RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBED6CL (Homo sapiens)

Ensembl gene IDs: ENSG00000188707

Ensembl transcript IDs: ENST00000343855.6, ENST00000463441.5

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAGGGCTGACAACCCATCCAGGAGAGGCAAGGGAACAGGCTCCTaGGGCTGCCAGCCAGTGAGAGCAGAGTCTGTCCCCTCACCCCCA +
Preference number: 1 (lower is better)
Translates to: HRADNPSRRGKGTGS*GCQPVRAESVPSPP
Trigger: TGGGGGTGAGGGGACAGACTCTGCTCTCACTGGCTGGCAGCCCCAGGAGCCTGTTCCCTTGCCTCTCCTGGATGGGTTGTCAGCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 90 bp CCAAATAGGTTTAAGATTCTGGCCATGAGCATGTGGCGCCCAGGATaGAACACCCAGCTCTCTGCTTTGACCTATTACAGGCAGGGGCTC +
Preference number: 1 (lower is better)
Translates to: PNRFKILAMSMWRPG*NTQLSALTYYRQGL
Trigger: GAGCCCCTGCCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAAACCTATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTaGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCAC +
Preference number: 1 (lower is better)
Translates to: LRTYPTCQHMPTPHP*PLFEKASLLRACVH
Trigger: GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR TCA 90 bp TCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTTTTaGGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTTATCCACACA +
Preference number: 1 (lower is better)
Translates to: SHLPAHAHSTSLATF*ESKPLKGMCPLIHT
Trigger: TGTGTGGATAAGTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 90 bp CTACCCTTGGGGTTTCCTTCTCCCTACAGTGAAAGCCTCAGAAAGTaGTGCAATAGCTTATCCAGGCCCCCAAAGGCTGAGGACATATCC +
Preference number: 1 (lower is better)
Translates to: LPLGFPSPYSESLRK*CNSLSRPPKAEDIS
Trigger: GGATATGTCCTCAGCCTTTGGGGGCCTGGATAAGCTATTGCAGCACTTTCTGAGGCTTTCACTGTAGGGAGAAGGAAACCCCAAGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CCA 90 bp GACCCTTTCCTACCAAATAGGTTTAAGATTCTGGCCATGAGCATGTaGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTAC +
Preference number: 1 (lower is better)
Translates to: DPFLPNRFKILAMSM*RPGCNTQLSALTYY
Trigger: GTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAAACCTATTTGGTAGGAAAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTGTGAGCACCGGCACCTaGCATGTCTGCCATCCCACC +
Preference number: 2 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLVSTGT*HVCHPT
Trigger: GGTGGGATGGCAGACATGGCAGGTGCCGGTGCTCAC...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR TCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGTCTGCCATCCCACCCTaGGCGGACTGCAGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRSAIPP*ADCRVC
Trigger: ACAGACCCTGCAGTCCGCTCAGGGTGGGATGGCAGA...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCACCACCTGCCAGCACATaGCCACTCCACATCCTTGGC +
Preference number: 2 (lower is better)
Translates to: ISAATLPSDQESLGYLDAPPAST*PLHILG
Trigger: GCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGG...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCACCCATCCAATCCCACTaGTTCCTGGATCCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: ISAATLPSDQESLGYLDAPIQSH*FLDPRP
Trigger: GGGCCTGGGATCCAGGAACCAGTGGGATTGGATGGG...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR TCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCCCCAGCTCTCTGCTTTaGCCTATTACAGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSPSSLL*PITGRG
Trigger: GCCCCTGCCTGTAATAGGTCAAAGCAGAGAGCTGGG...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTCAACACCCAGCTCTCTaGTTTGACCTATTACAGGCA +
Preference number: 2 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLQHPAL*FDLLQA
Trigger: TGCCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTG...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR TCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCTTAAGATTCTGGCCATaGGCATGTGGCGCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSLRFWP*ACGAQD
Trigger: ATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAA...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACCTGGCCATGAGCATGTaGCGCCCAGGATGCAACACC +
Preference number: 2 (lower is better)
Translates to: PHPWPLFEKASLLRACVHLAMSM*RPGCNT
Trigger: GGTGTTGCATCCTGGGCGCCACATGCTCATGGCCAG...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCAGCCTCAGAAAGTGCTaGAATAGCTTATCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSSLRKC*NSLSRP
Trigger: GGGCCTGGATAAGCTATTGCAGCACTTTCTGAGGCT...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR TCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCACAATGGCTTCCACCTTaGGAGAAGAGTTTTGCTCTA +
Preference number: 2 (lower is better)
Translates to: ISAATLPSDQESLGYLDAQWLPP*EKSFAL
Trigger: TAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTG...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR TCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATGGCAATCTGTCAAGTaGGAAACTGACCCTTTCCTA +
Preference number: 2 (lower is better)
Translates to: ISAATLPSDQESLGYLDAWQSVK*ETDPFL
Trigger: TAGGAAAGGGTCAGTTTCTCACTTGACAGATTGCCA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGTTGAGAGAAGAGTTTTaGTCTACAAGGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRLREEF*STRVGL
Trigger: CAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAA...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGAACTTCCCTCTGGAAATaGCTATTCTACCCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRTSLWK*LFYPWG
Trigger: ACCCCAAGGGTAGAATAGCCATTTCCAGAGGGAAGT...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CAA 90 bp GTGGGGGTATGTGTGTACTTCCCTCTGGAAATGGCTATTCTACCCTaGGGGTTTCCTTCTCCCTACAGTGAAAGCCTCAGAAAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: VGVCVYFPLEMAILP*GFPSPYSESLRKCC
Trigger: GCAGCACTTTCTGAGGCTTTCACTGTAGGGAGAAGGAAACCCCAAGGGTAGAATAGCCATTTCCAGAGGGAAGTACACACATACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGGGCACCTGCCATGTCTaGCATCCCACCCTGAGCGGA +
Preference number: 2 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKGTCHV*HPTLSG
Trigger: TCCGCTCAGGGTGGGATGGCAGACATGGCAGGTGCC...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATCCATGATGAGTGTGTaGTACACACATCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: ISAATLPSDQESLGYLDASMMSV*YTHPFS
Trigger: AGAGAAAGGATGTGTGTAGCACACACTCATCATGGA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGTTTGCTCTACAAGGGTaGGGCTGTTCAGGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: RVSLFSAHTARRKGSNREFALQG*GCSGRQ
Trigger: TTGCCTCCCTGAACAGCCCCACCCTTGTAGAGCAAA...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAGAGGCGGGGTGTAGTTaGGGAACTGCTCCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTEAGCS*GTAPGW
Trigger: CCAACCTGGAGCAGTTCCCCAACTACACCCCGCCTC...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTTCAAGAAGAGGAGATaGTCAATGGCTTCCACCTTG +
Preference number: 2 (lower is better)
Translates to: PHPWPLFEKASLLRACVHFKKRR*SMASTL
Trigger: CAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTGAA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTGCTCTCCTAGCTAGCTaGTCAGTCCCTTCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLALLAS*SVPSVG
Trigger: ACCGACTGAAGGGACTGACCAGCTAGCTAGGAGAGC...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTAAAAAGACTGGTGTGTaGGGGTATGTGTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLKKTGV*GYVCTS
Trigger: GGAAGTACACACATACCCCCACACACCAGTCTTTTT...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAGAAGTAATCGGGAGATaGAAAATGACATCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTEVIGR*KMTSPR
Trigger: TCTGGGAGATGTCATTTTCCATCTCCCGATTACTTC...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp TTCACGGGCAGGGTGAGCACCGGCACCTGCCATGTCTaGCATCCCACCCTGAGCGGACTGCAGGGTCTGTAT +
Preference number: 3 (lower is better)
Translates to: FTGRVSTGTCHV*HPTLSGLQGLY
Trigger: ATACAGACCCTGCAGTCCGCTCAGGGTGGGATGGCAGACATGGCAGGTGCCGGTGCTCACCCTGCCCGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp AGTGACATGCTCCAAGTTAGGCCTGGAGCCTTCCCCTaGCTCTTCCGACCTGCATCTCAGCAGCCACCCTAC +
Preference number: 3 (lower is better)
Translates to: SDMLQVRPGAFP*LFRPASQQPPY
Trigger: GTAGGGTGGCTGCTGAGATGCAGGTCGGAAGAGGCAGGGGAAGGCTCCAGGCCTAACTTGGAGCATGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CCA 72 bp CATTTGAGGACTGGCGTCTCAGCTCTCCTAGCTAGCTaGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCT +
Preference number: 3 (lower is better)
Translates to: HLRTGVSALLAS*SVPSVGFSGHS
Trigger: AGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGCTAGCTAGGAGAGCTGAGACGCCAGTCCTCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp GGGTTTCCTTCTCCCTACAGTGAAAGCCTCAGAAAGTaGTGCAATAGCTTATCCAGGCCCCCAAAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: GFPSPYSESLRK*CNSLSRPPKAE
Trigger: CTCAGCCTTTGGGGGCCTGGATAAGCTATTGCAGCACTTTCTGAGGCTTTCACTGTAGGGAGAAGGAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CCA 72 bp TATCCCACCTGCCAGCACATGCCCACTCCACATCCTTaGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCA +
