Pregenerated sensors for ZBED8 (Homo sapiens)
Ensembl gene IDs: ENSG00000221886Ensembl transcript IDs: ENST00000408953.4, ENST00000523213.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATATCAATTCCTAGCCTATaGCACCATTTAGCTGGATAT | + |
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Preference number: 3 (lower is better) Translates to: HSTGARGMDIVRLTPKSISIPSL*HHLAGY Trigger: ATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGA...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACGCCCGTCTCCAAGCCTaGGGCGCAGGCCTATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDARLQA*GAGLWD Trigger: ATCCCATAGGCCTGCGCCTCAGGCTTGGAGACGGGC...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAGGCAGGAATCTGCGGTaGGCCTGGAGAGAGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSIGRNLR*AWREKH Trigger: ATGCTTCTCTCTCCAGGCGCACCGCAGATTCCTGCC...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACCTAGGGCCCAGCCTCTaGCCGTCGGAACCAGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDLGPSL*PSEPVE Trigger: CTCTACTGGTTCCGACGGCCAGAGGCTGGGCCCTAG...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAAATCTGCGGTGCGCCTaGAGAGAGAAGCATCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSINLRCA*REKHPQ Trigger: TTGCGGATGCTTCTCTCTCCAGGCGCACCGCAGATT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTTACAGCCTCCCGGGTaGGATAAGAACGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDLQPPG*DKNASC Trigger: GCAGCTGGCGTTCTTATCTCACCCGGGAGGCTGTAA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTACTCTGATCAGATGGTaGTGGCATATGCTTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSATLIRW*WHMLQA Trigger: AGCCTGAAGCATATGCCAGCACCATCTGATCAGAGT...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATATGCCAGGTTTGGAAATaGTGTGAATTGGGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSICQVWK*CELGTP Trigger: TGGTGTGCCCAATTCACAGCATTTCCAAACCTGGCA...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTACACAACACACACTGTaGACGCTGAGTTCCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSTQHTL*TLSSIY Trigger: GTAGATGGAACTCAGCGTCCACAGTGTGTGTTGTGT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAACAAATGCCATTAGCTaGCTGCAGTCATCCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSITNAIS*LQSSMS Trigger: TGACATGGATGACTGCAGTCAGCTAATGGCATTTGT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTTTCATCCCAGTCCTCTaGATAGATGCACTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSAFIPVL*IDALSS Trigger: TGAACTCAGTGCATCTATGCAGAGGACTGGGATGAA...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATATGTCTTTGCCAGGTTTaGAAATGCTGTGAATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSICLCQV*KCCELG Trigger: GCCCAATTCACAGCATTTCCAAACCTGGCAAAGACA...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTCCTTTCATGGATAGCTaGAATGGTTCACAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSPFMDS*NGSQKR Trigger: TCTCTTCTGTGAACCATTGCAGCTATCCATGAAAGG...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTGCTTACAGTGACTTCTaGTGTAGCTGTAGCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSAAYSDF*CSCSFC Trigger: ACAAAAGCTACAGCTACAGCAGAAGTCACTGTAAGC...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACGGTTTGGAAATGCTGTaGATTGGGCACACCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDGLEML*IGHTRN Trigger: ATTTCTGGTGTGCCCAATTCACAGCATTTCCAAACC...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTTCCCAAAACTATTTGTaGTATTTCCAGTGCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSSQNYL*YFQCTR Trigger: CCTTGTGCACTGGAAATAGCACAAATAGTTTTGGGA...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTCTCAATTGTTGCAGATaGAGTGTTATTTCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSALNCCR*SVISAA Trigger: TGCAGCTGAAATAACACTGCATCTGCAACAATTGAG...