Pregenerated sensors for ZAR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182223Ensembl transcript IDs: ENST00000327939.4
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCATGCGCGGGAAGCGCATaGGCCGCGGGGCGCCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGEARKSSLVYSISACTACAGSA*AAGRRS Trigger: AGAACGGCGCCCCGCGGCCCATGCGCTTCCCGCGCA...TGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACAGTACCGCGGCGTCGATaGGCGGGCTCACCTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: GEARKSSLVYSISACTATVPRRR*AGSPAP Trigger: CGGTGCAGGTGAGCCCGCGCATCGACGCCGCGGTAC...TGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAAGGACCGTCGGCCGGCTaGTCCCAGCTCGCTCGGACT | + |
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Preference number: 4 (lower is better) Translates to: EERHGKAHSSTPSAHAQQGPSAG*SQLART Trigger: AGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCC...TTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGAGCGCAGCCGCTCCTTaGCCAGCTCCGGGCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: EARKSSLVYSISACTATLSAAAP*PAPGSV Trigger: CACGGAGCCCGGAGCTGGGCAAGGAGCGGCTGCGCT...CAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACAAGACCCGGCCCCACCTaGGCCAGGAGAGCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: GEARKSSLVYSISACTATRPGPT*ARRAMS Trigger: GCTCATGGCTCTCCTGGCGCAGGTGGGGCCGGGTCT...TGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GGAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCATTCTGGGGGCTGCCCTaGTCCAGGCCTCGACGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGEARKSSLVYSISACTAFWGLP*SRPRRD Trigger: ATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAA...TGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGGGTGGCCGCGGGGTATaGGTACCGGTACGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EARKSSLVYSISACTATLGGRGV*VPVRAG Trigger: CCCTGCTCGTACCGGTACCCATACCCCGCGGCCACC...CAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCACGACGGGATGGCTGCTaGGAGAAAGAGCCGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: GGEARKSSLVYSISACTARRDGC*EKEPPP Trigger: GGGTGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCG...TGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR TCA 90 bp | ACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACTTTGCGCCAGGAGAGCCATaGGCCGCTCCCGCTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TEKLTRLLHQRMHSNTDFAPGEP*AAPAGS Trigger: GCTACCAGCGGGAGCGGCTCATGGCTCTCCTGGCGC...AAAGTCAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACCTCGACGGGATGGCTaGTGGGAGAAAGAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: EERHGKAHSSTPSAHAQQPRRDG*WEKEPP Trigger: TGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGG...TTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACTTTCGCCGTTCTGGGGGCTaGCCTGCTCCAGGCCTCGAC | + |
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Preference number: 4 (lower is better) Translates to: TEKLTRLLHQRMHSNTDFRRSGG*PAPGLD Trigger: GTCGAGGCCTGGAGCAGGGCAGCCCCCAGAACGGCG...AAAGTCAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | ACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACTTTCCGCGCCCTTGCCCTTaGTGGCCGCGGGGTATGGGT | + |
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Preference number: 4 (lower is better) Translates to: TEKLTRLLHQRMHSNTDFPRPCP*WPRGMG Trigger: ACCCATACCCCGCGGCCACCAAGGGCAAGGGCGCGG...AAAGTCAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACAGGCCTCGACGGGATaGCTGCTGGGAGAAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EERHGKAHSSTPSAHAQQQASTG*LLGERA Trigger: GGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTG...TTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR TCA 90 bp | GAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGCTACCGCACAAATCTTaGCGGTGGGGCCGTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: EARKSSLVYSISACTATLLPHKS*RWGRLG Trigger: CCCTAAACGGCCCCACCGTCAAGATTTGTGCGGTAG...CAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGCACAGGACAGGCGTTTaGCTTTGCATCTACCGCACA | + |