Preference number: 3 (lower is better)
Translates to: YPTCQHMPTPHP*PLFEKASLLRA
Trigger: TGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR TCA 72 bp ACCCTTTCCTACCAAATAGGTTTAAGATTCTGGCCATaGGCATGTGGCGCCCAGGATGCAACACCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: TLSYQIGLRFWP*ACGAQDATPSS
Trigger: AGAGCTGGGTGTTGCATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAAACCTATTTGGTAGGAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR TCA 72 bp CCAGCACATGCCCACTCCACATCCTTGGCCACTTTTTaGGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTT +
Preference number: 3 (lower is better)
Translates to: PAHAHSTSLATF*ESKPLKGMCPL
Trigger: AAGTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp GGGAACTGCTCCAGGTTGGCCTTCAAGAAGAGGAGATaGTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGC +
Preference number: 3 (lower is better)
Translates to: GNCSRLAFKKRR*SMASTLREEFC
Trigger: GCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTGAAGGCCAACCTGGAGCAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp TTTAAGATTCTGGCCATGAGCATGTGGCGCCCAGGATaGAACACCCAGCTCTCTGCTTTGACCTATTACAGG +
Preference number: 3 (lower is better)
Translates to: FKILAMSMWRPG*NTQLSALTYYR
Trigger: CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CAA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATCTGGAAATAGACTATaGGTAAGAACGCCATTTGAG +
Preference number: 3 (lower is better)
Translates to: ISAATLPSDQESLGYLDASGNRL*VRTPFE
Trigger: CTCAAATGGCGTTCTTACCAATAGTCTATTTCCAGA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR-3UTR CAA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAACCCAGCTCTCTGCTTaGACCTATTACAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTTQLSA*TYYRQG
Trigger: CCCCTGCCTGTAATAGGTCAAAGCAGAGAGCTGGGT...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR GCA 72 bp GGGCATGTGTCCACTTATCCACACAGACAAGGTGTATaGAAGGACCTTCATACCCACTTATGTTTTAACAGA +
Preference number: 3 (lower is better)
Translates to: GHVSTYPHRQGV*KDLHTHLCFNR
Trigger: TCTGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGATAAGTGGACACATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTCGCTGGCGCTGGAGCTaGGTGAGGAGTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLRWRWS*VRSPWA
Trigger: GGCCCAGGGACTCCTCACCCAGCTCCAGCGCCAGCG...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCGGCGCTGGAGCTGGGTaGGGAGTCCCTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSGAGAG*GVPGPP
Trigger: TGGAGGCCCAGGGACTCCTCACCCAGCTCCAGCGCC...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTGGGCGAAACAAGGGATaGGGGAACAGCCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLGRNKG*GNSPHP
Trigger: AGGGTGAGGGCTGTTCCCCCATCCCTTGTTTCGCCC...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTCCAGTGCGATGGGACTaGTTCGCTCCCTTGGATACC +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLPVRWD*FAPLDT
Trigger: GGTATCCAAGGGAGCGAATCAGTCCCATCGCACTGG...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTTCCAGCATCTGCAGCTaGCAGTCCTCCGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLSSICS*QSSAAP
Trigger: GGGAGCCGCGGAGGACTGGCAGCTGCAGATGCTGGA...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTAGCCTTAGAAATGGCTaGAGGTGGCCCTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLSLRNG*RWPWQC
Trigger: GCACTGCCAGGGCCACCTGCAGCCATTTCTAAGGCT...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTTCCCCAGCTGGTGCCTaGCCTTGTACTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLSPAGA*PCTLEG
Trigger: CCCTTCAAGAGTACAAGGGCAGGCACCAGCTGGGGA...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTCTGCCTCTTCCGACCTaGATCTCAGCAGCCACCCTA +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLLPLPT*ISAATL
Trigger: TAGGGTGGCTGCTGAGATGCAGGTCGGAAGAGGCAG...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCAAACAGCCCTCACCCTTaGCCGCCTGCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDANSPHP*PPAPGW
Trigger: CCAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTT...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGCCTCAGCCAGCTGGATaGCTGCGCCCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRPQPAG*LRPSPR
Trigger: TCGGGGAGAGGGGCGCAGCCATCCAGCTGGCTGAGG...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCTGGCCCAGTGGCTCTTaGTGGACAGCGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSWPSGS*WTASPR
Trigger: GCGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCA...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTGGGCAGCGAGGCGGTaGGGCCGGAAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHWAARR*GRKRRG
Trigger: GCCCCTTCGCTTCCGGCCGCACCGCCTCGCTGCCCA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTGCCAGCGTCCTGCCCTaGTGCAGCGCTGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLASVLP*CSADSA
Trigger: TGCTGAATCAGCGCTGCAGCAGGGCAGGACGCTGGC...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp TGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGGGTGGGCTAGGAGGCTaGGCTGGCGCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSMASTLREEFCSTRVGLGGLGG*AGAGAG
Trigger: CCCAGCTCCAGCGCCAGCGCAGCCTCCTAGCCCACC...CAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTGGCACCTGCCATGTCTaGCATCCCACCCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLGTCHV*HPTLSG
Trigger: TCCGCTCAGGGTGGGATGGCAGACATGGCAGGTGCC...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACCTGAGTGCGCAGGCGTaGGCAGCGAGGCGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHLSAQA*AARRCG
Trigger: GCCGCACCGCCTCGCTGCCCACGCCTGCGCACTCAG...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGCCGCCTGCTCCAGGCTaGGGCAGCTGCTCGATACCA +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRPPAPG*GSCSIP
Trigger: TGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGG...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGACCACCCCGGAGCTCTTaGCTACCCTGGTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRPPRSS*LPWWGP
Trigger: TGGACCCCACCAGGGTAGCCAAGAGCTCCGGGGTGG...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGGCACCCAAGGCCCCCTaGACGCCGGCGCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREAPKAP*TPALCV
Trigger: CACGCACAGCGCCGGCGTGCAGGGGGCCTTGGGTGC...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAGCTCCTCAAAGGGCTaGTGGGCTAGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRSSSKG*WARRLR
Trigger: GCGCAGCCTCCTAGCCCACCAGCCCTTTGAGGAGCT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGACCACGCACAGACCCCTaGGGCTTTGCAGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRPRTDP*GFAGDL
Trigger: CAAGTCCCCTGCAAAGCCCCAGGGGTCTGTGCGTGG...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGATCTTGGCTACCCTGGTaGGGTCCACGCACAGACCCC +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRSWLPW*GPRTDP
Trigger: GGGGTCTGTGCGTGGACCCCACCAGGGTAGCCAAGA...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAAGCATGAGGCCAGATaGCGGACCCAACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRKHEAR*RTQPTA
Trigger: GGCTGTGGGTTGGGTCCGTCATCTGGCCTCATGCTT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGCACAGCCAGCGTCCTaGCCTGCTGCAGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGAQPAS*PAAALI
Trigger: AATCAGCGCTGCAGCAGGGCAGGACGCTGGCTGTGC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTCCTCCCGGACTCGGTaGCACCCAAGGCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHSSRTR*HPRPPA
Trigger: TGCAGGGGGCCTTGGGTGCCACCGAGTCCGGGAGGA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCGAGGCGGGGTGTAGTTaGGGAACTGCTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSEAGCS*GTAPGW
Trigger: CCAACCTGGAGCAGTTCCCCAACTACACCCCGCCTC...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGCCCATCCAATCCCACTaGTTCCTGGATCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRPIQSH*FLDPRP
Trigger: GGGCCTGGGATCCAGGAACCAGTGGGATTGGATGGG...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCAAGTGAAACACAGGGCTaGCAACCCATCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDASETQG*QPIQER
Trigger: CCTCTCCTGGATGGGTTGTCAGCCCTGTGTTTCACT...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGTGGCTGGGGGACCGCTaGAGACCTGCGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREWLGDR*RPAAPT
Trigger: TGTGGGAGCCGCAGGTCTGCAGCGGTCCCCCAGCCA...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGCAGGCAGGGTGTaGAGCCAGCCGCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREMAGRV*SQPPGA
Trigger: GGCTCCAGGCGGCTGGCTGCACACCCTGCCTGCCAT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGAGTCCCAAGCAATGGGTaGCGGAGACAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRVPSNG*RRQAES
Trigger: ACTCTCTGCCTGTCTCCGCCACCCATTGCTTGGGAC...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGACCAGCCTTCCCCAGCTaGTGCCTGCCCTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGPAFPS*CLPLYS
