RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZAN (Homo sapiens)

Ensembl gene IDs: ENSG00000146839

Ensembl transcript IDs: ENST00000538115.5, ENST00000542585.5, ENST00000546213.5, ENST00000546292.2, ENST00000613979.5, ENST00000618565.4, ENST00000620596.4, ENST00000620868.4

Found 1147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTaGAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGG +
Preference number: 1 (lower is better)
Translates to: APYTGLPRNQLHTRR*RWLPAPDTARHSDR
Trigger: CCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR CCA 90 bp CCTGCGTTTTCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTaGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: PAFSLSSSSFCKCTL*SRPVVRPPQAPAVP
Trigger: TGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGAAAACGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGCCCCCGCTCTGCAGCTaGAGGGCTCACACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRPPLCS*RAHTAG
Trigger: TCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGG...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCCCCCGCTCTGCAGCTaGAGGGCTCACACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGPPLCS*RAHTAG
Trigger: TCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGTGAAGGTGGCTCCCTaGTCCCGACACTGCCCGTCA +
Preference number: 2 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPVKVAP*SRHCPS
Trigger: TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCAC...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 2 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGATGTGGTTCCCCAGGGTaGAGACCTCCCCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGCGSPG*RPPPLC
Trigger: GCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACA...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGCAGGATCCGTGAGCTaGCACAGGTGCACCGCTGAG +
Preference number: 2 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRAGSVS*HRCTAE
Trigger: CTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 2 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCACCAGGTTAGATGCTaGCTTTCTGGGAGGTGGCGC +
Preference number: 2 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRHQVRC*LSGRWR
Trigger: GCGCCACCTCCCAGAAAGCCAGCATCTAACCTGGTG...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACC +
Preference number: 2 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVKQPWV*FPRVQT
Trigger: GGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTT...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 2 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGTGAAGGTGGCTCCCTaGTCCCGACACTGCCCGTCA +
Preference number: 2 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGVKVAP*SRHCPS
Trigger: TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCAC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGTGAGCTGGCACAGGTaGACCGCTGAGAGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSVSWHR*TAESSP
Trigger: AGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCAC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGCAGGATCCGTGAGCTaGCACAGGTGCACCGCTGAG +
Preference number: 2 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAAGSVS*HRCTAE
Trigger: CTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACC +
Preference number: 2 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSKQPWV*FPRVQT
Trigger: GGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTT...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTTGGCTTTCTGGGAGGTaGCGCATCTCGAGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPWLSGR*RISRLH
Trigger: ATGGAGCCTCGAGATGCGCCACCTCCCAGAAAGCCA...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACAC +
Preference number: 2 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPHCPSF*QGFCRH
Trigger: GTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTG...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCTGTGGTTCCCCAGGGTaGAGACCTCCCCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVCGSPG*RPPPLC
Trigger: GCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACA...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCCACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACAC +
Preference number: 2 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAHCPSF*QGFCRH
Trigger: GTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTG...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR GCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGCCCACCAGGTTAGATaGTGGCTTTCTGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAAHQVR*WLSGRW
Trigger: CCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACGCAGGATCCGTGAGCTaGCACAGGTGCACCGCTGAG +
Preference number: 2 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNAGSVS*HRCTAE
Trigger: CTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGC...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCATGTAAATGCACTCTCTaGTCACGGCCAGTAGTACGA +
Preference number: 2 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPCKCTL*SRPVVR
Trigger: TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACA...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCAGACACGGGCTTTCTaGAAAGCAGCCTTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNQTRAF*KAALGV
Trigger: CACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR TCA 72 bp CGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCGCTGAGAGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: RSAAEGLTQQDP*AGTGAPLRAVL
Trigger: GAGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000546213.5
3UTR CCA 72 bp TGCAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: CRHGLSGKQPWV*FPRVQTSPALQ
Trigger: CTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR CCA 72 bp GACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTaGCGCATCTCGAGGCTCCATACACAGGCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: DAHQVRCWLSGR*RISRLHTQASP
Trigger: GGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR TCA 72 bp ACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTaGAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAT +
Preference number: 3 (lower is better)
Translates to: TGLPRNQLHTRR*RWLPAPDTARH
Trigger: ATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR TCA 72 bp AAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACACGGGCTTTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: KVAPCSRHCPSF*QGFCRHGLSGK
Trigger: CTTTCCAGAAAGCCCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CAA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCTTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CAA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR-3UTR CAA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGATTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
3UTR CCA 72 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTaGTCACGGCCAGTAGTACGACCACCACAGGCACCA +
Preference number: 3 (lower is better)
Translates to: SLSSSSFCKCTL*SRPVVRPPQAP
Trigger: TGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGGCCCTGGGGGTCTaGCAGCACCCTACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKGALGV*QHPTGL
Trigger: CAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCC...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCCATGGCGCAGAGGGTaGGGTCCCGCCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQPWRRG*GPASQP
Trigger: TGGCTGGCTGGCGGGACCGCACCCTCTGCGCCATGG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGCCCCGGTGGAGCCGGTaGGAGAGGGCCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPPRWSR*ERAHWL
Trigger: GAGCCAGTGGGCCCTCTCCCACCGGCTCCACCGGGG...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACCAGCCCAGTGGCTGTaGGGCTGGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTPAQWL*GWDGVA
Trigger: GGCCACCCCATCCCAGCCCCACAGCCACTGGGCTGG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACGCCAGGCAGGGGCCTaGCCAGCCTGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPRQAGA*PAWAHR
Trigger: CCTGTGTGCCCAGGCTGGCCAGGCCCCTGCCTGGCG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGCCGGCTCACCAGTCTaGCTGACTGGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKAGSPV*LTGLPG
Trigger: CCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGC...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACCACCAGGAAGGGCGTaGGGTCTATGCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTPPGRA*GLCGRR
Trigger: GCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGGGTCACCCGAGGCTGTaGAGGTGGCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPGHPRL*RWRHLG
Trigger: CCCAAGGTGCCGCCACCTGCACAGCCTCGGGTGACC...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCACTTTTCCCGCGCCCTaGGGAGGTCGGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRTFPAP*GGRPPC
Trigger: GCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGT...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCGGTGGAGCCGGTaGGAGAGGGCCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTPRWSR*ERAHWL
Trigger: GAGCCAGTGGGCCCTCTCCCACCGGCTCCACCGGGG...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCCCGGTGGAGCCGGTaGGAGAGGGCCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPPRWSR*ERAHWL
Trigger: GAGCCAGTGGGCCCTCTCCCACCGGCTCCACCGGGG...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCAGGGCTTCACAGCGTaGCCTGCGTCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGQGFTA*PASWQV
Trigger: CACCTGCCAGGACGCAGGCCACGCTGTGAAGCCCTG...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGGGCTGTTGGTGTCCTaGGGGGACGGTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSGLLVS*GDGDGG
Trigger: ACCTCCGTCACCGTCCCCTCAGGACACCAACAGCCC...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGCGGAAGTCCCCGCACTaGATGGCTCCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKRKSPH*MAPPVQ
Trigger: CTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCG...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGGGCAGGGTGAACCCTaGGGGCACAGTGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRGQGEP*GHSDGG
Trigger: ACCACCGTCACTGTGCCCGCAGGGTTCACCCTGCCC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGCGGCCCCCAGCTaGATGGAATCGCCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTQAAPS*MESPAS
Trigger: GCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCACTTTTCCCGCGCCCTaGGGAGGTCGGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGTFPAP*GGRPPC
Trigger: GCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGT...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGAGGAGCCCGGAGCGCTaGCTCGCACTTTTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIRERSPER*LALFPR
Trigger: GCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCT...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTACACTTGGAGGCCCGTaGGGAGGCCCAGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGTLGGP*GGPAPP
Trigger: GGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGT...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGCCCAGCGCAGAGGGTaGGGTCCCGCCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADAQRRG*GPASQP
Trigger: TGGCTGGCTGGCGGGACCGCACCCTCTGCGCTGGGC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538115.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGAGCAGCAGCCTGAGCTaGGCGCCCCAAGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRSSSLS*APQDSP
Trigger: CGGGCTGTCTTGGGGCGCCCAGCTCAGGCTGCTGCT...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGCAGGGCTTCACAGCGTaGCCTGCGTCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPQGFTA*PASWQV
Trigger: CACCTGCCAGGACGCAGGCCACGCTGTGAAGCCCTG...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGCGGCACAGGGCTGTaGTGTCGCCCTTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLSGTGL*CRPWSH
Trigger: GTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCT...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCGCCAGGCAGGGGCCTaGCCAGCCTGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLRQAGA*PAWAHR
Trigger: CCTGTGTGCCCAGGCTGGCCAGGCCCCTGCCTGGCG...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTATGCGGGAGGCGCACTaGGCCCACACAGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGMREAH*AHTGAR
Trigger: CCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCAT...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGGCAGCAAAGGGGCCCTaGGGGTCTGCCAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPAAKGP*GSASTL
Trigger: TAGGGTGCTGGCAGACCCCCAGGGCCCCTTTGCTGC...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGTCCTGAGGGGACGGTaGCGGAGGTGTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRVLRGR*RRCSAS
Trigger: ACTGGCAGAACACCTCCGTCACCGTCCCCTCAGGAC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGTGCACTCGAGGCCACTaGGGACGAAGCCCGGATTGC +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKCTRGH*GRSPDC
Trigger: GCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCA...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGTGCTGTTGTCGGAAGTaGGCTGGCAGTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGCCCRK*AGSGTQ
Trigger: CTGGGTCCCACTGCCAGCTCACTTCCGACAACAGCA...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCGGGGCCACCGTCTGGTaGCAGGCAGCAAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGGATVW*QAAKGP
Trigger: GGGCCCCTTTGCTGCCTGTCACCAGACGGTGGCCCC...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGCCCCCGCTCTGCAGCTaGAGGGCTCACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQPPLCS*RAHTAG
Trigger: TCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGG...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACTTCACACTCGCAGGTaGAGGTGGCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTLHTRR*RWLPAP
Trigger: GGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGCTGCTGCCCAGCCACTaGGGACCTGGCAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQLLPSH*GPGNAA
Trigger: AGCTGCGTTGCCAGGTCCTCAGTGGCTGGGCAGCAG...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546213.5
CDS-3UTR GCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCAGGCGGCCCCCAGCTaGATGGAATCGCCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPQAAPS*MESPAS
Trigger: GCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTG...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGACACGGTGGCCCTTCTaGAGGGTGACCTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPTRWPF*RVTWAS
Trigger: CGATGCCCAGGTCACCCTGCAGAAGGGCCACCGTGT...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGGAAGCGCAGGAGTaGGTCCTCGGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKGEAQE*VLGLHL
Trigger: GAGGTGAAGACCGAGGACGCACTCCTGCGCTTCCCC...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTACACTTGGAGGCCCGTaGGGAGGCCCAGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDATLGGP*GGPAPP
Trigger: GGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGT...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACACTTGGAGGCCCGTaGGGAGGCCCAGCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRTLGGP*GGPAPP
Trigger: GGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGTGAAGGTGGCTCCCTaGTCCCGACACTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSVKVAP*SRHCPS
Trigger: TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCAC...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACCCAGCCCAGTGGCTGTaGGGCTGGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHPAQWL*GWDGVA
Trigger: GGCCACCCCATCCCAGCCCCACAGCCACTGGGCTGG...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCAGGGCTTCACAGCGTaGCCTGCGTCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAQGFTA*PASWQV
Trigger: CACCTGCCAGGACGCAGGCCACGCTGTGAAGCCCTG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGGGAGTACTTGCTGTTaGGCGGGCAGGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRGSTCC*AGRPLG
Trigger: GCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCCAGGCAGGGGCCTaGCCAGCCTGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTRQAGA*PAWAHR
Trigger: CCTGTGTGCCCAGGCTGGCCAGGCCCCTGCCTGGCG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCCTGAGGCCCGACAATaGAGCAGCCCATCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREPEARQ*SSPSRA
Trigger: GGCCCTGGATGGGCTGCTCCATTGTCGGGCCTCAGG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCTGACCCCAGGGATCTaGGAGATGGCGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAALTPGI*EMAGRV
Trigger: CACCCTCCCCGCCATCTCCCAGATCCCTGGGGTCAG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCCTGACCCCAGGGATCTaGGAGATGGCGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRLTPGI*EMAGRV
Trigger: CACCCTCCCCGCCATCTCCCAGATCCCTGGGGTCAG...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCATGCGGGAGGCGCACTaGGCCCACACAGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGMREAH*AHTGAR
Trigger: CCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCAT...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCCTGGCTCTGGCAGGTaGCCCCGAAGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREPGSGR*PRRLAE
Trigger: CTCTGCAAGCCTTCGGGGCCACCTGCCAGAGCCAGG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAAGCACCCTACAGGCCTaGGTGCTGTTGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSSTLQA*VLLLAS
Trigger: GCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCT...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGAGCACCCTACAGGCCTaGGTGCTGTTGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKSTLQA*VLLLAS
Trigger: GCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCT...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAGCCGGCTCACCAGTCTaGCTGACTGGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTAGSPV*LTGLPG
Trigger: CCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGC...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGACCACCTGGTACTTCTaGCACTCCTGGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGTTWYF*HSWSSS
Trigger: GGACGAGGACCAGGAGTGTCAGAAGTACCAGGTGGT...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTTGCACTCGAGGCCACTaGGGACGAAGCCCGGATTGC +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAACTRGH*GRSPDC
Trigger: GCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCA...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACCGCTCCCCTACCTTaGAGTAGCTGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLTAPLP*SSCLQG
Trigger: ACCCTGCAGGCAGCTACTTCAAGGTAGGGGAGCGGT...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCCCTTGGTCCCACACTaGCCATGCACGCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQPLVPH*PCTQLA
Trigger: TGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCCCCTTGGTCCCACACTaGCCATGCACGCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLPLVPH*PCTQLA
Trigger: TGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGG...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGACTCCCCTGGGAGCTaGCACACTCCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPDSPGS*HTPTPE
Trigger: CTCAGGTGTGGGAGTGTGTCAGCTCCCAGGGGAGTC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGTGCTGTTGTCGGAAGTaGGCTGGCAGTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKCCCRK*AGSGTQ
Trigger: CTGGGTCCCACTGCCAGCTCACTTCCGACAACAGCA...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGGGGCCACCGTCTGGTaGCAGGCAGCAAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTGATVW*QAAKGP
Trigger: GGGCCCCTTTGCTGCCTGTCACCAGACGGTGGCCCC...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACAGCACAGGTGCACCGCTaGGAGCAGTCCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTAQVHR*EQSSVR
Trigger: TCTGACTGAGGACTGCTCTCAGCGGTGCACCTGTGC...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGATAAATGTGGAGGGCTaGACCAGGAGACTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGINVEG*TRRLAP
Trigger: CGGGGCCAGTCTCCTGGTGCAGCCCTCCACATTTAT...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGCTCCCGCAGGGCCCATaGCATGGACGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKLPQGP*HGRVHF
Trigger: AAAATGGACCCGTCCATGGCATGGGCCCTGCGGGAG...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAAGACATCACCAAGGCTaGCAGCCCAGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSRHHQG*QPSGCG
Trigger: CCCACAGCCACTGGGCTGGCAGCCTTGGTGATGTCT...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCGGCACTCGACCCGACTaGCGGGCCAGCAGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRGTRPD*RASSGN
Trigger: ATTGCCGCTGCTGGCCCGGCAGTCGGGTCGAGTGCC...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACGGCACTCGACCCGACTaGCGGGCCAGCAGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHGTRPD*RASSGN
Trigger: ATTGCCGCTGCTGGCCCGGCAGTCGGGTCGAGTGCC...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGTCGTCCTGGTCCGTCTaGCAGCTGTTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRSSWSV*QLFPSS
Trigger: GGAGCTGGGGAACAGCTGGCAGACGGACCAGGACGA...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGGACGAAGCCCGGATTaGATTCACAGGCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRGRSPD*IHRPPR
Trigger: GCGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGGCAGCTGGAGGGCTTaGCACCCACAAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQGSWRA*HPQGNS
Trigger: GCTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGTCCAGGCGTCTGCCATaGTGTTCTCCTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKSRRLP*CSPGSW
Trigger: CCAGCTGCCAGGAGAACAGCATGGCAGACGCCTGGA...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTCCAGGCGTCTGCCATaGTGTTCTCCTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPSRRLP*CSPGSW
Trigger: CCAGCTGCCAGGAGAACAGCATGGCAGACGCCTGGA...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCCCTCGGGTTGTTTATaGTGCTGCAGGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGPSGCL*CCRCLG
Trigger: GCCCAGACACCTGCAGCAGCATAAACAACCCGAGGG...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGTGTGGACGGAGCAGGTaGAGAGCCTGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKCGRSR*RAWCRC
Trigger: ACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACA...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGTGTGGACGGAGCAGGTaGAGAGCCTGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQCGRSR*RAWCRC
Trigger: ACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACA...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTACACGGTGGCCCTTCTaGAGGGTGACCTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAATRWPF*RVTWAS
Trigger: CGATGCCCAGGTCACCCTGCAGAAGGGCCACCGTGT...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGGGGAAGCGCAGGAGTaGGTCCTCGGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAGEAQE*VLGLHL
Trigger: GAGGTGAAGACCGAGGACGCACTCCTGCGCTTCCCC...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGGGGGAAGCGCAGGAGTaGGTCCTCGGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQGEAQE*VLGLHL
Trigger: GAGGTGAAGACCGAGGACGCACTCCTGCGCTTCCCC...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTGGGGCCCTGGGGGTCTaGCAGCACCCTACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTGALGV*QHPTGL
Trigger: CAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCC...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCTGTGGTTCCCCAGGGTaGAGACCTCCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPCGSPG*RPPPLC
Trigger: GCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACA...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGAGGCATAGCCTGGGATaGTGGCGCAGCCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQRHSLG*WRSLPR
Trigger: GCGTGGAAGGCTGCGCCAGCATCCCAGGCTATGCCT...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGGGGCTGGGATGGGGTaGCCTCAGGGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTGAGMG*PQGCEL
Trigger: AAGCTCACAGCCCTGAGGCCACCCCATCCCAGCCCC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGGGGGCTGGGATGGGGTaGCCTCAGGGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLGAGMG*PQGCEL
Trigger: AAGCTCACAGCCCTGAGGCCACCCCATCCCAGCCCC...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCCGTAGACCAAGCAGGTaGCAGTGCCTGCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLRRPSR*QCLRRG
Trigger: ACCCCTACGCAGGCACTGCCACCTGCTTGGTCTACG...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGCCATTGGGCAGAAGTaGGGTTCCCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHAIGQK*GSLQGF
Trigger: GAAGCCCTGGAGGGAACCCCACTTCTGCCCAATGGC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGAGCTGTCTTGGGACCTaGACCAGCAAGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKSCLGT*TSKAGS
Trigger: TGACCCGGCCTTGCTGGTCCAGGTCCCAAGACAGCT...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTAGCGGCACAGGGCTGTaGTGTCGCCCTTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGSGTGL*CRPWSH
Trigger: GTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCT...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCGTGGTAGGAGCCCGCTaGGTCAGTGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPVVGAR*VSAATL
Trigger: CAGTGTGGCTGCACTGACCCAGCGGGCTCCTACCAC...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTTCCCTCCTCCTCCGCTaGTATAGCCCTGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAASLLLR*YSPGEA
Trigger: CGCTTCCCCAGGGCTATACCAGCGGAGGAGGAGGGA...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGTCCCTCCTCCTCCGCTaGTATAGCCCTGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIRESLLLR*YSPGEA
Trigger: CGCTTCCCCAGGGCTATACCAGCGGAGGAGGAGGGA...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGCTACATTCGGACACTTaGAGGCCCGTGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRLHSDT*RPVRRP
Trigger: GGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAG...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGCAGCAAAGGGGCCCTaGGGGTCTGCCAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTAAKGP*GSASTL
Trigger: TAGGGTGCTGGCAGACCCCCAGGGCCCCTTTGCTGC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCGAGGCTTCTCTTTCCTaGAAAGGGCAGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLEASLS*KGQPPP
Trigger: TGGTGGGGGCTGCCCTTTTCAGGAAAGAGAAGCCTC...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCGATGACCCTTTCTTCTaGGTCCACTTGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLDDPFF*VHLAPE
Trigger: CTCCGGGGCCAAGTGGACTCAGAAGAAAGGGTCATC...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCCGGCTCACCAGTCTaGCTGACTGGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLAGSPV*LTGLPG
Trigger: CCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGGGCTGTTGGTGTCCTaGGGGGACGGTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRGLLVS*GDGDGG