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Preference number: 4 (lower is better) Translates to: EARKSSLVYSISACTATLHRTGV*LCIYRT Trigger: TGTGCGGTAGATGCAAAGGCAAACGCCTGTCCTGTG...CAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACATTCTGCTCTAAGAACTaGAAGCGCAGCCGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GEARKSSLVYSISACTATFCSKN*KRSRSL Trigger: CAAGGAGCGGCTGCGCTTCCAGTTCTTAGAGCAGAA...TGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACATCTCCCAGCGGATGTTaGAGTCCTTGCAGTGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GEARKSSLVYSISACTATSPSGC*SPCSGN Trigger: ATTACCACTGCAAGGACTGCAACATCCGCTGGGAGA...TGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR TCA 90 bp | GGAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCATACAACTTTGACAGGTaGTATCCTCCACTCGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GGEARKSSLVYSISACTAYNFDR*YPPLGK Trigger: CTTACCGAGTGGAGGATATCACCTGTCAAAGTTGTA...TGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAACCCGCCGACGGAGGTTaGCCCGGGCTCCTTAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHEPADGG*PGLLSA Trigger: GGCGCTAAGGAGCCCGGGGCAACCTCCGTCGGCGGG...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACAGGCGTTTGCCTTTaGATCTACCGCACAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: EARKSSLVYSISACTATLTGVCL*IYRTNL Trigger: AAGATTTGTGCGGTAGATGCAAAGGCAAACGCCTGT...CAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR TCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAACCTCCAGGAAGGCGGTaGGACGGCGCAAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHEPPGRR*DGARPG Trigger: CCCTGGCCTTGCGCCGTCTCACCGCCTTCCTGGAGG...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAAATGCGCGGGCTCACCTaGACCGCCACGTCGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHEMRGLT*TATSQL Trigger: CAGCTGCGACGTGGCGGTGCAGGTGAGCCCGCGCAT...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAAAGTACACGGCGACGGTaGGCGGGAAGCGCATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHESTRRR*AGSAWA Trigger: GGCCCATGCGCTTCCCGCGCACCGTCGCCGTGTACT...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAACGCCCTTGCCCTTGGTaGCCGCGGGGTATGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHERPCPW*PRGMGT Trigger: GGTACCCATACCCCGCGGCCACCAAGGGCAAGGGCG...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | ACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACTTTGTGGCGAAGTTTTACTaGGCAGGAACATCTCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TEKLTRLLHQRMHSNTDFVAKFY*AGTSRL Trigger: CAAACGAGATGTTCCTGCCCAGTAAAACTTCGCCAC...AAAGTCAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAACGTTTAGGGTCCACGTaGCGAAGTTTTACTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHERLGST*RSFTGQ Trigger: CTGCCCAGTAAAACTTCGCCACGTGGACCCTAAACG...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR GCA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAAGGATGTTGCAGTCCTTaGAGTGGTAATAGCCATATT | + |