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACGGAAATGCTGTGAATTaGGCACACCAGAAATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDGNAVN*AHQKSS Trigger: TGAGGATTTCTGGTGTGCCCAATTCACAGCATTTCC...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAACAGTTTTGATGGTCTaGGGTCAGCATTTGAAAATA | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSITVLMV*GQHLKI Trigger: TATTTTCAAATGCTGACCTCAGACCATCAAAACTGT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTAATAAAGTATCCTCATaGGATGCAACTCCAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSNKVSS*DATPNA Trigger: AGCATTTGGAGTTGCATCTCATGAGGATACTTTATT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAGTAGTATTCCAGAGATaGCACAGAATTTTGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSIVVFQR*HRILLT Trigger: TGTAAGCAAAATTCTGTGGCATCTCTGGAATACTAC...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAATATCTTCTAGAACTTaGTGTAAGATATCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: HSTGARGMDIVRLTPKSIISSRT*CKISWL Trigger: GAGCCAGGATATCTTACAGCAAGTTCTAGAAGATAT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTCATCAACTAAATTACTaGTCTTGTGGTGAAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSAHQLNY*SCGEET Trigger: AGTTTCTTCACCACAAGAGCAGTAATTTAGTTGATG...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTAAGTTGCTCAATTGTTaGAGATGCAGTGTTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSKLLNC*RCSVIS Trigger: TGAAATAACACTGCATCTGCAACAATTGAGCAACTT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTACAAAGGTATGTAGTTaGAAATGGCATAAGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: IHSTGARGMDIVRLTPKSTKVCS*KWHKDF Trigger: GAAATCCTTATGCCATTTGCAACTACATACCTTTGT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTTGCTGTAAGATATCCTaGCTCATTTCATCAATTCTA | + |
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Preference number: 4 (lower is better) Translates to: SPGSIPSLLHHLAGYSSACCKIS*LISSIL Trigger: TAGAATTGATGAAATGAGCCAGGATATCTTACAGCA...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR TCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTACATTTCAAAAATGTaGGTAAGTATTTGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDYISKM*VSIWPR Trigger: CCGAGGCCAAATACTTACTCACATTTTTGAAATGTA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR GCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTCAAGTGCTATCTTATaGTTCAGAAAGAAGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDSSAIL*FRKKSL Trigger: CAGAGACTTCTTTCTGAAGCATAAGATAGCACTTGA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTGCTGTCTGTTAAAATaGTCTGACAGTTTTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDCCLLK*SDSFDG Trigger: ACCATCAAAACTGTCAGACCATTTTAACAGACAGCA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACGAGGATTCTTCTCCTTaGCACATAAATACGCAAATT | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDEDSSP*HINTQI Trigger: AATTTGCGTATTTATGTGCCAAGGAGAAGAATCCTC...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACCACCTCATTTCAGTATaGAAAAGGAGGACACTATAT | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDHLISV*KRRTLY Trigger: ATATAGTGTCCTCCTTTTCCATACTGAAATGAGGTG...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CCA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTGCCTTTTTGACTTCTaGGATATCTTCTCTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NLSITKTGELNLSFCLFDCLFDF*DIFSFL Trigger: GAGAAAAGAGAAGATATCCCAGAAGTCAAAAAGGCA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS CCA 90 bp | GCGGTTCCTCGGGTCCAACCCCCGGGCAGGAATCTGCGGTGCGCCTaGAGAGAGAAGCATCCGCAACAACCTCCGCCTCAGCCAGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: AVPRVQPPGRNLRCA*REKHPQQPPPQPGP Trigger: CGGGCCTGGCTGAGGCGGAGGTTGTTGCGGATGCTTCTCTCTCCAGGCGCACCGCAGATTCCTGCCCGGGGGTTGGACCCGAGGAACCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 90 bp | GAGACGGCGGTTCCTCGGGTCCAACCCCCGGGCAGGAATCTGCGGTaGGCCTGGAGAGAGAAGCATCCGCAACAACCTCCGCCTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ETAVPRVQPPGRNLR*AWREKHPQQPPPQP Trigger: TGGCTGAGGCGGAGGTTGTTGCGGATGCTTCTCTCTCCAGGCGCACCGCAGATTCCTGCCCGGGGGTTGGACCCGAGGAACCGCCGTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTAATGTGAGTAAGTATTaGGCCTCGGGAAAGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SPGSIPSLLHHLAGYSSANVSKY*ASGKPP Trigger: AGGTGGCTTTCCCGAGGCCAAATACTTACTCACATT...