Trigger: ACCTCCGTCACCGTCCCCTCAGGACACCAACAGCCC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGTGTGTGTCCCACACTaGGAGATCTGGCACTCGACC +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQVCVPH*EIWHST
Trigger: GGTCGAGTGCCAGATCTCTCAGTGTGGGACACACAC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGAAGAATGGGTCTGTTaGGTTGCCACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSEEWVC*VATGLG
Trigger: GCCCAGCCCTGTGGCAACTCAACAGACCCATTCTTC...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGTCTCAAATGGGCCATaGGTGTCGACCAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHVSNGP*VSTSRP
Trigger: TGGACGGCTGGTCGACACTCATGGCCCATTTGAGAC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCATGCCGGAGAATCCTaGATGGCAGGTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQHAGES*MAGVRA
Trigger: TGCCCTGACACCTGCCATTCAGGATTCTCCGGCATG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTCCACGCACCGGTCTaGGCAGAACATGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIRELHAPV*AEHAGE
Trigger: TTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCCCTTGGTCCCACACTaGCCATGCACGCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRPLVPH*PCTQLA
Trigger: TGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACCACCAGGAAGGGCGTaGGGTCTATGCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAPPGRA*GLCGRR
Trigger: GCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCCACCAGGAAGGGCGTaGGGTCTATGCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSPPGRA*GLCGRR
Trigger: GCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGG...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCGGAAGTCCCCGCACTaGATGGCTCCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDARKSPH*MAPPVQ
Trigger: CTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGGATGGCGTACCCACTaGGGACCTGGCAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGGWRTH*GPGNAA
Trigger: AGCTGCGTTGCCAGGTCCTCAGTGGGTACGCCATCC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538115.5
ENST00000542585.5
CDS-3UTR TCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGGCACAGGTGCACCGCTaGGAGCAGTCCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREAQVHR*EQSSVR
Trigger: TCTGACTGAGGACTGCTCTCAGCGGTGCACCTGTGC...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCCCCCCGCTCTGCAGCTaGAGGGCTCACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGPPLCS*RAHTAG
Trigger: TCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGG...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCTTCACACTCGCAGGTaGAGGTGGCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPLHTRR*RWLPAP
Trigger: GGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAG...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAACACAGAGGGGGCCTTaGTCCCATAGGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSTQRGP*SHRSGL
Trigger: CAGCCCCGACCTATGGGAGCAAGGCCCCCTCTGTGT...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGACACAGAGGGGGCCTTaGTCCCATAGGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTTQRGP*SHRSGL
Trigger: CAGCCCCGACCTATGGGAGCAAGGCCCCCTCTGTGT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGACAAAAAGCCAGGGTTaGAGACACAGCCCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGTKSQG*RHSPPD
Trigger: GTCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGT...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGTGTCTCCTGCTGGGCTaGCGTCCAACTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQCLLLG*RPTSGG
Trigger: ACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACA...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTCGTCCTGGTCCGTCTaGCAGCTGTTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGSSWSV*QLFPSS
Trigger: GGAGCTGGGGAACAGCTGGCAGACGGACCAGGACGA...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGTGCACAGCAGGTGCTaGAGCCCCTGGAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTVHSRC*SPWNPH
Trigger: GTGCGGATTCCAGGGGCTGCAGCACCTGCTGTGCAC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCACACAGGGAGTACTTaGTGTTGGGCGGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAHTGST*CWAGRP
Trigger: TGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCCACACAGGGAGTACTTaGTGTTGGGCGGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRHTGST*CWAGRP
Trigger: TGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTG...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACTGCATGGAATCGCCTaGAAGCTTTCTGTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTLHGIA*KLSVGA
Trigger: CGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGTCCAGGCGTCTGCCATaGTGTTCTCCTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPSRRLP*CSPGSW
Trigger: CCAGCTGCCAGGAGAACAGCATGGCAGACGCCTGGA...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGGAGGTCGGCCGCCCTaGAGTTTCCACTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPGGRPP*SFHSGS
Trigger: AGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCAGGAGCCCGGAGCGCTaGCTCGCACTTTTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLRSPER*LALFPR
Trigger: GCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCT...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGGCAGTTGGTGTAGCTaGTGTAGGCAGGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGGSWCS*CRQGIP
Trigger: TGGAATGCCCTGCCTACAGCAGCTACACCAACTGCC...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGAGCCGGGCTGACAAATaGAGCCCTCAGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTSRADK*SPQRRQ
Trigger: CTGCCTGCGCTGAGGGCTGCATTTGTCAGCCCGGCT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGAATGGCTCCTCCCGTaGAGACACACTTCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSEWLLP*RHTSPC
Trigger: GCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTC...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGGCGGATCCATCTTGTTaGGTCCTTCCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPADPSC*VLPRGG
Trigger: CCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGC...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGCTGTTGCTCGCCAGCTaGTCCGGGCTACATTCGGAC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRLLLAS*SGLHSD
Trigger: GTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAG...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGGGCCCTGGGGGTCTaGCAGCACCCTACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFGALGV*QHPTGL
Trigger: CAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGTGAGCTGGCACAGGTaGACCGCTGAGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPVSWHR*TAESSP
Trigger: AGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCAC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCGTGAGCTGGCACAGGTaGACCGCTGAGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRVSWHR*TAESSP
Trigger: AGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCAC...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGTGAAGGTGGCTCCCTaGTCCCGACACTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGVKVAP*SRHCPS
Trigger: TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCAC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACGCAGTCCCCGGGGTCTaGCAGGTTGGCACAGGATGC +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHAVPGV*QVGTGC
Trigger: GCATCCTGTGCCAACCTGGCAGACCCCGGGGACTGC...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAGGCCCCGGAGGCAGTTaGGATCCAGGTCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPGPGGS*DPGPVT
Trigger: TGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCC...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGTGCCACAGCTGGCTCTaGGGTCTTTCCAAAAACGCC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGCHSWL*GLSKNA
Trigger: GGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCA...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACCATCCCCGGAAGTCTaGACCCAGTCACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTPSPEV*TQSQKG
Trigger: TCCCTTCTGTGACTGGGTCCAGACTTCCGGGGATGG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACCACGCAGATGTCACCTaGGGCGCAGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHHADVT*GAEGPA
Trigger: AGCCGGCCCTTCTGCGCCCCAGGTGACATCTGCGTG...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACACGCAGATGTCACCTaGGGCGCAGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQHADVT*GAEGPA
Trigger: AGCCGGCCCTTCTGCGCCCCAGGTGACATCTGCGTG...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCGGGGCTGGGATGGGGTaGCCTCAGGGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRGAGMG*PQGCEL
Trigger: AAGCTCACAGCCCTGAGGCCACCCCATCCCAGCCCC...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTCCAGCCCAGTGGCTGTaGGGCTGGGATGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFPAQWL*GWDGVA
Trigger: GGCCACCCCATCCCAGCCCCACAGCCACTGGGCTGG...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAGCGTGGCCTGCGTCCTaGCAGGTGGTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTAWPAS*QVVVMV
Trigger: CACCATGACCACCACCTGCCAGGACGCAGGCCACGC...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAGCGTGGCCTGCGTCCTaGCAGGTGGTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQAWPAS*QVVVMV
Trigger: CACCATGACCACCACCTGCCAGGACGCAGGCCACGC...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGGGGCGGGCAGGCCATTaGGCAGAAGTGGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLGRAGH*AEVGFP
Trigger: AGGGAACCCCACTTCTGCCCAATGGCCTGCCCGCCC...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGCAGGTGCCCATGAAGTaGTGCAAGGCGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKQVPMK*CKAPSK
Trigger: CTTCGATGGCGCCTTGCACCACTTCATGGGCACCTG...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCAGCTGTCTTGGGACCTaGACCAGCAAGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRSCLGT*TSKAGS
Trigger: TGACCCGGCCTTGCTGGTCCAGGTCCCAAGACAGCT...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACTGTGGTGTCGCCCTTaGTCCCACACTGACCATGCA +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSLWCRP*SHTDHA
Trigger: TGCATGGTCAGTGTGGGACCAAGGGCGACACCACAG...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGCTGTGGTGTCGCCCTTaGTCCCACACTGACCATGCA +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRLWCRP*SHTDHA
Trigger: TGCATGGTCAGTGTGGGACCAAGGGCGACACCACAG...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGCACAGGGCAGTGCTTTaGGGCAGTCCCTCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQHRAVL*GSPSGC
Trigger: ACAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTG...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGTGGTAGGAGCCCGCTaGGTCAGTGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRVVGAR*VSAATL
Trigger: CAGTGTGGCTGCACTGACCCAGCGGGCTCCTACCAC...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGAAGGGCAAGGCCATaGCGGGGTGGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHRRARP*RGGTLS
Trigger: TGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCT...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGGCTGTTTCTCCAGAGTaGGGGCTTGAGCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRAVSPE*GLEPLA
Trigger: AGCCAGGGGCTCAAGCCCCCACTCTGGAGAAACAGC...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGAGGCAGAGGGGACTTTaGCGCCCTCACACCGGCCAT +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTRQRGL*RPHTGH
Trigger: ATGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACATCTTGCCCAGAGGGATaGAGCCACCATGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTSCPEG*SHHGHP
Trigger: AGGATGCCCATGGTGGCTCCATCCCTCTGGGCAAGA...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGAAGTGAGCTGGCAGTaGGACCCAGAGGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPEVSWQ*DPEGHR
Trigger: CCGATGCCCCTCTGGGTCCCACTGCCAGCTCACTTC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGGGACGGCCATCTTCTaGTTGTTGACCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGGTAIF*LLTTSS
Trigger: GGAGCTTGTGGTCAACAACCAGAAGATGGCCGTCCC...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAAAGGTGTTGAGGTTCTaGGTCAGGGCGCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPKVLRF*VRAPLG
Trigger: GCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTT...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGAAGGTGTTGAGGTTCTaGGTCAGGGCGCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRKVLRF*VRAPLG
Trigger: GCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTT...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCAGCACCCTACAGGCCTaGGTGCTGTTGCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRSTLQA*VLLLAS
Trigger: GCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCT...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACTCTTGGAAGGGCTCTaGGGCCACCGTCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPLLEGL*GHRLVT
Trigger: TGTCACCAGACGGTGGCCCCAGAGCCCTTCCAAGAG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACTGTGTCCACCAGCCTaGCCAGTCTGTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPLCPPA*PVCLPP
Trigger: AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCTGTGTCCACCAGCCTaGCCAGTCTGTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRLCPPA*PVCLPP
Trigger: AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACGGGGTCTGCCAGGTTaGCACAGGATGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTRGLPG*HRMLGR
Trigger: CCTGCCCAGCATCCTGTGCCAACCTGGCAGACCCCG...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR TCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCGAGGCTTCTCTTTCCTaGAAAGGGCAGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPREASLS*KGQPPP
Trigger: TGGTGGGGGCTGCCCTTTTCAGGAAAGAGAAGCCTC...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCCCATAGGTCGGGGCTaGGCAGGCGGGCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGPIGRG*AGGPLP
Trigger: GGGGAGTGGCCCGCCTGCTCAGCCCCGACCTATGGG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGTCCTGAGGGGACGGTaGCGGAGGTGTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADVLRGR*RRCSAS
Trigger: ACTGGCAGAACACCTCCGTCACCGTCCCCTCAGGAC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGTCCTGAGGGGACGGTaGCGGAGGTGTTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAVLRGR*RRCSAS
Trigger: ACTGGCAGAACACCTCCGTCACCGTCCCCTCAGGAC...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGGGCTGTTGGTGTCCTaGGGGGACGGTGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCGLLVS*GDGDGG
Trigger: ACCTCCGTCACCGTCCCCTCAGGACACCAACAGCCC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAGCCTCCCGTCAAAGGTaGCATAATGAGGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSASRQR*HNEGLR
Trigger: ACGGAGACCCTCATTATGTCACCTTTGACGGGAGGC...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGACCGCTCCCCTACCTTaGAGTAGCTGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTTAPLP*SSCLQG
Trigger: ACCCTGCAGGCAGCTACTTCAAGGTAGGGGAGCGGT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGTCACGTGGACGGCTTTaGTGTAGGAGACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRSRGRL*CRRPPG
Trigger: TCCTGGAGGTCTCCTACATCAAAGCCGTCCACGTGA...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGACGAGGTTGCTGCTaGGCCTTATGGTCACCCGGC +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGGRGCC*ALWSPG
Trigger: GCCGGGTGACCATAAGGCTCAGCAGCAACCTCGTCC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCGGACGAGGTTGCTGCTaGGCCTTATGGTCACCCGGC +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRGRGCC*ALWSPG
Trigger: GCCGGGTGACCATAAGGCTCAGCAGCAACCTCGTCC...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGTGCTCTGGAAGCAGGTaGTGTTGTTGTGGACGGAGC +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRCSGSR*CCCGRS
Trigger: GCTCCGTCCACAACAACATCACCTGCTTCCAGAGCA...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGACTCCCCTGGGAGCTaGCACACTCCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRDSPGS*HTPTPE
Trigger: CTCAGGTGTGGGAGTGTGTCAGCTCCCAGGGGAGTC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGGCCCTTCTGCAGGGTaGCCTGGGCATCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGGPSAG*PGHRRC
Trigger: ACATCTACGATGCCCAGGTCACCCTGCAGAAGGGCC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGGAAGTCCCCGCACTaGATGGCTCCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTRKSPH*MAPPVQ
Trigger: CTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRTQQDP*AGTGAP
Trigger: CGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCCCAGTCTTCATCGTCTaGGGACACTTGGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLPVFIV*GHLGPV
Trigger: GACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGG...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTGGGCAGGGTGAACCCTaGGGGCACAGTGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIGQGEP*GHSDGG
Trigger: ACCACCGTCACTGTGCCCGCAGGGTTCACCCTGCCC...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGGGCAGGGTGAACCCTaGGGGCACAGTGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCGQGEP*GHSDGG
Trigger: ACCACCGTCACTGTGCCCGCAGGGTTCACCCTGCCC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGGCTGAACCACTCTaGCCCAGGCTCATAGTAGTC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPGAEPL*PRLIVV
Trigger: GACTACTATGAGCCTGGGGCAGAGTGGTTCAGCCCC...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACAGGGTCACGTAGACTTTaGTCAGGCAGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTGSRRL*SGRTRL
Trigger: AAGGCGTGTCCTGCCTGAGCAAAGTCTACGTGACCC...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGAAACCGAACTCCGTCTaGAGCTCCACAAACCGCCCG +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRKPNSV*SSTNRP
Trigger: CGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTT...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTCGTCCTGGTCCGTCTaGCAGCTGTTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRSSWSV*QLFPSS
Trigger: GGAGCTGGGGAACAGCTGGCAGACGGACCAGGACGA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGTGCACAGCAGGTGCTaGAGCCCCTGGAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGVHSRC*SPWNPH
Trigger: GTGCGGATTCCAGGGGCTGCAGCACCTGCTGTGCAC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACAGGCGGCCCCCAGCTaGATGGAATCGCCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTQAAPS*MESPAS
Trigger: GCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGGCAGCTGGAGGGCTTaGCACCCACAAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPGSWRA*HPQGNS
Trigger: GCTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAACACGGTGGCCCTTCTaGAGGGTGACCTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGTRWPF*RVTWAS
Trigger: CGATGCCCAGGTCACCCTGCAGAAGGGCCACCGTGT...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGAGGTCGGCCGCCCTaGAGTTTCCACTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGGGRPP*SFHSGS
Trigger: AGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGGGAGGTCGGCCGCCCTaGAGTTTCCACTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLGGRPP*SFHSGS
Trigger: AGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCC...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGCCGGGCTGACAAATaGAGCCCTCAGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRSRADK*SPQRRQ
Trigger: CTGCCTGCGCTGAGGGCTGCATTTGTCAGCCCGGCT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGAGCCGGGCTGACAAATaGAGCCCTCAGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRSRADK*SPQRRQ
Trigger: CTGCCTGCGCTGAGGGCTGCATTTGTCAGCCCGGCT...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCCACCATGGGCATCCTTaGAGCCACACTGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLHHGHP*SHTDFW
Trigger: CCAGAAGTCAGTGTGGCTGCAAGGATGCCCATGGTG...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGCGGATCCATCTTGTTaGGTCCTTCCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRADPSC*VLPRGG
Trigger: CCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGC...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCTGTTGCTCGCCAGCTaGTCCGGGCTACATTCGGAC +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLLLLAS*SGLHSD
Trigger: GTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAG...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTGTGGTTCCCCAGGGTaGAGACCTCCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVICGSPG*RPPPLC
Trigger: GCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCATGTGGTTCCCCAGGGTaGAGACCTCCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLACGSPG*RPPPLC
Trigger: GCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACA...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGCCCACCAGGTTAGATaGTGGCTTTCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRAHQVR*WLSGRW
Trigger: CCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGC...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCCTCAGTCAGAAAGCTaGTGCCCAGCCACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREPQSES*CPATED
Trigger: GTCCTCAGTGGCTGGGCAGCAGCTTTCTGACTGAGG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGCATGAGGACCCTAAGTaGTTGCTCCCAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPHEDPK*LLPGER
Trigger: CCTCTCCCCTGGGAGCAACCACTTAGGGTCCTCATG...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCATGGGAGAGGGCCCACTaGCTCGAACCCAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPWERAH*LEPSLH
Trigger: ATGAAGACTGGGTTCGAGCCAGTGGGCCCTCTCCCA...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGGCCCCGGAGGCAGTTaGGATCCAGGTCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRGPGGS*DPGPVT
Trigger: TGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAAACAGCCTGCCAGTTaGGCCCAGGTTGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLKQPAS*AQVVLR
Trigger: TCTCAGGACAACCTGGGCCCAACTGGCAGGCTGTTT...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAACCAGTCTGACTGACTaGCCTGCCTGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPTSLTD*PAWENS
Trigger: CGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGT...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCACGCAGATGTCACCTaGGGCGCAGAAGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCHADVT*GAEGPA
Trigger: AGCCGGCCCTTCTGCGCCCCAGGTGACATCTGCGTG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGAGCTGCATGGGCTGTTaGTGTCCTGAGGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLSCMGC*CPEGTV
Trigger: CACCGTCCCCTCAGGACACCAACAGCCCATGCAGCT...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGTAGACCAAGCAGGTaGCAGTGCCTGCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTRRPSR*QCLRRG
Trigger: ACCCCTACGCAGGCACTGCCACCTGCTTGGTCTACG...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTCCTGGTCCTCGTCCTaGTCCGTCTGCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGSWSSS*SVCQLF
Trigger: GAACAGCTGGCAGACGGACCAGGACGAGGACCAGGA...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGCGTCCTGGCAGGTGGTaGTCATGGTGGACATGTGTG +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQRPGRW*SWWTCV
Trigger: CACACATGTCCACCATGACCACCACCTGCCAGGACG...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGCGTCCTGGCAGGTaGTGGTCATGGTGGACATGT +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIRELRPGR*WSWWTC
Trigger: ACATGTCCACCATGACCACCACCTGCCAGGACGCAG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCGTGGCCTGCGTCCTaGCAGGTGGTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLAWPAS*QVVVMV
Trigger: CACCATGACCACCACCTGCCAGGACGCAGGCCACGC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGCCATTGGGCAGAAGTaGGGTTCCCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTAIGQK*GSLQGF
Trigger: GAAGCCCTGGAGGGAACCCCACTTCTGCCCAATGGC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTGGAGGCACCCACACTaGGAGCGAGGTATGCACTCG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGWRHPH*ERGMHS
Trigger: CGAGTGCATACCTCGCTCCCAGTGTGGGTGCCTCCA...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCAACTCTTTGCAGCCTaGCTTGTACCACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRQLFAA*LVPPLP
Trigger: GGGGAGCGGTGGTACAAGCCAGGCTGCAAAGAGTTG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTGGCCACAGAACTCCTaGGCCCTACACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRWPQNS*ALHLQG
Trigger: GCCCTGGAGGTGTAGGGCCCAGGAGTTCTGTGGCCA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGGTAGGGCCACCCGATaGCCATTCAGCATGACCTTA +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHGRATR*PFSMTL
Trigger: TAAGGTCATGCTGAATGGCCATCGGGTGGCCCTACC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTAGCGGCACAGGGCTGTaGTGTCGCCCTTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVISGTGL*CRPWSH
Trigger: GTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCT...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACACAGGGCAGTGCTTTaGGGCAGTCCCTCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPHRAVL*GSPSGC
Trigger: ACAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTG...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACCTGAGGCCCGACAATaGAGCAGCCCATCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAPEARQ*SSPSRA
Trigger: GGCCCTGGATGGGCTGCTCCATTGTCGGGCCTCAGG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCCTGAGGCCCGACAATaGAGCAGCCCATCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIPEARQ*SSPSRA
Trigger: GGCCCTGGATGGGCTGCTCCATTGTCGGGCCTCAGG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGAGAAGGGCAAGGCCATaGCGGGGTGGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQRRARP*RGGTLS
Trigger: TGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCT...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTGACCCCAGGGATCTaGGAGATGGCGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTLTPGI*EMAGRV
Trigger: CACCCTCCCCGCCATCTCCCAGATCCCTGGGGTCAG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCCTGGCTCTGGCAGGTaGCCCCGAAGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTPGSGR*PRRLAE
Trigger: CTCTGCAAGCCTTCGGGGCCACCTGCCAGAGCCAGG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAGCTGTTTCTCCAGAGTaGGGGCTTGAGCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPAVSPE*GLEPLA
Trigger: AGCCAGGGGCTCAAGCCCCCACTCTGGAGAAACAGC...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGCAGAGGGGACTTTaGCGCCCTCACACCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRRQRGL*RPHTGH
Trigger: ATGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCAGTCCCCGCACTGAATaGCTCCTCCCGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPSPRTE*LLPCRH
Trigger: GTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACT...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGAGTCCCCGCACTGAATaGCTCCTCCCGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTSPRTE*LLPCRH
Trigger: GTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGGGACGGCCATCTTCTaGTTGTTGACCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRGTAIF*LLTTSS
