTACCAGCACAATCCAATCAACATGATCTGCCAGA...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR GCA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGGATGGCTTCGGAGTTTaGAATGGAAATCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQDGFGV*NGNPAV
Trigger: AACAGCTGGATTTCCATTGCAAACTCCGAAGCCATC...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAAAATCGTCCATGCTTTaGACTGCTCATCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQKSSML*TAHPCP
Trigger: TGGACATGGATGAGCAGTCCAAAGCATGGACGATTT...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR TCA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAATCTGGCAGATCATGTTaGTTGGATTGTGCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQSGRSC*LDCAGK
Trigger: TTTACCAGCACAATCCAATCAACATGATCTGCCAGA...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp GCAGGGGGACCTGGGAGCGCAAAGGCAAGTCCTGCCTGGGACGCCTaGCTGGGTTTACCTGATGCCCATCGCCATCCTCCCCGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: AGGPGSAKASPAWDA*LGLPDAHRHPPREC
Trigger: GCACTCCCGGGGAGGATGGCGATGGGCATCAGGTAAACCCAGGCAGGCGTCCCAGGCAGGACTTGCCTTTGCGCTCCCAGGTCCCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 90 bp GGGGACCTGGGAGCGCAAAGGCAAGTCCTGCCTGGGACGCCTGCCTaGGTTTACCTGATGCCCATCGCCATCCTCCCCGGGAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: GDLGAQRQVLPGTPA*VYLMPIAILPGSAL
Trigger: GAGGGCACTCCCGGGGAGGATGGCGATGGGCATCAGGTAAACCCAGGCAGGCGTCCCAGGCAGGACTTGCCTTTGCGCTCCCAGGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 90 bp CATTGCCAGGATGCTCCCTGCAGGGTCAGACCCGCCTCCCCGGGGTaGCAGTTACCAGGGCTGGACAAGGCCAGCTCTGCAGGACCCTCG +
Preference number: 5 (lower is better)
Translates to: HCQDAPCRVRPASPG*QLPGLDKASSAGPS
Trigger: CGAGGGTCCTGCAGAGCTGGCCTTGTCCAGCCCTGGTAACTGCCACCCCGGGGAGGCGGGTCTGACCCTGCAGGGAGCATCCTGGCAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 90 bp CCGTTGGCCCGCCAGCTCCAGTCAGGTACCCTCCAGATCTGGCTCTaGCAACCACCCAGCTTGGCCTGCACCTGCCCCCAACTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PLARQLQSGTLQIWL*QPPSLACTCPQLPS
Trigger: GGAGGGAAGTTGGGGGCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGATCTGGAGGGTACCTGACTGGAGCTGGCGGGCCAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS TCA 90 bp GAGCGCAAAGGCAAGTCCTGCCTGGGACGCCTGCCTGGGTTTACCTaGTGCCCATCGCCATCCTCCCCGGGAGTGCCCTCCTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ERKGKSCLGRLPGFT*CPSPSSPGVPSSQL
Trigger: GAGCTGAGAGGAGGGCACTCCCGGGGAGGATGGCGATGGGCATCAGGTAAACCCAGGCAGGCGTCCCAGGCAGGACTTGCCTTTGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 90 bp TGCATGTTGCTGGGGCCTCTCGGCAGGGCTGGACAAGGCCAGCTCTaGAGGACCCTCGCCTTCAGGATCAGTCCCGCCCAAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: CMLLGPLGRAGQGQL*RTLAFRISPAQAPG
Trigger: ACCTGGTGCTTGGGCGGGACTGATCCTGAAGGCGAGGGTCCTGCAGAGCTGGCCTTGTCCAGCCCTGCCGAGAGGCCCCAGCAACATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000538947.5
ENST00000541799.1
CDS CCA 90 bp AGACTTGGCAGGTGTGCAGGCTTCTGCACTGTGGCCCTGAGAGGGTaGGCTAGGTCGAGGCTGGGGCTTCTGAAGTGGCCGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RLGRCAGFCTVALRG*ARSRLGLLKWPSLV
Trigger: CACCAGGCTCGGCCACTTCAGAAGCCCCAGCCTCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCTGCCAAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000432548.2
ENST00000480037.1
ENST00000538947.5
ENST00000546110.5
CDS CCA 90 bp GGCCGGCAGCAGTGGCAGAGACTCCGCTCGTGCTGTTGTGCTGTCTaGGAAGCGTCTTTCTGCTCCACTGATCCCGCAGTGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: GRQQWQRLRSCCCAV*EASFCSTDPAVGLP
Trigger: GGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGACAGCACAACAGCACGAGCGGAGTCTCTGCCACTGCTGCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 90 bp AGCAGCTGCAAGGAGTCGGAGAGACTTGGCAGGTGTGCAGGCTTCTaGACTGTGGCCCTGAGAGGGTGGGCTAGGTCGAGGCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSCKESERLGRCAGF*TVALRGWARSRLGL
Trigger: AAGCCCCAGCCTCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCTGCCAAGTCTCTCCGACTCCTTGCAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000432548.2
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
ENST00000546110.5
CDS GCA 90 bp TGTGGGCAGGGCCCTCGGACGGGACGCCGTGGAGCCTCATCTCATTaGTGTGTCCCAGCTGCACCCGTCTCAGTATGGACTGCTCCATGT +
Preference number: 5 (lower is better)
Translates to: CGQGPRTGRRGASSH*CVPAAPVSVWTAPC
Trigger: ACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCCACGGCGTCCCGTCCGAGGGCCCTGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 90 bp CCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTGGAATTGTAGCTaGATGTTGCTGGGGCCTCTCGGCAGGGCTGGACAAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PLLAELRARGLWNCS*MLLGPLGRAGQGQL
Trigger: GAGCTGGCCTTGTCCAGCCCTGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000538947.5
ENST00000541799.1
CDS GCA 90 bp TCGGACGGGACGCCGTGGAGCCTCATCTCATTGCTGTGTCCCAGCTaGACCCGTCTCAGTATGGACTGCTCCATGTGGATGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SDGTPWSLISLLCPS*TRLSMDCSMWMSWG
Trigger: GCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCCACGGCGTCCCGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 90 bp CCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTGGAATTGTAGCTaGATGTTGCTGGGGCCTCTCGGCTTCTCTGCCCGGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLLAELRARGLWNCS*MLLGPLGFSARVSR
Trigger: CCTGCTGACCCGGGCAGAGAAGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395822.7
ENST00000546110.5
CDS GCA 90 bp CACTTGACTTCAAATCCTGCCTGCGCCCTGGCAGCTGCGGCTTCCTaGCGATTAACTTCTCCGGGGCTCAGCCTCCTTTGCCTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: HLTSNPACALAAAAS*RLTSPGLSLLCLLG
Trigger: CCCCAGGAGGCAAAGGAGGCTGAGCCCCGGAGAAGTTAATCGGCAGGAAGCCGCAGCTGCCAGGGCGCAGGCAGGATTTGAAGTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 90 bp CTGTCTGGGAAGCGTCTTTCTGCTCCACTGATCCCGCAGTGGGTCTaGCCCACTGATCCCGCCCGGCTGATCTGGACGTCAGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSGKRLSAPLIPQWV*PTDPARLIWTSVSS
Trigger: GGAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 90 bp CTGATCCCGCAGTGGGTCTGCCCCACTGATCCCGCCCGGCTGATCTaGACGTCAGTGTCTTCCTCTGGGATTCAGCTCCTCTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LIPQWVCPTDPARLI*TSVSSSGIQLLSPL
Trigger: CAGAGGAGAGAGGAGCTGAATCCCAGAGGAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 90 bp GTTGTGCTGTCTGGGAAGCGTCTTTCTGCTCCACTGATCCCGCAGTaGGTCTGCCCCACTGATCCCGCCCGGCTGATCTGGACGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VVLSGKRLSAPLIPQ*VCPTDPARLIWTSV