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTTGGAAATGCTGTGAATaGGGCACACCAGAAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: IHSTGARGMDIVRLTPKSWKCCE*GTPEIL Trigger: GAGGATTTCTGGTGTGCCCAATTCACAGCATTTCCA...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATATGCTTCAGGCTATaGAGATCATGCCCAGCTACA | + |
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Preference number: 5 (lower is better) Translates to: IHSTGARGMDIVRLTPKSICFRL*RSCPAT Trigger: TGTAGCTGGGCATGATCTCAATAGCCTGAAGCATAT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTAGTCATCCATGTCAGTaGTCTCAGCAAGCTGAATAC | + |
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Preference number: 5 (lower is better) Translates to: IHSTGARGMDIVRLTPKSSHPCQ*SQQAEY Trigger: GTATTCAGCTTGCTGAGACAACTGACATGGATGACT...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATATTTCTAGAGCTGTCTTaGCCAGGTTTGGAAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: HSTGARGMDIVRLTPKSIFLELS*PGLEML Trigger: CAGCATTTCCAAACCTGGCAAAGACAGCTCTAGAAA...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTAGATGCCACAGAATTTaGCTTACAGGGTTGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SPGSIPSLLHHLAGYSSARCHRI*LTGLLG Trigger: TCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCT...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTTGGTCCCAAAACTATTaGTGCTATTTCCAGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: IHSTGARGMDIVRLTPKSWSQNY*CYFQCT Trigger: TGTGCACTGGAAATAGCACAAATAGTTTTGGGACCA...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTTATCCATGGAAGAAGTaGCTCAATTGTTGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: SPGSIPSLLHHLAGYSSAYPWKK*LNCCRC Trigger: GCATCTGCAACAATTGAGCAACTTCTTCCATGGATA...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS GCA 90 bp | CATAGAGGAGGCACCATCAGTACAAACAGAGCCACATACATCAAGTaGTATCTTATGCTTCAGAAAGAAGTCTCTGAAGAGATTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: HRGGTISTNRATYIK*YLMLQKEVSEEIEH Trigger: GTGTTCAATCTCTTCAGAGACTTCTTTCTGAAGCATAAGATAGCACTTGATGTATGTGGCTCTGTTTGTACTGATGGTGCCTCCTCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGCTCAATTCCTAGCCTATTGCACCATTTAGCTGGATATTCTAGTGCTTTAAGAGGACTGGCTTaGATATCTTCTAGAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: SPGSIPSLLHHLAGYSSALRGLA*ISSRTC Trigger: GCAAGTTCTAGAAGATATCAAAGCCAGTCCTCTTAA...AGCACTAGAATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGAGCCAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | ATTCATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTTTTGGAGCTCTCCCTTaGATGAAATTTATTACCCTC | + |
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Preference number: 5 (lower is better) Translates to: IHSTGARGMDIVRLTPKSFGALP*MKFITL Trigger: GAGGGTAATAAATTTCATCAAAGGGAGAGCTCCAAA...ACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAGAAGAAGTTGCTCAATaGTTGCAGATGCAGTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: HSTGARGMDIVRLTPKSIEEVAQ*LQMQCY Trigger: ATAACACTGCATCTGCAACAATTGAGCAACTTCTTC...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAAAGTCTCTGAAGAGATaGAACACATCTATTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: HSTGARGMDIVRLTPKSIKSLKR*NTSIPF Trigger: GAAAGGAATAGATGTGTTCAATCTCTTCAGAGACTT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS-3UTR CAA 90 bp | CATAGCACAGGAGCTAGGGGAATGGACATTGTGAGACTAACTCCAAAGAGTATAAATCCTCAAGCTTCATaGTCTCAAATTCCATTAGGA | + |