Trigger: GGAGCTTGTGGTCAACAACCAGAAGATGGCCGTCCC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGAAGGTGTTGAGGTTCTaGGTCAGGGCGCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLKVLRF*VRAPLG
Trigger: GCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTT...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTACATTCGGACACTTaGAGGCCCGTGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADLHSDT*RPVRRP
Trigger: GGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAG...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGCAGCAAAGGGGCCCTaGGGGTCTGCCAGCACCCTA +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCAAKGP*GSASTL
Trigger: TAGGGTGCTGGCAGACCCCCAGGGCCCCTTTGCTGC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACTCTTGGAAGGGCTCTaGGGCCACCGTCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPLLEGL*GHRLVT
Trigger: TGTCACCAGACGGTGGCCCCAGAGCCCTTCCAAGAG...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTTACCCACTGAGGACCTaGCAACGCAGCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAYPLRT*QRSSSC
Trigger: GCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGGTA...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538115.5
ENST00000542585.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCATACCCACTGAGGACCTaGCAACGCAGCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPYPLRT*QRSSSC
Trigger: GCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGGTA...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538115.5
ENST00000542585.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCACCAGGTTAGATGCTaGCTTTCTGGGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPHQVRC*LSGRWR
Trigger: GCGCCACCTCCCAGAAAGCCAGCATCTAACCTGGTG...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACTGTGTCCACCAGCCTaGCCAGTCTGTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSLCPPA*PVCLPP
Trigger: AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGTTGGCACAGGATGCTaGGCAGGGTGTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHVGTGC*AGCHTA
Trigger: AGCTGTATGACACCCTGCCCAGCATCCTGTGCCAAC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCATAGCCTGGGATGCTaGCGCAGCCTTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPHSLGC*RSLPRR
Trigger: CCTGCGTGGAAGGCTGCGCCAGCATCCCAGGCTATG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGACTGTAGGCATAGCCTaGGATGCTGGCGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQTVGIA*DAGAAF
Trigger: GAAGGCTGCGCCAGCATCCCAGGCTATGCCTACAGT...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR TCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCCATAGGTCGGGGCTaGGCAGGCGGGCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPPIGRG*AGGPLP
Trigger: GGGGAGTGGCCCGCCTGCTCAGCCCCGACCTATGGG...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAGATGACCCTTTCTTCTaGGTCCACTTGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSDDPFF*VHLAPE
Trigger: CTCCGGGGCCAAGTGGACTCAGAAGAAAGGGTCATC...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGATGACCCTTTCTTCTaGGTCCACTTGGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGDDPFF*VHLAPE
Trigger: CTCCGGGGCCAAGTGGACTCAGAAGAAAGGGTCATC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGAAGTGCACTTGCCCATaGAGCCAAAGTGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRKCTCP*SQSASR
Trigger: ACGGGAGGCACTTTGGCTTCATGGGCAAGTGCACTT...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCGGGAGAGTAACTTGCTaGCCCCCAACCAGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGGRVTC*PPTRVR
Trigger: ACGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCC...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAACCACCTGGTACTTCTaGCACTCCTGGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPTTWYF*HSWSSS
Trigger: GGACGAGGACCAGGAGTGTCAGAAGTACCAGGTGGT...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCTCCACGCACCGGTCTaGGCAGAACATGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPLHAPV*AEHAGE
Trigger: TTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAAGGTGCAGGTGCCCATaGAGTGGTGCAAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQRCRCP*SGARRH
Trigger: ATGGCGCCTTGCACCACTTCATGGGCACCTGCACCT...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTAGGTGCAGGTGCCCATaGAGTGGTGCAAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDARCRCP*SGARRH
Trigger: ATGGCGCCTTGCACCACTTCATGGGCACCTGCACCT...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGACAGCCTCTGAGCAGTaGGATGCTGAGGTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPTASEQ*DAEVKD
Trigger: GTCTTTGACCTCAGCATCTCACTGCTCAGAGGCTGT...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGGACGAGGTTGCTGCTaGGCCTTATGGTCACCCGGC +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCGRGCC*ALWSPG
Trigger: GCCGGGTGACCATAAGGCTCAGCAGCAACCTCGTCC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGACACACTCCCACACCTaGGGCCCGACAATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLTHSHT*GPTMEQ
Trigger: CTGCTCCATTGTCGGGCCTCAGGTGTGGGAGTGTGT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGGGGTCGCCATAGACTaGGCATTGTTCAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQGVAID*ALFRLV
Trigger: GACAAGTCTGAACAATGCTCAGTCTATGGCGACCCC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGCCATCTTCTGGTTGTTaGCCACAAGCTCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPPSSGC*PQAPDQ
Trigger: CTGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGG...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGTCCTTCCACCAAAGCTaGCGACCAGCTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQSFHQS*RPAQSR
Trigger: CCGACTTTGAGCTGGTCGTCAGCTTTGGTGGAAGGA...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGGGGCCACCGTCTGGTaGCAGGCAGCAAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAGATVW*QAAKGP
Trigger: GGGCCCCTTTGCTGCCTGTCACCAGACGGTGGCCCC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTHCPSF*QGFCRH
Trigger: GTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTG...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCCACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGHCPSF*QGFCRH
Trigger: GTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTG...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTACACAGAGGGGGCCTTaGTCCCATAGGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTTQRGP*SHRSGL
Trigger: CAGCCCCGACCTATGGGAGCAAGGCCCCCTCTGTGT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCATGTGGTGGGCAAAGTaGACACAGAGGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPMWWAK*TQRGPC
Trigger: GCAAGGCCCCCTCTGTGTGCACTTTGCCCACCACAT...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCTCCCGCAGGGCCCATaGCATGGACGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDALPQGP*HGRVHF
Trigger: AAAATGGACCCGTCCATGGCATGGGCCCTGCGGGAG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAGACATCACCAAGGCTaGCAGCCCAGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLRHHQG*QPSGCG
Trigger: CCCACAGCCACTGGGCTGGCAGCCTTGGTGATGTCT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAACAAAAAGCCAGGGTTaGAGACACAGCCCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPTKSQG*RHSPPD
Trigger: GTCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGT...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGGCAGGTGGCAGTGCCTaGGTAGGGGTGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLAGGSA*VGVASI
Trigger: TATGGATGCCACCCCTACGCAGGCACTGCCACCTGC...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCTGTGTGCACAGCAGGTaGTGCAGCCCCTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRCVHSR*CSPWNP
Trigger: CGGATTCCAGGGGCTGCAGCACCTGCTGTGCACACA...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATGTGTGCACAGCAGGTaGTGCAGCCCCTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTCVHSR*CSPWNP
Trigger: CGGATTCCAGGGGCTGCAGCACCTGCTGTGCACACA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCTGGTGGACATGTGTGTaGACAGCAGGTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPWWTCV*TAGAAA
Trigger: GGCTGCAGCACCTGCTGTGCACACACATGTCCACCA...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTGGTGGACATGTGTGTaGACAGCAGGTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGWWTCV*TAGAAA
Trigger: GGCTGCAGCACCTGCTGTGCACACACATGTCCACCA...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGGACGAAGCCCGGATTaGATTCACAGGCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPGRSPD*IHRPPR
Trigger: GCGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCC...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCTGCATGGAATCGCCTaGAAGCTTTCTGTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLLHGIA*KLSVGA
Trigger: CGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAG...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCTGCATGGAATCGCCTaGAAGCTTTCTGTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPLHGIA*KLSVGA
Trigger: CGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAG...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATGTGGACGGAGCAGGTaGAGAGCCTGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTCGRSR*RAWCRC
Trigger: ACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGCTCACAGAGGGTGTTTaGACAGTCCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPLTEGV*TVHQEG
Trigger: CCCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAG...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCACCATGGGCATCCTTaGAGCCACACTGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRHHGHP*SHTDFW
Trigger: CCAGAAGTCAGTGTGGCTGCAAGGATGCCCATGGTG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAAGACACACTTCTCCGTaGAACCGCTGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSRHTSP*NRWRPS
Trigger: GCTGGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCT...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGGAATGGCTCCTCCCGTaGAGACACACTTCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLEWLLP*RHTSPC
Trigger: GCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTC...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCATCAGAACATAGGTCATaGGGCCTTGCAAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSSEHRS*GLASGS
Trigger: GCTACCGCTTGCAAGGCCGCATGACCTATGTTCTGA...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCAAGCCCCTCGTACATaGTGGGTAGGGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREQAPRT*WVGRSL
Trigger: CAGTGATCTCCCTACCCAGCATGTACGAGGGGCTTG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCCTCAGTCAGAAAGCTaGTGCCCAGCGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAPQSES*CPAQRV
Trigger: CACCCTCTGCGCTGGGCAGCAGCTTTCTGACTGAGG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538115.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGTCAGAAAGCTGCTaGCCAGCTGGTAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQQSESC*PAGSRC
Trigger: GCATCTACTACCAGCTGGGCAGCAGCTTTCTGACTG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCTGGCCTCCTTAGCTTaGCATCCTTCCAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRLASLA*HPSKDA
Trigger: GGCATCCTTGGAAGGATGCCAAGCTAAGGAGGCCAG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGTCGTCTGCGGACACTTaGGACCAGTCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTSSADT*DQSQRG
Trigger: ACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGA...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCTCTTCTGAGTCCACTTaGCCCCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRSSEST*PRRQLG
Trigger: TCCCAACTGCCTCCGGGGCCAAGTGGACTCAGAAGA...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCCAGGTCTTGCATTCTTaGGGTCCAGGAGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLQVLHS*GPGACS
Trigger: GCTACATGCTCCTGGACCCCAAGAATGCAAGACCTG...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACCAGGTCTTGCATTCTTaGGGTCCAGGAGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHQVLHS*GPGACS
Trigger: GCTACATGCTCCTGGACCCCAAGAATGCAAGACCTG...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGAAACAGCCTGCCAGTTaGGCCCAGGTTGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRKQPAS*AQVVLR
Trigger: TCTCAGGACAACCTGGGCCCAACTGGCAGGCTGTTT...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGCAGGGCCCATGCCATaGACGGGTCCATTTTTATGT +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKAGPMP*TGPFLC
Trigger: ACATAAAAATGGACCCGTCCATGGCATGGGCCCTGC...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCACTGACTGGCCTGCCTaGGAGAACTCGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPTDWPA*ENSSAS
Trigger: TGAGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGT...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCACCAGTCTGACTGACTaGCCTGCCTGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPTSLTD*PAWENS
Trigger: CGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGT...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGTTCGTAGCGGGCATTTaGAGGGCAGCGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRFVAGI*RAALCT
Trigger: AGTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAA...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGGGTGGCATCCATACTaGCCATTCTTAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHGWHPY*PFLSWH
Trigger: GTGCCAGCTTAAGAATGGCCAGTATGGATGCCACCC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGTCCTGGTCCTCGTCCTaGTCCGTCTGCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLSWSSS*SVCQLF
Trigger: GAACAGCTGGCAGACGGACCAGGACGAGGACCAGGA...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATCCTGGTCCTCGTCCTaGTCCGTCTGCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTSWSSS*SVCQLF
Trigger: GAACAGCTGGCAGACGGACCAGGACGAGGACCAGGA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACAAGGTGGTGGTCATGGTaGACATGTGTGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTRWWSW*TCVCTA
Trigger: TGCTGTGCACACACATGTCCACCATGACCACCACCT...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGTGGTGGTCATGGTaGACATGTGTGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHRWWSW*TCVCTA
Trigger: TGCTGTGCACACACATGTCCACCATGACCACCACCT...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGCCATTGGGCAGAAGTaGGGTTCCCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADAIGQK*GSLQGF
Trigger: GAAGCCCTGGAGGGAACCCCACTTCTGCCCAATGGC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGCAGGTGTCAGGGCATaGCTTCGCACACAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTAGVRA*LRTQGV
Trigger: TACTCCCTGTGTGCGAAGCCATGCCCTGACACCTGC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCCCGGAGAATCCTGAATaGCAGGTGTCAGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGPENPE*QVSGHG
Trigger: GCCATGCCCTGACACCTGCCATTCAGGATTCTCCGG...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACCGGAGAATCCTGAATaGCAGGTGTCAGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSPENPE*QVSGHG
Trigger: GCCATGCCCTGACACCTGCCATTCAGGATTCTCCGG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACAACTCTTTGCAGCCTaGCTTGTACCACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSQLFAA*LVPPLP
Trigger: GGGGAGCGGTGGTACAAGCCAGGCTGCAAAGAGTTG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTGGCCACAGAACTCCTaGGCCCTACACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLWPQNS*ALHLQG
Trigger: GCCCTGGAGGTGTAGGGCCCAGGAGTTCTGTGGCCA...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCGCGGTTCTCGTTGGTaGCGCTCACAACAAAATAGC +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQRGSRW*RSQQNS
Trigger: GCTATTTTGTTGTGAGCGCCACCAACGAGAACCGCG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCCCCGCGGTTCTCGTTaGTGGCGCTCACAACAAAAT +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAPRGSR*WRSQQN
Trigger: ATTTTGTTGTGAGCGCCACCAACGAGAACCGCGGGG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGTGTTCTCCTGGCAGCTaGAGGGCTTGCCACCCACAA +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLCSPGS*RACHPQ
Trigger: TTGTGGGTGGCAAGCCCTCCAGCTGCCAGGAGAACA...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAGTAGCTGCTGCCAGGTaGGCACCTCATAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSVAAAR*APHRAE
Trigger: TTCTGCCCTATGAGGTGCCCACCTGGCAGCAGCTAC...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGAGGGCCCAGCATATCTaGTTGGGTTTGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPRAQHI*LGLQVL
Trigger: GAGCACCTGCAAACCCAACCAGATATGCTGGGCCCT...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGTTGATTAGCACACGGTaGCCCTTCTGCAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRLISTR*PFCRVT
Trigger: GGTCACCCTGCAGAAGGGCCACCGTGTGCTAATCAA...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGCTGTTTCTCCAGAGTaGGGGCTTGAGCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRAVSPE*GLEPLA
Trigger: AGCCAGGGGCTCAAGCCCCCACTCTGGAGAAACAGC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAGGAGGGAAGGCAGTTaGTGTAGCTGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPRREGS*CSCCRQ
Trigger: CTGCCTACAGCAGCTACACCAACTGCCTTCCCTCCT...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTCTCCGTGCAACCGCTaGAGACCCAGCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHSPCNR*RPSSCP
Trigger: TGGGCAAGAGCTGGGTCTCCAGCGGTTGCACGGAGA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTGAAGTGAGCTGGCAGTaGGACCCAGAGGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIEVSWQ*DPEGHR
Trigger: CCGATGCCCCTCTGGGTCCCACTGCCAGCTCACTTC...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCTTGTCGGAAGTGAGCTaGCAGTGGGACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRLSEVS*QWDPEG
Trigger: CCCCTCTGGGTCCCACTGCCAGCTCACTTCCGACAA...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATTGTCGGAAGTGAGCTaGCAGTGGGACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTLSEVS*QWDPEG
Trigger: CCCCTCTGGGTCCCACTGCCAGCTCACTTCCGACAA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGGGTCAGGGCGCCACTaGGCAGCATCATGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGGSGRH*AASCHS
Trigger: AGAATGACATGATGCTGCCCAGTGGCGCCCTGACCC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGATCCGTGAGCTaGCACAGGTGCACCGCTGAG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLAGSVS*HRCTAE
Trigger: CTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLKQPWV*FPRVQT
Trigger: GGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCTGGCTTTCTGGGAGGTaGCGCATCTCGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPWLSGR*RISRLH
Trigger: ATGGAGCCTCGAGATGCGCCACCTCCCAGAAAGCCA...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCAGCCACTGAGGACCTaGCAACGCAGCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAQPLRT*QRSSSC
Trigger: GCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGCTG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGGGCCCAGGTTGTCCTaGGAAGAGAGTGTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADGPRLS*EESVFP
Trigger: CGGAAACACACTCTCTTCTCAGGACAACCTGGGCCC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGGCCCAGGTTGTCCTaGGAAGAGAGTGTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAGPRLS*EESVFP
Trigger: CGGAAACACACTCTCTTCTCAGGACAACCTGGGCCC...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGGCCTCCCGTCAAAGGTaGCATAATGAGGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLASRQR*HNEGLR
Trigger: ACGGAGACCCTCATTATGTCACCTTTGACGGGAGGC...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCAAGTGCACTTGCCCATaGAGCCAAAGTGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPKCTCP*SQSASR
Trigger: ACGGGAGGCACTTTGGCTTCATGGGCAAGTGCACTT...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGGGAGAGTAACTTGCTaGCCCCCAACCAGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPGRVTC*PPTRVR
Trigger: ACGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCC...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACACCACCTGGTACTTCTaGCACTCCTGGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADTTWYF*HSWSSS
Trigger: GGACGAGGACCAGGAGTGTCAGAAGTACCAGGTGGT...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGTCTCAAATGGGCCATaGGTGTCGACCAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADVSNGP*VSTSRP
Trigger: TGGACGGCTGGTCGACACTCATGGCCCATTTGAGAC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCCATGCCGGAGAATCCTaGATGGCAGGTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRHAGES*MAGVRA
Trigger: TGCCCTGACACCTGCCATTCAGGATTCTCCGGCATG...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCACCGCTCCCCTACCTTaGAGTAGCTGCCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCTAPLP*SSCLQG
Trigger: ACCCTGCAGGCAGCTACTTCAAGGTAGGGGAGCGGT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTAGGTGCAGGTGCCCATaGAGTGGTGCAAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIRCRCP*SGARRH
Trigger: ATGGCGCCTTGCACCACTTCATGGGCACCTGCACCT...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTGCTCTGGAAGCAGGTaGTGTTGTTGTGGACGGAGC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGCSGSR*CCCGRS
Trigger: GCTCCGTCCACAACAACATCACCTGCTTCCAGAGCA...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTACACACTCCCACACCTaGGGCCCGACAATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTTHSHT*GPTMEQ
Trigger: CTGCTCCATTGTCGGGCCTCAGGTGTGGGAGTGTGT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCGTTGGCCCCACAGGGTaGCCCGCAGGTGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSVGPTG*PAGVHL
Trigger: CAAATGAACACCTGCGGGTCACCCTGTGGGGCCAAC...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTGTTGGCCCCACAGGGTaGCCCGCAGGTGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIVGPTG*PAGVHL
Trigger: CAAATGAACACCTGCGGGTCACCCTGTGGGGCCAAC...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCCAGCTCAAAGTCGGTaGCCAGGTAGAGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSPAQSR*PGRAVG
Trigger: GCCAACGGCTCTACCTGGTCACCGACTTTGAGCTGG...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCATCCTTCCACCAAAGCTaGCGACCAGCTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPSFHQS*RPAQSR
Trigger: CCGACTTTGAGCTGGTCGTCAGCTTTGGTGGAAGGA...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCTGTTGCCAAAGGTGTTaGGGTTCTGGGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGCCQRC*GSGSGR
Trigger: GCGCCCTGACCCAGAACCTCAACACCTTTGGCAACA...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTGTTGCCAAAGGTGTTaGGGTTCTGGGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHCCQRC*GSGSGR
Trigger: GCGCCCTGACCCAGAACCTCAACACCTTTGGCAACA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGCACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRHCPSF*QGFCRH
Trigger: GTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTG...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCAGGACCCTAAGTGGTTaGTCCCAGGGGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGRTLSG*SQGRGE
Trigger: TTCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCT...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGTGTCCAGGTAGGCAGTaGTACCCCGTGTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLCPGRQ*YPVFPQ
Trigger: TTGAGGGAACACGGGGTAGCACTGCCTACCTGGACA...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGAGGAGGACAGCTTTCTaGCCAGGTCTTGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKRRTAF*PGLAFL
Trigger: CAAGAATGCAAGACCTGGGCAGAAAGCTGTCCTCCT...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACATAAATGTGGAGGGCTaGACCAGGAGACTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHINVEG*TRRLAP
Trigger: CGGGGCCAGTCTCCTGGTGCAGCCCTCCACATTTAT...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTGACAGAAACAGCCTaGCAGTTGGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRLTETA*QLGPGC
Trigger: ACAACCTGGGCCCAACTGGCAGGCTGTTTCTGTCAA...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGGCACTCGACCCGACTaGCGGGCCAGCAGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPGTRPD*RASSGN
Trigger: ATTGCCGCTGCTGGCCCGGCAGTCGGGTCGAGTGCC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGACGCCTTCCTGTCCCTaGTCCTCATTCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLTPSCP*SSFLAV
Trigger: GACAGCCAAGAATGAGGAGCAGGGACAGGAAGGCGT...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCACAAACCGCCCGCTTaGACCCAGGAAGACGCCTTT +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLHKPPA*TQEDAF
Trigger: AAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTG...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCTGTCTCCTGCTGGGCTaGCGTCCAACTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPCLLLG*RPTSGG
Trigger: ACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACA...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCCTGGCCCCGACATGCTaGTCTGCAGAGATGAATCAC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGLAPTC*SAEMNH
Trigger: GTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAG...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCTGGCCCCGACATGCTaGTCTGCAGAGATGAATCAC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGLAPTC*SAEMNH
Trigger: GTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGAAGCGGCCTTCACGTaGAGCAGGCATGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPEAAFT*SRHVSN
Trigger: ATTTGAGACATGCCTGCTGCACGTGAAGGCCGCTTC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTGTGTGCACAGCAGGTaGTGCAGCCCCTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLCVHSR*CSPWNP
Trigger: CGGATTCCAGGGGCTGCAGCACCTGCTGTGCACACA...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTTGAAGTAGCTGCCTaGAGGGTGGAGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADLEVAA*RVEAPT
Trigger: TGTGGGTGCCTCCACCCTGCAGGCAGCTACTTCAAG...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTAGACGCACAACTCTTTaGAGCCTGGCTTGTACCACC +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAARRTTL*SLACTT
Trigger: GGTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCT...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGCAGCTGGAGGGCTTaGCACCCACAAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAGSWRA*HPQGNS
Trigger: GCTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCC...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCTTGTTCCAGGCGTCTaGCATGCTGTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRLVPGV*HAVLLA
Trigger: TGCCAGGAGAACAGCATGGCAGACGCCTGGAACAAG...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCTCGGGTTGTTTATGCTaGTGCAGGTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPSGCLC*CRCLGR
Trigger: CCTGCCCAGACACCTGCAGCAGCATAAACAACCCGA...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCCCTCGGGTTGTTTATaGTGCTGCAGGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLPSGCL*CCRCLG
Trigger: GCCCAGACACCTGCAGCAGCATAAACAACCCGAGGG...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGAGGTGCAGAGCCTGGTaGAGGTGTTCTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLRCRAW*RCSLCT