Trigger: CACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGACAGCACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS-3UTR CAA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGATGTCTTCCTCCCGTaGTTGGCTGAACTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: NSRQMPRAQERVERVPWADVFLP*LAELRA
Trigger: GGCCCTCAGTTCAGCCAACAACGGGAGGAAGACATC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCCTCCCTGGGCTCTCTaGGGTGACTTACCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPPPWAL*GDLPSS
Trigger: GGAGGACGGTAAGTCACCCAAGAGAGCCCAGGGAGG...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS TCA 90 bp GAAGCGTCTTTCTGCTCCACTGATCCCGCAGTGGGTCTGCCCCACTaGTCCCGCCCGGCTGATCTGGACGTCAGTGTCTTCCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EASFCSTDPAVGLPH*SRPADLDVSVFLWD
Trigger: ATCCCAGAGGAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 90 bp CTGGGCGGCTTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTTaGTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGGCAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: LGGFPLRVSSWTGNS*FKRSFWAGSSGRDW
Trigger: CCAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp GCAGAGTTCAGATTCGAACCCAGGCTCAAATCTGTGCTTGTCCATTaGCAGGATGCTCCCTGCAGGGTCAGACCCGCCTCCCCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AEFRFEPRLKSVLVH*QDAPCRVRPASPGW
Trigger: CCACCCCGGGGAGGCGGGTCTGACCCTGCAGGGAGCATCCTGGCAATGGACAAGCACAGATTTGAGCCTGGGTTCGAATCTGAACTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 90 bp CTGGGCGGCTTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTTaGTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGGCAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: LGGFPLRVSSWTGNS*FKRSFWAGSSGRDS
Trigger: GGAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS-3UTR CAA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGAATCACCTGGTGCCATaGAAGGGAGGTGGCGTGGAC +
Preference number: 5 (lower is better)
Translates to: GNSRQMPRAQERVERVPWNHLVP*KGGGVD
Trigger: GTCCACGCCACCTCCCTTCAATGGCACCAGGTGATT...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGCTAGGGTCCCCCAAGTaGAGGAATCACCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GNSRQMPRAQERVERVPWLGSPK*RNHLVP
Trigger: TGGCACCAGGTGATTCCTCAACTTGGGGGACCCTAG...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp GGTAACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGTCTACCCACCTCCTCTaGGCACACCAAAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GNSRQMPRAQERVERVPWSTHLL*AHQRFP
Trigger: GGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAGA...CCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS CCA 90 bp ACTTGGTTGAGCTCCCTCTTGGGTGCTTGGCATTCCTTCACCAGCTaGGCAAGTTTCACCGGGGAGCCAGCCTCTGTCAGCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TWLSSLLGAWHSFTS*ASFTGEPASVSTCR
Trigger: CCTGCAGGTGCTGACAGAGGCTGGCTCCCCGGTGAAACTTGCCCAGCTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTCAACCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS CCA 90 bp GATGTCTTCCTCCCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTGCTGGGGCCTCTCGGCAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: DVFLPLLAELRARGL*NCSCMLLGPLGRAG
Trigger: TCCAGCCCTGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAGGAAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000538947.5
ENST00000541799.1
CDS CCA 90 bp CCCAGCTGCACCCGTCTCAGTATGGACTGCTCCATGTGGATGTCCTaGGGCCCCCAGGGATCAACTAGGGTCCCCCAAGTTGAGGAATCA +
Preference number: 5 (lower is better)
Translates to: PSCTRLSMDCSMWMS*GPQGSTRVPQVEES
Trigger: TGATTCCTCAACTTGGGGGACCCTAGTTGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 90 bp GGTTTCCTCATCCCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTGCTGGGGCCTCTCGGCAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GFLIPLLAELRARGL*NCSCMLLGPLGRAG
Trigger: TCCAGCCCTGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGGGATGAGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432548.2
CDS CCA 90 bp CCATCCTCCCCGGGAGTGCCCTCCTCTCAGCTCACCATCCATCCATaGCGCCACTATCCATCCAAGCCAGAGACCGACCAGACATCAGAA +
Preference number: 5 (lower is better)
Translates to: PSSPGVPSSQLTIHP*RHYPSKPETDQTSE
Trigger: TTCTGATGTCTGGTCGGTCTCTGGCTTGGATGGATAGTGGCGCCATGGATGGATGGTGAGCTGAGAGGAGGGCACTCCCGGGGAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 90 bp CTCATCTCATTGCTGTGTCCCAGCTGCACCCGTCTCAGTATGGACTaGTCCATGTGGATGTCCTGGGGCCCCCAGGGATCAACTAGGGTC +
Preference number: 5 (lower is better)
Translates to: LISLLCPSCTRLSMD*SMWMSWGPQGSTRV
Trigger: GACCCTAGTTGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 90 bp GGAGCCTCATCTCATTGCTGTGTCCCAGCTGCACCCGTCTCAGTATaGACTGCTCCATGTGGATGTCCTGGGGCCCCCAGGGATCAACTA +
Preference number: 5 (lower is better)
Translates to: GASSHCCVPAAPVSV*TAPCGCPGAPRDQL
Trigger: TAGTTGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS-3UTR CAA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCCACCTGCAGGATTCTTaGTTCAAGGTGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NSRQMPRAQERVERVPWAHLQDS*FKVAFS
Trigger: AGAGAAGGCCACCTTGAACAAAGAATCCTGCAGGTG...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CAA 90 bp AGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCGATGTCTTCCTCCCGTaGTTGGCTGAACTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RCPHSQDGRKGGLWGSGSDVFLP*LAELRA
Trigger: GGCCCTCAGTTCAGCCAACAACGGGAGGAAGACATC...GCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp AACTCCAGGCAGATGCCCCGAGCCCAGGAAAGAGTGGAGAGAGTCCCCTGGGCCGGATGGCTTCGGAGTTaGCAATGGAAATCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: NSRQMPRAQERVERVPWAGWLRS*QWKSSC
Trigger: ACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCC...GGCCCAGGGGACTCTCTCCACTCTTTCCTGGGCTCGGGGCATCTGCCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS CCA 90 bp AGGGTGAGTTCCTGGACTGGGAATTCTTGCTTCAAACGAAGCTTCTaGGCCGGCAGCAGTGGCAGAGACTCCGCTCGTGCTGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RVSSWTGNSCFKRSF*AGSSGRDSARAVVL
Trigger: CAGCACAACAGCACGAGCGGAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 90 bp CAGGATTCTTTGTTCAAGGTGGCCCCGGGAGCTACCGCTGGTCCTTaGAAGGAAGAAGTACTGTACCTTCTCTGCCCGGGTCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QDSLFKVAPGATAGP*KEEVLYLLCPGQQE