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Preference number: 5 (lower is better) Translates to: HSTGARGMDIVRLTPKSINPQAS*SQIPLG Trigger: TCCTAATGGAATTTGAGACAATGAAGCTTGAGGATT...TATACTCTTTGGAGTTAGTCTCACAATGTCCATTCCCCTAGCTCCTGTGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS GCA 90 bp | GCAGATAACTTCTCTCTAGCTGATACTGTGTTCATCCCAGTCCTCTaGATAGATGCACTGAGTTCATTTAAGTGTTTGAATAAATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ADNFSLADTVFIPVL*IDALSSFKCLNKSA Trigger: TGCAGATTTATTCAAACACTTAAATGAACTCAGTGCATCTATGCAGAGGACTGGGATGAACACAGTATCAGCTAGAGAGAAGTTATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS-3UTR CAA 90 bp | AACCTCTCCATAACAAAGACGGGCGAACTCAATCTTTCATTTTGCCTTTTTGACTCAATTCCTAGCCTATaGCACCATTTAGCTGGATAT | + |
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Preference number: 5 (lower is better) Translates to: NLSITKTGELNLSFCLFDSIPSL*HHLAGY Trigger: ATATCCAGCTAAATGGTGCAATAGGCTAGGAATTGA...GTCAAAAAGGCAAAATGAAAGATTGAGTTCGCCCGTCTTTGTTATGGAGAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS GCA 90 bp | AAAGCCACCTCATTTCAGTATGGAAAAGGAGGACACTATATTCTATaGCAATTTCTTCAAAGAAAGCCTGAAATAGGCGATGATTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: KATSFQYGKGGHYIL*QFLQRKPEIGDDLE Trigger: CTCCAAATCATCGCCTATTTCAGGCTTTCTTTGAAGAAATTGGCATAGAATATAGTGTCCTCCTTTTCCATACTGAAATGAGGTGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 90 bp | AGATCTCCAATGGAAAAATATCCATGGAAGAAGTTGCTCAATTGTTaGAGATGCAGTGTTATTTCAGCTGCAATGAATATGCCTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: RSPMEKYPWKKLLNC*RCSVISAAMNMPSL Trigger: TAATGAAGGCATATTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGAGATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 90 bp | ATCCATTTACTTGCCTCATTAAGATCTCCAATGGAAAAATATCCATaGAAGAAGTTGCTCAATTGTTGCAGATGCAGTGTTATTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IHLLASLRSPMEKYP*KKLLNCCRCSVISA Trigger: AGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGAGATCTTAATGAGGCAAGTAAATGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS TCA 72 bp | GACTCAGCGCGGTCTCCGCCCGCCCGTCTCCAAGCCTaGGGCGCAGGCCTATGGGATGCACGGGCTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DSARSPPARLQA*GAGLWDARASF Trigger: AAAAGAAGCCCGTGCATCCCATAGGCCTGCGCCTCAGGCTTGGAGACGGGCGGGCGGAGACCGCGCTGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | CGGGTCCAACCCCCGGGCAGGAATCTGCGGTGCGCCTaGAGAGAGAAGCATCCGCAACAACCTCCGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVQPPGRNLRCA*REKHPQQPPPQ Trigger: CTGAGGCGGAGGTTGTTGCGGATGCTTCTCTCTCCAGGCGCACCGCAGATTCCTGCCCGGGGGTTGGACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | GTTCCTCGGGTCCAACCCCCGGGCAGGAATCTGCGGTaGGCCTGGAGAGAGAAGCATCCGCAACAACCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VPRVQPPGRNLR*AWREKHPQQPP Trigger: CGGAGGTTGTTGCGGATGCTTCTCTCTCCAGGCGCACCGCAGATTCCTGCCCGGGGGTTGGACCCGAGGAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | GATGGTGCTGGCATATGCTTCAGGCTATTGAGATCATaGCCAGCTACACCACCATGCTGTCTGTTAAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: DGAGICFRLLRS*PATPPCCLLKW Trigger: CCATTTTAACAGACAGCATGGTGGTGTAGCTGGGCATGATCTCAATAGCCTGAAGCATATGCCAGCACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS TCA 72 bp | GAAAATACTGAGTTACACAACACACACTGTGGACGCTaGGTTCCATCTACTTCCGTTGTACAGGTGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ENTELHNTHCGR*VPSTSVVQVNQ Trigger: CTGGTTCACCTGTACAACGGAAGTAGATGGAACTCAGCGTCCACAGTGTGTGTTGTGTAACTCAGTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | TCCAAATGCTTTCAAGGTTTCACTCTGATCAGATGGTaGTGGCATATGCTTCAGGCTATTGAGATCATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SKCFQGFTLIRW*WHMLQAIEIMP Trigger: GGGCATGATCTCAATAGCCTGAAGCATATGCCAGCACCATCTGATCAGAGTGAAACCTTGAAAGCATTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | TCATGCCCAGCTACACCACCATGCTGTCTGTTAAAATaGTCTGACAGTTTTGATGGTCTGAGGTCAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SCPATPPCCLLK*SDSFDGLRSAF Trigger: AAATGCTGACCTCAGACCATCAAAACTGTCAGACCATTTTAACAGACAGCATGGTGGTGTAGCTGGGCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | AAATGCTTTCAAGGTTTCACTCTGATCAGATGGTGCTaGCATATGCTTCAGGCTATTGAGATCATGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KCFQGFTLIRWC*HMLQAIEIMPS Trigger: GCTGGGCATGATCTCAATAGCCTGAAGCATATGCCAGCACCATCTGATCAGAGTGAAACCTTGAAAGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | AGAGCTGTCTTTGCCAGGTTTGGAAATGCTGTGAATTaGGCACACCAGAAATCCTCAAGCTTCATTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAVFARFGNAVN*AHQKSSSFIVS Trigger: TGAGACAATGAAGCTTGAGGATTTCTGGTGTGCCCAATTCACAGCATTTCCAAACCTGGCAAAGACAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS TCA 72 bp | TTTCTAGAGCTGTCTTTGCCAGGTTTGGAAATGCTGTaGATTGGGCACACCAGAAATCCTCAAGCTTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FLELSLPGLEML*IGHTRNPQASL Trigger: CAATGAAGCTTGAGGATTTCTGGTGTGCCCAATTCACAGCATTTCCAAACCTGGCAAAGACAGCTCTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | GGCACCATCAGTACAAACAGAGCCACATACATCAAGTaGTATCTTATGCTTCAGAAAGAAGTCTCTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTISTNRATYIK*YLMLQKEVSEE Trigger: CTCTTCAGAGACTTCTTTCTGAAGCATAAGATAGCACTTGATGTATGTGGCTCTGTTTGTACTGATGGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | AACTCCAAATGCTTTCAAGGTTTCACTCTGATCAGATaGTGCTGGCATATGCTTCAGGCTATTGAGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: NSKCFQGFTLIR*CWHMLQAIEIM Trigger: CATGATCTCAATAGCCTGAAGCATATGCCAGCACCATCTGATCAGAGTGAAACCTTGAAAGCATTTGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | TTTCTTTTATATAGCGCACAAATGCCATTAGCTGACTaGAGTCATCCATGTCAGTTGTCTCAGCAAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FLLYSAQMPLAD*SHPCQLSQQAE Trigger: TTCAGCTTGCTGAGACAACTGACATGGATGACTGCAGTCAGCTAATGGCATTTGTGCGCTATATAAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | AGTATTTGGCCTCGGGAAAGCCACCTCATTTCAGTATaGAAAAGGAGGACACTATATTCTATGCCAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SIWPRESHLISV*KRRTLYSMPIS Trigger: AGAAATTGGCATAGAATATAGTGTCCTCCTTTTCCATACTGAAATGAGGTGGCTTTCCCGAGGCCAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | ATGGCACACAAAAATTCTCAGGTAGTATTCCAGAGATaGCACAGAATTTTGCTTACAGGGTTGTTAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: MAHKNSQVVFQR*HRILLTGLLGD Trigger: ATCTCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCTCTGGAATACTACCTGAGAATTTTTGTGTGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS GCA 72 bp | TTCTCTCTAGCTGATACTGTGTTCATCCCAGTCCTCTaGATAGATGCACTGAGTTCATTTAAGTGTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FSLADTVFIPVL*IDALSSFKCLN Trigger: ATTCAAACACTTAAATGAACTCAGTGCATCTATGCAGAGGACTGGGATGAACACAGTATCAGCTAGAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 90 bp | CCCAAAGTTTCCAAAGTTCTGTGCCAGAGAATGTGGCTTACAGGGTaGTTAGGAGATTTAATTATAAGAATGCATGCAAATAACAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PKVSKVLCQRMWLTG*LGDLIIRMHANNKQ Trigger: CTGCTTGTTATTTGCATGCATTCTTATAATTAAATCTCCTAACAACCCTGTAAGCCACATTCTCTGGCACAGAACTTTGGAAACTTTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523213.1 |
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| CDS CAA 90 bp | CTTGCCTCATTAAGATCTCCAATGGAAAAATATCCATGGAAGAAGTaGCTCAATTGTTGCAGATGCAGTGTTATTTCAGCTGCAATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LASLRSPMEKYPWKK*LNCCRCSVISAAMN Trigger: ATTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGAGATCTTAATGAGGCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | CTAACTTTTCAGCTACTGTATGAGGATTCTTCTCCTTaGCACATAAATACGCAAATTGATACGATGCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LTFQLLYEDSSP*HINTQIDTMLV Trigger: TACAAGCATCGTATCAATTTGCGTATTTATGTGCCAAGGAGAAGAATCCTCATACAGTAGCTGAAAAGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 72 bp | GCTATCTTATGCTTCAGAAAGAAGTCTCTGAAGAGATaGAACACATCTATTCCTTTCATGGATAGCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AILCFRKKSLKR*NTSIPFMDSCN