Trigger: GGTACACAGAGAACACCTGCACCAGGCTCTGCACCT...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCAGGTGCAGAGCCTGGTaGAGGTGTTCTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGRCRAW*RCSLCT
Trigger: GGTACACAGAGAACACCTGCACCAGGCTCTGCACCT...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCTCACAGAGGGTGTTTaGACAGTCCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGLTEGV*TVHQEG
Trigger: CCCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCACCATGGGCATCCTTaGAGCCACACTGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGHHGHP*SHTDFW
Trigger: CCAGAAGTCAGTGTGGCTGCAAGGATGCCCATGGTG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAGACACACTTCTCCGTaGAACCGCTGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLRHTSP*NRWRPS
Trigger: GCTGGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGAATGGCTCCTCCCGTaGAGACACACTTCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADEWLLP*RHTSPC
Trigger: GCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCAGAACATAGGTCATaGGGCCTTGCAAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRSEHRS*GLASGS
Trigger: GCTACCGCTTGCAAGGCCGCATGACCTATGTTCTGA...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCGCGGATCCATCTTGTTaGGTCCTTCCACGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRADPSC*VLPRGG
Trigger: CCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGC...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGCCCACCAGGTTAGATaGTGGCTTTCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGAHQVR*WLSGRW
Trigger: CCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACCAGCTGGTAGTAGATaGCATTGCTGGTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSPAGSR*HCWCSH
Trigger: GTGGCTGCACCAGCAATGGCATCTACTACCAGCTGG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAAGCAGCAGCCTGAGCTaGGCGCCCCAAGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQASSSLS*APQDSP
Trigger: CGGGCTGTCTTGGGGCGCCCAGCTCAGGCTGCTGCT...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCTCTTCTGAGTCCACTTaGCCCCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGSSEST*PRRQLG
Trigger: TCCCAACTGCCTCCGGGGCCAAGTGGACTCAGAAGA...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGCAGGTCTTGCATTCTTaGGGTCCAGGAGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPQVLHS*GPGACS
Trigger: GCTACATGCTCCTGGACCCCAAGAATGCAAGACCTG...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACACAAGGAGCAATGCTaGTTGCATCAACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTHKEQC*LHQLPQ
Trigger: CTGTGGCAGTTGATGCAACCAGCATTGCTCCTTGTG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACCCATCCCCGGAAGTCTaGACCCAGTCACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHPSPEV*TQSQKG
Trigger: TCCCTTCTGTGACTGGGTCCAGACTTCCGGGGATGG...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGCAGGGCCCATGCCATaGACGGGTCCATTTTTATGT +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPAGPMP*TGPFLC
Trigger: ACATAAAAATGGACCCGTCCATGGCATGGGCCCTGC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACACTGACTGGCCTGCCTaGGAGAACTCGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADTDWPA*ENSSAS
Trigger: TGAGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGT...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCCAAGGCCATACATGTaGTATGCGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPPRPYM*YANSTQ
Trigger: CTGCGTGGAGTTCGCATACCACATGTATGGCCTTGG...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCGGTACTTGGAGCATGTaGAGACATCACCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRGTWSM*RHHQGC
Trigger: GCAGCCTTGGTGATGTCTCCACATGCTCCAAGTACC...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGTGGCCATTCTTAAGCTaGCACACGGTGTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQWPFLS*HTVCVP
Trigger: TGGGACACACACCGTGTGCCAGCTTAAGAATGGCCA...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGTGGCCATTCTTAAGCTaGCACACGGTGTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRWPFLS*HTVCVP
Trigger: TGGGACACACACCGTGTGCCAGCTTAAGAATGGCCA...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCCGTCCAACTTCAGGTaGTCATTGTCACTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRPSNFR*SLSLLP
Trigger: CGGCAACAGTGACAATGACCACCTGAAGTTGGACGG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTCCTTGTCTCCTGCTaGGCTGCCGTCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQLLVSC*AAVQLQ
Trigger: CTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAG...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTAGGTGCTGCAGCCCCTaGAATCCGCACATATCAAGC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGRCCSP*NPHISS
Trigger: GCTTGATATGTGCGGATTCCAGGGGCTGCAGCACCT...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAAGGTGGTGGTCATGGTaGACATGTGTGTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPRWWSW*TCVCTA
Trigger: TGCTGTGCACACACATGTCCACCATGACCACCACCT...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCCGTCCTGGCAGGTGGTaGTCATGGTGGACATGTGTG +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRRPGRW*SWWTCV
Trigger: CACACATGTCCACCATGACCACCACCTGCCAGGACG...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGACTGCGTCCTGGCAGGTaGTGGTCATGGTGGACATGT +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGLRPGR*WSWWTC
Trigger: ACATGTCCACCATGACCACCACCTGCCAGGACGCAG...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCGCAGGTGTCAGGGCATaGCTTCGCACACAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGAGVRA*LRTQGV
Trigger: TACTCCCTGTGTGCGAAGCCATGCCCTGACACCTGC...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAGCAGGTGTCAGGGCATaGCTTCGCACACAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQAGVRA*LRTQGV
Trigger: TACTCCCTGTGTGCGAAGCCATGCCCTGACACCTGC...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCCCGGAGAATCCTGAATaGCAGGTGTCAGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRPENPE*QVSGHG
Trigger: GCCATGCCCTGACACCTGCCATTCAGGATTCTCCGG...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCTACACCTCCAGGGCTaGCAGCGAATTCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAALHLQG*QRILLL
Trigger: CAACAACAGAATTCGCTGCCAGCCCTGGAGGTGTAG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCCGCGGTTCTCGTTaGTGGCGCTCACAACAAAAT +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRPRGSR*WRSQQN
Trigger: ATTTTGTTGTGAGCGCCACCAACGAGAACCGCGGGG...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGGTAGGGCCACCCGATaGCCATTCAGCATGACCTTA +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRGRATR*PFSMTL
Trigger: TAAGGTCATGCTGAATGGCCATCGGGTGGCCCTACC...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGACCATGCACGCAACTaGCAAAGCTGGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPDHARN*QSWTGE
Trigger: CTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTC...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCTGTGGTGTCGCCCTTaGTCCCACACTGACCATGCA +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDALWCRP*SHTDHA
Trigger: TGCATGGTCAGTGTGGGACCAAGGGCGACACCACAG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGGTTTGCAGGTGCTCTaGAAGCAGGTGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQGLQVL*KQVMLL
Trigger: CAACAACATCACCTGCTTCCAGAGCACCTGCAAACC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGAGAAGGGCAAGGCCATaGCGGGGTGGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRRRARP*RGGTLS
Trigger: TGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCT...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACTCCTGCTGTTCCGCTaGAATCTGCTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPLLLFR*NLLLIY
Trigger: GTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAAGGAGGGAAGGCAGTTaGTGTAGCTGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPRREGS*CSCCRQ
Trigger: CTGCCTACAGCAGCTACACCAACTGCCTTCCCTCCT...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGGGACGGCCATCTTCTaGTTGTTGACCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRGTAIF*LLTTSS
Trigger: GGAGCTTGTGGTCAACAACCAGAAGATGGCCGTCCC...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCCGCAGGTGTTCATTTaGCCTGTAGGGGACGGCCAT +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAPQVFI*PVGDGH
Trigger: ATGGCCGTCCCCTACAGGCCAAATGAACACCTGCGG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGCCCCTCGTACATGCTaGGTAGGGAGATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRAPRTC*VGRSLH
Trigger: ATGCAGTGATCTCCCTACCCAGCATGTACGAGGGGC...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTTCCCTCCTCCTCCGCTaGTATAGCCCTGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPSLLLR*YSPGEA
Trigger: CGCTTCCCCAGGGCTATACCAGCGGAGGAGGAGGGA...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPLLLLS*VLSRAQ
Trigger: CTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAG...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCAGACACGGGCTTTCTaGAAAGCAGCCTTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPQTRAF*KAALGV
Trigger: CACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTGGCTTTCTGGGAGGTaGCGCATCTCGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHWLSGR*RISRLH
Trigger: ATGGAGCCTCGAGATGCGCCACCTCCCAGAAAGCCA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTGGCTTTCTGGGAGGTaGCGCATCTCGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRWLSGR*RISRLH
Trigger: ATGGAGCCTCGAGATGCGCCACCTCCCAGAAAGCCA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGACACCAGGTTAGATGCTaGCTTTCTGGGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGHQVRC*LSGRWR
Trigger: GCGCCACCTCCCAGAAAGCCAGCATCTAACCTGGTG...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGATACTCCCCAAGACTaGAGCATAAATGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPDTPQD*SINVEG
Trigger: GCCCTCCACATTTATGCTTCAGTCTTGGGGAGTATC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGGATACTCCCCAAGACTaGAGCATAAATGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQDTPQD*SINVEG
Trigger: GCCCTCCACATTTATGCTTCAGTCTTGGGGAGTATC...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGATACTCCCCAAGACTaGAGCATAAATGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAADTPQD*SINVEG
Trigger: GCCCTCCACATTTATGCTTCAGTCTTGGGGAGTATC...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCCACGGCTGTGTAATTaGCAGAAACAGCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLPRLCN*QKQPAS
Trigger: ACTGGCAGGCTGTTTCTGTCAATTACACAGCCGTGG...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACCACGGCTGTGTAATTaGCAGAAACAGCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSPRLCN*QKQPAS
Trigger: ACTGGCAGGCTGTTTCTGTCAATTACACAGCCGTGG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAGCCTCCCGTCAAAGGTaGCATAATGAGGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQASRQR*HNEGLR
Trigger: ACGGAGACCCTCATTATGTCACCTTTGACGGGAGGC...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGAAGAATGGGTCTGTTaGGTTGCCACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAEEWVC*VATGLG
Trigger: GCCCAGCCCTGTGGCAACTCAACAGACCCATTCTTC...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGATCACGTGGACGGCTTTaGTGTAGGAGACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGSRGRL*CRRPPG
Trigger: TCCTGGAGGTCTCCTACATCAAAGCCGTCCACGTGA...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCCTCTTCCTCATCATTaGAGTTCCCACACATGCCGC +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGPLPHH*SSHTCR
Trigger: GCGGCATGTGTGGGAACTTCAATGATGAGGAAGAGG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGTCTACCAGGAGACTCTaGCAACTTGGGTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQSTRRL*QLGSMS
Trigger: GGACATTGACCCAAGTTGTCAGAGTCTCCTGGTAGA...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCTACCAGGAGACTCTaGCAACTTGGGTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRSTRRL*QLGSMS
Trigger: GGACATTGACCCAAGTTGTCAGAGTCTCCTGGTAGA...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAAGGACCCTAAGTGGTTaGTCCCAGGGGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLARTLSG*SQGRGE
Trigger: TTCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCT...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTAGGACCCTAAGTGGTTaGTCCCAGGGGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTRTLSG*SQGRGE
Trigger: TTCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACCAGTCTTCATCGTCTaGGGACACTTGGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTPVFIV*GHLGPV
Trigger: GACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGG...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCATGTGGTGGGCAAAGTaGACACAGAGGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCMWWAK*TQRGPC
Trigger: GCAAGGCCCCCTCTGTGTGCACTTTGCCCACCACAT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGATGTCCAGGTAGGCAGTaGTACCCCGTGTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGCPGRQ*YPVFPQ
Trigger: TTGAGGGAACACGGGGTAGCACTGCCTACCTGGACA...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATGTCCAGGTAGGCAGTaGTACCCCGTGTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTCPGRQ*YPVFPQ
Trigger: TTGAGGGAACACGGGGTAGCACTGCCTACCTGGACA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCATTTCTGCCCAGGTCTTaGATTCTTGGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPFLPRS*ILGVQE
Trigger: CTCCTGGACCCCAAGAATGCAAGACCTGGGCAGAAA...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTGCTGGTTGCATCAACTaGCACAGCTGGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTAGCIN*HSWLWG
Trigger: ACCCCAGAGCCAGCTGTGGCAGTTGATGCAACCAGC...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGCTGGTTGCATCAACTaGCACAGCTGGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCAGCIN*HSWLWG
Trigger: ACCCCAGAGCCAGCTGTGGCAGTTGATGCAACCAGC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAAGGAGCAATGCTGGTTaGATCAACTGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSRSNAG*INCHSW
Trigger: CCAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCT...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGGCCATACATGTGGTATaGGAACTCCACGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQAIHVV*ELHADV
Trigger: GACATCTGCGTGGAGTTCGCATACCACATGTATGGC...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACACGCCTTCCTGTCCCTaGTCCTCATTCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADTPSCP*SSFLAV
Trigger: GACAGCCAAGAATGAGGAGCAGGGACAGGAAGGCGT...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCACAAACCGCCCGCTTaGACCCAGGAAGACGCCTTT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIHKPPA*TQEDAF
Trigger: AAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCACAAACCGCCCGCTTaGACCCAGGAAGACGCCTTT +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSHKPPA*TQEDAF
Trigger: AAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTG...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCAAACCGAACTCCGTCTaGAGCTCCACAAACCGCCCG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLKPNSV*SSTNRP
Trigger: CGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTT...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCTGTCTCCTGCTGGGCTaGCGTCCAACTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCCLLLG*RPTSGG
Trigger: ACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACA...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACTCCTCCTTGTCTCCTaGTGGGCTGCCGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLALLLVS*WAAVQL
Trigger: AAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGTGCACAGCAGGTGCTaGAGCCCCTGGAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSVHSRC*SPWNPH
Trigger: GTGCGGATTCCAGGGGCTGCAGCACCTGCTGTGCAC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCATGGTGGACATGTGTGTaGACAGCAGGTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAWWTCV*TAGAAA
Trigger: GGCTGCAGCACCTGCTGTGCACACACATGTCCACCA...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGAGACGCACAACTCTTTaGAGCCTGGCTTGTACCACC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTRRTTL*SLACTT
Trigger: GGTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCT...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAGGTCACCCGAGGCTGTaGAGGTGGCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPGHPRL*RWRHLG
Trigger: CCCAAGGTGCCGCCACCTGCACAGCCTCGGGTGACC...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCTTGTTCCAGGCGTCTaGCATGCTGTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDALVPGV*HAVLLA
Trigger: TGCCAGGAGAACAGCATGGCAGACGCCTGGAACAAG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGTCGGGTTGTTTATGCTaGTGCAGGTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLSGCLC*CRCLGR
Trigger: CCTGCCCAGACACCTGCAGCAGCATAAACAACCCGA...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAATATCTGGTTGGGTTTaGAGGTGCTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPISGWV*RCSGSR
Trigger: CCTGCTTCCAGAGCACCTGCAAACCCAACCAGATAT...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCCTTCCTCCTTCTCATaGTTGGCACTGATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQPSSFS*LALILK
Trigger: CTTCAAGATCAGTGCCAAGCATGAGAAGGAGGAAGG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTTGTTCCGCTGGAATCTaGTGCTCATCTACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAACSAGI*CSSTRR
Trigger: TCTCCTGGTAGATGAGCAGCAGATTCCAGCGGAACA...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACCACTCGGGTTCTCCTaGTGTTCCGCTGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTPLGFS*CSAGIC
Trigger: GCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAAGGAGCCCGGAGCGCTaGCTCGCACTTTTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPRSPER*LALFPR
Trigger: GCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCT...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTAGACACACTTCTCCGTaGAACCGCTGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIRHTSP*NRWRPS
Trigger: GCTGGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCT...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCGCCCACCAGGTTAGATaGTGGCTTTCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSAHQVR*WLSGRW
Trigger: CCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGC...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGCTGGCCTCCTTAGCTTaGCATCCTTCCAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRLASLA*HPSKDA
Trigger: GGCATCCTTGGAAGGATGCCAAGCTAAGGAGGCCAG...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACGGGGAAGGGCACAGTTaGGAGCCTGGACTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHGEGHS*EPGLLL
Trigger: TAAAAGGAGTCCAGGCTCCCAACTGTGCCCTTCCCC...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTGGGAGAGGGCCCACTaGCTCGAACCCAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIWERAH*LEPSLH
Trigger: ATGAAGACTGGGTTCGAGCCAGTGGGCCCTCTCCCA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACGCCACTCCCCCACGGTaGAAGCTGTTCGATTCCATA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADATPPR*KLFDSI
Trigger: TATGGAATCGAACAGCTTCCACCGTGGGGGAGTGGC...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGCCACTCCCCCACGGTaGAAGCTGTTCGATTCCATA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRATPPR*KLFDSI
Trigger: TATGGAATCGAACAGCTTCCACCGTGGGGGAGTGGC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAAGCAGCAGCCTGAGCTaGGCGCCCCAAGACAGCCCG +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPSSSLS*APQDSP
Trigger: CGGGCTGTCTTGGGGCGCCCAGCTCAGGCTGCTGCT...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACATGCCACAGCTGGCTCTaGGGTCTTTCCAAAAACGCC +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTCHSWL*GLSKNA
Trigger: GGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCA...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCACTGACTGGCCTGCCTaGGAGAACTCGTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCTDWPA*ENSSAS
Trigger: TGAGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAACCAGTCTGACTGACTaGCCTGCCTGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTTSLTD*PAWENS
Trigger: CGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGT...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACTTCGTAGCGGGCATTTaGAGGGCAGCGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADFVAGI*RAALCT
Trigger: AGTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAA...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGTAACATACAGCTGCTaGTCACCATCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPVTYSC*SPSHLT
Trigger: GGTGAGATGGGATGGTGACCAGCAGCTGTATGTTAC...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGGTAACATACAGCTGCTaGTCACCATCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: SPALQLKGSHSRIRELAQVTYSC*SPSHLT
Trigger: GGTGAGATGGGATGGTGACCAGCAGCTGTATGTTAC...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCCTTGTCTCCTGCTaGGCTGCCGTCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTLLVSC*AAVQLQ
Trigger: CTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACAGGCATGTCTCAAATaGGCCATGAGTGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPQACLK*AMSVDQ
Trigger: CTGGTCGACACTCATGGCCCATTTGAGACATGCCTG...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCTGCGTCCTGGCAGGTaGTGGTCATGGTGGACATGT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCLRPGR*WSWWTC
Trigger: ACATGTCCACCATGACCACCACCTGCCAGGACGCAG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGGGCGGGCAGGCCATTaGGCAGAAGTGGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAGRAGH*AEVGFP
Trigger: AGGGAACCCCACTTCTGCCCAATGGCCTGCCCGCCC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGGGCGGGCAGGCCATTaGGCAGAAGTGGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGGRAGH*AEVGFP
Trigger: AGGGAACCCCACTTCTGCCCAATGGCCTGCCCGCCC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGACCATGCACGCAACTaGCAAAGCTGGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLADHARN*QSWTGE
Trigger: CTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTC...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGTAGCTGCTGCCAGGTaGGCACCTCATAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTVAAAR*APHRAE
Trigger: TTCTGCCCTATGAGGTGCCCACCTGGCAGCAGCTAC...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACAGCAGGTGCAGAGCCTaGTGCAGGTGTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADSRCRA*CRCSLC
Trigger: ACACAGAGAACACCTGCACCAGGCTCTGCACCTGCT...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGGTTTGCAGGTGCTCTaGAAGCAGGTGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRGLQVL*KQVMLL
Trigger: CAACAACATCACCTGCTTCCAGAGCACCTGCAAACC...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAGCATATCTGGTTaGGTTTGCAGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTPSISG*VCRCSG
Trigger: TCCAGAGCACCTGCAAACCCAACCAGATATGCTGGG...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAAGGGCCCAGCATATCTaGTTGGGTTTGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGRAQHI*LGLQVL
Trigger: GAGCACCTGCAAACCCAACCAGATATGCTGGGCCCT...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAATGCGGGAGGCGCACTaGGCCCACACAGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVMREAH*AHTGAR
Trigger: CCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCAT...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCATCTTGCCCAGAGGGATaGAGCCACCATGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLASCPEG*SHHGHP
Trigger: AGGATGCCCATGGTGGCTCCATCCCTCTGGGCAAGA...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCAGAAGATGGAGCTCCTaGGCGGATCCATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRRRWSS*ADPSCC
Trigger: GCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCT...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCCTTCCTGCAAGAAGATaGAGCTCCTGGGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGLPARR*SSWADP
Trigger: TGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAG...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACCGCAGGTGTTCATTTaGCCTGTAGGGGACGGCCAT +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAPQVFI*PVGDGH
Trigger: ATGGCCGTCCCCTACAGGCCAAATGAACACCTGCGG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCCGCAGGTGTTCATTTaGCCTGTAGGGGACGGCCAT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIPQVFI*PVGDGH
Trigger: ATGGCCGTCCCCTACAGGCCAAATGAACACCTGCGG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGGCCCCTCGTACATGCTaGGTAGGGAGATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRAPRTC*VGRSLH
Trigger: ATGCAGTGATCTCCCTACCCAGCATGTACGAGGGGC...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTGGGTCAGGGCGCCACTaGGCAGCATCATGTCATTCT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTGSGRH*AASCHS
Trigger: AGAATGACATGATGCTGCCCAGTGGCGCCCTGACCC...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACCTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHLLLLS*VLSRAQ
Trigger: CTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAG...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCACCAGGTTAGATGCTaGCTTTCTGGGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIHQVRC*LSGRWR
Trigger: GCGCCACCTCCCAGAAAGCCAGCATCTAACCTGGTG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGTGTAAATGCACTCTCTaGTCACGGCCAGTAGTACGA +
Preference number: 4 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRCKCTL*SRPVVR
Trigger: TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACA...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGGAGAGTAACTTGCTaGCCCCCAACCAGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFGRVTC*PPTRVR
Trigger: ACGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGGTACGTCCACAGTCTTaGTCAGAACATAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREVRPQS*SEHRSC
Trigger: GCATGACCTATGTTCTGATCAAGACTGTGGACGTAC...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACCATCTTCTGGTTGTTaGCCACAAGCTCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQPSSGC*PQAPDQ
Trigger: CTGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGG...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTCCTTCCACCAAAGCTaGCGACCAGCTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLSFHQS*RPAQSR
Trigger: CCGACTTTGAGCTGGTCGTCAGCTTTGGTGGAAGGA...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACTTCACACTCGCAGGTaGAGGTGGCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQALHTRR*RWLPAP
Trigger: GGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAG...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTTTTCTGCCCAGGTCTTaGATTCTTGGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAFLPRS*ILGVQE
Trigger: CTCCTGGACCCCAAGAATGCAAGACCTGGGCAGAAA...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTTGACAGAAACAGCCTaGCAGTTGGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRLTETA*QLGPGC
Trigger: ACAACCTGGGCCCAACTGGCAGGCTGTTTCTGTCAA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGGAGCAATGCTGGTTaGATCAACTGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHRSNAG*INCHSW