Trigger: CTCCTGCTGACCCGGGCAGAGAAGGTACAGTACTTCTTCCTTCCAAGGACCAGCGGTAGCTCCCGGGGCCACCTTGAACAAAGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538947.5
CDS-3UTR CAA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGGATTTCCTGACCTATaGATCCGCCCGCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPGFPDL*IRPPRP
Trigger: AGGCCGAGGCGGGCGGATCAATAGGTCAGGAAATCC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS TCA 90 bp GACGCAGGGCCTCCTCTCAGCAACCCCTACCAAGCAGCCCTGCTGTaGGCTCCATCAACCAGAAAAAGAAACCAAGGCACAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DAGPPLSNPYQAALL*APSTRKRNQGTERG
Trigger: TCCTCTCTCTGTGCCTTGGTTTCTTTTTCTGGTTGATGGAGCTCACAGCAGGGCTGCTTGGTAGGGGTTGCTGAGAGGAGGCCCTGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 90 bp CAAGCCAGAGACCGACCAGACATCAGAAACAGACCTTTCCCCCAGTaGCCAGTCGTGGAGCCCTGGAAATGCCATTCCTGGATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QARDRPDIRNRPFPQ*PVVEPWKCHSWILW
Trigger: CCAGAGAATCCAGGAATGGCATTTCCAGGGCTCCACGACTGGGCACTGGGGGAAAGGTCTGTTTCTGATGTCTGGTCGGTCTCTGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 90 bp CCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTGGAATTGTAGCTaGATGTTGCTGGGGCCTCTCGGCTGCAGAAAGAAAGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: PLLAELRARGLWNCS*MLLGPLGCRKKDGS
Trigger: TGACCCATCTTTCTTTCTGCAGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CCA 90 bp TTTCATGTGGATTCTCTGGGCGGCTTCCCCCTCAGGGTGAGTTCCTaGACTGGGAATTCTTGCTTCAAACGAAGCTTCTGGGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: FHVDSLGGFPLRVSS*TGNSCFKRSFWAGS
Trigger: GCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAGAGAATCCACATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS-3UTR CAA 90 bp AGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGAATCCCCACCTGCAGGATTCTTaGTTCAAGGTGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RWTVGVWKQPFPLGGQNPHLQDS*FKVAFS
Trigger: AGAGAAGGCCACCTTGAACAAAGAATCCTGCAGGTG...GGGATTCTGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCAATTGTAGCTGCATGTaGCTGGGGCCTCTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSNCSCM*LGPLGR
Trigger: CCTGCCGAGAGGCCCCAGCAACATGCAGCTACAATT...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CAA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAGTCTTCCTCCCGTTGTaGGCTGAACTGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPVFLPL*AELRAR
Trigger: CCTGGCCCTCAGTTCAGCCAACAACGGGAGGAAGAC...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCGATGTCTTCCTCCCGTaGTTGGCTGAACTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPDVFLP*LAELRA
Trigger: GGCCCTCAGTTCAGCCAACAACGGGAGGAAGACATC...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp GCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCCCCTTGGAGGGCAGGATGGCTTCGGAGTTaGCAATGGAAATCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AVKVDCGGLEATLSPWRAGWLRS*QWKSSC
Trigger: ACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCC...TGCCCTCCAAGGGGAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCTCTACCCACCTCCTCTaGGCACACCAAAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSSTHLL*AHQRFP
Trigger: GGGGAACCTTTGGTGTGCCAAGAGGAGGTGGGTAGA...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp CTCCTTTTTCATTCGGTAGAGGACTTGGTTGAGCTCCCTCTTGGGTaGTTGGCATTCCTTCACCAGCTGGGCAAGTTTCACCGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLFHSVEDLVELPLG*LAFLHQLGKFHRGA
Trigger: GGCTCCCCGGTGAAACTTGCCCAGCTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACCGAATGAAAAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS-3UTR CAA 90 bp AATCAGGAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGTCTTCCTCCCGTTGTaGGCTGAACTGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NQESFDPGVLILRTAVKVVFLPL*AELRAR
Trigger: CCTGGCCCTCAGTTCAGCCAACAACGGGAGGAAGAC...CACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTGACATTTTGTTGCTGTaGCCGATGGTGGCGTCCTCG +
Preference number: 5 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTDILLL*PMVASS
Trigger: CGAGGACGCCACCATCGGCAACAGCAACAAAATGTC...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCGACATTTTGTTGCTGTaGCCGATGGTGGCGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSDILLL*PMVASS
Trigger: CGAGGACGCCACCATCGGCAACAGCAACAAAATGTC...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp CCTGTACAAGTCTCGGTTCACATCTTTTGCTGTCCTCATTCCCAGTaGTTGGGCGATGACCAGGGCCCTCTGGGGACCATTGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: PVQVSVHIFCCPHSQ*LGDDQGPLGTIVFE
Trigger: CTCAAAGACAATGGTCCCCAGAGGGCCCTGGTCATCGCCCAAGCACTGGGAATGAGGACAGCAAAAGATGTGAACCGAGACTTGTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
ENST00000546110.5
CDS GCA 90 bp AAGGTGCCTGCTCTTCATCCTGTACAAGTCTCGGTTCACATCTTTTaGTGTCCTCATTCCCAGTGCTTGGGCGATGACCAGGGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: KVPALHPVQVSVHIF*CPHSQCLGDDQGPL
Trigger: CAGAGGGCCCTGGTCATCGCCCAAGCACTGGGAATGAGGACAGCAAAAGATGTGAACCGAGACTTGTACAGGATGAAGAGCAGGCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
ENST00000546110.5
CDS CCA 90 bp ATTATAATTGTTAGTGTTCTGCAGAGTACCTCCTGTGTGCAGGGCTaGGCTGAGCCTGACGCAGGGCCTCCTCTCAGCAACCCCTACCAA +
Preference number: 5 (lower is better)
Translates to: IIIVSVLQSTSCVQG*AEPDAGPPLSNPYQ
Trigger: TTGGTAGGGGTTGCTGAGAGGAGGCCCTGCGTCAGGCTCAGCCCAGCCCTGCACACAGGAGGTACTCTGCAGAACACTAACAATTATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS-3UTR CAA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCACATTCGGTAGAGGACTaGGTTGAGCTCCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPHSVED*VELPLG
Trigger: CCCAAGAGGGAGCTCAACCAAGTCCTCTACCGAATG...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371173.8
CDS-3UTR CAA 90 bp GAGAGCTTTGATCCAGGTGTCCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTCATTCGGTAGAGGACTaGGTTGAGCTCCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: ESFDPGVLILRTAVKVDCHSVED*VELPLG
Trigger: CCCAAGAGGGAGCTCAACCAAGTCCTCTACCGAATG...ACAGTCCACCTTTACGGCCGTCCTGAGAATGAGGACACCTGGATCAAAGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGTCTTCCTCCCGTTGTaGGCTGAACTGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAVFLPL*AELRAR
Trigger: CCTGGCCCTCAGTTCAGCCAACAACGGGAGGAAGAC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp CATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTTTCATGGAAATCCAGCTGTaGGGTCCATTCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: HSQDGRKGGLWGSGSNPFMEIQL*GPFWQI