Trigger: ATTGCAGCTATCCATGAAAGGAATAGATGTGTTCAATCTCTTCAGAGACTTCTTTCTGAAGCATAAGATAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 72 bp | TCCAATGGAAAAATATCCATGGAAGAAGTTGCTCAATaGTTGCAGATGCAGTGTTATTTCAGCTGCAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SNGKISMEEVAQ*LQMQCYFSCNE Trigger: TTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 90 bp | TCTCAGGTAGTATTCCAGAGATGCCACAGAATTTTGCTTACAGGGTaGTTAGGAGATTTAATTATAAGAATGCATGCAAATAACAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQVVFQRCHRILLTG*LGDLIIRMHANNKQ Trigger: CTGCTTGTTATTTGCATGCATTCTTATAATTAAATCTCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCTCTGGAATACTACCTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS CAA 90 bp | GCACACAAAAATTCTCAGGTAGTATTCCAGAGATGCCACAGAATTTaGCTTACAGGGTTGTTAGGAGATTTAATTATAAGAATGCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: AHKNSQVVFQRCHRI*LTGLLGDLIIRMHA Trigger: TGCATGCATTCTTATAATTAAATCTCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCTCTGGAATACTACCTGAGAATTTTTGTGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS CAA 90 bp | AAGATCTCCAATGGAAAAATATCCATGGAAGAAGTTGCTCAATTGTaGCAGATGCAGTGTTATTTCAGCTGCAATGAATATGCCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: KISNGKISMEEVAQL*QMQCYFSCNEYAFI Trigger: AATGAAGGCATATTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGAGATCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 90 bp | ATTAAGATCTCCAATGGAAAAATATCCATGGAAGAAGTTGCTCAATaGTTGCAGATGCAGTGTTATTTCAGCTGCAATGAATATGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IKISNGKISMEEVAQ*LQMQCYFSCNEYAF Trigger: GAAGGCATATTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCATTGGAGATCTTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | ACTTTAAGAGGACTGGCTTTGATATCTTCTAGAACTTaGTGTAAGATATCCTGGCTCATTTCATCAATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TLRGLALISSRT*CKISWLISSIL Trigger: TAGAATTGATGAAATGAGCCAGGATATCTTACAGCAAGTTCTAGAAGATATCAAAGCCAGTCCTCTTAAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS GCA 72 bp | ATGGAAAAATATCCATGGAAGAAGTTGCTCAATTGTTaGAGATGCAGTGTTATTTCAGCTGCAATGAATATG | + |
|
Preference number: 6 (lower is better) Translates to: MEKYPWKKLLNC*RCSVISAAMNM Trigger: CATATTCATTGCAGCTGAAATAACACTGCATCTGCAACAATTGAGCAACTTCTTCCATGGATATTTTTCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CCA 72 bp | GCTTTGATATCTTCTAGAACTTGCTGTAAGATATCCTaGCTCATTTCATCAATTCTAGAATGGATCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ALISSRTCCKIS*LISSILEWITS Trigger: TGATGTGATCCATTCTAGAATTGATGAAATGAGCCAGGATATCTTACAGCAAGTTCTAGAAGATATCAAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000408953.4 ENST00000523213.1 |
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| CDS CAA 72 bp | GTATTCCAGAGATGCCACAGAATTTTGCTTACAGGGTaGTTAGGAGATTTAATTATAAGAATGCATGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VFQRCHRILLTG*LGDLIIRMHAN Trigger: ATTTGCATGCATTCTTATAATTAAATCTCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCTCTGGAATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS CAA 72 bp | AATTCTCAGGTAGTATTCCAGAGATGCCACAGAATTTaGCTTACAGGGTTGTTAGGAGATTTAATTATAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSQVVFQRCHRI*LTGLLGDLIIR Trigger: TCTTATAATTAAATCTCCTAACAACCCTGTAAGCAAAATTCTGTGGCATCTCTGGAATACTACCTGAGAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408953.4 |
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| CDS CAA 72 bp | AATTCTCAGGTAGTATTCCAGAGATGCCACAGAATTTaGCTTAGAAAACATTCTATCTCCAAGATAAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSQVVFQRCHRI*LRKHSISKISK Trigger: CTTACTTATCTTGGAGATAGAATGTTTTCTAAGCAAAATTCTGTGGCATCTCTGGAATACTACCTGAGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523213.1 |
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