Trigger: AGAGTACAAGGGCAGGCACCAGCTGGGGAAGGCTGG...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAAGGGTCCAGCAAGGTaGCCAGCACAAACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRKGPAR*PAQTPR
Trigger: GCGAGGAGTTTGTGCTGGCCACCTTGCTGGACCCTT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTACTTCCCTCTGGAAATaGCTATTCTACCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLTSLWK*LFYPWG
Trigger: ACCCCAAGGGTAGAATAGCCATTTCCAGAGGGAAGT...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTCTGTGCGTGCCAGGCTaGCCGCCCGAGTGCGACCCG +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLLCVPG*PPECDP
Trigger: CGGGTCGCACTCGGGCGGTCAGCCTGGCACGCACAG...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGAAGCGAAGGGGCCGTaGGGTCAACAGTCGGTAATC +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGEAKGP*GQQSVI
Trigger: GATTACCGACTGTTGACCTCACGGCCCCTTCGCTTC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAAGAGCTTGTTGAGCTaGCAGTCGGTGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRKSLLS*QSVQSC
Trigger: GCAGCTCTGCACCGACTGTCAGCTCAACAAGCTCTT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTTTAAGATTCTGGCCATaGGCATGTGGCGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLLRFWP*ACGAQD
Trigger: ATCCTGGGCGCCACATGCTCATGGCCAGAATCTTAA...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAAGCCACCCTACCCAGTaGCCAGGAGTCCTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGSHPTQ*PGVLRL
Trigger: TAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCT...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACGGTGGTGGTCACAGGTaGCAGTCTCCGGACGGATGG +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHGGGHR*QSPDGW
Trigger: CCATCCGTCCGGAGACTGGCACCTGTGACCACCACC...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACGAGTGGCTGCTGCTCTaGAGAGGCTCCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHEWLLL*RGSPWL
Trigger: AAGCCAGGGGGAGCCTCTGCAGAGCAGCAGCCACTC...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGAGGCCCCAGAGTGGCTaGTGCTCTGCAGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNRERPQSG*CSAEAP
Trigger: GGGAGCCTCTGCAGAGCAGCAGCCACTCTGGGGCCT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCCTTAGGCTACCTGGATaGAAGTCTTGCGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSLRLPG*KSCGGD
Trigger: GTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAG...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGTCCGCACGTGCAGATaGAAGGGGCCACAAAGACGA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGVRTCR*KGPQRR
Trigger: TCGTCTTTGTGGCCCCTTCCATCTGCACGTGCGGAC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCACCCAGCATCAGCCCTTaGAACTCCAACCAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDAPSISP*NSNQAL
Trigger: TAGAGCTTGGTTGGAGTTCCAAGGGCTGATGCTGGG...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACAGGAAGGCCCCAGAGTaGCTGCTGCTCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHRKAPE*LLLCRG
Trigger: GCCTCTGCAGAGCAGCAGCCACTCTGGGGCCTTCCT...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAAATCCCACTGGTTCCTaGATCCCAGGCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGNPTGS*IPGPQL
Trigger: GAGCTGAGGGCCTGGGATCCAGGAACCAGTGGGATT...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGGTAAGAACGCCATTTaGGGACTGGCGTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGGKNAI*GLASQL
Trigger: GAGCTGAGACGCCAGTCCTCAAATGGCGTTCTTACC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTGGTTCTTGGATCTCATaGAAGAAAGAATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLGSWIS*KKEFRA
Trigger: TGCCCTGAATTCTTTCTTGCATGAGATCCAAGAACC...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACGCCGGCGCTGTGCGTaGCAGGCTGACCGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTRRRCA*QADRPS
Trigger: ACTCGGGCGGTCAGCCTGGCACGCACAGCGCCGGCG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp TGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGCAAATGAATCTGCGGTaGCTGAGTGCGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CSMASTLREEFCSTRVGLQMNLR*LSAQAW
Trigger: CCACGCCTGCGCACTCAGGCACCGCAGATTCATTTG...CAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTGGACCGCTGCAGACCTaGGGCTCCCACACTCACCCC +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSGPLQT*GSHTHP
Trigger: GGGGTGAGTGTGGGAGCCGCAGGTCTGCAGCGGTCC...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTTCAGGGAGGCAAAGATaGTTTCAGAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLSGRQR*FQRRLL
Trigger: CAGGAGCCTTCTCTGAAAGCATCTTTGCCTCCCTGA...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGGTGAGCACCGGCACCTaGCATGTCTGCCATCCCACC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREVSTGT*HVCHPT
Trigger: GGTGGGATGGCAGACATGGCAGGTGCCGGTGCTCAC...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACCCACCTGCCAGCACATaGCCACTCCACATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHPPAST*PLHILG
Trigger: GCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGG...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGAACCCAGGGTGTCTCCTaGTGTTATCAGAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRTQGVS*CYQKGV
Trigger: GACCCCTTTCTGATAACACCAGGAGACACCCTGGGT...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATCAATACATGTTGGGTaGTGGTCACAGGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDASIHVG*WSQVPV
Trigger: GACTGGCACCTGTGACCACCACCCAACATGTATTGA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACAGAAATGGCTGCAGGTaGCCCTGGCAGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHRNGCR*PWQCPG
Trigger: TCCTGGGCACTGCCAGGGCCACCTGCAGCCATTTCT...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTGGCAGTGCCCAGGATaGTCTGGACACTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHWQCPG*SGHCEG
Trigger: ACCCTCACAGTGTCCAGATCATCCTGGGCACTGCCA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACTCTGCCATCCCACCCTaGGCGGACTGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYSAIPP*ADCRVC
Trigger: ACAGACCCTGCAGTCCGCTCAGGGTGGGATGGCAGA...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTGGTAACTTAGGCTATTaGTTCACAATCTTCAACCCT +
Preference number: 4 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLGNLGY*FTIFNP
Trigger: AGGGTTGAAGATTGTGAAGCAATAGCCTAAGTTACC...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACAGCGTCCTGCCCTGCTaGAGCGCTGATTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHSVLPC*SADSAS
Trigger: TGATGCTGAATCAGCGCTGCAGCAGGGCAGGACGCT...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGTCACCCTTGGCCGCCTaGTCCAGGCTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKSPLAA*SRLGQL
Trigger: CAGCTGCCCCAGCCTGGAGCAGGCGGCCAAGGGTGA...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGAGCTCTTGGCTACCCTaGTGGGGTCCACGCACAGAC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNRESSWLP*WGPRTD
Trigger: GTCTGTGCGTGGACCCCACCAGGGTAGCCAAGAGCT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTCCCAGTGGCTCTTGGTaGACAGCGAGCCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSPSGSW*TASPRF
Trigger: GAAGCGGGGGCTCGCTGTCCACCAAGAGCCACTGGG...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGGGTAAGACAGATAGATaGTGGCCAGGCTTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRGKTDR*WPGFSL
Trigger: AAGCGAGAAGCCTGGCCACCATCTATCTGTCTTACC...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGAGGACCCAGCCTATTaGACTACCTCATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGEDPAY*TTSCLP
Trigger: TGGCAAACATGAGGTAGTTCAATAGGCTGGGTCCTC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGACCTACATGCTTTGTCTaGGGCACTACCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGPTCFV*GTTPRI
Trigger: GATTCTAGGGGTAGTGCCTCAGACAAAGCATGTAGG...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTAGTTCACGGGCAGGGTaGGCACCGGCACCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLSSRAG*APAPAM
Trigger: CATGGCAGGTGCCGGTGCTCACCCTGCCCGTGAACT...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGCCCAGGAAAGCTACTaGGGCTGCTGTCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYAQESY*GCCHWR
Trigger: CCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGGC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGACCTCGTCCGCACGTaGAGATGGAAGGGGCCACAA +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYDLVRT*RWKGPQ
Trigger: TTGTGGCCCCTTCCATCTGCACGTGCGGACGAGGTC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACATCTGCGGTGCCTGAGTaGGCAGGCGTGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTSAVPE*AGVGSE
Trigger: CTCGCTGCCCACGCCTGCGCACTCAGGCACCGCAGA...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp TGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGCAAGCTCTATCCAAATaGAAACGAGGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CSMASTLREEFCSTRVGLQALSK*KRGQLG