Trigger: GATCTGCCAGAATGGACCCAACAGCTGGATTTCCAT...GAAAGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS-3UTR CAA 90 bp CCACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTAAAGTGACTTCTGGATaGTGTGTCTGCGGGACGACG +
Preference number: 5 (lower is better)
Translates to: PPPLGTPKVPQGNSLSSTKVTSG*CVCGTT
Trigger: CGTCGTCCCGCAGACACACAATCCAGAAGTCACTTT...AGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCAGGATTTCCTGACCTATaGATCCGCCCGCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQAGFPDL*IRPPRP
Trigger: AGGCCGAGGCGGGCGGATCAATAGGTCAGGAAATCC...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp CCTCATTCTCAGGACGGCCGTAAAGGTGGACTGTGGGGGTCTGGAAGCAACCCTGAAATCAGGAGAGCTTaGATCCAGGTGTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: PHSQDGRKGGLWGSGSNPEIRRA*IQVSSF
Trigger: GAATGAGGACACCTGGATCAAAGCTCTCCTGATTTC...AGGGTTGCTTCCAGACCCCCACAGTCCACCTTTACGGCCGTCCTGAGAATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541799.1
CDS TCA 90 bp AAGCACGATTTCATGTGGATTCTCTGGGCGGCTTCCCCCTCAGGGTaGGTTCCTGGACTGGGAATTCTTGCTTCAAACGAAGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: KHDFMWILWAASPSG*VPGLGILASNEASG
Trigger: CCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAGAGAATCCACATGAAATCGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 90 bp AGCTTCCACTGGGCAGGTGTCAGCTGCTTACAGCCCGGAAATAGATaGCTAGCCAGGCCGGCCAGATTCGGTTTCAGGAGAAAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: SFHWAGVSCLQPGNR*LARPARFGFRRKRK
Trigger: TTTTCTTTTTCTCCTGAAACCGAATCTGGCCGGCCTGGCTAGGCATCTATTTCCGGGCTGTAAGCAGCTGACACCTGCCCAGTGGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS GCA 90 bp TTGCAAACTCAGACTCCAGAGTTCAACACACTTGACTTCAAATCCTaGCTGCGCCCTGGCAGCTGCGGCTTCCTGCCGATTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LQTQTPEFNTLDFKS*LRPGSCGFLPINFS
Trigger: GGAGAAGTTAATCGGCAGGAAGCCGCAGCTGCCAGGGCGCAGGCAGGATTTGAAGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS-3UTR CAA 90 bp CAAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCATGGAAATCCAGCTGTaGGGTCCATTCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: QGNSLSSTPGHQKTWPEPMEIQL*GPFWQI
Trigger: GATCTGCCAGAATGGACCCAACAGCTGGATTTCCAT...GGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCGGATGGCTTCGGAGTTaGCAATGGAAATCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSGWLRS*QWKSSC
Trigger: ACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCC...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp GCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAAGCACTAGGGTCCCCCAAGTaGAGGAATCACCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ARSIPPKLIHAGYVWKQALGSPK*RNHLVP
Trigger: TGGCACCAGGTGATTCCTCAACTTGGGGGACCCTAG...TGCTTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCGGGCTGATAGACATTTaGTTGCTGTTGCCGATGGTG +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSGLIDI*LLLPMV
Trigger: CACCATCGGCAACAGCAACAAAATGTCTATCAGCCC...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp AAGGCAACTCCCTGTCATCTACTCCTGGCCATCAAAAGACCTGGCCTGAACCCAATGGAAATCCAGCTGTaGGGTCCATTCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: KATPCHLLLAIKRPGLNPMEIQL*GPFWQI
Trigger: GATCTGCCAGAATGGACCCAACAGCTGGATTTCCAT...TGGGTTCAGGCCAGGTCTTTTGATGGCCAGGAGTAGATGACAGGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGAATCACCTGGTGCCATaGAAGGGAGGTGGCGTGGAC +
Preference number: 5 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQNHLVP*KGGGVD
Trigger: GTCCACGCCACCTCCCTTCAATGGCACCAGGTGATT...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACCTCCTCTTGGCACACCAAAGGTTCCCCAAGGCAACTCCCTGTCATCTACTCCCTGGACTGGGAATTCTaGCTTCAAACGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TSSWHTKGSPRQLPVIYSLDWEF*LQTKLL
Trigger: CAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAG...GGAGTAGATGACAGGGAGTTGCCTTGGGGAACCTTTGGTGTGCCAAGAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGGTCATAGTTTCCAGCTaGGGGGTGAGCTTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQVIVSS*GVSFEW
Trigger: CCACTCGAAGCTCACCCCCAAGCTGGAAACTATGAC...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGAATTGTAGCTGCATGTaGCTGGGGCCTCTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQNCSCM*LGPLGF
Trigger: GAAGCCGAGAGGCCCCAGCAACATGCAGCTACAATT...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS GCA 90 bp ACAAAGGTGGGCAGCTCCCTAGGGGTAAGTGGCAATGCCGGTAGTTaGAAACTCAGACTCCAGAGTTCAACACACTTGACTTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: TKVGSSLGVSGNAGS*KLRLQSSTHLTSNP
Trigger: AGGATTTGAAGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAACTACCGGCATTGCCACTTACCCCTAGGGAGCTGCCCACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CCA 90 bp TTGCTCTTCTTCCAGAATCTTCTGGGCGGTAAATCGTCCATGCTTTaGACTGCTCATCCATGTCCAGAAGGTGCCTGCTCTTCATCCTGT +
Preference number: 5 (lower is better)
Translates to: LLFFQNLLGGKSSML*TAHPCPEGACSSSC
Trigger: ACAGGATGAAGAGCAGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCATGGACGATTTACCGCCCAGAAGATTCTGGAAGAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS CCA 90 bp TCCCTGGAGACTGTCTGTCTTGTAATGATGTTCCCGTGTCCAATCTaGATGGCTTCGGAGTTTGCAATGGAAATCCAGCTGTTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: SLETVCLVMMFPCPI*MASEFAMEIQLLGP
Trigger: TGGACCCAACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCCAGATTGGACACGGGAACATCATTACAAGACAGACAGTCTCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGAAAGTGACTTCTGGATaGTGTGTCTGCGGGACGACG +
Preference number: 5 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQKVTSG*CVCGTT
Trigger: CGTCGTCCCGCAGACACACAATCCAGAAGTCACTTT...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp AAATCGTCCATGCTTTGGACTGCTCATCCATGTCCAGAAGGTGCCTaGTCTTCATCCTGTACAAGTCTCGGTTCACATCTTTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KSSMLWTAHPCPEGA*SSSCTSLGSHLLLS
Trigger: GGACAGCAAAAGATGTGAACCGAGACTTGTACAGGATGAAGAGCAGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCATGGACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS-3UTR CAA 90 bp ACTCAAACATTCAAACCACAGCAGGTAGCCATGATGGAAGGTAACTCCAGGCAGGGGCTGATAGACATTTaGTTGCTGTTGCCGATGGTG +
Preference number: 5 (lower is better)
Translates to: TQTFKPQQVAMMEGNSRQGLIDI*LLLPMV