Trigger: CCAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCT...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGCCATACATGTGGTATaGGAACTCCACGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTAIHVV*ELHADV
Trigger: GACATCTGCGTGGAGTTCGCATACCACATGTATGGC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTGGGGCTGAACCACTCTaGCCCAGGCTCATAGTAGTC +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVGAEPL*PRLIVV
Trigger: GACTACTATGAGCCTGGGGCAGAGTGGTTCAGCCCC...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGGGCTGAACCACTCTaGCCCAGGCTCATAGTAGTC +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFGAEPL*PRLIVV
Trigger: GACTACTATGAGCCTGGGGCAGAGTGGTTCAGCCCC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGCCCATGAAGCCAAAGTaGCTCCCGTCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRPMKPK*LPSKVT
Trigger: TGTCACCTTTGACGGGAGGCACTTTGGCTTCATGGG...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACCCATGAAGCCAAAGTaGCTCCCGTCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTPMKPK*LPSKVT
Trigger: TGTCACCTTTGACGGGAGGCACTTTGGCTTCATGGG...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTGGGTCACGTAGACTTTaGTCAGGCAGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTGSRRL*SGRTRL
Trigger: AAGGCGTGTCCTGCCTGAGCAAAGTCTACGTGACCC...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGGGTCACGTAGACTTTaGTCAGGCAGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTGSRRL*SGRTRL
Trigger: AAGGCGTGTCCTGCCTGAGCAAAGTCTACGTGACCC...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGACAGTAACATACAGCTaGTGGTCACCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRTVTYS*WSPSHL
Trigger: GAGATGGGATGGTGACCAGCAGCTGTATGTTACTGT...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTCTCCTCCTTGTCTCCTaGTGGGCTGCCGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFLLLVS*WAAVQL
Trigger: AAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAG...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTGGCCCCGACATGCTaGTCTGCAGAGATGAATCAC +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTLAPTC*SAEMNH
Trigger: GTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGGTCACCCGAGGCTGTaGAGGTGGCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVGHPRL*RWRHLG
Trigger: CCCAAGGTGCCGCCACCTGCACAGCCTCGGGTGACC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTTGTTCCAGGCGTCTaGCATGCTGTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTLVPGV*HAVLLA
Trigger: TGCCAGGAGAACAGCATGGCAGACGCCTGGAACAAG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCCTTCCTCCTTCTCATaGTTGGCACTGATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VQTSPALQLKGSHSRIREPSSFS*LALILK
Trigger: CTTCAAGATCAGTGCCAAGCATGAGAAGGAGGAAGG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTCCACTCGGGTTCTCCTaGTGTTCCGCTGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPPLGFS*CSAGIC
Trigger: GCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGG...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTCACAGAGGGTGTTTaGACAGTCCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTLTEGV*TVHQEG
Trigger: CCCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGGCAGTTGGTGTAGCTaGTGTAGGCAGGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLGSWCS*CRQGIP
Trigger: TGGAATGCCCTGCCTACAGCAGCTACACCAACTGCC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACAAGCCCCTCGTACATaGTGGGTAGGGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAQAPRT*WVGRSL
Trigger: CAGTGATCTCCCTACCCAGCATGTACGAGGGGCTTG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGCATCATGTCATTCTTaGGGTTCTTGTCGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGASCHS*GSCRSF
Trigger: GAAACTACGACAAGAACCGCAAGAATGACATGATGC...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTCTGTTGCTCGCCAGCTaGTCCGGGCTACATTCGGAC +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSLLLAS*SGLHSD
Trigger: GTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAG...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTGAAGGTGGCTCCCTaGTCCCGACACTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPVKVAP*SRHCPS
Trigger: TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCAC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCTGGCCTCCTTAGCTTaGCATCCTTCCAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCLASLA*HPSKDA
Trigger: GGCATCCTTGGAAGGATGCCAAGCTAAGGAGGCCAG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTCATGAGGACCCTAAGTaGTTGCTCCCAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVHEDPK*LLPGER
Trigger: CCTCTCCCCTGGGAGCAACCACTTAGGGTCCTCATG...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAGTCACAGAGGGGTTTaGCGTCATCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPSHRGV*RHPQNH
Trigger: GTGATTTTGAGGATGACGCCAAACCCCTCTGTGACT...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCAGTCACAGAGGGGTTTaGCGTCATCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRSHRGV*RHPQNH
Trigger: GTGATTTTGAGGATGACGCCAAACCCCTCTGTGACT...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGGCCCCGGAGGCAGTTaGGATCCAGGTCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPGPGGS*DPGPVT
Trigger: TGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTGCCACAGCTGGCTCTaGGGTCTTTCCAAAAACGCC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVICHSWL*GLSKNA
Trigger: GGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAATCAACTGCCACAGCTaGCTCTGGGGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSINCHS*LWGLSK
Trigger: TTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGAT...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTCACAAGGAGCAATGCTaGTTGCATCAACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGHKEQC*LHQLPQ
Trigger: CTGTGGCAGTTGATGCAACCAGCATTGCTCCTTGTG...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGCCAAGGCCATACATGTaGTATGCGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRPRPYM*YANSTQ
Trigger: CTGCGTGGAGTTCGCATACCACATGTATGGCCTTGG...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGGTCATAGGGGTACTTaGAGCATGTGGAGACATCAC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPGHRGT*SMWRHH
Trigger: GTGATGTCTCCACATGCTCCAAGTACCCCTATGACC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAGGTCATAGGGGTACTTaGAGCATGTGGAGACATCAC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSGHRGT*SMWRHH
Trigger: GTGATGTCTCCACATGCTCCAAGTACCCCTATGACC...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTTCGTAGCGGGCATTTaGAGGGCAGCGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIFVAGI*RAALCT
Trigger: AGTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTTGGCCATTCTTAAGCTaGCACACGGTGTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAWPFLS*HTVCVP
Trigger: TGGGACACACACCGTGTGCCAGCTTAAGAATGGCCA...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAGGGTGGCATCCATACTaGCCATTCTTAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQGWHPY*PFLSWH
Trigger: GTGCCAGCTTAAGAATGGCCAGTATGGATGCCACCC...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGTAACATACAGCTGCTaGTCACCATCCCATCTCACC +
Preference number: 4 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPVTYSC*SPSHLT
Trigger: GGTGAGATGGGATGGTGACCAGCAGCTGTATGTTAC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGACAGGCATGTCTCAAATaGGCCATGAGTGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGQACLK*AMSVDQ
Trigger: CTGGTCGACACTCATGGCCCATTTGAGACATGCCTG...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTAGGTGCTGCAGCCCCTaGAATCCGCACATATCAAGC +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTRCCSP*NPHISS
Trigger: GCTTGATATGTGCGGATTCCAGGGGCTGCAGCACCT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCAGGTGCTGCAGCCCCTaGAATCCGCACATATCAAGC +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCRCCSP*NPHISS
Trigger: GCTTGATATGTGCGGATTCCAGGGGCTGCAGCACCT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGGGAGTACTTGCTGTTaGGCGGGCAGGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGGSTCC*AGRPLG
Trigger: GCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCTACACCTCCAGGGCTaGCAGCGAATTCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPLHLQG*QRILLL
Trigger: CAACAACAGAATTCGCTGCCAGCCCTGGAGGTGTAG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCATGGCCACAGAACTCCTaGGCCCTACACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAWPQNS*ALHLQG
Trigger: GCCCTGGAGGTGTAGGGCCCAGGAGTTCTGTGGCCA...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTCAGGTGCCCATGAAGTaGTGCAAGGCGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVQVPMK*CKAPSK
Trigger: CTTCGATGGCGCCTTGCACCACTTCATGGGCACCTG...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGTTCTCCTGGCAGCTaGAGGGCTTGCCACCCACAA +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVCSPGS*RACHPQ
Trigger: TTGTGGGTGGCAAGCCCTCCAGCTGCCAGGAGAACA...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTGACCATGCACGCAACTaGCAAAGCTGGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVDHARN*QSWTGE
Trigger: CTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTC...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCACAGGGCAGTGCTTTaGGGCAGTCCCTCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSHRAVL*GSPSGC
Trigger: ACAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTG...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCAGGCAGAGGGGACTTTaGCGCCCTCACACCGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGRQRGL*RPHTGH
Trigger: ATGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCAAGCCACACTGACTTCTaGGGACACACTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPSHTDF*GHTCLH
Trigger: GTGAAGACAAGTGTGTCCCCAGAAGTCAGTGTGGCT...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTCTCCGTGCAACCGCTaGAGACCCAGCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSSPCNR*RPSSCP
Trigger: TGGGCAAGAGCTGGGTCTCCAGCGGTTGCACGGAGA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCAGAAGATGGAGCTCCTaGGCGGATCCATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPRRWSS*ADPSCC
Trigger: GCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCT...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTTCCTGCAAGAAGATaGAGCTCCTGGGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVILPARR*SSWADP
Trigger: TGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTLLLLS*VLSRAQ
Trigger: CTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAG...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGAGTAGATGCCATTGCTaGTGCAGCCACAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRSRCHC*CSHSQP
Trigger: TGGCTGACTGTGGCTGCACCAGCAATGGCATCTACT...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR TCA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGTCTTCAAAGTCACACTaGGGAAAACCCTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTSSKSH*GKPSPQ
Trigger: TTGTGGGGAGGGTTTTCCTCAGTGTGACTTTGAAGA...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCTCTTGGCTGTCACCCTaGAGAATGGGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGSWLSP*RMGLLS
Trigger: ACTCAACAGACCCATTCTTCAGGGTGACAGCCAAGA...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCACAGCCTCTGAGCAGTaGGATGCTGAGGTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCTASEQ*DAEVKD
Trigger: GTCTTTGACCTCAGCATCTCACTGCTCAGAGGCTGT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAACACACTCCCACACCTaGGGCCCGACAATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQATHSHT*GPTMEQ
Trigger: CTGCTCCATTGTCGGGCCTCAGGTGTGGGAGTGTGT...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGGCCCTTCTGCAGGGTaGCCTGGGCATCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAGPSAG*PGHRRC
Trigger: ACATCTACGATGCCCAGGTCACCCTGCAGAAGGGCC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCGTACGTCCACAGTCTTaGTCAGAACATAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGVRPQS*SEHRSC
Trigger: GCATGACCTATGTTCTGATCAAGACTGTGGACGTAC...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGCACAGGTGCACCGCTaGGAGCAGTCCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPAQVHR*EQSSVR
Trigger: TCTGACTGAGGACTGCTCTCAGCGGTGCACCTGTGC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACCCCCGCTCTGCAGCTaGAGGGCTCACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVPPLCS*RAHTAG
Trigger: TCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAAGGAGGACAGCTTTCTaGCCAGGTCTTGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQRRTAF*PGLAFL
Trigger: CAAGAATGCAAGACCTGGGCAGAAAGCTGTCCTCCT...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAGGAGGACAGCTTTCTaGCCAGGTCTTGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLRRTAF*PGLAFL
Trigger: CAAGAATGCAAGACCTGGGCAGAAAGCTGTCCTCCT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTAGGAGCAATGCTGGTTaGATCAACTGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIRSNAG*INCHSW
Trigger: CCAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCT...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAAGACATCACCAAGGCTaGCAGCCCAGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQARHHQG*QPSGCG
Trigger: CCCACAGCCACTGGGCTGGCAGCCTTGGTGATGTCT...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCACCCATGAAGCCAAAGTaGCTCCCGTCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: RISRLHTQASPVTNFTLAPMKPK*LPSKVT
Trigger: TGTCACCTTTGACGGGAGGCACTTTGGCTTCATGGG...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAACAGTAACATACAGCTaGTGGTCACCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSTVTYS*WSPSHL
Trigger: GAGATGGGATGGTGACCAGCAGCTGTATGTTACTGT...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTGAAGCGGCCTTCACGTaGAGCAGGCATGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIEAAFT*SRHVSN
Trigger: ATTTGAGACATGCCTGCTGCACGTGAAGGCCGCTTC...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACTGTTCCGCTGGAATCTaGTGCTCATCTACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QTRAFWKAALGVVPQGADCSAGI*CSSTRR
Trigger: TCTCCTGGTAGATGAGCAGCAGATTCCAGCGGAACA...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGTCTGAGACACAATTaGTGTTGCTGTTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRCLRHN*CCCCRK
Trigger: CTTCCGACAACAGCAACAGCAATTGTGTCTCAGACA...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTCCTCGTTCTGTAAATaGACTCTCTGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRSSFCK*TLWSRP
Trigger: TGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTTCGTCTGCGGACACTTaGGACCAGTCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSSSADT*DQSQRG
Trigger: ACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGA...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTAAACAGCCTGCCAGTTaGGCCCAGGTTGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFKQPAS*AQVVLR
Trigger: TCTCAGGACAACCTGGGCCCAACTGGCAGGCTGTTT...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAATCAACTGCCACAGCTaGCTCTGGGGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTINCHS*LWGLSK
Trigger: TTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGAT...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCCAGTCACAGAAGGGATaGGCGTTGTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGQSQKG*ALSSKS
Trigger: TGACTTTGAAGACAACGCCCATCCCTTCTGTGACTG...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCCAAGGCCATACATGTaGTATGCGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCPRPYM*YANSTQ
Trigger: CTGCGTGGAGTTCGCATACCACATGTATGGCCTTGG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAAGCTGCATGGGCTGTTaGTGTCCTGAGGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPSCMGC*CPEGTV
Trigger: CACCGTCCCCTCAGGACACCAACAGCCCATGCAGCT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCGCCAGTGGAAGAAACTaGAGATACGGGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSASGRN*RYGRKL
Trigger: GAGCTTCCTCCCGTATCTCCAGTTTCTTCCACTGGC...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAGGTCATAGGGGTACTTaGAGCATGTGGAGACATCAC +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTGHRGT*SMWRHH
Trigger: GTGATGTCTCCACATGCTCCAAGTACCCCTATGACC...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGGGTGGCATCCATACTaGCCATTCTTAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLGWHPY*PFLSWH
Trigger: GTGCCAGCTTAAGAATGGCCAGTATGGATGCCACCC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCAGGCATGTCTCAAATaGGCCATGAGTGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIQACLK*AMSVDQ
Trigger: CTGGTCGACACTCATGGCCCATTTGAGACATGCCTG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTACACCTCCAGGGCTaGCAGCGAATTCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVILHLQG*QRILLL
Trigger: CAACAACAGAATTCGCTGCCAGCCCTGGAGGTGTAG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGTAGGGCCACCCGATaGCCATTCAGCATGACCTTA +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFGRATR*PFSMTL
Trigger: TAAGGTCATGCTGAATGGCCATCGGGTGGCCCTACC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTTGTTCTCCTGGCAGCTaGAGGGCTTGCCACCCACAA +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSCSPGS*RACHPQ
Trigger: TTGTGGGTGGCAAGCCCTCCAGCTGCCAGGAGAACA...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCCCAGCATATCTGGTTaGGTTTGCAGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIPSISG*VCRCSG
Trigger: TCCAGAGCACCTGCAAACCCAACCAGATATGCTGGG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACCTGGCTCTGGCAGGTaGCCCCGAAGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVPGSGR*PRRLAE
Trigger: CTCTGCAAGCCTTCGGGGCCACCTGCCAGAGCCAGG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAAGCCACACTGACTTCTaGGGACACACTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQSHTDF*GHTCLH
Trigger: GTGAAGACAAGTGTGTCCCCAGAAGTCAGTGTGGCT...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCATCTCCGTGCAACCGCTaGAGACCCAGCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPSPCNR*RPSSCP
Trigger: TGGGCAAGAGCTGGGTCTCCAGCGGTTGCACGGAGA...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTGGGTCAGGGCGCCACTaGGCAGCATCATGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSGSGRH*AASCHS
Trigger: AGAATGACATGATGCTGCCCAGTGGCGCCCTGACCC...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCTGTAAATGCACTCTCTaGTCACGGCCAGTAGTACGA +
Preference number: 4 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRCKCTL*SRPVVR
Trigger: TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACA...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTACAGCTCTGATATATaGTACCTGCTGGACACTCCA +
Preference number: 4 (lower is better)
Translates to: AFWKAALGVVPQGADLPRYSSDI*YLLDTP
Trigger: TGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTA...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR TCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGAGGCTTCTCTTTCCTaGAAAGGGCAGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGEASLS*KGQPPP
Trigger: TGGTGGGGGCTGCCCTTTTCAGGAAAGAGAAGCCTC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTCTTCAAAGTCACACTaGGGAAAACCCTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHSSKSH*GKPSPQ
Trigger: TTGTGGGGAGGGTTTTCCTCAGTGTGACTTTGAAGA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAATGGGCTTTTCTGTGGTaGCACTGGGTTTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQWAFLW*HWVFLW
Trigger: CCATAGAAAAACCCAGTGTCACCACAGAAAAGCCCA...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGTGTGTGTCCCACACTaGGAGATCTGGCACTCGACC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAVCVPH*EIWHST
Trigger: GGTCGAGTGCCAGATCTCTCAGTGTGGGACACACAC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTAAGTGCACTTGCCCATaGAGCCAAAGTGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSKCTCP*SQSASR
Trigger: ACGGGAGGCACTTTGGCTTCATGGGCAAGTGCACTT...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTTCTTGGCTGTCACCCTaGAGAATGGGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTSWLSP*RMGLLS
Trigger: ACTCAACAGACCCATTCTTCAGGGTGACAGCCAAGA...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAAGATGTGGCCTTTCTaGCATTCACAGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLKMWPF*HSQLSA
Trigger: TGCTGAGAGCTGTGAATGTCAGAAAGGCCACATCTT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGTTTAATCTTCTTGTCTaGAGACAGCTCAAAACTGAG +
Preference number: 4 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGFNLLV*RQLKTE
Trigger: CTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAAA...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTCAAAGCTGCATGTTTaGATCATACAGACGCGATTA +
Preference number: 4 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPSKLHV*IIQTRL
Trigger: TAATCGCGTCTGTATGATGCAAACATGCAGCTTTGA...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTGCCATACATGTGGTATaGGAACTCCACGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIAIHVV*ELHADV
Trigger: GACATCTGCGTGGAGTTCGCATACCACATGTATGGC...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTACAAAAAGCCAGGGTTaGAGACACAGCCCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSTKSQG*RHSPPD
Trigger: GTCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGT...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTACGCCTTCCTGTCCCTaGTCCTCATTCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSTPSCP*SSFLAV
Trigger: GACAGCCAAGAATGAGGAGCAGGGACAGGAAGGCGT...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAAAACCGAACTCCGTCTaGAGCTCCACAAACCGCCCG +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPKPNSV*SSTNRP
Trigger: CGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAACAGTAACATACAGCTaGTGGTCACCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGTVTYS*WSPSHL
Trigger: GAGATGGGATGGTGACCAGCAGCTGTATGTTACTGT...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCACTCCTCCTTGTCTCCTaGTGGGCTGCCGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPLLLVS*WAAVQL
Trigger: AAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAG...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTCGCACATATCAAGCATaGAGCTGTCGAAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDARTYQA*SCRRRK
Trigger: CTTCCTTCTTCGACAGCTGCATGCTTGATATGTGCG...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCGCACATATCAAGCATaGAGCTGTCGAAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPRTYQA*SCRRRK
Trigger: CTTCCTTCTTCGACAGCTGCATGCTTGATATGTGCG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAGGACGAAGCCCGGATTaGATTCACAGGCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRGRSPD*IHRPPR
Trigger: GCGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCC...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTAGGTGCAGAGCCTGGTaGAGGTGTTCTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSRCRAW*RCSLCT
Trigger: GGTACACAGAGAACACCTGCACCAGGCTCTGCACCT...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTATATCTGGTTGGGTTTaGAGGTGCTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIISGWV*RCSGSR
Trigger: CCTGCTTCCAGAGCACCTGCAAACCCAACCAGATAT...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACACTTTTCCCGCGCCCTaGGGAGGTCGGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNTFPAP*GGRPPC
Trigger: GCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGT...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTGGCAGTTGGTGTAGCTaGTGTAGGCAGGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSGSWCS*CRQGIP
Trigger: TGGAATGCCCTGCCTACAGCAGCTACACCAACTGCC...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCTCCTCGTTCTGTAAATaGACTCTCTGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCSSFCK*TLWSRP
Trigger: TGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGA...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGATATATGGTACCTaGTGGACACTCCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVILIYGT*WTLHGA
Trigger: TGCGCCATGGAGTGTCCAGCAGGTACCATATATCAG...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCACATGAGGACCCTAAGTaGTTGCTCCCAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPHEDPK*LLPGER
Trigger: CCTCTCCCCTGGGAGCAACCACTTAGGGTCCTCATG...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGTCACAGAGGGGTTTaGCGTCATCCTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRSHRGV*RHPQNH
Trigger: GTGATTTTGAGGATGACGCCAAACCCCTCTGTGACT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCTCGTCTGCGGACACTTaGGACCAGTCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGSSADT*DQSQRG
Trigger: ACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGA...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGCCACTCCCCCACGGTaGAAGCTGTTCGATTCCATA +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSATPPR*KLFDSI
Trigger: TATGGAATCGAACAGCTTCCACCGTGGGGGAGTGGC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCGTCACAGAGGTCATTTaGAATGTCAAAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPVTEVI*NVKAAC
Trigger: ACATGCAGCTTTGACATTCCAAATGACCTCTGTGAC...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGACAGTCACAGAAGGGATaGGCGTTGTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGQSQKG*ALSSKS
Trigger: TGACTTTGAAGACAACGCCCATCCCTTCTGTGACTG...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCGTCCTGGCAGGTGGTaGTCATGGTGGACATGTGTG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGRPGRW*SWWTCV
Trigger: CACACATGTCCACCATGACCACCACCTGCCAGGACG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACAGGTGCCCATGAAGTaGTGCAAGGCGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAQVPMK*CKAPSK
Trigger: CTTCGATGGCGCCTTGCACCACTTCATGGGCACCTG...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTAGCTGCTGCCAGGTaGGCACCTCATAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPVAAAR*APHRAE
Trigger: TTCTGCCCTATGAGGTGCCCACCTGGCAGCAGCTAC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGTGGTAGGAGCCCGCTaGGTCAGTGCAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVVVGAR*VSAATL
Trigger: CAGTGTGGCTGCACTGACCCAGCGGGCTCCTACCAC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCGGTTTGCAGGTGCTCTaGAAGCAGGTGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSGLQVL*KQVMLL
Trigger: CAACAACATCACCTGCTTCCAGAGCACCTGCAAACC...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTTGATTAGCACACGGTaGCCCTTCTGCAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSLISTR*PFCRVT
Trigger: GGTCACCCTGCAGAAGGGCCACCGTGTGCTAATCAA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCAGCCACACTGACTTCTaGGGACACACTTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSSHTDF*GHTCLH
Trigger: GTGAAGACAAGTGTGTCCCCAGAAGTCAGTGTGGCT...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGAAGTGAGCTGGCAGTaGGACCCAGAGGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVEVSWQ*DPEGHR