Trigger: CCCCAGCTGCCCTCGTTTGCATTTGGATAGAGCTTG...CAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTCCCCAGAGTGGCTGCTaGTCTGCAGAGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLPQSGC*SAEAPP
Trigger: AGGGGGAGCCTCTGCAGAGCAGCAGCCACTCTGGGG...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATTCAAGAAGAGGAGATaGTCAATGGCTTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDAFKKRR*SMASTL
Trigger: CAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTGAA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGACAACACCCAGCTCTCTaGTTTGACCTATTACAGGCA +
Preference number: 4 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRQHPAL*FDLLQA
Trigger: TGCCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTG...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGCACAGACAAGGTGTATaGAAGGACCTTCATACCCAC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRHRQGV*KDLHTH
Trigger: GTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTG...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGTTGTTCAATACATGTTaGGTGGTGGTCACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRLFNTC*VVVTGA
Trigger: GGCACCTGTGACCACCACCCAACATGTATTGAACAA...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGAACCCCTCAGCCAGCTaGATGGCTGCGCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKNPSAS*MAAPLS
Trigger: GGAGAGGGGCGCAGCCATCCAGCTGGCTGAGGGGTT...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGTCGGTCGGCCCCCATaGCAGGATGGCCTCAATCTT +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYVGRPP*QDGLNL
Trigger: AAGATTGAGGCCATCCTGCCATGGGGGCCGACCGAC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGCCCTGCTGCAGCGCTaGTTCAGCATCACGGTAACT +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYALLQR*FSITVT
Trigger: AGTTACCGTGATGCTGAATCAGCGCTGCAGCAGGGC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGTGGCAATCTGTCAAGTaGGAAACTGACCCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRWQSVK*ETDPFL
Trigger: TAGGAAAGGGTCAGTTTCTCACTTGACAGATTGCCA...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACAAGTCTTGCGGGGGTaGCGGGCCACCCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTQVLRG*RATPFL
Trigger: AAGGAAGGGGGTGGCCCGTCACCCCCGCAAGACTTG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGAGACTTGGCTTTTCTaGCACAGTGTCCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGETWLF*HSVLLK
Trigger: TTTCAGGAGGACACTGTGGCAGAAAAGCCAAGTCTC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGAGGACATATCCCACCTaGCAGCACATGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNRERTYPT*QHMPTP
Trigger: TGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTCAGTCTCCGGACGGATaGCGGCCTAGATTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSQSPDG*RPRFPP
Trigger: GGGAGGAAATCTAGGCCGCCATCCGTCCGGAGACTG...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGTCCTCAAAGGGCTGGTaGGCTAGGAGGCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKSSKGW*ARRLRW
Trigger: CCAGCGCAGCCTCCTAGCCCACCAGCCCTTTGAGGA...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAAGCTGGGGCAGCACCTaGCTCAGAGAGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTSWGST*LREACA
Trigger: GGCACAGGCCTCTCTGAGCCAGGTGCTGCCCCAGCT...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAAAGACAGATAGATGGTaGCCAGGCTTCTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGKTDRW*PGFSLL
Trigger: AAGAAGCGAGAAGCCTGGCCACCATCTATCTGTCTT...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTTTGCTCTACAAGGGTaGGGCTGTTCAGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHFALQG*GCSGRQ
Trigger: TTGCCTCCCTGAACAGCCCCACCCTTGTAGAGCAAA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGACCCACTCCACATCCTTaGCCACTTTTTGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGPTPHP*PLFEKA
Trigger: TGCTTTCTCAAAAAGTGGCCAAGGATGTGGAGTGGG...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAAAAAGACTGGTGTGTaGGGGTATGTGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRKKTGV*GYVCTS
Trigger: GGAAGTACACACATACCCCCACACACCAGTCTTTTT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGACGCCATTTGAGGACTaGCGTCTCAGCTCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNRETPFED*RLSSPS
Trigger: GCTAGGAGAGCTGAGACGCCAGTCCTCAAATGGCGT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGCCTCTTCATGTGGTGTaGACAGCCAGCGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKPLHVV*TASVLP
Trigger: GGGCAGGACGCTGGCTGTGCACACCACATGAAGAGG...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCAAAATTAGACTAAGGTaGAGAGACACCAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSKIRLR*RDTKGH
Trigger: GTGTCCCTTGGTGTCTCTGCACCTTAGTCTAATTTT...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACCAGGCTGGGGCAGCTaGTCGATACCAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTPGWGS*SIPGSL
Trigger: CAGGCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGCTTGCTGAGGCTGTCTaGCGGGCTCCAGAATGTGGC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKLAEAV*RAPECG
Trigger: GCCACATTCTGGAGCCCGGCAGACAGCCTCAGCAAG...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTATGTGGCGCCCAGGATaGAACACCCAGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSMWRPG*NTQLSA
Trigger: AGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACAT...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCTCCATGATGAGTGTGTaGTACACACATCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSSMMSV*YTHPFS
Trigger: AGAGAAAGGATGTGTGTAGCACACACTCATCATGGA...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGAAAGAAGTAAAAGGATaGCTACTCCATAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRKEVKG*LLHRQS
Trigger: GCTCTGCCTATGGAGTAGCCATCCTTTTACTTCTTT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATACATGTTGGGTGGTaGTCACAGGTGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREIHVGW*SQVPVS
Trigger: GGAGACTGGCACCTGTGACCACCACCCAACATGTAT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGTGTCCCAAGCAATaGGTGGCGGAGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYKCPKQ*VAETGR
Trigger: TCTGCCTGTCTCCGCCACCCATTGCTTGGGACACTT...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGGCCAGGGGGTCATCCTaGGCTCCAACGGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKARGSS*APTVSF
Trigger: GAATGAGACCGTTGGAGCCCAGGATGACCCCCTGGC...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGCTCTCCTAGCTAGCTaGTCAGTCCCTTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYALLAS*SVPSVG
Trigger: ACCGACTGAAGGGACTGACCAGCTAGCTAGGAGAGC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGACACCACGGTTAGGTaGGGGTTTCCTAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYDTTVR*GFPNPR
Trigger: CCTAGGATTAGGAAACCCTCACCTAACCGTGGTGTC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACTGCCCTTGTACTCTTaGAGGGGCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTLPLYS*RGCCCS
Trigger: GGAGCAGCAGCAGCCCCTTCAAGAGTACAAGGGCAG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGCCCAGCTCTCTGCTTTaGCCTATTACAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKPSSLL*PITGRG
Trigger: GCCCCTGCCTGTAATAGGTCAAAGCAGAGAGCTGGG...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACTTTCTCCGGCCACTCTaGAACCCCCAAAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYFLRPL*NPQKDW
Trigger: CCAGTCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAA...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGACCACAACAGAGGGTATaGGTGTGTATTCGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGPQQRV*VCIRKR
Trigger: TCTTTTACGAATACACACGCATACCCTCTGTTGTGG...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACCTGGAGCCTTCCCCTaGCTCTTCCGACCTGCATCT +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTPGAFP*LFRPAS
Trigger: AGATGCAGGTCGGAAGAGGCAGGGGAAGGCTCCAGG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTCCATGGCCAGTGACATaGTCCAAGTTAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSPWPVT*SKLGLE
Trigger: CTCCAGGCCTAACTTGGAGCATGTCACTGGCCATGG...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTTCCAGGTCTCCCGCGTaGAAGGCTCATCTATCGGTC +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLSRSPA*KAHLSV
Trigger: GACCGATAGATGAGCCTTCCACGCGGGAGACCTGGA...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAGAGGGCCTCTTCATGTaGTGTGCACAGCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTEGLFM*CAQPAS
Trigger: GGACGCTGGCTGTGCACACCACATGAAGAGGCCCTC...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACACGTTTCCAAATTCTTaGGTTCAAGGGAGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHTFPNS*VQGSPV
Trigger: TACGGGGCTCCCTTGAACCCAAGAATTTGGAAACGT...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTAGGTCCGTCCTTCACTaGACTGTGCTAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSRSVLH*TVLGLP
Trigger: TGGTAGGCCTAGCACAGTCCAGTGAAGGACGGACCT...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCAAGACTAGGTTTCAACTaGATAGCATCAAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: ISAATLPSDQESLGYLDARLGFN*IASRLD