Trigger: CACCATCGGCAACAGCAACAAAATGTCTATCAGCCC...CTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTGAATGTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS-3UTR CAA 90 bp CATGCCAGGTCCATTCCCCCAAAACTGATTCATGCAGGTTATGTCTGGAAGCAACTGGACTGGGAATTCTaGCTTCAAACGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: HARSIPPKLIHAGYVWKQLDWEF*LQTKLL
Trigger: CAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAG...TTGCTTCCAGACATAACCTGCATGAATCAGTTTTGGGGGAATGGACCTGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS GCA 90 bp TCTTGTAATGATGTTCCCGTGTCCAATCTGGATGGCTTCGGAGTTTaGAATGGAAATCCAGCTGTTGGGTCCATTCTGGCAGATCATGTT +
Preference number: 5 (lower is better)
Translates to: SCNDVPVSNLDGFGV*NGNPAVGSILADHV
Trigger: AACATGATCTGCCAGAATGGACCCAACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCCAGATTGGACACGGGAACATCATTACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS CCA 90 bp TGTGATTCATGGGAGGAGGTCAAACTATCAACATTCACAGGAGTCTaGAAGAAGTTGATTCCAAATTTCATGAATGACTTTGAGGGGTTC +
Preference number: 5 (lower is better)
Translates to: CDSWEEVKLSTFTGV*KKLIPNFMNDFEGF
Trigger: GAACCCCTCAAAGTCATTCATGAAATTTGGAATCAACTTCTTCCAGACTCCTGTGAATGTTGATAGTTTGACCTCCTCCCATGAATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453793.1
CDS TCA 72 bp GGCAAGTCCTGCCTGGGACGCCTGCCTGGGTTTACCTaGTGCCCATCGCCATCCTCCCCGGGAGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: GKSCLGRLPGFT*CPSPSSPGVPS
Trigger: GGAGGGCACTCCCGGGGAGGATGGCGATGGGCATCAGGTAAACCCAGGCAGGCGTCCCAGGCAGGACTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp GGAGCGCAAAGGCAAGTCCTGCCTGGGACGCCTGCCTaGGTTTACCTGATGCCCATCGCCATCCTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: GAQRQVLPGTPA*VYLMPIAILPG
Trigger: CCCGGGGAGGATGGCGATGGGCATCAGGTAAACCCAGGCAGGCGTCCCAGGCAGGACTTGCCTTTGCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp CGCCAGCTCCAGTCAGGTACCCTCCAGATCTGGCTCTaGCAACCACCCAGCTTGGCCTGCACCTGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: RQLQSGTLQIWL*QPPSLACTCPQ
Trigger: TTGGGGGCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGATCTGGAGGGTACCTGACTGGAGCTGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp AGGTGTGCAGGCTTCTGCACTGTGGCCCTGAGAGGGTaGGCTAGGTCGAGGCTGGGGCTTCTGAAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: RCAGFCTVALRG*ARSRLGLLKWP
Trigger: CGGCCACTTCAGAAGCCCCAGCCTCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000432548.2
ENST00000480037.1
ENST00000538947.5
ENST00000546110.5
CDS CCA 72 bp TTGGCCCGCCAGCTCCAGTCAGGTACCCTCCAGATCTaGCTCTGCCAACCACCCAGCTTGGCCTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: LARQLQSGTLQI*LCQPPSLACTC
Trigger: GCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGATCTGGAGGGTACCTGACTGGAGCTGGCGGGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS TCA 72 bp TCCCGCAGTGGGTCTGCCCCACTGATCCCGCCCGGCTaGTCTGGACGTCAGTGTCTTCCTCTGGGATTCAGC +
Preference number: 6 (lower is better)
Translates to: SRSGSAPLIPPG*SGRQCLPLGFS
Trigger: GCTGAATCCCAGAGGAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp GGCCCTCGGACGGGACGCCGTGGAGCCTCATCTCATTaGTGTGTCCCAGCTGCACCCGTCTCAGTATGGACT +
Preference number: 6 (lower is better)
Translates to: GPRTGRRGASSH*CVPAAPVSVWT
Trigger: AGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCCACGGCGTCCCGTCCGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 72 bp GTCCAGGGCAGAGGAAAGGGCAAGGACCCCAGCAGATaGCCCCTAAGAGCAGTAGGGCAGCTGCATCTGCCC +
Preference number: 6 (lower is better)
Translates to: VQGRGKGKDPSR*PLRAVGQLHLP
Trigger: GGGCAGATGCAGCTGCCCTACTGCTCTTAGGGGGCATCTGCTGGGGTCCTTGCCCTTTCCTCTGCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp GGGCCAGGGGTCTCTGGAATTGTAGCTGCATGTTGCTaGGGCCTCTCGGCTTCTCTGCCCGGGTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GPGVSGIVAACC*GLSASLPGSAG
Trigger: TCCTGCTGACCCGGGCAGAGAAGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395822.7
ENST00000546110.5
CDS CCA 72 bp TCTGGGAAGCGTCTTTCTGCTCCACTGATCCCGCAGTaGGTCTGCCCCACTGATCCCGCCCGGCTGATCTGG +
Preference number: 6 (lower is better)
Translates to: SGKRLSAPLIPQ*VCPTDPARLIW
Trigger: CCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CAA 72 bp GGTACCCTCCAGATCTGGCTCTGCCAACCACCCAGCTaGGCCTGCACCTGCCCCCAACTTCCCTCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: GTLQIWLCQPPS*ACTCPQLPSKC
Trigger: GCACTTGGAGGGAAGTTGGGGGCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGATCTGGAGGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CAA 90 bp ATGTGGGCAGGGCCCTCGGACGGGACGCCGTGGAGCCTCATCTCATaGCTGTGTCCCAGCTGCACCCGTCTCAGTATGGACTGCTCCATG +
Preference number: 6 (lower is better)
Translates to: MWAGPSDGTPWSLIS*LCPSCTRLSMDCSM
Trigger: CATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCCACGGCGTCCCGTCCGAGGGCCCTGCCCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS TCA 72 bp TTCTGCTCCACTGATCCCGCAGTGGGTCTGCCCCACTaGTCCCGCCCGGCTGATCTGGACGTCAGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: FCSTDPAVGLPH*SRPADLDVSVF
Trigger: GAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS TCA 72 bp CTGTTGTGCTGTCTGGGAAGCGTCTTTCTGCTCCACTaGTCCCGCAGTGGGTCTGCCCCACTGATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: LLCCLGSVFLLH*SRSGSAPLIPP
Trigger: GGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGACAGCACAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp AAGGAGTCGGAGAGACTTGGCAGGTGTGCAGGCTTCTaGACTGTGGCCCTGAGAGGGTGGGCTAGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: KESERLGRCAGF*TVALRGWARSR
Trigger: CCTCGACCTAGCCCACCCTCTCAGGGCCACAGTGCAGAAGCCTGCACACCTGCCAAGTCTCTCCGACTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000432548.2
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
ENST00000546110.5
CDS GCA 72 bp ATCTGGCTCTGCCAACCACCCAGCTTGGCCTGCACCTaGCCCCAACTTCCCTCCAAGTGCTGGCCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: IWLCQPPSLACT*PQLPSKCWPVC
Trigger: ACAGACAGGCCAGCACTTGGAGGGAAGTTGGGGGCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp AAGCGTCTTTCTGCTCCACTGATCCCGCAGTGGGTCTaGCCCACTGATCCCGCCCGGCTGATCTGGACGTCA +
Preference number: 6 (lower is better)
Translates to: KRLSAPLIPQWV*PTDPARLIWTS
Trigger: TGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTGCGGGATCAGTGGAGCAGAAAGACGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp CCCAGCTGCACCCGTCTCAGTATGGACTGCTCCATGTaGATGTCCTGGGGCCCCCAGGGATCAACTAGGGTC +
Preference number: 6 (lower is better)
Translates to: PSCTRLSMDCSM*MSWGPQGSTRV