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Preference number: 4 (lower is better) Translates to: VLQYLYLKAFSEYTAFHEGCCSP*SGNSHI Trigger: AATATGGCTATTACCACTGCAAGGACTGCAACATCC...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | CGATGCGCGGGCTCACCTGCACCGCCACGTCGCAGCTGCCGGCCCTaGGGGCGCGCGGCCCGAGACCCGGCCCCACCTGCGCCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RCAGSPAPPRRSCRP*GRAARDPAPPAPGE Trigger: CTCTCCTGGCGCAGGTGGGGCCGGGTCTCGGGCCGCGCGCCCGCAGGGCCGGCAGCTGCGACGTGGCGGTGCAGGTGAGCCCGCGCATCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | CGGCAGCTCGGGACCGTCGGCCGGCTGCTCCCAGCTCGCTCGGACTaGGGCCTGGGCCTCGCCGTCGTCGTCGGACTGCGGCCGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RQLGTVGRLLPARSD*GLGLAVVVGLRPPG Trigger: CCCCGGCGGCCGCAGTCCGACGACGACGGCGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCCGAGCTGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | TCCCGTCCGTCGCCGCCGTCTCGGGCCCTCCCCGCCGACGGAGGTTaGCCCGGGCTCCTTAGCGCCGACCGCGGAGCCGCCTCGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRPSPPSRALPADGG*PGLLSADRGAASPS Trigger: GGAGGGCGAGGCGGCTCCGCGGTCGGCGCTAAGGAGCCCGGGGCAACCTCCGTCGGCGGGGAGGGCCCGAGACGGCGGCGACGGACGGGA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 90 bp | TGCCCCGGGCTCCTTAGCGCCGACCGCGGAGCCGCCTCGCCCTCCTaGGCCTCTCGCGGCGGCAGCTCGGGACCGTCGGCCGGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CPGLLSADRGAASPS*ASRGGSSGPSAGCS Trigger: GGAGCAGCCGGCCGACGGTCCCGAGCTGCCGCCGCGAGAGGCCCAGGAGGGCGAGGCGGCTCCGCGGTCGGCGCTAAGGAGCCCGGGGCA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | CCCTCCTGGGCCTCTCGCGGCGGCAGCTCGGGACCGTCGGCCGGCTaGTCCCAGCTCGCTCGGACTGCGGCCTGGGCCTCGCCGTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: PSWASRGGSSGPSAG*SQLARTAAWASPSS Trigger: CGACGACGGCGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCCGAGCTGCCGCCGCGAGAGGCCCAGGAGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 90 bp | TCGGGACCGTCGGCCGGCTGCTCCCAGCTCGCTCGGACTGCGGCCTaGGCCTCGCCGTCGTCGTCGGACTGCGGCCGCCGGGGCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SGPSAGCSQLARTAA*ASPSSSDCGRRGAF Trigger: GAAGGCGCCCCGGCGGCCGCAGTCCGACGACGACGGCGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | GCGCCGTTCTGGGGGCTGCCCTGCTCCAGGCCTCGACGGGATGGCTaGTGGGAGAAAGAGCCGCCACCCGTGGTGCCCTCGGCCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: APFWGLPCSRPRRDG*WEKEPPPVVPSAPG Trigger: CCCCGGGGCCGAGGGCACCACGGGTGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAACGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 90 bp | CGGGGCGCCGTTCTGGGGGCTGCCCTGCTCCAGGCCTCGACGGGATaGCTGCTGGGAGAAAGAGCCGCCACCCGTGGTGCCCTCGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RGAVLGAALLQASTG*LLGERAATRGALGP Trigger: GGGGCCGAGGGCACCACGGGTGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAACGGCGCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS TCA 90 bp | GGGCGCGCGGCCCGAGACCCGGCCCCACCTGCGCCAGGAGAGCCATaGGCCGCTCCCGCTGGTAGCTGTCGAAGTACTCGGCGGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: GRAARDPAPPAPGEP*AAPAGSCRSTRRPS Trigger: TGACGGCCGCCGAGTACTTCGACAGCTACCAGCGGGAGCGGCTCATGGCTCTCCTGGCGCAGGTGGGGCCGGGTCTCGGGCCGCGCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 90 bp | CGCGGGAAGCGCATGGGCCGCGGGGCGCCGTTCTGGGGGCTGCCCTaGTCCAGGCCTCGACGGGATGGCTGCTGGGAGAAAGAGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: RGKRMGRGAPFWGLP*SRPRRDGCWEKEPP Trigger: TGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAACGGCGCCCCGCGGCCCATGCGCTTCCCGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CAA 90 bp | GTGTTGCAATACCTTTATTTGAAGGCTTTTTCAGAATACACTGCCTTTCATGAAGCCGCGCCCTTGCCCTaGGTGGCCGCGGGGTATGGG | + |
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Preference number: 5 (lower is better) Translates to: VLQYLYLKAFSEYTAFHEAAPLP*VAAGYG Trigger: CCCATACCCCGCGGCCACCAAGGGCAAGGGCGCGGC...TTCATGAAAGGCAGTGTATTCTGAAAAAGCCTTCAAATAAAGGTATTGCAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CAA 90 bp | GGAGGAGAGGCACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCACGTTTGTTTACAACTTaGACAGGTGATATCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GGEARKSSLVYSISACTARLFTT*TGDILH Trigger: GTGGAGGATATCACCTGTCAAAGTTGTAAACAAACG...TGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGTGCCTCTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS-3UTR CAA 90 bp | ACGGAAAAGCTCACTCGTCTACTCCATCAGCGCATGCACAGCAACACTGACTTTGACAGGCGTTTGCCTTaGCATCTACCGCACAAATCT | + |