Trigger: ATCAAGTCTTGATGCTATCCAGTTGAAACCTAGTCT...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGATGATGCTGGCCCAGTaGCTCTTGGTGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKMMLAQ*LLVDSE
Trigger: CTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCAT...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGAGAAGTAATCGGGAGATaGAAAATGACATCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGEVIGR*KMTSPR
Trigger: TCTGGGAGATGTCATTTTCCATCTCCCGATTACTTC...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
3UTR CAA 72 bp TGTGTGTACTTCCCTCTGGAAATGGCTATTCTACCCTaGGGGTTTCCTTCTCCCTACAGTGAAAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: CVYFPLEMAILP*GFPSPYSESLR
Trigger: TCTGAGGCTTTCACTGTAGGGAGAAGGAAACCCCAAGGGTAGAATAGCCATTTCCAGAGGGAAGTACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACACAGCCACTACCTTCTaGGGGAGGAAATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYTATTF*GRKFLM
Trigger: CATGAGGAATTTCCTCCCTCAGAAGGTAGTGGCTGT...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACCAATGGCTTCCACCTTaGGAGAAGAGTTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHQWLPP*EKSFAL
Trigger: TAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTG...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACTCACCGATACGTCCGTaGATCTTAGCTTTTATTCCC +
Preference number: 4 (lower is better)
Translates to: PHPWPLFEKASLLRACVHSPIRP*ILAFIP
Trigger: GGGAATAAAAGCTAAGATGCACGGACGTATCGGTGA...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACCAGGCCCTCAGCTCTaGCCTAAAGGAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTPGPQL*PKGTLS
Trigger: GCTCAGAGTTCCTTTAGGGCAGAGCTGAGGGCCTGG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTGGAGGAAATTCCTCATaGGCAGGCCAGGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSGGNSS*AGQALL
Trigger: GAGTAAAGCCTGGCCTGCCCATGAGGAATTTCCTCC...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAGCAAACGAGGGCAGCTaGGGGAAATCACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTANEGS*GKSLRS
Trigger: GCTCCTGAGTGATTTCCCCCAGCTGCCCTCGTTTGC...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGGCTTTGCAGGGGACTTaGGGAGTTCAAAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: RVSLFSAHTARRKGSNREALQGT*GVQRVF
Trigger: GAATACTCTTTGAACTCCCCAAGTCCCCTGCAAAGC...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACTAGGGCATGGGACTTaGTTCACACACCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTLGHGT*FTHQVR
Trigger: ACGGACCTGGTGTGTGAAGCAAGTCCCATGCCCTAG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACTTGAGAGAAGAGTTTTaGTCTACAAGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYLREEF*STRVGL
Trigger: CAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAA...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAACTGATTCGCTCCCTTaGATACCGTACCTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTTDSLP*IPYLGP
Trigger: GGGACCGAGGTACGGTATCCAAGGGAGCGAATCAGT...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTCAGAGAAGGCTCCTGTaGGGGGTAAGACAGATAGAT +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSQRRLL*GVRQID
Trigger: ATCTATCTGTCTTACCCCCCACAGGAGCCTTCTCTG...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGAGCCTCAGAAAGTGCTaGAATAGCTTATCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKSLRKC*NSLSRP
Trigger: GGGCCTGGATAAGCTATTGCAGCACTTTCTGAGGCT...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACGAAAGCCTCAGAAAGTaGTGCAATAGCTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYESLRK*CNSLSR
Trigger: CCTGGATAAGCTATTGCAGCACTTTCTGAGGCTTTC...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGACTCTTCTCAGGTACTaGGCAACCTCAGGGATAAGT +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKTLLRY*ATSGIS
Trigger: ACTTATCCCTGAGGTTGCTCAGTACCTGAGAAGAGT...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACATCCTTCTCCCTACAGTaGAAGCCTCAGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTSFSLQ*KPQKVL
Trigger: CAGCACTTTCTGAGGCTTTCACTGTAGGGAGAAGGA...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTGCCCTAAAGGAACTCTaGGCAATCCATGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLALKEL*AIHDEC
Trigger: ACACTCATCATGGATTGCTCAGAGTTCCTTTAGGGC...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTGTAATCGTTTATCGGTaGGGCCTTAGAGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLVIVYR*GLRERT
Trigger: GGTCCTTTCTCTAAGGCCGCACCGATAAACGATTAC...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGTCCTTGGCCACTTTTTaGGAAAGCAAGCCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKSLATF*ESKPLK
Trigger: CTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGA...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR GCA 90 bp CGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGAAAATGACATCTGAACTACCTCATGTTTaGCAGAGACTTGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RHILLDVKEVIGRWKMTSELPHV*QRLGFS
Trigger: AGAAAAGCCAAGTCTCTGGCAAACATGAGGTAGTTC...AGATGTCATTTTCCATCTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTGTGTGTACTTCCCTCTaGAAATGGCTATTCTACCCT +
Preference number: 4 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLVCTSL*KWLFYP
Trigger: AGGGTAGAATAGCCATTTCCAGAGGGAAGTACACAC...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACAGATAGCATCAAGACTTaGTCTCTGGCTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTDSIKT*SLASGR
Trigger: TCTTCCACTAGCCAGAGATCAAGTCTTGATGCTATC...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR TCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGACAGTACCTAGGGTATaGTCTCAATGTAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKTVPRV*SQCKRG
Trigger: CCCTCTTTTACATTGAGATCATACCCTAGGTACTGT...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CCA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGCTAAGAGAGGGTTCTTaGATCTCATGCAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKLREGS*ISCKKE
Trigger: TTCTTTCTTGCATGAGATCCAAGAACCCTCTCTTAG...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 90 bp GTGGCACCCAAGGCCCCCTGCACGCCGGCGCTGTGCGTGCCAGGCTaGCCGCCCGAGTGCGACCCGGACCTCGTCCGCACGTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: VAPKAPCTPALCVPG*PPECDPDLVRTCRW
Trigger: CCATCTGCACGTGCGGACGAGGTCCGGGTCGCACTCGGGCGGTCAGCCTGGCACGCACAGCGCCGGCGTGCAGGGGGCCTTGGGTGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp TCCCAGCGCCGCAGGCCTGAGCTCCCGGAACGCGCCCAGGGGGCCTaGCCAAAGGCCGTAGTGGGCGCTCTGGATTCCGGGATGCGCCAG +
Preference number: 5 (lower is better)
Translates to: SQRRRPELPERAQGA*PKAVVGALDSGMRQ
Trigger: CTGGCGCATCCCGGAATCCAGAGCGCCCACTACGGCCTTTGGCCAGGCCCCCTGGGCGCGTTCCGGGAGCTCAGGCCTGCGGCGCTGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS GCA 90 bp CTGACCCCTGGGCCGCGTGCCCACCACCCAACTTGTTGGCCAGCGTaGTTCTCCCAGCGCCGCAGGCCTGAGCTCCCGGAACGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LTPGPRAHHPTCWPA*FSQRRRPELPERAQ
Trigger: CTGGGCGCGTTCCGGGAGCTCAGGCCTGCGGCGCTGGGAGAAGCACGCTGGCCAACAAGTTGGGTGGTGGGCACGCGGCCCAGGGGTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS CCA 90 bp TGGCGGCCCCTGACCCCTGGGCCGCGTGCCCACCACCCAACTTGTTaGCCAGCGTGCTTCTCCCAGCGCCGCAGGCCTGAGCTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: WRPLTPGPRAHHPTC*PACFSQRRRPELPE
Trigger: TTCCGGGAGCTCAGGCCTGCGGCGCTGGGAGAAGCACGCTGGCCAACAAGTTGGGTGGTGGGCACGCGGCCCAGGGGTCAGGGGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS GCA 90 bp AGCAGGAAGCTACGGCCCAGCCACAGGCTGGCCTGCTCCAGCATCTaGAGCTGCCAGTCCTCCGCGGCTCCCTCCAGGGGCAGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: SRKLRPSHRLACSSI*SCQSSAAPSRGRPR
Trigger: GCGAGGCCTGCCCCTGGAGGGAGCCGCGGAGGACTGGCAGCTGCAGATGCTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp AATCTGAGGGGTGGAGCCGGCAGCCTGCGGAGCCACTGGCCAAGCTaGGAAGTCCGGCGCAACTCCGCACCGCAGAGCCGGCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NLRGGAGSLRSHWPS*EVRRNSAPQSRRLL
Trigger: GAGGAGGCGCCGGCTCTGCGGTGCGGAGTTGCGCCGGACTTCCCAGCTTGGCCAGTGGCTCCGCAGGCTGCCGGCTCCACCCCTCAGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS TCA 90 bp CCACCCAACTTGTTGGCCAGCGTGCTTCTCCCAGCGCCGCAGGCCTaGGCTCCCGGAACGCGCCCAGGGGGCCTGGCCAAAGGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: PPNLLASVLLPAPQA*APGTRPGGLAKGRS
Trigger: ACTACGGCCTTTGGCCAGGCCCCCTGGGCGCGTTCCGGGAGCTCAGGCCTGCGGCGCTGGGAGAAGCACGCTGGCCAACAAGTTGGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS GCA 90 bp GGCCGCCTGCTCCAGGCTGGGGCAGCTGCTCGATACCAGGAAGCCTaGCAGCAGGAAGCTACGGCCCAGCCACAGGCTGGCCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRLLQAGAAARYQEA*QQEATAQPQAGLLQ
Trigger: CTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGCAGGCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp AGGAAGCCTGCCAGCAGGAAGCTACGGCCCAGCCACAGGCTGGCCTaGTCCAGCATCTGCAGCTGCCAGTCCTCCGCGGCTCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RKPASRKLRPSHRLA*SSICSCQSSAAPSR