Trigger: GACCCTAGTTGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 72 bp GTACCCTCCAGATCTGGCTCTGCCAACCACCCAGCTTaGCCTGCACCTGCCCCCAACTTCCCTCCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: VPSRSGSANHPA*PAPAPNFPPSA
Trigger: AGCACTTGGAGGGAAGTTGGGGGCAGGTGCAGGCCAAGCTGGGTGGTTGGCAGAGCCAGATCTGGAGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp CAGTGGGTCTGCCCCACTGATCCCGCCCGGCTGATCTaGACGTCAGTGTCTTCCTCTGGGATTCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QWVCPTDPARLI*TSVSSSGIQLL
Trigger: GAGGAGCTGAATCCCAGAGGAAGACACTGACGTCCAGATCAGCCGGGCGGGATCAGTGGGGCAGACCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CAA 72 bp CTAGGGTCCCCCAAGTTGAGGAATCACCTGGTGCCATaGAAGGGAGGTGGCGTGGACCGGCGGAACCGTCCT +
Preference number: 6 (lower is better)
Translates to: LGSPKLRNHLVP*KGGGVDRRNRP
Trigger: AGGACGGTTCCGCCGGTCCACGCCACCTCCCTTCAATGGCACCAGGTGATTCCTCAACTTGGGGGACCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp AGGGATCAACTAGGGTCCCCCAAGTTGAGGAATCACCTGGTGCCATaGAAGGGAGGTGGCGTGGACCGGCGGAACCGTCCTCCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RDQLGSPKLRNHLVP*KGGGVDRRNRPPWR
Trigger: TCTCCAGGGAGGACGGTTCCGCCGGTCCACGCCACCTCCCTTCAATGGCACCAGGTGATTCCTCAACTTGGGGGACCCTAGTTGATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp GGGAGTGATGGGCTGACCAATGTCTCGAGGAAAGTGACTTCTGGATaGTGTGTCTGCGGGACGACGACCTGCGTCCTCCCCTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: GSDGLTNVSRKVTSG*CVCGTTTCVLPWLP
Trigger: GGGGAGCCAGGGGAGGACGCAGGTCGTCGTCCCGCAGACACACAATCCAGAAGTCACTTTCCTCGAGACATTGGTCAGCCCATCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp CCCCTTCCTCTTCACCATCTCCTAGGTACAGTGATAGGCTCCCCGTaGGCCCGCCAGCTCCAGTCAGGTACCCTCCAGATCTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: PLPLHHLLGTVIGSP*ARQLQSGTLQIWLC
Trigger: GCAGAGCCAGATCTGGAGGGTACCTGACTGGAGCTGGCGGGCCAACGGGGAGCCTATCACTGTACCTAGGAGATGGTGAAGAGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp TTGCTGTGTCCCAGCTGCACCCGTCTCAGTATGGACTaGTCCATGTGGATGTCCTGGGGCCCCCAGGGATCA +
Preference number: 6 (lower is better)
Translates to: LLCPSCTRLSMD*SMWMSWGPQGS
Trigger: TGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 72 bp CTCCCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTGCTGGGGCCTCTCGGC +
Preference number: 6 (lower is better)
Translates to: LPLLAELRARGL*NCSCMLLGPLG
Trigger: GCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS CCA 72 bp CAAGTTGAGGAATCACCTGGTGCCATTGAAGGGAGGTaGCGTGGACCGGCGGAACCGTCCTCCCTGGAGACT +
Preference number: 6 (lower is better)
Translates to: QVEESPGAIEGR*RGPAEPSSLET
Trigger: AGTCTCCAGGGAGGACGGTTCCGCCGGTCCACGCCACCTCCCTTCAATGGCACCAGGTGATTCCTCAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 72 bp CACTTCCTAGGGAAAGCCTGTCTCTGTGTCCCAGAGTaGCTGGGACGCTGCTTGTGTGTGGGTCCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: HFLGKACLCVPE*LGRCLCVGPLQ
Trigger: CTGCAGGGGACCCACACACAAGCAGCGTCCCAGCCACTCTGGGACACAGAGACAGGCTTTCCCTAGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp GTTAGTGTTCTGCAGAGTACCTCCTGTGTGCAGGGCTaGGCTGAGCCTGACGCAGGGCCTCCTCTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: VSVLQSTSCVQG*AEPDAGPPLSN
Trigger: GTTGCTGAGAGGAGGCCCTGCGTCAGGCTCAGCCCAGCCCTGCACACAGGAGGTACTCTGCAGAACACTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CAA 90 bp TCTGGGCGGCTTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTaGCTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGGCAGAGACTG +
Preference number: 6 (lower is better)
Translates to: SGRLPPQGEFLDWEF*LQTKLLGRQQWQRL
Trigger: CAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371173.8
ENST00000395822.7
CDS CAA 90 bp TCTGGGCGGCTTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTaGCTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGGCAGAGACTC +
Preference number: 6 (lower is better)
Translates to: SGRLPPQGEFLDWEF*LQTKLLGRQQWQRL
Trigger: GAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS TCA 72 bp TGCCAGGAGCACCCTTCCCTCACGCCCCAACCTGTATaGTGTCTACTCAACCTCCAGGCCTCCTCAGATGCC +
Preference number: 6 (lower is better)
Translates to: CQEHPSLTPQPV*CLLNLQASSDA
Trigger: GGCATCTGAGGAGGCCTGGAGGTTGAGTAGACATCATACAGGTTGGGGCGTGAGGGAAGGGTGCTCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp AATGTCTCGAGGAAAGTGACTTCTGGATTGTGTGTCTaGGGGACGACGACCTGCGTCCTCCCCTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: NVSRKVTSGLCV*GTTTCVLPWLP
Trigger: GGGGAGCCAGGGGAGGACGCAGGTCGTCGTCCCGCAGACACACAATCCAGAAGTCACTTTCCTCGAGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 72 bp GCAAGTTTCACCGGGGAGCCAGCCTCTGTCAGCACCTaGAGGATTCTTTGTTCAAGGTGGCCCCGGGAGCTA +
Preference number: 6 (lower is better)
Translates to: ASFTGEPASVST*RILCSRWPREL
Trigger: TAGCTCCCGGGGCCACCTTGAACAAAGAATCCTGCAGGTGCTGACAGAGGCTGGCTCCCCGGTGAAACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538947.5
CDS CCA 72 bp ACCCGTCTCAGTATGGACTGCTCCATGTGGATGTCCTaGGGCCCCCAGGGATCAACTAGGGTCCCCCAAGTT +
Preference number: 6 (lower is better)
Translates to: TRLSMDCSMWMS*GPQGSTRVPQV
Trigger: AACTTGGGGGACCCTAGTTGATCCCTGGGGGCCCCAGGACATCCACATGGAGCAGTCCATACTGAGACGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 72 bp ATCCCGTTGTTGGCTGAACTGAGGGCCAGGGGTCTCTaGAATTGTAGCTGCATGTTGCTGGGGCCTCTCGGC +
Preference number: 6 (lower is better)
Translates to: IPLLAELRARGL*NCSCMLLGPLG
Trigger: GCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432548.2
ENST00000546110.5
CDS CCA 72 bp CAGTGGCAGAGACTCCGCTCGTGCTGTTGTGCTGTCTaGGAAGCGTCTTTCTGCTCCACTGATCCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: QWQRLRSCCCAV*EASFCSTDPAV
Trigger: CACTGCGGGATCAGTGGAGCAGAAAGACGCTTCCCAGACAGCACAACAGCACGAGCGGAGTCTCTGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CAA 72 bp CCTCCTGGGCCAGCCACCCCTGGGCTGATAGACATTTaGTTGCTGTTGCCGATGGTGGCGTCCTCGAGAAAG +
Preference number: 6 (lower is better)
Translates to: PPGPATPGLIDI*LLLPMVASSRK
Trigger: CTTTCTCGAGGACGCCACCATCGGCAACAGCAACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000453793.1
ENST00000461547.5
CDS CAA 72 bp GGGCTGACCAATGTCTCGAGGAAAGTGACTTCTGGATaGTGTGTCTGCGGGACGACGACCTGCGTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GLTNVSRKVTSG*CVCGTTTCVLP
Trigger: GGGGAGGACGCAGGTCGTCGTCCCGCAGACACACAATCCAGAAGTCACTTTCCTCGAGACATTGGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp CCTGCGACTCCTCCTGGGCCAGCCACCCCTGGGCTGATAGACATTTaGTTGCTGTTGCCGATGGTGGCGTCCTCGAGAAAGCACGATTTC +