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Preference number: 5 (lower is better) Translates to: TEKLTRLLHQRMHSNTDFDRRLP*HLPHKS Trigger: AGATTTGTGCGGTAGATGCAAAGGCAAACGCCTGTC...AAAGTCAGTGTTGCTGTGCATGCGCTGATGGAGTAGACGAGTGAGCTTTTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 72 bp | GCCTCTCGCGGCGGCAGCTCGGGACCGTCGGCCGGCTaGTCCCAGCTCGCTCGGACTGCGGCCTGGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ASRGGSSGPSAG*SQLARTAAWAS Trigger: CGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCCGAGCTGCCGCCGCGAGAGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 72 bp | TCGGCCGGCTGCTCCCAGCTCGCTCGGACTGCGGCCTaGGCCTCGCCGTCGTCGTCGGACTGCGGCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SAGCSQLARTAA*ASPSSSDCGRR Trigger: CCGGCGGCCGCAGTCCGACGACGACGGCGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 72 bp | CTCCTTAGCGCCGACCGCGGAGCCGCCTCGCCCTCCTaGGCCTCTCGCGGCGGCAGCTCGGGACCGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LLSADRGAASPS*ASRGGSSGPSA Trigger: GGCCGACGGTCCCGAGCTGCCGCCGCGAGAGGCCCAGGAGGGCGAGGCGGCTCCGCGGTCGGCGCTAAGGAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 72 bp | GGGACCGTCGGCCGGCTGCTCCCAGCTCGCTCGGACTaGGGCCTGGGCCTCGCCGTCGTCGTCGGACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: GTVGRLLPARSD*GLGLAVVVGLR Trigger: CCGCAGTCCGACGACGACGGCGAGGCCCAGGCCGCAGTCCGAGCGAGCTGGGAGCAGCCGGCCGACGGTCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 72 bp | GAGCACTGTACCGCGGCGTCGATGCGCGGGCTCACCTaGACCGCCACGTCGCAGCTGCCGGCCCTGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: EHCTAASMRGLT*TATSQLPALRA Trigger: CGCCCGCAGGGCCGGCAGCTGCGACGTGGCGGTGCAGGTGAGCCCGCGCATCGACGCCGCGGTACAGTGCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS GCA 72 bp | GGAAGCGCATGGGCCGCGGGGCGCCGTTCTGGGGGCTaGCCTGCTCCAGGCCTCGACGGGATGGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GSAWAAGRRSGG*PAPGLDGMAAG Trigger: CCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAACGGCGCCCCGCGGCCCATGCGCTTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CAA 72 bp | CGCTGCTGCCAGCTGCCGCCCGCCGCGCCCTTGCCCTaGGTGGCCGCGGGGTATGGGTACCGGTACGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RCCQLPPAAPLP*VAAGYGYRYEQ Trigger: CTGCTCGTACCGGTACCCATACCCCGCGGCCACCAAGGGCAAGGGCGCGGCGGGCGGCAGCTGGCAGCAGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 72 bp | CGTAACCGTCCAGCACCTCGTCCCCCAGGGCCGCCATaGGCGCACTGCTCCCGCCCGCCGCCGCACCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: RNRPAPRPPGPP*AHCSRPPPHPK Trigger: TTTAGGGTGCGGCGGCGGGCGGGAGCAGTGCGCCCATGGCGGCCCTGGGGGACGAGGTGCTGGACGGTTACG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 72 bp | GGGCTGCCCTGCTCCAGGCCTCGACGGGATGGCTGCTaGGAGAAAGAGCCGCCACCCGTGGTGCCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLPCSRPRRDGC*EKEPPPVVPSA Trigger: GGCCGAGGGCACCACGGGTGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS TCA 72 bp | GCCCGAGACCCGGCCCCACCTGCGCCAGGAGAGCCATaGGCCGCTCCCGCTGGTAGCTGTCGAAGTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: ARDPAPPAPGEP*AAPAGSCRSTR Trigger: CCGAGTACTTCGACAGCTACCAGCGGGAGCGGCTCATGGCTCTCCTGGCGCAGGTGGGGCCGGGTCTCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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| CDS CCA 72 bp | GTTCTGGGGGCTGCCCTGCTCCAGGCCTCGACGGGATaGCTGCTGGGAGAAAGAGCCGCCACCCGTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VLGAALLQASTG*LLGERAATRGA Trigger: GGCACCACGGGTGGCGGCTCTTTCTCCCAGCAGCCATCCCGTCGAGGCCTGGAGCAGGGCAGCCCCCAGAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327939.4 |
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