Trigger: CCTGGAGGGAGCCGCGGAGGACTGGCAGCTGCAGATGCTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGCAGGCTTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp GGGAACAGCCCTCACCCTTGGCCGCCTGCTCCAGGCTGGGGCAGCTaGTCGATACCAGGAAGCCTGCCAGCAGGAAGCTACGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GNSPHPWPPAPGWGS*SIPGSLPAGSYGPA
Trigger: GGCTGGGCCGTAGCTTCCTGCTGGCAGGCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp CCCCACCCAGCTCCAGGCCAGTGCGATGGGACTGATTCGCTCCCTTaGATACCGTACCTCGGTCCCCCGTCTCCCGGGTGCCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: PHPAPGQCDGTDSLP*IPYLGPPSPGCPQH
Trigger: GTGCTGTGGGCACCCGGGAGACGGGGGACCGAGGTACGGTATCCAAGGGAGCGAATCAGTCCCATCGCACTGGCCTGGAGCTGGGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp ATACCAGGAAGCCTGCCAGCAGGAAGCTACGGCCCAGCCACAGGCTaGCCTGCTCCAGCATCTGCAGCTGCCAGTCCTCCGCGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: IPGSLPAGSYGPATG*PAPASAAASPPRLP
Trigger: AGGGAGCCGCGGAGGACTGGCAGCTGCAGATGCTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGCAGGCTTCCTGGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp CGAGGCAGTGGGCGAAACAAGGGATGGGGGAACAGCCCTCACCCTTaGCCGCCTGCTCCAGGCTGGGGCAGCTGCTCGATACCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: RGSGRNKGWGNSPHP*PPAPGWGSCSIPGS
Trigger: GCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTTCCCCCATCCCTTGTTTCGCCCACTGCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp TGGTCCAAGAGCTCCTCAAAGGGCTGGTGGGCTAGGAGGCTGCGCTaGCGCTGGAGCTGGGTGAGGAGTCCCTGGGCCTCCACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: WSKSSSKGWWARRLR*RWSWVRSPWASTEP
Trigger: AGGCTCTGTGGAGGCCCAGGGACTCCTCACCCAGCTCCAGCGCCAGCGCAGCCTCCTAGCCCACCAGCCCTTTGAGGAGCTCTTGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp TGGCTCAGAGAGGCCTGTGCCGCACTCGCCTCGCGGACCACCATCTaGAAGGGCTACAGGAGCTTGCTGAGGCTGTCTGCCGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WLREACAALASRTTI*KGYRSLLRLSAGLQ
Trigger: CTGGAGCCCGGCAGACAGCCTCAGCAAGCTCCTGTAGCCCTTCCAGATGGTGGTCCGCGAGGCGAGTGCGGCACAGGCCTCTCTGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp ATCCAAATGAATCTGAGGGGTGGAGCCGGCAGCCTGCGGAGCCACTaGCCAAGCTGGGAAGTCCGGCGCAACTCCGCACCGCAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: IQMNLRGGAGSLRSH*PSWEVRRNSAPQSR
Trigger: CCGGCTCTGCGGTGCGGAGTTGCGCCGGACTTCCCAGCTTGGCCAGTGGCTCCGCAGGCTGCCGGCTCCACCCCTCAGATTCATTTGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS TCA 90 bp CAAAGGGCTGGTGGGCTAGGAGGCTGCGCTGGCGCTGGAGCTGGGTaGGGAGTCCCTGGGCCTCCACAGAGCCTTAGAAATGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QRAGGLGGCAGAGAG*GVPGPPQSLRNGCR
Trigger: CCTGCAGCCATTTCTAAGGCTCTGTGGAGGCCCAGGGACTCCTCACCCAGCTCCAGCGCCAGCGCAGCCTCCTAGCCCACCAGCCCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTGAACAGCCCTCACCCTaGGCCGCCTGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLEQPSP*AACSRL
Trigger: CAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTTC...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp GAAAGTTTCTCACCAGGGAGTCGAGGCAGTGGGCGAAACAAGGGATaGGGGAACAGCCCTCACCCTTGGCCGCCTGCTCCAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ESFSPGSRGSGRNKG*GNSPHPWPPAPGWG
Trigger: GCCCCAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTTCCCCCATCCCTTGTTTCGCCCACTGCCTCGACTCCCTGGTGAGAAACTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp CAATACATGTTGGGTGGTGGTCACAGGTGCCAGTCTCCGGACGGATaGCGGCCTAGATTTCCTCCCGGACTCGGTGGCACCCAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: QYMLGGGHRCQSPDG*RPRFPPGLGGTQGP
Trigger: GGGGCCTTGGGTGCCACCGAGTCCGGGAGGAAATCTAGGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp ATCTCAGCAGCCACCCTACCCAGTGACCAGGAGTCCTTAGGCTACCTGGATGCATCCACCCCGGAGCTCTaGGCTACCCTGGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ISAATLPSDQESLGYLDASTPEL*ATLVGS
Trigger: GGACCCCACCAGGGTAGCCAAGAGCTCCGGGGTGGA...TGCATCCAGGTAGCCTAAGGACTCCTGGTCACTGGGTAGGGTGGCTGCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp GCTGGTCAGTCCCTTCAGTCGGTTTCTCCGGCCACTCTGAAACCCCCAAAAAGACTGGCCCAGTGGCTCTaGGTGGACAGCGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: AGQSLQSVSPATLKPPKRLAQWL*VDSEPP
Trigger: CGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCAG...TCTTTTTGGGGGTTTCAGAGTGGCCGGAGAAACCGACTGAAGGGACTGACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp GACCTCCAAGCCCTTGTTCAATACATGTTGGGTGGTGGTCACAGGTaGCAGTCTCCGGACGGATGGCGGCCTAGATTTCCTCCCGGACTC +
Preference number: 5 (lower is better)
Translates to: DLQALVQYMLGGGHR*QSPDGWRPRFPPGL
Trigger: GAGTCCGGGAGGAAATCTAGGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp AATTCTTGGGTTCAAGGGAGCCCCGTAAGAGAGGGCCTCTTCATGTaGTGTGCACAGCCAGCGTCCTGCCCTGCTGCAGCGCTGATTCAG +
Preference number: 5 (lower is better)
Translates to: NSWVQGSPVREGLFM*CAQPASCPAAALIQ
Trigger: CTGAATCAGCGCTGCAGCAGGGCAGGACGCTGGCTGTGCACACCACATGAAGAGGCCCTCTCTTACGGGGCTCCCTTGAACCCAAGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS-3UTR CAA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGCCTCACAGCCCACTCTaGGGACAGGGTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRPHSPL*GQGAGK
Trigger: CTTCCCAGCACCCTGTCCCAAGAGTGGGCTGTGAGG...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp CCCGTAAGAGAGGGCCTCTTCATGTGGTGTGCACAGCCAGCGTCCTaGCCTGCTGCAGCGCTGATTCAGCATCACGGTAACTTAGGCTAT +
Preference number: 5 (lower is better)
Translates to: PVREGLFMWCAQPAS*PAAALIQHHGNLGY
Trigger: ATAGCCTAAGTTACCGTGATGCTGAATCAGCGCTGCAGCAGGGCAGGACGCTGGCTGTGCACACCACATGAAGAGGCCCTCTCTTACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS CCA 90 bp TGCGGCCTTAGAGAAAGGACCTCCAAGCCCTTGTTCAATACATGTTaGGTGGTGGTCACAGGTGCCAGTCTCCGGACGGATGGCGGCCTA +
Preference number: 5 (lower is better)
Translates to: CGLRERTSKPLFNTC*VVVTGASLRTDGGL
Trigger: TAGGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCCTTTCTCTAAGGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp GTCTCATTCTCCCACAGATACTTCTTGACAATGATGCTGGCCCAGTaGCTCTTGGTGGACAGCGAGCCCCCGCTTCTCTCAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VSFSHRYFLTMMLAQ*LLVDSEPPLLSEAS
Trigger: GCTGGCCTCTGAGAGAAGCGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCATTGTCAAGAAGTATCTGTGGGAGAATGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp GAGTCCTTAGGCTACCTGGATGCAAGTCTTGCGGGGGTGACGGGCCACCCCCTTAGGACCTCCAAGCCCTaGTTCAATACATGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: ESLGYLDASLAGVTGHPLRTSKP*FNTCWV
Trigger: CACCCAACATGTATTGAACAAGGGCTTGGAGGTCCT...AAGGGGGTGGCCCGTCACCCCCGCAAGACTTGCATCCAGGTAGCCTAAGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp GGCTCATCTATCGGTCGGTTCAGGAAATCCACCCAGGGTGTCTCCTaGTGTTATCAGAAAGGGGTCCCGATCCAGGCCCTAAGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GSSIGRFRKSTQGVS*CYQKGVPIQALREG
Trigger: ACCCTCTCTTAGGGCCTGGATCGGGACCCCTTTCTGATAACACCAGGAGACACCCTGGGTGGATTTCCTGAACCGACCGATAGATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp GGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAAGGGTGGGGCTGTTCAGGGACCTGCCCTTGTACTCTaGAAGGGGCTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GFHLERRVLLYKGGAVQGPALVL*KGLLLL
Trigger: GAGCAGCAGCAGCCCCTTCAAGAGTACAAGGGCAGG...TCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTGGGAACTGCTCCAGGTaGGCCTTCAAGAAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLGNCSR*AFKKRR
Trigger: TCTCCTCTTCTTGAAGGCCAACCTGGAGCAGTTCCC...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp GGACCCAACCCACAGCCACTACCTTCTGAGGGAGGAAATTCCTCATaGGCAGGCCAGGCTTTACTCACATCTTGTTTCCTCACAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GPNPQPLPSEGGNSS*AGQALLTSCFLTAH
Trigger: GTGGGCTGTGAGGAAACAAGATGTGAGTAAAGCCTGGCCTGCCCATGAGGAATTTCCTCCCTCAGAAGGTAGTGGCTGTGGGTTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 90 bp TGGGGCTGTTCAGGGAGGCAAAGATGCTTTCAGAGAAGGCTCCTGTaGGGGGTAAGACAGATAGATGGTGGCCAGGCTTCTCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WGCSGRQRCFQRRLL*GVRQIDGGQASRFF
Trigger: GAAGAAGCGAGAAGCCTGGCCACCATCTATCTGTCTTACCCCCCACAGGAGCCTTCTCTGAAAGCATCTTTGCCTCCCTGAACAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTGGCTTTACTCACATCTaGTTTCCTCACAGCCCACTC +
Preference number: 5 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLGFTHI*FPHSPL
Trigger: GAGTGGGCTGTGAGGAAACAAGATGTGAGTAAAGCC...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CCCAGGAAAGCTACTGAGGCTGCTGTCACTGGAGGAAGAAACCCCAACGTTTCCAACGTTTCCAAATTCTaGGGTTCAAGGGAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: PRKATEAAVTGGRNPNVSNVSKF*GSREPR
Trigger: ACGGGGCTCCCTTGAACCCAAGAATTTGGAAACGTT...GGAAACGTTGGGGTTTCTTCCTCCAGTGACAGCAGCCTCAGTAGCTTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CCACATCCTTGGCCACTTTTTGAGAAAGCAAGCCTCTTAAGGGCATGTGTCCACGCCTCAATCTTCCCCTaGAAGCAAGGGTCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PHPWPLFEKASLLRACVHASIFP*KQGSSK