Preference number: 6 (lower is better)
Translates to: PATPPGPATPGLIDI*LLLPMVASSRKHDF
Trigger: GAAATCGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCAACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCAGGAGGAGTCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp CCCATGTGGCAGAGTTCAGATTCGAACCCAGGCTCAAATCTGTGCTaGTCCATTGCCAGGATGCTCCCTGCAGGGTCAGACCCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: PMWQSSDSNPGSNLC*SIARMLPAGSDPPP
Trigger: GGGAGGCGGGTCTGACCCTGCAGGGAGCATCCTGGCAATGGACAAGCACAGATTTGAGCCTGGGTTCGAATCTGAACTCTGCCACATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CAA 90 bp GCGACTCCTCCTGGGCCAGCCACCCCTGGGCTGATAGACATTTTGTaGCTGTTGCCGATGGTGGCGTCCTCGAGAAAGCACGATTTCATG +
Preference number: 6 (lower is better)
Translates to: ATPPGPATPGLIDIL*LLPMVASSRKHDFM
Trigger: CATGAAATCGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCAACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCAGGAGGAGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 90 bp TTGGCTGAACTGAGGGCCAGGGGTCTCTGGAATTGTAGCTGCATGTaGCTGGGGCCTCTCGGCTGCAGAAAGAAAGATGGGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: LAELRARGLWNCSCM*LGPLGCRKKDGSEG
Trigger: CCCCTCTGACCCATCTTTCTTTCTGCAGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 72 bp GCAAGTTTCACCGGGGAGCCAGCCTCTGTCAGCACCTaGAGGATTCTTTGTTCAAGGTGGCCTTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ASFTGEPASVST*RILCSRWPSLP
Trigger: GGGCAGAGAAGGCCACCTTGAACAAAGAATCCTGCAGGTGCTGACAGAGGCTGGCTCCCCGGTGAAACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000480037.1
ENST00000541799.1
CDS GCA 72 bp ACGCCGTGGAGCCTCATCTCATTGCTGTGTCCCAGCTaGACCCGTCTCAGTATGGACTGCTCCATGTGGATG +
Preference number: 6 (lower is better)
Translates to: TPWSLISLLCPS*TRLSMDCSMWM
Trigger: CATCCACATGGAGCAGTCCATACTGAGACGGGTGCAGCTGGGACACAGCAATGAGATGAGGCTCCACGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 72 bp TTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTTaGTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: FPLRVSSWTGNS*FKRSFWAGSSG
Trigger: GCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 72 bp TGGGCAGGTGTCAGCTGCTTACAGCCCGGAAATAGATaGCTAGCCAGGCCGGCCAGATTCGGTTTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: WAGVSCLQPGNR*LARPARFGFRR
Trigger: TCTCCTGAAACCGAATCTGGCCGGCCTGGCTAGGCATCTATTTCCGGGCTGTAAGCAGCTGACACCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395822.7
CDS GCA 72 bp GACCGACCAGACATCAGAAACAGACCTTTCCCCCAGTaGCCAGTCGTGGAGCCCTGGAAATGCCATTCCTGG +
Preference number: 6 (lower is better)
Translates to: DRPDIRNRPFPQ*PVVEPWKCHSW
Trigger: CCAGGAATGGCATTTCCAGGGCTCCACGACTGGGCACTGGGGGAAAGGTCTGTTTCTGATGTCTGGTCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp AGATTCGAACCCAGGCTCAAATCTGTGCTTGTCCATTaGCAGGATGCTCCCTGCAGGGTCAGACCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RFEPRLKSVLVH*QDAPCRVRPAS
Trigger: GGAGGCGGGTCTGACCCTGCAGGGAGCATCCTGGCAATGGACAAGCACAGATTTGAGCCTGGGTTCGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CCA 72 bp GGGCCAGGGGTCTCTGGAATTGTAGCTGCATGTTGCTaGGGCCTCTCGGCTGCAGAAAGAAAGATGGGTCAG +
Preference number: 6 (lower is better)
Translates to: GPGVSGIVAACC*GLSAAERKMGQ
Trigger: CTGACCCATCTTTCTTTCTGCAGCCGAGAGGCCCCAGCAACATGCAGCTACAATTCCAGAGACCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CCA 72 bp TCCTGGACTGGGAATTCTTGCTTCAAACGAAGCTTCTaGGCCGGCAGCAGTGGCAGAGACTCCGCTCGTGCT +
Preference number: 6 (lower is better)
Translates to: SWTGNSCFKRSF*AGSSGRDSARA
Trigger: AGCACGAGCGGAGTCTCTGCCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp TTGTTCAAGGTGGCCCCGGGAGCTACCGCTGGTCCTTaGAAGGAAGAAGTACTGTACCTTCTCTGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: LFKVAPGATAGP*KEEVLYLLCPG
Trigger: ACCCGGGCAGAGAAGGTACAGTACTTCTTCCTTCCAAGGACCAGCGGTAGCTCCCGGGGCCACCTTGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538947.5
CDS CAA 72 bp CTTCCCCCTCAGGGTGAGTTCCTGGACTGGGAATTCTaGCTTCAAACGAAGCTTCTGGGCCGGCAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LPPQGEFLDWEF*LQTKLLGRQQW
Trigger: CCACTGCTGCCGGCCCAGAAGCTTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CAA 72 bp CAGATTCGAACCCAGGCTCAAATCTGTGCTTGTCCATaGCCAGGATGCTCCCTGCAGGGTCAGACCCGCCTC +
Preference number: 6 (lower is better)
Translates to: QIRTQAQICACP*PGCSLQGQTRL
Trigger: GAGGCGGGTCTGACCCTGCAGGGAGCATCCTGGCAATGGACAAGCACAGATTTGAGCCTGGGTTCGAATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CAA 90 bp GGCAATGCCGGTAGTTGCAAACTCAGACTCCAGAGTTCAACACACTaGACTTCAAATCCTGCCTGCGCCCTGGCAGCTGCGGCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GNAGSCKLRLQSSTH*TSNPACALAAAASC
Trigger: GCAGGAAGCCGCAGCTGCCAGGGCGCAGGCAGGATTTGAAGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAACTACCGGCATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CAA 72 bp TCGGTAGAGGACTTGGTTGAGCTCCCTCTTGGGTGCTaGGCATTCCTTCACCAGCTGGGCAAGTTTCACCGG +
Preference number: 6 (lower is better)
Translates to: SVEDLVELPLGC*AFLHQLGKFHR
Trigger: CCGGTGAAACTTGCCCAGCTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS CAA 90 bp CTTTTTCATTCGGTAGAGGACTTGGTTGAGCTCCCTCTTGGGTGCTaGGCATTCCTTCACCAGCTGGGCAAGTTTCACCGGGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LFHSVEDLVELPLGC*AFLHQLGKFHRGAS
Trigger: GCTGGCTCCCCGGTGAAACTTGCCCAGCTGGTGAAGGAATGCCAAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACCGAATGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS CAA 90 bp CCTCCTGGGCCAGCCACCCCTGGGCTGATAGACATTTTGTTGCTGTaGCCGATGGTGGCGTCCTCGAGAAAGCACGATTTCATGTGGATT +
Preference number: 6 (lower is better)
Translates to: PPGPATPGLIDILLL*PMVASSRKHDFMWI
Trigger: AATCCACATGAAATCGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCAACAAAATGTCTATCAGCCCAGGGGTGGCTGGCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS TCA 72 bp CAAGGCCTGGTTTCCTCATCCCGTTGTTGGCTGAACTaGGGGCCAGGGGTCTCTGGAATTGTAGCTGCATGT +
Preference number: 6 (lower is better)
Translates to: QGLVSSSRCWLN*GPGVSGIVAAC
Trigger: ACATGCAGCTACAATTCCAGAGACCCCTGGCCCTCAGTTCAGCCAACAACGGGATGAGGAAACCAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432548.2
ENST00000546110.5
CDS CAA 72 bp CCAGCCACCCCTGGGCTGATAGACATTTTGTTGCTGTaGCCGATGGTGGCGTCCTCGAGAAAGCACGATTTC +
Preference number: 6 (lower is better)
Translates to: PATPGLIDILLL*PMVASSRKHDF