Trigger: CCGATGCCCCTCTGGGTCCCACTGCCAGCTCACTTC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACTCTTGGAAGGGCTCTaGGGCCACCGTCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPLLEGL*GHRLVT
Trigger: TGTCACCAGACGGTGGCCCCAGAGCCCTTCCAAGAG...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPKQPWV*FPRVQT
Trigger: GGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTT...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAGAAGAATGGGTCTGTTaGGTTGCCACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVREEWVC*VATGLG
Trigger: GCCCAGCCCTGTGGCAACTCAACAGACCCATTCTTC...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTTCTTGGCTGTCACCCTaGAGAATGGGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPSWLSP*RMGLLS
Trigger: ACTCAACAGACCCATTCTTCAGGGTGACAGCCAAGA...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTACAGCCTCTGAGCAGTaGGATGCTGAGGTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSTASEQ*DAEVKD
Trigger: GTCTTTGACCTCAGCATCTCACTGCTCAGAGGCTGT...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCATGCTCTGGAAGCAGGTaGTGTTGTTGTGGACGGAGC +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPCSGSR*CCCGRS
Trigger: GCTCCGTCCACAACAACATCACCTGCTTCCAGAGCA...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGACTCCCCTGGGAGCTaGCACACTCCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPADSPGS*HTPTPE
Trigger: CTCAGGTGTGGGAGTGTGTCAGCTCCCAGGGGAGTC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGGCCCTTCTGCAGGGTaGCCTGGGCATCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVGPSAG*PGHRRC
Trigger: ACATCTACGATGCCCAGGTCACCCTGCAGAAGGGCC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGGGGTCGCCATAGACTaGGCATTGTTCAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSGVAID*ALFRLV
Trigger: GACAAGTCTGAACAATGCTCAGTCTATGGCGACCCC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGTTGGCCCCACAGGGTaGCCCGCAGGTGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVVGPTG*PAGVHL
Trigger: CAAATGAACACCTGCGGGTCACCCTGTGGGGCCAAC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACCAGCTCAAAGTCGGTaGCCAGGTAGAGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVPAQSR*PGRAVG
Trigger: GCCAACGGCTCTACCTGGTCACCGACTTTGAGCTGG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCATGTTGCCAAAGGTGTTaGGGTTCTGGGTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPCCQRC*GSGSGR
Trigger: GCGCCCTGACCCAGAACCTCAACACCTTTGGCAACA...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGGATGGCGTACCCACTaGGGACCTGGCAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAGWRTH*GPGNAA
Trigger: AGCTGCGTTGCCAGGTCCTCAGTGGGTACGCCATCC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538115.5
ENST00000542585.5
CDS-3UTR GCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAATGTGGTGGGCAAAGTaGACACAGAGGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRMWWAK*TQRGPC
Trigger: GCAAGGCCCCCTCTGTGTGCACTTTGCCCACCACAT...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAACAAACCACAGAGTTTaGCAGAGTATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQTNHRV*QSMCWT
Trigger: TGTCCAGCACATACTCTGGCAAACTCTGTGGTTTGT...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAACAAACCACAGAGTTTaGCAGAGTATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGTNHRV*QSMCWT
Trigger: TGTCCAGCACATACTCTGGCAAACTCTGTGGTTTGT...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACGCACATATCAAGCATaGAGCTGTCGAAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTRTYQA*SCRRRK
Trigger: CTTCCTTCTTCGACAGCTGCATGCTTGATATGTGCG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCCTCGGGTTGTTTATaGTGCTGCAGGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRPSGCL*CCRCLG
Trigger: GCCCAGACACCTGCAGCAGCATAAACAACCCGAGGG...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCCCTTCCTCCTTCTCATaGTTGGCACTGATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: WRISRLHTQASPVTNFTLPSSFS*LALILK
Trigger: CTTCAAGATCAGTGCCAAGCATGAGAAGGAGGAAGG...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTCAGAACATAGGTCATaGGGCCTTGCAAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSSEHRS*GLASGS
Trigger: GCTACCGCTTGCAAGGCCGCATGACCTATGTTCTGA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAAGCCCCTCGTACATaGTGGGTAGGGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGQAPRT*WVGRSL
Trigger: CAGTGATCTCCCTACCCAGCATGTACGAGGGGCTTG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGATGGGAGAGGGCCCACTaGCTCGAACCCAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRWERAH*LEPSLH
Trigger: ATGAAGACTGGGTTCGAGCCAGTGGGCCCTCTCCCA...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGAGGCCTGGATGCAGTaGTTGTCACTAAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAEAWMQ*LSLNKK
Trigger: CTTTTTGTTTAGTGACAACCACTGCATCCAGGCCTC...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGTAGACCAAGCAGGTaGCAGTGCCTGCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVRRPSR*QCLRRG
Trigger: ACCCCTACGCAGGCACTGCCACCTGCTTGGTCTACG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCAGCAGGTGCAGAGCCTaGTGCAGGTGTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGSRCRA*CRCSLC
Trigger: ACACAGAGAACACCTGCACCAGGCTCTGCACCTGCT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCTTGCTACTTCATCGCTaGGCATCATTAGTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGLLLHR*ASLVRP
Trigger: AGGACGAACTAATGATGCCCAGCGATGAAGTAGCAA...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAATTGCTACTTCATCGCTaGGCATCATTAGTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQLLLHR*ASLVRP
Trigger: AGGACGAACTAATGATGCCCAGCGATGAAGTAGCAA...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCAGGAGGGAAGGCAGTTaGTGTAGCTGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGRREGS*CSCCRQ
Trigger: CTGCCTACAGCAGCTACACCAACTGCCTTCCCTCCT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGATCTTGCCCAGAGGGATaGAGCCACCATGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRSCPEG*SHHGHP
Trigger: AGGATGCCCATGGTGGCTCCATCCCTCTGGGCAAGA...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTATTGTCGGAAGTGAGCTaGCAGTGGGACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVLSEVS*QWDPEG
Trigger: CCCCTCTGGGTCCCACTGCCAGCTCACTTCCGACAA...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGACACGGGCTTTCTaGAAAGCAGCCTTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGQTRAF*KAALGV
Trigger: CACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCACCACGGCTGTGTAATTaGCAGAAACAGCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPPRLCN*QKQPAS
Trigger: ACTGGCAGGCTGTTTCTGTCAATTACACAGCCGTGG...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCTCTTCCTCATCATTaGAGTTCCCACACATGCCGC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAPLPHH*SSHTCR
Trigger: GCGGCATGTGTGGGAACTTCAATGATGAGGAAGAGG...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGCTGTTGTCGGAAGTaGGCTGGCAGTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPACCCRK*AGSGTQ
Trigger: CTGGGTCCCACTGCCAGCTCACTTCCGACAACAGCA...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGATTGTTCAGACTTGTCTaGGACACAATTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGLFRLV*DTIAVA
Trigger: AGCAACAGCAATTGTGTCTCAGACAAGTCTGAACAA...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCCATCTTCTGGTTGTTaGCCACAAGCTCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGPSSGC*PQAPDQ
Trigger: CTGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTTTTAATCTTCTTGTCTaGAGACAGCTCAAAACTGAG +
Preference number: 4 (lower is better)
Translates to: KAALGVVPQGADLPRSAAFNLLV*RQLKTE
Trigger: CTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAAA...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGTGTCATACAGCTCTaGTATATGGTACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFGVIQL*YMVPAG
Trigger: TCCAGCAGGTACCATATATCAGAGCTGTATGACACC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR GCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGCAGGTGGCAGTGCCTaGGTAGGGGTGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAAGGSA*VGVASI
Trigger: TATGGATGCCACCCCTACGCAGGCACTGCCACCTGC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGAAGCGGCCTTCACGTaGAGCAGGCATGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPEAAFT*SRHVSN
Trigger: ATTTGAGACATGCCTGCTGCACGTGAAGGCCGCTTC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACTTGAAGTAGCTGCCTaGAGGGTGGAGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVLEVAA*RVEAPT
Trigger: TGTGGGTGCCTCCACCCTGCAGGCAGCTACTTCAAG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAAGCGAATTCTGTTGTTaGTTTCACAGACGCACAACT +
Preference number: 4 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTSEFCC*FHRRTT
Trigger: AGTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCT...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGAGCGAATTCTGTTGTTaGTTTCACAGACGCACAACT +
Preference number: 4 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRSEFCC*FHRRTT
Trigger: AGTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCT...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTGTCTGAGACACAATTaGTGTTGCTGTTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVICLRHN*CCCCRK
Trigger: CTTCCGACAACAGCAACAGCAATTGTGTCTCAGACA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGTGAGCTGGCACAGGTaGACCGCTGAGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAVSWHR*TAESSP
Trigger: AGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCAC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTCAGTCACAGAAGGGATaGGCGTTGTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVQSQKG*ALSSKS
Trigger: TGACTTTGAAGACAACGCCCATCCCTTCTGTGACTG...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACTCCTTGTCTCCTGCTaGGCTGCCGTCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVLLVSC*AAVQLQ
Trigger: CTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGGGAGTACTTGCTGTTaGGCGGGCAGGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVGSTCC*AGRPLG
Trigger: GCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCGCGGTTCTCGTTGGTaGCGCTCACAACAAAATAGC +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGRGSRW*RSQQNS
Trigger: GCTATTTTGTTGTGAGCGCCACCAACGAGAACCGCG...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCCAGCATATCTGGTTaGGTTTGCAGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAPSISG*VCRCSG
Trigger: TCCAGAGCACCTGCAAACCCAACCAGATATGCTGGG...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAAGGGCCCAGCATATCTaGTTGGGTTTGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRRAQHI*LGLQVL
Trigger: GAGCACCTGCAAACCCAACCAGATATGCTGGGCCCT...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGCGTCCGGGATAGAATaGTTACTACCATCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFASGIE*LLPSKL
Trigger: GAGCTTTGATGGTAGTAACCATTCTATCCCGGACGC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACTTCCTGCAAGAAGATaGAGCTCCTGGGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRLPARR*SSWADP
Trigger: TGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAG...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGTGTGTGTCCCACACTaGGAGATCTGGCACTCGACC +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAVCVPH*EIWHST
Trigger: GGTCGAGTGCCAGATCTCTCAGTGTGGGACACACAC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGTCTCAAATGGGCCATaGGTGTCGACCAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAVSNGP*VSTSRP
Trigger: TGGACGGCTGGTCGACACTCATGGCCCATTTGAGAC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTTTGTTCAGACTTGTCTaGGACACAATTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTLFRLV*DTIAVA
Trigger: AGCAACAGCAATTGTGTCTCAGACAAGTCTGAACAA...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTTGTTCAGACTTGTCTaGGACACAATTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVILFRLV*DTIAVA
Trigger: AGCAACAGCAATTGTGTCTCAGACAAGTCTGAACAA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCCAGCTCAAAGTCGGTaGCCAGGTAGAGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVPAQSR*PGRAVG
Trigger: GCCAACGGCTCTACCTGGTCACCGACTTTGAGCTGG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTTCAAAGCTGCATGTTTaGATCATACAGACGCGATTA +
Preference number: 4 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDASKLHV*IIQTRL
Trigger: TAATCGCGTCTGTATGATGCAAACATGCAGCTTTGA...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCTCCCGCAGGGCCCATaGCATGGACGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVLPQGP*HGRVHF
Trigger: AAAATGGACCCGTCCATGGCATGGGCCCTGCGGGAG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTATCGGGTTGTTTATGCTaGTGCAGGTGTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVSGCLC*CRCLGR
Trigger: CCTGCCCAGACACCTGCAGCAGCATAAACAACCCGA...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCATATCTGGTTGGGTTTaGAGGTGCTCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGISGWV*RCSGSR
Trigger: CCTGCTTCCAGAGCACCTGCAAACCCAACCAGATAT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCATGTTCCGCTGGAATCTaGTGCTCATCTACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQACSAGI*CSSTRR
Trigger: TCTCCTGGTAGATGAGCAGCAGATTCCAGCGGAACA...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGTCACAGAGGTCATTTaGAATGTCAAAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: RWRISRLHTQASPVTNFTVTEVI*NVKAAC
Trigger: ACATGCAGCTTTGACATTCCAAATGACCTCTGTGAC...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCATCAACTGCCACAGCTaGCTCTGGGGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGINCHS*LWGLSK
Trigger: TTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGAT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCACACAAGGAGCAATGCTaGTTGCATCAACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPHKEQC*LHQLPQ
Trigger: CTGTGGCAGTTGATGCAACCAGCATTGCTCCTTGTG...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGAGACTCTGACAACTTaGGTCAATGTCCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPETLTT*VNVLIF
Trigger: AAAGATAAGGACATTGACCCAAGTTGTCAGAGTCTC...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACTCCTGCTGTTCCGCTaGAATCTGCTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPLLLFR*NLLLIY
Trigger: GTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAG...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCAGTCCCCGCACTGAATaGCTCCTCCCGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVSPRTE*LLPCRH
Trigger: GTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACT...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAAGAAGATGGAGCTCCTaGGCGGATCCATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRRRWSS*ADPSCC
Trigger: GCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCT...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCTGGGCTTTTCTGTGGTaGCACTGGGTTTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGWAFLW*HWVFLW
Trigger: CCATAGAAAAACCCAGTGTCACCACAGAAAAGCCCA...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCTCCACGCACCGGTCTaGGCAGAACATGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNLHAPV*AEHAGE
Trigger: TTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTCACGTGGACGGCTTTaGTGTAGGAGACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPASRGRL*CRRPPG
Trigger: TCCTGGAGGTCTCCTACATCAAAGCCGTCCACGTGA...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAAAGATGTGGCCTTTCTaGCATTCACAGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPKMWPF*HSQLSA
Trigger: TGCTGAGAGCTGTGAATGTCAGAAAGGCCACATCTT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCTCAATCTCTAAGAGATaGTTCCCGTCAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSSISKR*FPSNLT
Trigger: AGTCAAGTTTGACGGGAATCATCTCTTAGAGATTGA...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTTCAATCTCTAAGAGATaGTTCCCGTCAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTSISKR*FPSNLT
Trigger: AGTCAAGTTTGACGGGAATCATCTCTTAGAGATTGA...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCTCAATCTCTAAGAGATaGTTCCCGTCAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCSISKR*FPSNLT
Trigger: AGTCAAGTTTGACGGGAATCATCTCTTAGAGATTGA...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAGTACGTCCACAGTCTTaGTCAGAACATAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAVRPQS*SEHRSC
Trigger: GCATGACCTATGTTCTGATCAAGACTGTGGACGTAC...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTTTAATCTTCTTGTCTaGAGACAGCTCAAAACTGAG +
Preference number: 4 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHFNLLV*RQLKTE
Trigger: CTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAAA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCATAAATGTGGAGGGCTaGACCAGGAGACTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVINVEG*TRRLAP
Trigger: CGGGGCCAGTCTCCTGGTGCAGCCCTCCACATTTAT...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCACACAGGGAGTACTTaGTGTTGGGCGGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNHTGST*CWAGRP
Trigger: TGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCTTGAAGTAGCTGCCTaGAGGGTGGAGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVLEVAA*RVEAPT
Trigger: TGTGGGTGCCTCCACCCTGCAGGCAGCTACTTCAAG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTAGCGAATTCTGTTGTTaGTTTCACAGACGCACAACT +
Preference number: 4 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPSEFCC*FHRRTT
Trigger: AGTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCT...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCCACTCGGGTTCTCCTaGTGTTCCGCTGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVPLGFS*CSAGIC
Trigger: GCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTGTCTGAGACACAATTaGTGTTGCTGTTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSCLRHN*CCCCRK
Trigger: CTTCCGACAACAGCAACAGCAATTGTGTCTCAGACA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGATCCTCGTTCTGTAAATaGACTCTCTGGTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRSSFCK*TLWSRP
Trigger: TGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGA...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGGTAGTAGATGCCATTaGTGGTGCAGCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVGSRCH*WCSHSQ
Trigger: CTGACTGTGGCTGCACCAGCAATGGCATCTACTACC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR GCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACCTCAGTCAGAAAGCTaGTGCCCAGCTGGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVPQSES*CPAGSR
Trigger: TCTACTACCAGCTGGGCAGCAGCTTTCTGACTGAGG...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS-3UTR CCA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGTCACAGAGGTCATTTaGAATGTCAAAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFVTEVI*NVKAAC
Trigger: ACATGCAGCTTTGACATTCCAAATGACCTCTGTGAC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGGTACTTGGAGCATGTaGAGACATCACCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVGTWSM*RHHQGC
Trigger: GCAGCCTTGGTGATGTCTCCACATGCTCCAAGTACC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTGAGGCCTGGATGCAGTaGTTGTCACTAAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSEAWMQ*LSLNKK
Trigger: CTTTTTGTTTAGTGACAACCACTGCATCCAGGCCTC...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCAACTCTTTGCAGCCTaGCTTGTACCACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVQLFAA*LVPPLP
Trigger: GGGGAGCGGTGGTACAAGCCAGGCTGCAAAGAGTTG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGCTGTCTTGGGACCTaGACCAGCAAGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNSCLGT*TSKAGS
Trigger: TGACCCGGCCTTGCTGGTCCAGGTCCCAAGACAGCT...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCAGCAGGTGCAGAGCCTaGTGCAGGTGTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPASRCRA*CRCSLC
Trigger: ACACAGAGAACACCTGCACCAGGCTCTGCACCTGCT...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGTTCCATAGTAGGTTGTaGGGATTTCAATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLFHSRL*GFQSLR
Trigger: TCTTAGAGATTGAAATCCCCACAACCTACTATGGAA...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACGGGCCCAGGTTGTCCTaGGAAGAGAGTGTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNGPRLS*EESVFP
Trigger: CGGAAACACACTCTCTTCTCAGGACAACCTGGGCCC...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCTGCACTCGAGGCCACTaGGGACGAAGCCCGGATTGC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVCTRGH*GRSPDC
Trigger: GCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCA...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTCAAAGCTGCATGTTTaGATCATACAGACGCGATTA +
Preference number: 4 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVSKLHV*IIQTRL
Trigger: TAATCGCGTCTGTATGATGCAAACATGCAGCTTTGA...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAACAAACCACAGAGTTTaGCAGAGTATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPTNHRV*QSMCWT
Trigger: TGTCCAGCACATACTCTGGCAAACTCTGTGGTTTGT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGGGGAAGGGCACAGTTaGGAGCCTGGACTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVGEGHS*EPGLLL
Trigger: TAAAAGGAGTCCAGGCTCCCAACTGTGCCCTTCCCC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACTCTTCTGAGTCCACTTaGCCCCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNSSEST*PRRQLG
Trigger: TCCCAACTGCCTCCGGGGCCAAGTGGACTCAGAAGA...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAGCGTCCGGGATAGAATaGTTACTACCATCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPASGIE*LLPSKL
Trigger: GAGCTTTGATGGTAGTAACCATTCTATCCCGGACGC...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCTTGCTACTTCATCGCTaGGCATCATTAGTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGLLLHR*ASLVRP
Trigger: AGGACGAACTAATGATGCCCAGCGATGAAGTAGCAA...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGAGACTCTGACAACTTaGGTCAATGTCCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPETLTT*VNVLIF
Trigger: AAAGATAAGGACATTGACCCAAGTTGTCAGAGTCTC...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCCTCCTGCTGTTCCGCTaGAATCTGCTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPALLLFR*NLLLIY
Trigger: GTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAG...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGCAGGGCCCATGCCATaGACGGGTCCATTTTTATGT +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVAGPMP*TGPFLC
Trigger: ACATAAAAATGGACCCGTCCATGGCATGGGCCCTGC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCAGCTGCATGGGCTGTTaGTGTCCTGAGGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVSCMGC*CPEGTV
Trigger: CACCGTCCCCTCAGGACACCAACAGCCCATGCAGCT...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGGTACTTGGAGCATGTaGAGACATCACCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVGTWSM*RHHQGC
Trigger: GCAGCCTTGGTGATGTCTCCACATGCTCCAAGTACC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACTTGATTAGCACACGGTaGCCCTTCTGCAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNLISTR*PFCRVT
Trigger: GGTCACCCTGCAGAAGGGCCACCGTGTGCTAATCAA...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACGCCCCTCGTACATGCTaGGTAGGGAGATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNAPRTC*VGRSLH
Trigger: ATGCAGTGATCTCCCTACCCAGCATGTACGAGGGGC...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCAAGCAGCCTTGGGTGTaGTTCCCCAGGGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVKQPWV*FPRVQT
Trigger: GGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTT...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCCGTCCAACTTCAGGTaGTCATTGTCACTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNPSNFR*SLSLLP
Trigger: CGGCAACAGTGACAATGACCACCTGAAGTTGGACGG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCGCGGTTCTCGTTGGTaGCGCTCACAACAAAATAGC +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNRGSRW*RSQQNS
Trigger: GCTATTTTGTTGTGAGCGCCACCAACGAGAACCGCG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTTTCCATAGTAGGTTGTaGGGATTTCAATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSFHSRL*GFQSLR
Trigger: TCTTAGAGATTGAAATCCCCACAACCTACTATGGAA...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGAGACTCTGACAACTTaGGTCAATGTCCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPETLTT*VNVLIF
Trigger: AAAGATAAGGACATTGACCCAAGTTGTCAGAGTCTC...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACTCTACCAGGAGACTCTaGCAACTTGGGTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNSTRRL*QLGSMS
Trigger: GGACATTGACCCAAGTTGTCAGAGTCTCCTGGTAGA...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACTGGGCTTTTCTGTGGTaGCACTGGGTTTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNWAFLW*HWVFLW
Trigger: CCATAGAAAAACCCAGTGTCACCACAGAAAAGCCCA...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAAGATGTGGCCTTTCTaGCATTCACAGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNKMWPF*HSQLSA
Trigger: TGCTGAGAGCTGTGAATGTCAGAAAGGCCACATCTT...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR TCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCCTCTTCCTCATCATTaGAGTTCCCACACATGCCGC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVPLPHH*SSHTCR
Trigger: GCGGCATGTGTGGGAACTTCAATGATGAGGAAGAGG...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCTTTCTGCCCAGGTCTTaGATTCTTGGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVFLPRS*ILGVQE
Trigger: CTCCTGGACCCCAAGAATGCAAGACCTGGGCAGAAA...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCTTGACAGAAACAGCCTaGCAGTTGGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVLTETA*QLGPGC
Trigger: ACAACCTGGGCCCAACTGGCAGGCTGTTTCTGTCAA...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCAGACGCACAACTCTTTaGAGCCTGGCTTGTACCACC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVRRTTL*SLACTT
Trigger: GGTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCT...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCGCCAGTGGAAGAAACTaGAGATACGGGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVASGRN*RYGRKL
Trigger: GAGCTTCCTCCCGTATCTCCAGTTTCTTCCACTGGC...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGAGGCCTGGATGCAGTaGTTGTCACTAAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVEAWMQ*LSLNKK
Trigger: CTTTTTGTTTAGTGACAACCACTGCATCCAGGCCTC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGATTCCATAGTAGGTTGTaGGGATTTCAATCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRFHSRL*GFQSLR
Trigger: TCTTAGAGATTGAAATCCCCACAACCTACTATGGAA...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGCATCATGTCATTCTTaGGGTTCTTGTCGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVASCHS*GSCRSF
Trigger: GAAACTACGACAAGAACCGCAAGAATGACATGATGC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCGCGTCCGGGATAGAATaGTTACTACCATCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVASGIE*LLPSKL