Trigger: CTTGCTGGACCCTTGCTTCAAGGGGAAGATTGAGGC...GTGGACACATGCCCTTAAGAGGCTTGCTTTCTCAAAAAGTGGCCAAGGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGAGGGTCTGTATCCCCTaGGCCAGGTCACCACTAGAG +
Preference number: 5 (lower is better)
Translates to: RVSLFSAHTARRKGSNRERVCIP*ARSPLE
Trigger: CTCTAGTGGTGACCTGGCCAAGGGGATACAGACCCT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp GTCTCCCGGGTGCCCACAGCACTAGCTGTGTCACCGATACGTCCGTaGATCTTAGCTTTTATTCCCCTTAATGTTGTTTGTGCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: VSRVPTALAVSPIRP*ILAFIPLNVVCAVV
Trigger: GACAACAGCACAAACAACATTAAGGGGAATAAAAGCTAAGATGCACGGACGTATCGGTGACACAGCTAGTGCTGTGGGCACCCGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CTGAGGACATATCCCACCTGCCAGCACATGCCCACTCCACATCCTTGGCCACTTTCTGGAAATAGACTATaGGTAAGAACGCCATTTGAG +
Preference number: 5 (lower is better)
Translates to: LRTYPTCQHMPTPHPWPLSGNRL*VRTPFE
Trigger: CTCAAATGGCGTTCTTACCAATAGTCTATTTCCAGA...AAGTGGCCAAGGATGTGGAGTGGGCATGTGCTGGCAGGTGGGATATGTCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 90 bp AAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTaGTCTACAAGGGTGGGGCTGTTCAGGGAGGCAAAGATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KKRRCSMASTLREEF*STRVGLFREAKMLS
Trigger: TGAAAGCATCTTTGCCTCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp AGCATGTGGCGCCCAGGATGCAACACCCAGCTCTCTGCTTTGACCTATTACAGGATGTTGTTTGTGCTGTaGTCTACTTTAATCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SMWRPGCNTQLSALTYYRMLFVL*STLISV
Trigger: GACCGAGATTAAAGTAGACAACAGCACAAACAACAT...CCTGTAATAGGTCAAAGCAGAGAGCTGGGTGTTGCATCCTGGGCGCCACATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACAGGAGCCTACATGCTTaGTCTGAGGCACTACCCCTA +
Preference number: 5 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYRSLHA*SEALPL
Trigger: TAGGGGTAGTGCCTCAGACAAAGCATGTAGGCTCCT...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGGCTATTCTACCCTaGGGGTTTCCTTCTCCCTAC +
Preference number: 5 (lower is better)
Translates to: RVSLFSAHTARRKGSNREMAILP*GFPSPY
Trigger: GTAGGGAGAAGGAAACCCCAAGGGTAGAATAGCCAT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACCTTGTTCAATACATGTaGGGTGGTGGTCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYLVQYM*GGGHRC
Trigger: GCACCTGTGACCACCACCCAACATGTATTGAACAAG...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTGTGCAGCTGGCACTGTaGAGAGCCAACCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLVQLAL*RANLES
Trigger: GGATTCAAGGTTGGCTCTCAACAGTGCCAGCTGCAC...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp AGAGTAAGCCTCTTCTCGGCACATACTGCTAGACGTAAAGGAAGTAATCGGGAGATGTTTGCCAGAGACTaGGCTTTTCTGCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: RVSLFSAHTARRKGSNREMFARD*AFLPQC
Trigger: ACACTGTGGCAGAAAAGCCAAGTCTCTGGCAAACAT...CTCCCGATTACTTCCTTTACGTCTAGCAGTATGTGCCGAGAAGAGGCTTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp TCCATGATGAGTGTGTGCTACACACATCCTTTCTCTCTTCCAAATAAGGGACTTTCCCAGCATCAGCCCTaGGAACTCCAACCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SMMSVCYTHPFSLPNKGLSQHQP*ELQPSS
Trigger: AGAGCTTGGTTGGAGTTCCAAGGGCTGATGCTGGGA...AAGTCCCTTATTTGGAAGAGAGAAAGGATGTGTGTAGCACACACTCATCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTTGCTCTACTCAATGGCTTCCACCTaGAGAGAAGAGTTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: QEEEMLNGFHLERRVLLYSMAST*REEFCS
Trigger: AGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGA...GTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACATCCCACAGATACTTCTaGACAATGATGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTSHRYF*TMMLAQ
Trigger: CTGGGCCAGCATCATTGTCAAGAAGTATCTGTGGGA...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp AGAGCATCACATGTACAAAGCCACGTAGTACAAAATTCACAGTCACCTACGAAGCTGGCTAGTGGAAGATaGAAAATTAGACTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RASHVQSHVVQNSQSPTKLASGR*KIRLRC
Trigger: GCACCTTAGTCTAATTTTCAATCTTCCACTAGCCAG...CTTCGTAGGTGACTGTGAATTTTGTACTACGTGGCTTTGTACATGTGATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS-3UTR CAA 90 bp ATCCACACAGACAAGGTGTATGCAAGGACCTTCATACCCACTTATGTTTTAACACGTAAAAGACGTGACTaGGGAACGCTAAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: IHTDKVYARTFIPTYVLTRKRRD*GTLNFK
Trigger: CTTAAAATTTAGCGTTCCCAAGTCACGTCTTTTACG...TGTTAAAACATAAGTGGGTATGAAGGTCCTTGCATACACCTTGTCTGTGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp AAGGCCCCCTGCACGCCGGCGCTGTGCGTGCCAGGCTaGCCGCCCGAGTGCGACCCGGACCTCGTCCGCACG +
Preference number: 6 (lower is better)
Translates to: KAPCTPALCVPG*PPECDPDLVRT
Trigger: CGTGCGGACGAGGTCCGGGTCGCACTCGGGCGGTCAGCCTGGCACGCACAGCGCCGGCGTGCAGGGGGCCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp TGGCACCCAAGGCCCCCTGCACGCCGGCGCTGTGCGTaGCAGGCTGACCGCCCGAGTGCGACCCGGACCTCG +
Preference number: 6 (lower is better)
Translates to: WHPRPPARRRCA*QADRPSATRTS
Trigger: CGAGGTCCGGGTCGCACTCGGGCGGTCAGCCTGGCACGCACAGCGCCGGCGTGCAGGGGGCCTTGGGTGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GCCCGCCGCCTGGCGGCCCCTGACCCCTGGGCCGCGTaGCCACCACCCAACTTGTTGGCCAGCGTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ARRLAAPDPWAA*PPPNLLASVLL
Trigger: GAGAAGCACGCTGGCCAACAAGTTGGGTGGTGGGCACGCGGCCCAGGGGTCAGGGGCCGCCAGGCGGCGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463441.5
CDS GCA 72 bp CGGTGCCTGAGTGCGCAGGCGTGGGCAGCGAGGCGGTaGGGCCGGAAGCGAAGGGGCCGTGAGGTCAACAGT +
Preference number: 6 (lower is better)
Translates to: RCLSAQAWAARR*GRKRRGREVNS
Trigger: ACTGTTGACCTCACGGCCCCTTCGCTTCCGGCCGCACCGCCTCGCTGCCCACGCCTGCGCACTCAGGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GCGCAGCTGGGGCAGCACCTGGCTCAGAGAGGCCTGTaGCGCACTCGCCTCGCGGACCACCATCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: AQLGQHLAQRGL*RTRLADHHLEG
Trigger: CCCTTCCAGATGGTGGTCCGCGAGGCGAGTGCGGCACAGGCCTCTCTGAGCCAGGTGCTGCCCCAGCTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GCCAGCAGGAAGCTACGGCCCAGCCACAGGCTGGCCTaGTCCAGCATCTGCAGCTGCCAGTCCTCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: ASRKLRPSHRLA*SSICSCQSSAA
Trigger: AGCCGCGGAGGACTGGCAGCTGCAGATGCTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp CTCCAGGCTGGGGCAGCTGCTCGATACCAGGAAGCCTaGCAGCAGGAAGCTACGGCCCAGCCACAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: LQAGAAARYQEA*QQEATAQPQAG
Trigger: GCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGCAGGCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp AGCCTGCCAGCAGGAAGCTACGGCCCAGCCACAGGCTaGCCTGCTCCAGCATCTGCAGCTGCCAGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: SLPAGSYGPATG*PAPASAAASPP
Trigger: CGGAGGACTGGCAGCTGCAGATGCTGGAGCAGGCCAGCCTGTGGCTGGGCCGTAGCTTCCTGCTGGCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp CCTCACCCTTGGCCGCCTGCTCCAGGCTGGGGCAGCTaGTCGATACCAGGAAGCCTGCCAGCAGGAAGCTAC +
Preference number: 6 (lower is better)
Translates to: PHPWPPAPGWGS*SIPGSLPAGSY
Trigger: GTAGCTTCCTGCTGGCAGGCTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGGCCAAGGGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp CAAGGGATGGGGGAACAGCCCTCACCCTTGGCCGCCTaGTCCAGGCTGGGGCAGCTGCTCGATACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: QGMGEQPSPLAA*SRLGQLLDTRK
Trigger: CTTCCTGGTATCGAGCAGCTGCCCCAGCCTGGAGCAGGCGGCCAAGGGTGAGGGCTGTTCCCCCATCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp GCTCCAGGCCAGTGCGATGGGACTGATTCGCTCCCTTaGATACCGTACCTCGGTCCCCCGTCTCCCGGGTGC +
Preference number: 6 (lower is better)
Translates to: APGQCDGTDSLP*IPYLGPPSPGC
Trigger: GCACCCGGGAGACGGGGGACCGAGGTACGGTATCCAAGGGAGCGAATCAGTCCCATCGCACTGGCCTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp GAGACCCAGTGGTCCAAGAGCTCCTCAAAGGGCTGGTaGGCTAGGAGGCTGCGCTGGCGCTGGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: ETQWSKSSSKGW*ARRLRWRWSWV
Trigger: CACCCAGCTCCAGCGCCAGCGCAGCCTCCTAGCCCACCAGCCCTTTGAGGAGCTCTTGGACCACTGGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp GAGGCCTGTGCCGCACTCGCCTCGCGGACCACCATCTaGAAGGGCTACAGGAGCTTGCTGAGGCTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: EACAALASRTTI*KGYRSLLRLSA
Trigger: GGCAGACAGCCTCAGCAAGCTCCTGTAGCCCTTCCAGATGGTGGTCCGCGAGGCGAGTGCGGCACAGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp CTCACCCCACCCAGCTCCAGGCCAGTGCGATGGGACTaGTTCGCTCCCTTGGATACCGTACCTCGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LTPPSSRPVRWD*FAPLDTVPRSP
Trigger: GGGGGACCGAGGTACGGTATCCAAGGGAGCGAATCAGTCCCATCGCACTGGCCTGGAGCTGGGTGGGGTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp GGTGGGCTAGGAGGCTGCGCTGGCGCTGGAGCTGGGTaGGGAGTCCCTGGGCCTCCACAGAGCCTTAGAAAT +
Preference number: 6 (lower is better)
Translates to: GGLGGCAGAGAG*GVPGPPQSLRN
Trigger: ATTTCTAAGGCTCTGTGGAGGCCCAGGGACTCCTCACCCAGCTCCAGCGCCAGCGCAGCCTCCTAGCCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp TTGGGTGGTGGTCACAGGTGCCAGTCTCCGGACGGATaGCGGCCTAGATTTCCTCCCGGACTCGGTGGCACC +
Preference number: 6 (lower is better)