Trigger: GAAATCGTGCTTTCTCGAGGACGCCACCATCGGCAACAGCAACAAAATGTCTATCAGCCCAGGGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS TCA 72 bp CCTCCTCTCAGCAACCCCTACCAAGCAGCCCTGCTGTaGGCTCCATCAACCAGAAAAAGAAACCAAGGCACA +
Preference number: 6 (lower is better)
Translates to: PPLSNPYQAALL*APSTRKRNQGT
Trigger: TGTGCCTTGGTTTCTTTTTCTGGTTGATGGAGCTCACAGCAGGGCTGCTTGGTAGGGGTTGCTGAGAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS TCA 72 bp GTAGTTGCAAACTCAGACTCCAGAGTTCAACACACTTaGCTTCAAATCCTGCCTGCGCCCTGGCAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: VVANSDSRVQHT*LQILPAPWQLR
Trigger: CCGCAGCTGCCAGGGCGCAGGCAGGATTTGAAGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 72 bp AGCTCCCCTCGTGTGAGGCTTCATCCACATAGTGGCTaGCTTCTGCAGCTTTGTGACTCCTGTTTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: SSPRVRLHPHSG*LLQLCDSCFQE
Trigger: CTCTTGGAAACAGGAGTCACAAAGCTGCAGAAGGCAGCCACTATGTGGATGAAGCCTCACACGAGGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS CCA 72 bp GCAGAACTTCCCCTAGTGTCCCCTGCTGTGCTTGCATaGCTCACTGTTGTACCTTCAGCATCTAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: AELPLVSPAVLA*LTVVPSASSTV
Trigger: CACTGTGCTAGATGCTGAAGGTACAACAGTGAGCCATGCAAGCACAGCAGGGGACACTAGGGGAAGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp ACATCAGAAACAGACCTTTCCCCCAGTGCCCAGTCGTaGAGCCCTGGAAATGCCATTCCTGGATTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: TSETDLSPSAQS*SPGNAIPGFSG
Trigger: TCCAGAGAATCCAGGAATGGCATTTCCAGGGCTCCACGACTGGGCACTGGGGGAAAGGTCTGTTTCTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS CCA 72 bp GGATTCTTTGTTCAAGGTGGCCCCGGGAGCTACCGCTaGTCCTTGGAAGGAAGAAGTACTGTACCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: GFFVQGGPGSYR*SLEGRSTVPSL
Trigger: CAGAGAAGGTACAGTACTTCTTCCTTCCAAGGACCAGCGGTAGCTCCCGGGGCCACCTTGAACAAAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538947.5
CDS CAA 72 bp CAGAGTTCAGATTCGAACCCAGGCTCAAATCTGTGCTaGTCCATTGCCAGGATGCTCCCTGCAGGGTCAGAC +
Preference number: 6 (lower is better)
Translates to: QSSDSNPGSNLC*SIARMLPAGSD
Trigger: GTCTGACCCTGCAGGGAGCATCCTGGCAATGGACAAGCACAGATTTGAGCCTGGGTTCGAATCTGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS CAA 72 bp GGTAGTTGCAAACTCAGACTCCAGAGTTCAACACACTaGACTTCAAATCCTGCCTGCGCCCTGGCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: GSCKLRLQSSTH*TSNPACALAAA
Trigger: CGCAGCTGCCAGGGCGCAGGCAGGATTTGAAGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS TCA 72 bp TTCATGTGGATTCTCTGGGCGGCTTCCCCCTCAGGGTaGGTTCCTGGACTGGGAATTCTTGCTTCAAACGAA +
Preference number: 6 (lower is better)
Translates to: FMWILWAASPSG*VPGLGILASNE
Trigger: TTCGTTTGAAGCAAGAATTCCCAGTCCAGGAACTCACCCTGAGGGGGAAGCCGCCCAGAGAATCCACATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
CDS GCA 72 bp TGTATGATGTCTACTCAACCTCCAGGCCTCCTCAGATaGCACTTCCTAGGGAAAGCCTGTCTCTGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: CMMSTQPPGLLR*HFLGKACLCVP
Trigger: TGGGACACAGAGACAGGCTTTCCCTAGGAAGTGGCATCTGAGGAGGCCTGGAGGTTGAGTAGACATCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461547.5
CDS GCA 72 bp GGCAGCTCCCTAGGGGTAAGTGGCAATGCCGGTAGTTaGAAACTCAGACTCCAGAGTTCAACACACTTGACT +
Preference number: 6 (lower is better)
Translates to: GSSLGVSGNAGS*KLRLQSSTHLT
Trigger: AGTCAAGTGTGTTGAACTCTGGAGTCTGAGTTTGCAACTACCGGCATTGCCACTTACCCCTAGGGAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461547.5
ENST00000480037.1
CDS GCA 72 bp GTCCATGCTTTGGACTGCTCATCCATGTCCAGAAGGTaGCTGCTCTTCATCCTGTACAAGTCTCGGTTCACA +
Preference number: 6 (lower is better)
Translates to: VHALDCSSMSRR*LLFILYKSRFT
Trigger: TGTGAACCGAGACTTGTACAGGATGAAGAGCAGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS GCA 72 bp GATGTTCCCGTGTCCAATCTGGATGGCTTCGGAGTTTaGAATGGAAATCCAGCTGTTGGGTCCATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: DVPVSNLDGFGV*NGNPAVGSILA
Trigger: TGCCAGAATGGACCCAACAGCTGGATTTCCATTGCAAACTCCGAAGCCATCCAGATTGGACACGGGAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS CCA 72 bp TTCCAGAATCTTCTGGGCGGTAAATCGTCCATGCTTTaGACTGCTCATCCATGTCCAGAAGGTGCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: FQNLLGGKSSML*TAHPCPEGACS
Trigger: AGAGCAGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCATGGACGATTTACCGCCCAGAAGATTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS GCA 72 bp TCTTCTTCCAGAATCTTCTGGGCGGTAAATCGTCCATaGTTTGGACTGCTCATCCATGTCCAGAAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SSSRIFWAVNRP*FGLLIHVQKVP
Trigger: AGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCATGGACGATTTACCGCCCAGAAGATTCTGGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
CDS GCA 72 bp ATGCTTTGGACTGCTCATCCATGTCCAGAAGGTGCCTaGTCTTCATCCTGTACAAGTCTCGGTTCACATCTT +
Preference number: 6 (lower is better)
Translates to: MLWTAHPCPEGA*SSSCTSLGSHL
Trigger: AAGATGTGAACCGAGACTTGTACAGGATGAAGAGCAGGCACCTTCTGGACATGGATGAGCAGTCCAAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000395822.7
ENST00000461547.5
ENST00000480037.1
ENST00000541799.1
ENST00000546110.5
CDS CAA 72 bp GGAGACTTTCAACTCCTTTTTCATTCGGTAGAGGACTaGGTTGAGCTCCCTCTTGGGTGCTTGGCATTCCTT +
Preference number: 6 (lower is better)
Translates to: GDFQLLFHSVED*VELPLGCLAFL
Trigger: AAGGAATGCCAAGCACCCAAGAGGGAGCTCAACCAAGTCCTCTACCGAATGAAAAAGGAGTTGAAAGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371173.8
ENST00000432548.2
ENST00000461547.5
ENST00000480037.1
ENST00000538947.5
ENST00000541799.1
CDS CCA 72 bp ACCAATCTACATGCCGTTAAGAACATTTGTGATTCATaGGAGGAGGTCAAACTATCAACATTCACAGGAGTC +
Preference number: 6 (lower is better)
Translates to: TNLHAVKNICDS*EEVKLSTFTGV
Trigger: GACTCCTGTGAATGTTGATAGTTTGACCTCCTCCCATGAATCACAAATGTTCTTAACGGCATGTAGATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453793.1
CDS TCA 72 bp AGAGTGATTCCTCAGATGGATCTGGGCAAAGTAAGTTaGAAATCTTCTGGAAAAGATCACCAATCTACATGC +
Preference number: 6 (lower is better)
Translates to: RVIPQMDLGKVS*KSSGKDHQSTC
Trigger: GCATGTAGATTGGTGATCTTTTCCAGAAGATTTTCAACTTACTTTGCCCAGATCCATCTGAGGAATCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453793.1
CDS CCA 72 bp TCAGATGGATCTGGGCAAAGTAAGTTGAAAATCTTCTaGAAAAGATCACCAATCTACATGCCGTTAAGAACA +
Preference number: 6 (lower is better)
Translates to: SDGSGQSKLKIF*KRSPIYMPLRT
Trigger: TGTTCTTAACGGCATGTAGATTGGTGATCTTTTCCAGAAGATTTTCAACTTACTTTGCCCAGATCCATCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453793.1