Trigger: GAGCTTTGATGGTAGTAACCATTCTATCCCGGACGC...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR GCA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCGCATCATGTCATTCTTaGGGTTCTTGTCGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVASCHS*GSCRSF
Trigger: GAAACTACGACAAGAACCGCAAGAATGACATGATGC...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS GCA 90 bp GTCTATGCGGGAGGCGCACTGGGCCCACACAGGAGCCCGGAGCGCTaGCTCGCACTTTTCCCGCGCCCTGCGGAGGTCGGCCGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: VYAGGALGPHRSPER*LALFPRPAEVGRPA
Trigger: TGCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCATAGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp CCCACACAGGAGCCCGGAGCGCTGCCTCGCACTTTTCCCGCGCCCTaGGGAGGTCGGCCGCCCTGCAGTTTCCACTCGGGTTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PTQEPGALPRTFPAP*GGRPPCSFHSGSPA
Trigger: AGCAGGAGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCTGTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGCCCAGCTCCGCCCCTaGTCCCTCCTCCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQAQLRP*SLLLRW
Trigger: CCAGCGGAGGAGGAGGGACAAGGGGCGGAGCTGGGC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS GCA 90 bp GGGTCTGCCAGCACCCTACAGGCCTGGGTGCTGTTGCTCGCCAGCTaGTCCGGGCTACATTCGGACACTTGGAGGCCCGTGCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GSASTLQAWVLLLAS*SGLHSDTWRPVRRP
Trigger: GGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp AGGGGCCCTGGGGGTCTGCCAGCACCCTACAGGCCTGGGTGCTGTTaGTCGCCAGCTGCTCCGGGCTACATTCGGACACTTGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: RGPGGLPAPYRPGCC*SPAAPGYIRTLGGP
Trigger: CGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GCACAGTCCACCAGGAAGGGCGTGAGGTCTATGCGGGAGGCGCACTaGGCCCACACAGGAGCCCGGAGCGCTGCCTCGCACTTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: AQSTRKGVRSMREAH*AHTGARSAASHFSR
Trigger: GCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGGACTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TGGGTGCTGTTGCTCGCCAGCTGCTCCGGGCTACATTCGGACACTTaGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTTGTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: WVLLLASCSGLHSDT*RPVRRPSSAPCPSS
Trigger: GGAGGAGGGACAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TCGGGGCGGCGGCCCTCTTCACCCGAGAGCAGCAGCAGCCTGAGCTaGGCGCCCCAAGACAGCCCGAACATGTGGTGGGCAAAGTGCACA +
Preference number: 5 (lower is better)
Translates to: SGRRPSSPESSSSLS*APQDSPNMWWAKCT
Trigger: TGTGCACTTTGCCCACCACATGTTCGGGCTGTCTTGGGGCGCCCAGCTCAGGCTGCTGCTGCTCTCGGGTGAAGAGGGCCGCCGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp AGCCGGGCTGACAAATGCAGCCCTCAGCGCAGGCAGAGGGGACTTTaGCGCCCTCACACCGGCCATCCAGGTCCCAGCAGGAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SRADKCSPQRRQRGL*RPHTGHPGPSRRVS
Trigger: GCTCACCCTCCTGCTGGGACCTGGATGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCTGCGCTGAGGGCTGCATTTGTCAGCCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGTGGCCCCGGAGGCAGTaGGGATCCAGGTCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGWPRRQ*GSRSSH
Trigger: GTGACTGGACCTGGATCCCAACTGCCTCCGGGGCCA...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGGCACACAGGGAGTACTaGCTGTTGGGCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGAHREY*LLGGQA
Trigger: GGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGC...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCGCCCAGCTCCGCCCCTaGTCCCTCCTCCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPAQLRP*SLLLRW
Trigger: CCAGCGGAGGAGGAGGGACAAGGGGCGGAGCTGGGC...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS GCA 90 bp GCGCTGCCTCGCACTTTTCCCGCGCCCTGCGGAGGTCGGCCGCCCTaGAGTTTCCACTCGGGTTCTCCTGCTGTTCCGCTGGAATCTGCT +
Preference number: 5 (lower is better)
Translates to: ALPRTFPAPCGGRPP*SFHSGSPAVPLESA
Trigger: AGCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGTGCGAGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGGCACACAGGGACGCGTAGGCCTGCAGGGAGCGGCACAGGGCTGTaGTGTCGCCCTTGGTCCCACACTGACCATGCACGCAACTGGCAA +
Preference number: 5 (lower is better)
Translates to: GHTGTRRPAGSGTGL*CRPWSHTDHARNWQ
Trigger: TTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCTCCCTGCAGGCCTACGCGTCCCTGTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CAGGCAGCAAAGGGGCCCTGGGGGTCTGCCAGCACCCTACAGGCCTaGGTGCTGTTGCTCGCCAGCTGCTCCGGGCTACATTCGGACACT +
Preference number: 5 (lower is better)
Translates to: QAAKGPWGSASTLQA*VLLLASCSGLHSDT
Trigger: AGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCCTTTGCTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAGGTGGCCCCGAAGGCTaGCAGAGCCTGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSGGPEG*QSLAEG
Trigger: GCCCTCTGCCAGGCTCTGCAAGCCTTCGGGGCCACC...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACAGGCAGAGGGGACTTaGGCGCCCTCACACCGGCCA +
Preference number: 5 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPQAEGT*APSHRP
Trigger: TGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCTG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCAGGCAGAGGGGACTTaGGCGCCCTCACACCGGCCA +
Preference number: 5 (lower is better)
Translates to: KAALGVVPQGADLPRSAAQAEGT*APSHRP
Trigger: TGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCTG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp TGCAGGGAGCGGCACAGGGCTGTGGTGTCGCCCTTGGTCCCACACTaGCCATGCACGCAACTGGCAAAGCTGGACTGGGGAGGCACCACC +
Preference number: 5 (lower is better)
Translates to: CRERHRAVVSPLVPH*PCTQLAKLDWGGTT
Trigger: GGTGGTGCCTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCTCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp AGCAGCAGCCTGAGCTGGGCGCCCCAAGACAGCCCGAACATGTGGTaGGCAAAGTGCACACAGAGGGGGCCTTGCTCCCATAGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSSLSWAPQDSPNMW*AKCTQRGPCSHRSG
Trigger: CCCCGACCTATGGGAGCAAGGCCCCCTCTGTGTGCACTTTGCCCACCACATGTTCGGGCTGTCTTGGGGCGCCCAGCTCAGGCTGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp ACGCGTAGGCCTGCAGGGAGCGGCACAGGGCTGTGGTGTCGCCCTTaGTCCCACACTGACCATGCACGCAACTGGCAAAGCTGGACTGGG +
Preference number: 5 (lower is better)
Translates to: TRRPAGSGTGLWCRP*SHTDHARNWQSWTG
Trigger: CCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCTCCCTGCAGGCCTACGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGGAGGACCCTAAGTGGTaGCTCCCAGGGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQEDPKW*LPGERG
Trigger: TCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCTC...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGCCACAAACCGCCCGCTaGCACCCAGGAAGACGCCTT +
Preference number: 5 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPPQTAR*HPGRRL
Trigger: AAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGG...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGCCACAAACCGCCCGCTaGCACCCAGGAAGACGCCTT +
Preference number: 5 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRPQTAR*HPGRRL
Trigger: AAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGG...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGGCACACAGGGAGTACTaGCTGTTGGGCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRAHREY*LLGGQA
Trigger: GGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGC...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGGCAGGTGGCGGCACCTaGGGCATGGCAGCCATAGAT +
Preference number: 5 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPAGGGT*GMAAID
Trigger: ATCTATGGCTGCCATGCCCAAGGTGCCGCCACCTGC...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTGGGCGGATCCATCTaGTTGCGTCCTTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGLGGSI*LRPSTR
Trigger: CCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAG...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp GGTGGAGGCACCCACACTGGGAGCGAGGTATGCACTCGAGGCCACTaGGGACGAAGCCCGGATTGCATTCACAGGCCTCCACGCACCGGT +
Preference number: 5 (lower is better)
Translates to: GGGTHTGSEVCTRGH*GRSPDCIHRPPRTG
Trigger: ACCGGTGCGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCATACCTCGCTCCCAGTGTGGGTGCCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp CTCCGAACTCACAGAGGGTGTTTGCACAGTCCACCAGGAAGGGCGTaGGGTCTATGCGGGAGGCGCACTGGGCCCACACAGGAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: LRTHRGCLHSPPGRA*GLCGRRTGPTQEPG
Trigger: TCCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAGTTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp GTGAGCTGGCAGTGGGACCCAGAGGGGCATCGGAAGTCCCCGCACTaGATGGCTCCTCCCGTGCAGACACACTTCTCCGTGCAACCGCTG +
Preference number: 5 (lower is better)
Translates to: VSWQWDPEGHRKSPH*MAPPVQTHFSVQPL
Trigger: CAGCGGTTGCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCGATGCCCCTCTGGGTCCCACTGCCAGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp TCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACACGGGCTTTCGCAGAGGGTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SQVKVAPCSRHCPSF*QGFCRHGLSQRVRS
Trigger: GGACCGCACCCTCTGCGAAAGCCCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546292.2
ENST00000620596.4
CDS CCA 90 bp AACCCTGCGGGCACAGTGACGGTGGTGAGCATCCAGGAGGGTCTCTaGGTGTTCCAGTGTTTCCAGAGCACATCGGGGCGGCGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: NPAGTVTVVSIQEGL*VFQCFQSTSGRRPS
Trigger: AGAGGGCCGCCGCCCCGATGTGCTCTGGAAACACTGGAACACCCAGAGACCCTCCTGGATGCTCACCACCGTCACTGTGCCCGCAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GCTGGCAGTGGGACCCAGAGGGGCATCGGAAGTCCCCGCACTGAATaGCTCCTCCCGTGCAGACACACTTCTCCGTGCAACCGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGSGTQRGIGSPRTE*LLPCRHTSPCNRWR
Trigger: TCTCCAGCGGTTGCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCGATGCCCCTCTGGGTCCCACTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACAACCACAGAGGCCGTGTaGCTTCCCTGGATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTTTEAV*LPWMPL
Trigger: CAAGGGCATCCAGGGAAGCAACACGGCCTCTGTGGT...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGACCACAGAGGCCGTGTaGCTTCCCTGGATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKTTEAV*LPWMPL
Trigger: CAAGGGCATCCAGGGAAGCAACACGGCCTCTGTGGT...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGATTCGTAGCGGGCATTaGGAGGGCAGCGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGIRSGH*EGSALY
Trigger: GTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAAT...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACATGGCAGCTGGAGGGCTaGCCACCCACAAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTWQLEG*PPTRKQ
Trigger: CTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCCA...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGGGCAGTCCCTCGGGTaGTTTATGCTGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHGQSLG*FMLLQV
Trigger: CACCTGCAGCAGCATAAACAACCCGAGGGACTGCCC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGGTGGCCCCGAAGGCTaGCAGAGCCTGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCGGPEG*QSLAEG
Trigger: GCCCTCTGCCAGGCTCTGCAAGCCTTCGGGGCCACC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGGCGGATCCATCTTGTaGCGTCCTTCCACGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHGGSIL*RPSTRR
Trigger: CCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCAGCTACATTCGGACACTaGGAGGCCCGTGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSATFGH*EARAEA
Trigger: GGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGC...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGCTACATTCGGACACTaGGAGGCCCGTGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGATFGH*EARAEA
Trigger: GGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACCGGGGTCTGCCAGGTaGGCACAGGATGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQPGSAR*AQDAGQ
Trigger: CTGCCCAGCATCCTGTGCCAACCTGGCAGACCCCGG...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542585.5
CDS TCA 90 bp CCACGCAGATGTCACCTGGGGCGCAGAAGGGCCGGCTCACCAGTCTaGCTGACTGGCCTGCCTGGGAGAACTCGTCAGCCTCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: PRRCHLGRRRAGSPV*LTGLPGRTRQPQGR
Trigger: TCTACCTTGAGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGCCCTTCTGCGCCCCAGGTGACATCTGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp GCCGGTGGGAGAGGGCCCACTGGCTCGAACCCAGTCTTCATCGTCTaGGGACACTTGGGACCAGTCACAGAGGGGTTTGGCGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: AGGRGPTGSNPVFIV*GHLGPVTEGFGVIL
Trigger: GAGGATGACGCCAAACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGGGTTCGAGCCAGTGGGCCCTCTCCCACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp ACCCAGAGGGGCATCGGAAGTCCCCGCACTGAATGGCTCCTCCCGTaGAGACACACTTCTCCGTGCAACCGCTGGAGACCCAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TQRGIGSPRTEWLLP*RHTSPCNRWRPSSC
Trigger: GCAAGAGCTGGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCGATGCCCCTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CAGGCCATTGGGCAGAAGTGGGGTTCCCTCCAGGGCTTCACAGCGTaGCCTGCGTCCTGGCAGGTGGTGGTCATGGTGGACATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: QAIGQKWGSLQGFTA*PASWQVVVMVDMCV
Trigger: CACACACATGTCCACCATGACCACCACCTGCCAGGACGCAGGCCACGCTGTGAAGCCCTGGAGGGAACCCCACTTCTGCCCAATGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCATCGTCTGCGGACACTaGGGACCAGTCACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPIVCGH*GPVTEG
Trigger: CCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGAT...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACTGGCCCCGGAGGCAGTaGGGATCCAGGTCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: QTRAFWKAALGVVPQGADWPRRQ*GSRSSH
Trigger: GTGACTGGACCTGGATCCCAACTGCCTCCGGGGCCA...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCTGGCCCCGGAGGCAGTaGGGATCCAGGTCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPWPRRQ*GSRSSH
Trigger: GTGACTGGACCTGGATCCCAACTGCCTCCGGGGCCA...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCACCACAGAGGCCGTGTaGCTTCCCTGGATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AFWKAALGVVPQGADLPRTTEAV*LPWMPL
Trigger: CAAGGGCATCCAGGGAAGCAACACGGCCTCTGTGGT...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACAAACCGCCCGCTaGCACCCAGGAAGACGCCTT +
Preference number: 5 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRPQTAR*HPGRRL
Trigger: AAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGG...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCGCAGGTGGCGGCACCTaGGGCATGGCAGCCATAGAT +
Preference number: 5 (lower is better)
Translates to: WSRPVVRPPQAPAVPVGRAGGGT*GMAAID
Trigger: ATCTATGGCTGCCATGCCCAAGGTGCCGCCACCTGC...GCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGCACCACCTGGTGACATaGAGAGAAGGGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRHHLVT*REGSLR
Trigger: CCTCAGGGACCCTTCTCTCAATGTCACCAGGTGGTG...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCGCACAGGGCAGTGCTTaGGGGCAGTCCCTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGAQGSA*GQSLGL
Trigger: CAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTGC...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGATAGGTCATGCGGCCTaGCAAGCGGTAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQIGHAA*QAVAEA
Trigger: GGCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGGCGGATCCATCTTGTaGCGTCCTTCCACGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KAALGVVPQGADLPRSAAGGSIL*RPSTRR
Trigger: CCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCC...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGGCTCCTCTTGCTCTCTaGGGTCCTGAGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRAPLAL*GPEQST
Trigger: TGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGC...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACATTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCATTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: WVWFPRVQTSPALQLKGSFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...TGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACTTCTGGAAAGCAGCCTaGGGTGTGGTTCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHFWKAA*GVVPQG
Trigger: ACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAA...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp GACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTaGGCTGGCACAGGTGCACCGCTGAGAGCAGTCCTCAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: DLPRSAAEGLTQQDP*AGTGAPLRAVLSQK
Trigger: TTTCTGACTGAGGACTGCTCTCAGCGGTGCACCTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000613979.5
ENST00000618565.4
ENST00000620868.4
CDS GCA 90 bp CTGAATGGCAGGTGTCAGGGCATGGCTTCGCACACAGGGAGTACTTaGTGTTGGGCGGGCAGGCCATTGGGCAGAAGTGGGGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LNGRCQGMASHTGST*CWAGRPLGRSGVPS
Trigger: GGAGGGAACCCCACTTCTGCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGCGAAGCCATGCCCTGACACCTGCCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCGAGGACCCTAAGTGGTaGCTCCCAGGGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGEDPKW*LPGERG
Trigger: TCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCTC...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTATTCGTAGCGGGCATTaGGAGGGCAGCGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: KAALGVVPQGADLPRSAAIRSGH*EGSALY
Trigger: GTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAAT...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGGCTGGGAGAGTAACTaGCTGACCCCCAACCAGAGT +
Preference number: 5 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPGWESN*LTPNQS
Trigger: ACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCGGCTGGGAGAGTAACTaGCTGACCCCCAACCAGAGT +
Preference number: 5 (lower is better)
Translates to: AFWKAALGVVPQGADLPRGWESN*LTPNQS
Trigger: ACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCC...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGGAGTACTTGCTGTaGGGCGGGCAGGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRREYLL*GGQAIG
Trigger: CCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCT...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTCTTTGCAGCCTGGCTaGTACCACCGCTCCCCTACC +
Preference number: 5 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGSLQPG*YHRSPT
Trigger: GGTAGGGGAGCGGTGGTACAAGCCAGGCTGCAAAGA...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGACGCACAACTCTTaGCAGCCTGGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTQTHNS*QPGLYH
Trigger: GTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCTG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGTCGGGGCGCAGGTaGTCATCCAAGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VQTSPALQLKGSHSRIRELSGRR*SSKLLL
Trigger: CAACAACAGCTTGGATGACAACCTGCGCCCCGACAG...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCCTGTCGGGGCGCAGGTaGTCATCCAAGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AFWKAALGVVPQGADLPRLSGRR*SSKLLL
Trigger: CAACAACAGCTTGGATGACAACCTGCGCCCCGACAG...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGGCCCAGCATATCTGGTaGGGTTTGCAGGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SPALQLKGSHSRIRELAQAQHIW*GLQVLW
Trigger: CCAGAGCACCTGCAAACCCAACCAGATATGCTGGGC...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGGCGGATCCATCTTGTaGCGTCCTTCCACGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGGGSIL*RPSTRR
Trigger: CCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCACTGTTGCCAAAGGTGTaGAGGTTCTGGGTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPLLPKV*RFWVRA
Trigger: CGCCCTGACCCAGAACCTCAACACCTTTGGCAACAG...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGCCCAGCTCCGCCCCTaGTCCCTCCTCCTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGAQLRP*SLLLRW
Trigger: CCAGCGGAGGAGGAGGGACAAGGGGCGGAGCTGGGC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCAGCACGCAGTGCTCTaGGAAGGGCTCTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCQHAVL*EGLWGH
Trigger: GTGGCCCCAGAGCCCTTCCAAGAGCACTGCGTGCTG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACAGCACGCAGTGCTCTaGGAAGGGCTCTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RWRISRLHTQASPVTNFTQHAVL*EGLWGH
Trigger: GTGGCCCCAGAGCCCTTCCAAGAGCACTGCGTGCTG...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp CCATACTGGCCATTCTTAAGCTGGCACACGGTGTGTGTCCCACACTaGGAGATCTGGCACTCGACCCGACTGCCGGGCCAGCAGCGGCAA +
Preference number: 5 (lower is better)
Translates to: PYWPFLSWHTVCVPH*EIWHSTRLPGQQRQ
Trigger: TTGCCGCTGCTGGCCCGGCAGTCGGGTCGAGTGCCAGATCTCTCAGTGTGGGACACACACCGTGTGCCAGCTTAAGAATGGCCAGTATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp GTCCTGGTCCGTCTGCCAGCTGTTCCCCAGCTCCTCCTTGTCTCCTaGTGGGCTGCCGTCCAACTTCAGGTGGTCATTGTCACTGTTGCC +
Preference number: 5 (lower is better)
Translates to: VLVRLPAVPQLLLVS*WAAVQLQVVIVTVA
Trigger: GGCAACAGTGACAATGACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAGCTGGGGAACAGCTGGCAGACGGACCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp TGGGGACACACTTGTCTTCACTCAGCACATAGCCGGGCTGACAAATaGAGCCCTCAGCGCAGGCAGAGGGGACTTTGGCGCCCTCACACC +
Preference number: 5 (lower is better)
Translates to: WGHTCLHSAHSRADK*SPQRRQRGLWRPHT
Trigger: GGTGTGAGGGCGCCAAAGTCCCCTCTGCCTGCGCTGAGGGCTGCATTTGTCAGCCCGGCTATGTGCTGAGTGAAGACAAGTGTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CTGGTCCGTCTGCCAGCTGTTCCCCAGCTCCTCCTTGTCTCCTGCTaGGCTGCCGTCCAACTTCAGGTGGTCATTGTCACTGTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: LVRLPAVPQLLLVSC*AAVQLQVVIVTVAV
Trigger: GACGGCAACAGTGACAATGACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAGCTGGGGAACAGCTGGCAGACGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGGCTGTGGTGTCGCCCTTGGTCCCACACTGACCATGCACGCAACTaGCAAAGCTGGACTGGGGAGGCACCACCTGGTGACATTGAGAGA +
Preference number: 5 (lower is better)
Translates to: GLWCRPWSHTDHARN*QSWTGEAPPGDIER
Trigger: TCTCTCAATGTCACCAGGTGGTGCCTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGTTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTGATATATaGTACCTGCTGGACACTCCATGGCGCAGAGGGTGCGGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: GWHRMLGRVSYSSDI*YLLDTPWRRGCGPA
Trigger: GGCGGGACCGCACCCTCTGCGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000620868.4
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGAGGACCCTAAGTGGTaGCTCCCAGGGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCEDPKW*LPGERG
Trigger: TCCCCTCTCCCCTGGGAGCAACCACTTAGGGTCCTC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGCTTCCCTGGATGCCCTaGAAAATAAGCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKLPWMP*KISCMG
Trigger: GCCCATGCAGCTTATTTTCAAGGGCATCCAGGGAAG...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGCTTCCCTGGATGCCCTaGAAAATAAGCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: FPRVQTSPALQLKGSHSRLPWMP*KISCMG
Trigger: GCCCATGCAGCTTATTTTCAAGGGCATCCAGGGAAG...CCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACTTCCCTGGATGCCCTaGAAAATAAGCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: GVVPQGADLPRSAAEGLTLPWMP*KISCMG
Trigger: GCCCATGCAGCTTATTTTCAAGGGCATCCAGGGAAG...TGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCATTCGTAGCGGGCATTaGGAGGGCAGCGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: TTTGTSSPSRTPTRLDAGIRSGH*EGSALY
Trigger: GTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAAT...GCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGACTAGGCCTGGGGCTCTaGCACGAAGCAGGACAAGCA +
Preference number: 5 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGLGLGL*HEAGQA
Trigger: TGCTTGTCCTGCTTCGTGCAAGAGCCCCAGGCCTAG...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAAGGGAGTACTTGCTGTaGGGCGGGCAGGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: RWRISRLHTQASPVTNFTREYLL*GGQAIG
Trigger: CCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCT...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACAAGGACGAAGCCCGGATaGCATTCACAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTRTKPG*HSQAST
Trigger: CGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCT...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCAGGACGAAGCCCGGATaGCATTCACAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGRTKPG*HSQAST
Trigger: CGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCT...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACTCTTTGCAGCCTGGCTaGTACCACCGCTCCCCTACC +
Preference number: 5 (lower is better)
Translates to: QTRAFWKAALGVVPQGADSLQPG*YHRSPT
Trigger: GGTAGGGGAGCGGTGGTACAAGCCAGGCTGCAAAGA...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGCTTGGCACTGATCTaGAAGAAGGGCAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPCLALI*KKGKAM
Trigger: CATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCA...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCGGGAGGGTGACCTGTTaGCTGTTGATTAGCACACGG +
Preference number: 5 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPGRVTC*LLISTR
Trigger: CCGTGTGCTAATCAACAGCAAACAGGTCACCCTCCC...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGAGGGTGACCTGTTaGCTGTTGATTAGCACACGG +
Preference number: 5 (lower is better)
Translates to: RPVVRPPQAPAVPVGRPPGRVTC*LLISTR
Trigger: CCGTGTGCTAATCAACAGCAAACAGGTCACCCTCCC...TGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACCAATTGCTGTTGCTGTaGTCGGAAGTGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHQLLLL*SEVSWQ
Trigger: CTGCCAGCTCACTTCCGACAACAGCAACAGCAATTG...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGGGCGGATCCATCTaGTTGCGTCCTTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTLGGSI*LRPSTR
Trigger: CCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAG...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCAAGCTCCAGACCAGCTaGGAGCTGCACTTTATAGCC +
Preference number: 5 (lower is better)
Translates to: LGVVPQGADLPRSAAEGLKLQTS*ELHFIA
Trigger: GGCTATAAAGTGCAGCTCCAAGCTGGTCTGGAGCTT...GAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp GCAGATGTCACCTGGGGCGCAGAAGGGCCGGCTCACCAGTCTGACTaGCTGGCCTGCCTGGGAGAACTCGTCAGCCTCAAGGTAGATATA +
Preference number: 5 (lower is better)
Translates to: ADVTWGAEGPAHQSD*LACLGELVSLKVDI
Trigger: TATATCTACCTTGAGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGCCCTTCTGCGCCCCAGGTGACATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp GAGGAGTTCGAGCATAGTACCCTCCCCAAGGCCATACATGTGGTATaGGAACTCCACGCAGATGTCACCTGGGGCGCAGAAGGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: EEFEHSTLPKAIHVV*ELHADVTWGAEGPA
Trigger: AGCCGGCCCTTCTGCGCCCCAGGTGACATCTGCGTGGAGTTCGCATACCACATGTATGGCCTTGGGGAGGGTACTATGCTCGAACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp CACCCGCAAACCGAACTCCGTCTGCAGCTCCACAAACCGCCCGCTTaGACCCAGGAAGACGCCTTTAGAGGGTATGGCTGGGAGAGTAAC +
Preference number: 5 (lower is better)
Translates to: HPQTELRLQLHKPPA*TQEDAFRGYGWESN
Trigger: GTTACTCTCCCAGCCATACCCTCTAAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTTGCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp AGCTGCTGGTCACCATCCCATCTCACCCGCAAACCGAACTCCGTCTaGAGCTCCACAAACCGCCCGCTTGCACCCAGGAAGACGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SCWSPSHLTRKPNSV*SSTNRPLAPRKTPL