Translates to: LGGGHRCQSPDG*RPRFPPGLGGT
Trigger: GGTGCCACCGAGTCCGGGAGGAAATCTAGGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp TCACCAGGGAGTCGAGGCAGTGGGCGAAACAAGGGATaGGGGAACAGCCCTCACCCTTGGCCGCCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPGSRGSGRNKG*GNSPHPWPPAP
Trigger: TGGAGCAGGCGGCCAAGGGTGAGGGCTGTTCCCCCATCCCTTGTTTCGCCCACTGCCTCGACTCCCTGGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp GCCTCGCGGACCACCATCTGGAAGGGCTACAGGAGCTaGCTGAGGCTGTCTGCCGGGCTCCAGAATGTGGCC +
Preference number: 6 (lower is better)
Translates to: ASRTTIWKGYRS*LRLSAGLQNVA
Trigger: GGCCACATTCTGGAGCCCGGCAGACAGCCTCAGCAAGCTCCTGTAGCCCTTCCAGATGGTGGTCCGCGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp CGCGGACCACCATCTGGAAGGGCTACAGGAGCTTGCTaGGGCTGTCTGCCGGGCTCCAGAATGTGGCCGACA +
Preference number: 6 (lower is better)
Translates to: RGPPSGRATGAC*GCLPGSRMWPT
Trigger: TGTCGGCCACATTCTGGAGCCCGGCAGACAGCCTCAGCAAGCTCCTGTAGCCCTTCCAGATGGTGGTCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp CCAACCTTGAATCCAAATGAATCTGCGGTGCCTGAGTaGGCAGGCGTGGGCAGCGAGGCGGTGCGGCCGGAA +
Preference number: 6 (lower is better)
Translates to: PTLNPNESAVPE*AGVGSEAVRPE
Trigger: TTCCGGCCGCACCGCCTCGCTGCCCACGCCTGCGCACTCAGGCACCGCAGATTCATTTGGATTCAAGGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp AGGGAGCCCCGTAAGAGAGGGCCTCTTCATGTGGTGTaGACAGCCAGCGTCCTGCCCTGCTGCAGCGCTGAT +
Preference number: 6 (lower is better)
Translates to: REPRKRGPLHVV*TASVLPCCSAD
Trigger: ATCAGCGCTGCAGCAGGGCAGGACGCTGGCTGTGCACACCACATGAAGAGGCCCTCTCTTACGGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS CCA 72 bp GTTCAAGGGAGCCCCGTAAGAGAGGGCCTCTTCATGTaGTGTGCACAGCCAGCGTCCTGCCCTGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: VQGSPVREGLFM*CAQPASCPAAA
Trigger: CGCTGCAGCAGGGCAGGACGCTGGCTGTGCACACCACATGAAGAGGCCCTCTCTTACGGGGCTCCCTTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS CAA 90 bp CAAGGCAACACCAGCCTTCCCCAGCTGGTGCCTGCCCTTGTACTCTaGAAGGGGCTGCTGCTGCTCCACCAGCCACTCCAGCAGGTGGTA +
Preference number: 6 (lower is better)
Translates to: QGNTSLPQLVPALVL*KGLLLLHQPLQQVV
Trigger: TACCACCTGCTGGAGTGGCTGGTGGAGCAGCAGCAGCCCCTTCAAGAGTACAAGGGCAGGCACCAGCTGGGGAAGGCTGGTGTTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp CCGACAAGGCAACACCAGCCTTCCCCAGCTGGTGCCTaGCCTTGTACTCTTGAAGGGGCTGCTGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PTRQHQPSPAGA*PCTLEGAAAAP
Trigger: TGGAGCAGCAGCAGCCCCTTCAAGAGTACAAGGGCAGGCACCAGCTGGGGAAGGCTGGTGTTGCCTTGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GAGGGCCTCTTCATGTGGTGTGCACAGCCAGCGTCCTaGCCTGCTGCAGCGCTGATTCAGCATCACGGTAAC +
Preference number: 6 (lower is better)
Translates to: EGLFMWCAQPAS*PAAALIQHHGN
Trigger: GTTACCGTGATGCTGAATCAGCGCTGCAGCAGGGCAGGACGCTGGCTGTGCACACCACATGAAGAGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS GCA 72 bp CATCTGGAAGGGCTACAGGAGCTTGCTGAGGCTGTCTaGCGGGCTCCAGAATGTGGCCGACAAGGCAACACC +
Preference number: 6 (lower is better)
Translates to: HLEGLQELAEAV*RAPECGRQGNT
Trigger: GGTGTTGCCTTGTCGGCCACATTCTGGAGCCCGGCAGACAGCCTCAGCAAGCTCCTGTAGCCCTTCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp GGACCTCCAAGCCCTTGTTCAATACATGTTGGGTGGTaGTCACAGGTGCCAGTCTCCGGACGGATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: GPPSPCSIHVGW*SQVPVSGRMAA
Trigger: GGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 90 bp TTCTCCCACAGATACTTCTTGACAATGATGCTGGCCCAGTGGCTCTaGGTGGACAGCGAGCCCCCGCTTCTCTCAGAGGCCAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: FSHRYFLTMMLAQWL*VDSEPPLLSEASSP
Trigger: GGGGCTGCTGGCCTCTGAGAGAAGCGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCATTGTCAAGAAGTATCTGTGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 90 bp GGGTCATCCTGGGCTCCAACGGTCTCATTCTCCCACAGATACTTCTaGACAATGATGCTGGCCCAGTGGCTCTTGGTGGACAGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GSSWAPTVSFSHRYF*TMMLAQWLLVDSEP
Trigger: GGGCTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCATTGTCAAGAAGTATCTGTGGGAGAATGAGACCGTTGGAGCCCAGGATGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp AGATACTTCTTGACAATGATGCTGGCCCAGTGGCTCTaGGTGGACAGCGAGCCCCCGCTTCTCTCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: RYFLTMMLAQWL*VDSEPPLLSEA
Trigger: GGCCTCTGAGAGAAGCGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCATTGTCAAGAAGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GCCCTTGTTCAATACATGTTGGGTGGTGGTCACAGGTaGCAGTCTCCGGACGGATGGCGGCCTAGATTTCCT +
Preference number: 6 (lower is better)
Translates to: ALVQYMLGGGHR*QSPDGWRPRFP
Trigger: AGGAAATCTAGGCCGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp ATCGGTCGGTTCAGGAAATCCACCCAGGGTGTCTCCTaGTGTTATCAGAAAGGGGTCCCGATCCAGGCCCTA +
Preference number: 6 (lower is better)
Translates to: IGRFRKSTQGVS*CYQKGVPIQAL
Trigger: TAGGGCCTGGATCGGGACCCCTTTCTGATAACACCAGGAGACACCCTGGGTGGATTTCCTGAACCGACCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp AAAGGACCTCCAAGCCCTTGTTCAATACATGTTGGGTaGTGGTCACAGGTGCCAGTCTCCGGACGGATGGCG +
Preference number: 6 (lower is better)
Translates to: KGPPSPCSIHVG*WSQVPVSGRMA
Trigger: CGCCATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp TCCCACAGATACTTCTTGACAATGATGCTGGCCCAGTaGCTCTTGGTGGACAGCGAGCCCCCGCTTCTCTCA +
Preference number: 6 (lower is better)
Translates to: SHRYFLTMMLAQ*LLVDSEPPLLS
Trigger: TGAGAGAAGCGGGGGCTCGCTGTCCACCAAGAGCCACTGGGCCAGCATCATTGTCAAGAAGTATCTGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp AGAAATGGCTGCAGGTGGCCCTGGCAGTGCCCAGGATaGTCTGGACACTGTGAGGGTGACACAGAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: RNGCRWPWQCPG*SGHCEGDTESF
Trigger: GAAACTTTCTGTGTCACCCTCACAGTGTCCAGATCATCCTGGGCACTGCCAGGGCCACCTGCAGCCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS TCA 72 bp GATGACAGTGCAGCTGGCACTGTTGAGAGCCAACCTTaGATCCAAATGAATCTGCGGTGCCTGAGTGCGCAG +
Preference number: 6 (lower is better)
Translates to: DDSAAGTVESQP*IQMNLRCLSAQ
Trigger: CTGCGCACTCAGGCACCGCAGATTCATTTGGATTCAAGGTTGGCTCTCAACAGTGCCAGCTGCACTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CCA 72 bp AGAGAAAGGACCTCCAAGCCCTTGTTCAATACATGTTaGGTGGTGGTCACAGGTGCCAGTCTCCGGACGGAT +
Preference number: 6 (lower is better)
Translates to: RERTSKPLFNTC*VVVTGASLRTD
Trigger: ATCCGTCCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp GAAAGGGGTCCCGATCCAGGCCCTAAGAGAGGGTTCTaGGATCTCATGCAAGAAAGAATTCAGGGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: ERGPDPGPKRGF*DLMQERIQGKP
Trigger: GGGCTTGCCCTGAATTCTTTCTTGCATGAGATCCAAGAACCCTCTCTTAGGGCCTGGATCGGGACCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp TATCGGTGCGGCCTTAGAGAAAGGACCTCCAAGCCCTaGTTCAATACATGTTGGGTGGTGGTCACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: YRCGLRERTSKP*FNTCWVVVTGA
Trigger: GGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCCTTTCTCTAAGGCCGCACCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp GGCAGCTGGGGGAAATCACTCAGGAGCCTACATGCTTaGTCTGAGGCACTACCCCTAGAATCTCCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: GSWGKSLRSLHA*SEALPLESPAF
Trigger: GAAAGCTGGAGATTCTAGGGGTAGTGCCTCAGACAAAGCATGTAGGCTCCTGAGTGATTTCCCCCAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 90 bp GTAATCGTTTATCGGTGCGGCCTTAGAGAAAGGACCTCCAAGCCCTaGTTCAATACATGTTGGGTGGTGGTCACAGGTGCCAGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: VIVYRCGLRERTSKP*FNTCWVVVTGASLR
Trigger: CCGGAGACTGGCACCTGTGACCACCACCCAACATGTATTGAACAAGGGCTTGGAGGTCCTTTCTCTAAGGCCGCACCGATAAACGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 90 bp TCACAATCTTCAACCCTCGCAGGCCCGTCAGGTAGATCTGGGATTTaGTGTCATCACTGGTACAACAGTGACACCACCATGTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SQSSTLAGPSGRSGI*CHHWYNSDTTMFSS
Trigger: GGAAGAGAACATGGTGGTGTCACTGTTGTACCAGTGATGACACAAAATCCCAGATCTACCTGACGGGCCTGCGAGGGTTGAAGATTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5
CDS CAA 90 bp CAAGAAGAGGAGATGCTCAATGGCTTCCACCTTGAGAGAAGAGTTTaGCTCTACAAGGGTGGGGCTGTTCAGGGAGGCAAAGATGCTTTC +
Preference number: 6 (lower is better)
Translates to: QEEEMLNGFHLERRV*LYKGGAVQGGKDAF
Trigger: GAAAGCATCTTTGCCTCCCTGAACAGCCCCACCCTTGTAGAGCAAAACTCTTCTCTCAAGGTGGAAGCCATTGAGCATCTCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS GCA 72 bp GTGCCCACAGCACTAGCTGTGTCACCGATACGTCCGTaGATCTTAGCTTTTATTCCCCTTAATGTTGTTTGT +
Preference number: 6 (lower is better)
Translates to: VPTALAVSPIRP*ILAFIPLNVVC
Trigger: ACAAACAACATTAAGGGGAATAAAAGCTAAGATGCACGGACGTATCGGTGACACAGCTAGTGCTGTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343855.6
CDS CAA 72 bp GAAGCAAGAACTAAAATTCTTAACGTTTCCAAATTCTaGGGTTCAAGGGAGCCCCGTAAGAGAGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: EARTKILNVSKF*GSREPRKRGPL
Trigger: AAGAGGCCCTCTCTTACGGGGCTCCCTTGAACCCAAGAATTTGGAAACGTTAAGAATTTTAGTTCTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343855.6
ENST00000463441.5