Trigger: TAAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTTGCGGGTGAGATGGGATGGTGACCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp CCGGATTGCATTCACAGGCCTCCACGCACCGGTCTGAGCAGAACATaGCGGAGAATCCTGAATGGCAGGTGTCAGGGCATGGCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: PDCIHRPPRTGLSRT*RRILNGRCQGMASH
Trigger: GTGCGAAGCCATGCCCTGACACCTGCCATTCAGGATTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAGGCCTGTGAATGCAATCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp CAGCCAGGTTCAGAGGATTCAGGTAACTTCCAGGCGGCCCCCAGCTaGATGGAATCGCCTGCAAGCTTTCTGTCGGGGCGCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: QPGSEDSGNFQAAPS*MESPASFLSGRRLS
Trigger: TGACAACCTGCGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTGGAAGTTACCTGAATCCTCTGAACCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp TCACTTCCTGCAAGAAGATGGAGCTCCTGGGCGGATCCATCTTGTTaGGTCCTTCCACGAGGAGGGGCTCCACCCCCTCAGGCAGTACGT +
Preference number: 5 (lower is better)
Translates to: SLPARRWSSWADPSC*VLPRGGAPPPQAVR
Trigger: ACGTACTGCCTGAGGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CCCAGGAGGAGTTCGAGCATAGTACCCTCCCCAAGGCCATACATGTaGTATGCGAACTCCACGCAGATGTCACCTGGGGCGCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PRRSSSIVPSPRPYM*YANSTQMSPGAQKG
Trigger: GCCCTTCTGCGCCCCAGGTGACATCTGCGTGGAGTTCGCATACCACATGTATGGCCTTGGGGAGGGTACTATGCTCGAACTCCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GCCTCCACGCACCGGTCTGAGCAGAACATGCCGGAGAATCCTGAATaGCAGGTGTCAGGGCATGGCTTCGCACACAGGGAGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASTHRSEQNMPENPE*QVSGHGFAHREYLL
Trigger: CAGCAAGTACTCCCTGTGTGCGAAGCCATGCCCTGACACCTGCCATTCAGGATTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TGTCGCCCTTGGTCCCACACTGACCATGCACGCAACTGGCAAAGCTaGACTGGGGAGGCACCACCTGGTGACATTGAGAGAAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: CRPWSHTDHARNWQS*TGEAPPGDIERRVP
Trigger: AGGGACCCTTCTCTCAATGTCACCAGGTGGTGCCTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGCGTACCCACTGAGGACCTGGCAACGCAGCTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAGATCCAGCACGCAGTGCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GVPTEDLATQLLLLS*VLSRAQIQHAVLLE
Trigger: TTCCAAGAGCACTGCGTGCTGGATCTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGGTACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546292.2
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TGCCCAGCCACTGAGGACCTGGCAACGCAGCTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAGATCCAGCACGCAGTGCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CPATEDLATQLLLLS*VLSRAQIQHAVLLE
Trigger: TTCCAAGAGCACTGCGTGCTGGATCTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546213.5
CDS-3UTR CAA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCATCGTCTGCGGACACTaGGGACCAGTCACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSIVCGH*GPVTEG
Trigger: CCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGAT...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCATCGTCTGCGGACACTaGGGACCAGTCACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCIVCGH*GPVTEG
Trigger: CCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGAT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGAAGGAGCAATGCTGGTaGCATCAACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: VQTSPALQLKGSHSRIREKEQCW*HQLPQL
Trigger: CAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCTT...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAAGGACGAAGCCCGGATaGCATTCACAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RWRISRLHTQASPVTNFTRTKPG*HSQAST
Trigger: CGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCT...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGCTGGCACAGATAGATACCATCCTGTaGGCCACAGAACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPALQLKGSHSRIRELAQIDTIL*ATELLG
Trigger: GCCCAGGAGTTCTGTGGCCAACAGGATGGTATCTAT...CTGTGCCAGCTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCCCCCCGCGGTTCTCGTaGGTGGCGCTCACAACAAAA +
Preference number: 5 (lower is better)
Translates to: WRISRLHTQASPVTNFTLPPRFS*VALTTK
Trigger: TTTTGTTGTGAGCGCCACCAACGAGAACCGCGGGGG...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCACCCGTCGTAGCGAACTaGGAGCCCAAAGTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSPVVAN*EPKVRV
Trigger: TACACGAACTTTGGGCTCCAAGTTCGCTACGACGGG...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGTCGGGGCGCAGGTaGTCATCCAAGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SPVTNFTLAGEGGSLLPTLSGRR*SSKLLL
Trigger: CAACAACAGCTTGGATGACAACCTGCGCCCCGACAG...TGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTTGGCAGCTGGAGGGCTaGCCACCCACAAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: NFTLAGEGGSLLPTLPVIWQLEG*PPTRKQ
Trigger: CTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCCA...AATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGGGCAGTCCCTCGGGTaGTTTATGCTGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WRISRLHTQASPVTNFTLGQSLG*FMLLQV
Trigger: CACCTGCAGCAGCATAAACAACCCGAGGGACTGCCC...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGCACAGGGCAGTGCTTaGGGGCAGTCCCTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSAQGSA*GQSLGL
Trigger: CAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTGC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCTGGAAGCAGGTGATGTaGTTGTGGACGGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TGFLESSLGCGSPGCRPPWKQVM*LWTEQV
Trigger: CACCTGCTCCGTCCACAACAACATCACCTGCTTCCA...GGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGCCCAGCATATCTGGTaGGGTTTGCAGGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPAQHIW*GLQVLW
Trigger: CCAGAGCACCTGCAAACCCAACCAGATATGCTGGGC...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGCCCGTCAAACTTGACTaGCACCCCGATCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: QPWVWFPRVQTSPALQLKPVKLD*HPDLDV
Trigger: AACATCAAGATCGGGGTGCAAGTCAAGTTTGACGGG...CTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCCAATTGCTGTTGCTGTaGTCGGAAGTGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VTASSTTTTGTSSPSRTPQLLLL*SEVSWQ
Trigger: CTGCCAGCTCACTTCCGACAACAGCAACAGCAATTG...GGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACGAGACACAATTGCTGTaGCTGTTGTCGGAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: VWFPRVQTSPALQLKGSHETQLL*LLSEVS
Trigger: GCTCACTTCCGACAACAGCAACAGCAATTGTGTCTC...GTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTGGGAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAAGCTCCTCTTGCTCTCTaGGGTCCTGAGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: FWEVAHLEAPYTGLPRNQAPLAL*GPEQST
Trigger: TGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGC...TTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGCTCCTCTTGCTCTCTaGGGTCCTGAGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGAPLAL*GPEQST
Trigger: TGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp TGGCCAAGGGGCACGCAGGAGGTTCCACTCAAGATGTGGCCTTTCTaGCATTCACAGCTCTCAGCACAGGGCAGTGCTTTGGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: WPRGTQEVPLKMWPF*HSQLSAQGSALGQS
Trigger: GGACTGCCCCAAAGCACTGCCCTGTGCTGAGAGCTGTGAATGTCAGAAAGGCCACATCTTGAGTGGAACCTCCTGCGTGCCCCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp GGGCCCAGCATATCTGGTTGGGTTTGCAGGTGCTCTGGAAGCAGGTaGTGTTGTTGTGGACGGAGCAGGTGCAGAGCCTGGTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GPSISGWVCRCSGSR*CCCGRSRCRAWCRC
Trigger: ACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATATGCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp GGAGTGCGTCCTCGGTCTTCACCTCCCAGCTGTTGCCAAAGGTGTTaGGGTTCTGGGTCAGGGCGCCACTGGGCAGCATCATGTCATTCT +
Preference number: 5 (lower is better)
Translates to: GVRPRSSPPSCCQRC*GSGSGRHWAASCHS
Trigger: AGAATGACATGATGCTGCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAAGACCGAGGACGCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 90 bp TCTGCCAGGTTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTaGTATATGGTACCTGCTGGACACTCCATGGCGCAGAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: SARLAQDAGQGVIQL*YMVPAGHSMAQRVR
Trigger: CCGCACCCTCTGCGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAACCTGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000620868.4
CDS GCA 90 bp CCGTCTGCCAGCTGTTCCCCAGCTCCTCCTTGTCTCCTGCTGGGCTaGCGTCCAACTTCAGGTGGTCATTGTCACTGTTGCCGTCATAGT +
Preference number: 5 (lower is better)
Translates to: PSASCSPAPPCLLLG*RPTSGGHCHCCRHS
Trigger: ACTATGACGGCAACAGTGACAATGACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAGCTGGGGAACAGCTGGCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp GGCCATGAGTGTCGACCAGCCGTCCACAGAACCCTGGCCCCGACATaGTGCTCTGCAGAGATGAATCACAAGACGGGGAATTCACCACCT +
Preference number: 5 (lower is better)
Translates to: GHECRPAVHRTLAPT*CSAEMNHKTGNSPP
Trigger: AGGTGGTGAATTCCCCGTCTTGTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAGGGTTCTGTGGACGGCTGGTCGACACTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp TCCTGGCAGGTGGTGGTCATGGTGGACATGTGTGTGCACAGCAGGTaGTGCAGCCCCTGGAATCCGCACATATCAAGCATGCAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SWQVVVMVDMCVHSR*CSPWNPHISSMQLS
Trigger: CGACAGCTGCATGCTTGATATGTGCGGATTCCAGGGGCTGCAGCACCTGCTGTGCACACACATGTCCACCATGACCACCACCTGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp AAACCGCCCGCTTGCACCCAGGAAGACGCCTTTAGAGGGTATGGCTaGGAGAGTAACTTGCTGACCCCCAACCAGAGTGCGTCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: KPPACTQEDAFRGYG*ESNLLTPNQSASAL
Trigger: AAGGGCAGACGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCCATACCCTCTAAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CAGGTTCAGAGGATTCAGGTAACTTCCAGGCGGCCCCCAGCTGCATaGAATCGCCTGCAAGCTTTCTGTCGGGGCGCAGGTTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: QVQRIQVTSRRPPAA*NRLQAFCRGAGCHP
Trigger: TGGATGACAACCTGCGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTGGAAGTTACCTGAATCCTCTGAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CCTGAGGCCCGACAATGGAGCAGCCCATCCAGGGCCCAGCATATCTaGTTGGGTTTGCAGGTGCTCTGGAAGCAGGTGATGTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: PEARQWSSPSRAQHI*LGLQVLWKQVMLLW
Trigger: CCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATATGCTGGGCCCTGGATGGGCTGCTCCATTGTCGGGCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GTCGGCCGCCCTGCAGTTTCCACTCGGGTTCTCCTGCTGTTCCGCTaGAATCTGCTGCTCATCTACCAGGAGACTCTGACAACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: VGRPAVSTRVLLLFR*NLLLIYQETLTTWV
Trigger: GACCCAAGTTGTCAGAGTCTCCTGGTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGGAAACTGCAGGGCGGCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TCCATGGCCACTGAGGACCTGGCAACGCAGCTCCTCTTGCTCTCTTaGGTCCTGAGCAGAGCACAGATCCAGCACGCAGTGCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: SMATEDLATQLLLLS*VLSRAQIQHAVLLE
Trigger: TTCCAAGAGCACTGCGTGCTGGATCTGTGCTCTGCTCAGGACCCAAGAGAGCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGCCATGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613979.5
ENST00000618565.4
CDS-3UTR CAA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCAGTCACAGAGGGGTTaGGCGTCATCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: KAALGVVPQGADLPRSAAQSQRG*ASSSKS
Trigger: TGATTTTGAGGATGACGCCAAACCCCTCTGTGACTG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGAACAAAAAGCCAGGGTaGCAGACACAGCCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRNKKPG*QTQPSR
Trigger: TCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGTT...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGACACGGGCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCAGACGCACAACTCTTaGCAGCCTGGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: QTRAFWKAALGVVPQGADQTHNS*QPGLYH
Trigger: GTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCTG...GTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGCCCGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCAGACGCACAACTCTTaGCAGCCTGGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPQTHNS*QPGLYH
Trigger: GTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCTG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGCGAATTCTGTTGTaGCTTTCACAGACGCACAAC +
Preference number: 5 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQQRILL*LSQTHN
Trigger: GTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCTG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGTGAGTGGCAGCGAATTCTGTaGTTGCTTTCACAGACGCAC +
Preference number: 5 (lower is better)
Translates to: VQTSPALQLKGSHSRIREWQRIL*LLSQTH
Trigger: GTGCGTCTGTGAAAGCAACAACAGAATTCGCTGCCA...CTCACGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCCCCGTCGTAGCGAACTaGGAGCCCAAAGTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGPVVAN*EPKVRV
Trigger: TACACGAACTTTGGGCTCCAAGTTCGCTACGACGGG...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGGCAGCTGGAGGGCTaGCCACCCACAAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVWQLEG*PPTRKQ
Trigger: CTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCCA...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTAAGCAGGTGATGTTGTaGTGGACGGAGCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAKQVML*WTEQVQ
Trigger: CTGCACCTGCTCCGTCCACAACAACATCACCTGCTT...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGAAGCAGGTGATGTTGTaGTGGACGGAGCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: TQASPVTNFTLAGEGGSLKQVML*WTEQVQ
Trigger: CTGCACCTGCTCCGTCCACAACAACATCACCTGCTT...CAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGTGGAAGCAGGTGATGTaGTTGTGGACGGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLVTASSTTTTGTSSPSRWKQVM*LWTEQV
Trigger: CACCTGCTCCGTCCACAACAACATCACCTGCTTCCA...CCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCCCGTCAAACTTGACTaGCACCCCGATCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRPVKLD*HPDLDV
Trigger: AACATCAAGATCGGGGTGCAAGTCAAGTTTGACGGG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGATTCACTGTCACTATTaGCTACTTCATCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ALGVVPQGADLPRSAAEGIHCHY*LLHRWA
Trigger: TGCCCAGCGATGAAGTAGCAAATAGTGACAGTGAAT...CCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGGAGACACAATTGCTGTaGCTGTTGTCGGAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ASSTTTTGTSSPSRTPTRETQLL*LLSEVS
Trigger: GCTCACTTCCGACAACAGCAACAGCAATTGTGTCTC...CCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCATAGGTCATGCGGCCTaGCAAGCGGTAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSIGHAA*QAVAEA
Trigger: GGCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTATAGGTCATGCGGCCTaGCAAGCGGTAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTIGHAA*QAVAEA
Trigger: GGCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTGCCATCTTCTGGTTGTaGACCACAAGCTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: PVVRPPQAPAVPVGRPPGAIFWL*TTSSRP
Trigger: TGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGGC...ACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGTTGCCAAAGGTGTaGAGGTTCTGGGTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSLLPKV*RFWVRA
Trigger: CGCCCTGACCCAGAACCTCAACACCTTTGGCAACAG...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCACCTCCCAGCTGTaGCCAAAGGTGTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: PTSHSQVKVAPCSRHCPSFTSQL*PKVLRF
Trigger: GAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAA...TGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp GAACTTGGAGCCCAAAGTTCGTGTAGAGGAGGACGAGGTTGCTGCTaGGCCTTATGGTCACCCGGCCTTGTGCAAGCCACACAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: ELGAQSSCRGGRGCC*ALWSPGLVQATQVG
Trigger: CCCTACCTGTGTGGCTTGCACAAGGCCGGGTGACCATAAGGCTCAGCAGCAACCTCGTCCTCCTCTACACGAACTTTGGGCTCCAAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 90 bp CATGAGTGTCGACCAGCCGTCCACAGAACCCTGGCCCCGACATGCTaGTCTGCAGAGATGAATCACAAGACGGGGAATTCACCACCTGGT +
Preference number: 5 (lower is better)
Translates to: HECRPAVHRTLAPTC*SAEMNHKTGNSPPG
Trigger: ACCAGGTGGTGAATTCCCCGTCTTGTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAGGGTTCTGTGGACGGCTGGTCGACACTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TGTGGCCTTTCTGACATTCACAGCTCTCAGCACAGGGCAGTGCTTTaGGGCAGTCCCTCGGGTTGTTTATGCTGCTGCAGGTGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: CGLSDIHSSQHRAVL*GSPSGCLCCCRCLG
Trigger: GCCCAGACACCTGCAGCAGCATAAACAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTGCTGAGAGCTGTGAATGTCAGAAAGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGTTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTGATATATaGTACCTGCTGGACACTCCATGGCCACTGAGGACCTGGCAACGC +
Preference number: 5 (lower is better)
Translates to: GWHRMLGRVSYSSDI*YLLDTPWPLRTWQR
Trigger: GCGTTGCCAGGTCCTCAGTGGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613979.5
ENST00000618565.4
CDS-3UTR CAA 90 bp CAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCAGGATCCGAGTCACAGAGGTCATTaGGAATGTCAAAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: QGADLPRSAAEGLTQQDPSHRGH*ECQSCM
Trigger: CATGCAGCTTTGACATTCCAAATGACCTCTGTGACT...CGGATCCTGCTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAAAGGAGCAATGCTGGTaGCATCAACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGKEQCW*HQLPQL
Trigger: CAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCTT...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAAACAAAAAGCCAGGGTaGCAGACACAGCCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: RISRLHTQASPVTNFTLANKKPG*QTQPSR
Trigger: TCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGTT...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGCAGCGAATTCTGTTGTaGCTTTCACAGACGCACAAC +
Preference number: 5 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRQRILL*LSQTHN
Trigger: GTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCTG...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCCCGTCGTAGCGAACTaGGAGCCCAAAGTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCPVVAN*EPKVRV
Trigger: TACACGAACTTTGGGCTCCAAGTTCGCTACGACGGG...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTCACCACCTGGTGACATaGAGAGAAGGGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPHHLVT*REGSLR
Trigger: CCTCAGGGACCCTTCTCTCAATGTCACCAGGTGGTG...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCAAGCAGGTGATGTTGTaGTGGACGGAGCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: WRISRLHTQASPVTNFTLKQVML*WTEQVQ
Trigger: CTGCACCTGCTCCGTCCACAACAACATCACCTGCTT...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCCCAGCATATCTGGTaGGGTTTGCAGGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPAQHIW*GLQVLW
Trigger: CCAGAGCACCTGCAAACCCAACCAGATATGCTGGGC...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACTGCTTGGCACTGATCTaGAAGAAGGGCAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: EVAHLEAPYTGLPRNQLHCLALI*KKGKAM
Trigger: CATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCA...GTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCACTCACAGAGGGTGTTaGCACAGTCCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCTHRGC*HSPPGR
Trigger: CCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAGT...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTGGGCGGATCCATCTaGTTGCGTCCTTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSLGGSI*LRPSTR
Trigger: CCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAG...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCAAGCTCCAGACCAGCTaGGAGCTGCACTTTATAGCC +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGKLQTS*ELHFIA
Trigger: GGCTATAAAGTGCAGCTCCAAGCTGGTCTGGAGCTT...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGCCATCTTCTGGTTGTaGACCACAAGCTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDAAIFWL*TTSSRP
Trigger: TGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGGC...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTCTGTTGCCAAAGGTGTaGAGGTTCTGGGTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFLLPKV*RFWVRA
Trigger: CGCCCTGACCCAGAACCTCAACACCTTTGGCAACAG...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAGCTACATTCGGACACTaGGAGGCCCGTGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPATFGH*EARAEA
Trigger: GGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGC...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp TCTGCCAGGTTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTaGTATATGGTACCTGCTGGACACTCCATGGCCACTGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: SARLAQDAGQGVIQL*YMVPAGHSMATEDL
Trigger: CAGGTCCTCAGTGGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAACCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613979.5
ENST00000618565.4
CDS CCA 90 bp GGAGGTTGTGGTAGTGCCCAGAATCACACTGGTCATAGGGGTACTTaGAGCATGTGGAGACATCACCAAGGCTGCCAGCCCAGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GGCGSAQNHTGHRGT*SMWRHHQGCQPSGC
Trigger: ACAGCCACTGGGCTGGCAGCCTTGGTGATGTCTCCACATGCTCCAAGTACCCCTATGACCAGTGTGATTCTGGGCACTACCACAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CACAGTTCTTGTTCCAGGCGTCTGCCATGCTGTTCTCCTGGCAGCTaGAGGGCTTGCCACCCACAAGGAAACAGCCAGGTTCAGAGGATT +
Preference number: 5 (lower is better)
Translates to: HSSCSRRLPCCSPGS*RACHPQGNSQVQRI
Trigger: AATCCTCTGAACCTGGCTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCCAGGAGAACAGCATGGCAGACGCCTGGAACAAGAACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp TCATGCTTGGCACTGATCTTGAAGAAGGGCAAGGCCATGGCGGGGTaGCACACTTTCACCAGGACAAGAGTGCAGGCGTCCGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: SCLALILKKGKAMAG*HTFTRTRVQASGIE
Trigger: TTCTATCCCGGACGCCTGCACTCTTGTCCTGGTGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp GCTTTCTGGAAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCGTCAAAGCTGCATGTTaGCATCATACAGACGCGATT +
Preference number: 5 (lower is better)
Translates to: AFWKAALGVVPQGADLPRVKAAC*HHTDAI
Trigger: AATCGCGTCTGTATGATGCAAACATGCAGCTTTGAC...GCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTTCCAGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGCAGACACGGAGTCACAGAGGTCATTaGGAATGTCAAAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: GSLLPTLPVILTGVLQTRSHRGH*ECQSCM
Trigger: CATGCAGCTTTGACATTCCAAATGACCTCTGTGACT...CCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCACTAGGCCTGGGGCTCTaGCACGAAGCAGGACAAGCA +
Preference number: 5 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQALGLGL*HEAGQA
Trigger: TGCTTGTCCTGCTTCGTGCAAGAGCCCCAGGCCTAG...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTGGCTGGGAGAGTAACTaGCTGACCCCCAACCAGAGT +
Preference number: 5 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSGWESN*LTPNQS
Trigger: ACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCC...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGCACACAGGGAGTACTaGCTGTTGGGCGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVAHREY*LLGGQA
Trigger: GGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCTCTTTGCAGCCTGGCTaGTACCACCGCTCCCCTACC +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGSLQPG*YHRSPT
Trigger: GGTAGGGGAGCGGTGGTACAAGCCAGGCTGCAAAGA...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCAGCGAATTCTGTTGTaGCTTTCACAGACGCACAAC +
Preference number: 5 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTQRILL*LSQTHN
Trigger: GTTGTGCGTCTGTGAAAGCAACAACAGAATTCGCTG...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCTGGCAGCGAATTCTGTaGTTGCTTTCACAGACGCAC +
Preference number: 5 (lower is better)
Translates to: AHLEAPYTGLPRNQLHTRWQRIL*LLSQTH
Trigger: GTGCGTCTGTGAAAGCAACAACAGAATTCGCTGCCA...GCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTCACCACCTGGTGACATaGAGAGAAGGGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSHHLVT*REGSLR
Trigger: CCTCAGGGACCCTTCTCTCAATGTCACCAGGTGGTG...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGGGCAGTCCCTCGGGTaGTTTATGCTGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGGQSLG*FMLLQV
Trigger: CACCTGCAGCAGCATAAACAACCCGAGGGACTGCCC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTTGCTTGGCACTGATCTaGAAGAAGGGCAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTCLALI*KKGKAM
Trigger: CATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCA...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGTGGCCCCGTCAAACTTGACTaGCACCCCGATCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: SSPSRTPTRLDAGFLGGGPVKLD*HPDLDV
Trigger: AACATCAAGATCGGGGTGCAAGTCAAGTTTGACGGG...GCCACCTCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTGAAGGGCTCACACAGCCTTTCCATAGTAGGTaGTGGGGATTTCAATCTCTA +
Preference number: 5 (lower is better)
Translates to: VVPQGADLPRSAAEGLTQPFHSR*WGFQSL
Trigger: TAGAGATTGAAATCCCCACAACCTACTATGGAAAGG...CTGTGTGAGCCCTTCAGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTACTCACAGAGGGTGTTaGCACAGTCCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPTHRGC*HSPPGR
Trigger: CCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAGT...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGGAGCATTGTTCAGACTaGTCTGAGACACAATTGCTG +
Preference number: 5 (lower is better)
Translates to: ASPVTNFTLAGEGGSLLPEHCSD*SETQLL
Trigger: CAGCAATTGTGTCTCAGACAAGTCTGAACAATGCTC...CGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCAAGCTCCAGACCAGCTaGGAGCTGCACTTTATAGCC +
Preference number: 5 (lower is better)
Translates to: WRISRLHTQASPVTNFTLKLQTS*ELHFIA
Trigger: GGCTATAAAGTGCAGCTCCAAGCTGGTCTGGAGCTT...GAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS CCA 90 bp CCCACAAGGAGCAATGCTGGTTGCATCAACTGCCACAGCTGGCTCTaGGGTCTTTCCAAAAACGCCTACCACGGCAAACTGTATCCGTCC +
Preference number: 5 (lower is better)
Translates to: PTRSNAGCINCHSWL*GLSKNAYHGKLYPS
Trigger: GGACGGATACAGTTTGCCGTGGTAGGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCTTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp ATCTGGTTGGGTTTGCAGGTGCTCTGGAAGCAGGTGATGTTGTTGTaGACGGAGCAGGTGCAGAGCCTGGTGCAGGTGTTCTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: IWLGLQVLWKQVMLL*TEQVQSLVQVFSVY
Trigger: GTACACAGAGAACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCCCCGCGGTTCTCGTaGGTGGCGCTCACAACAAAA +
Preference number: 5 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPPPRFS*VALTTK
Trigger: TTTTGTTGTGAGCGCCACCAACGAGAACCGCGGGGG...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCTCTTGGAAGCAGGTGATGTaGTTGTGGACGGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SICVHQPGQSVSLLRFLSWKQVM*LWTEQV
Trigger: CACCTGCTCCGTCCACAACAACATCACCTGCTTCCA...AGAGAGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAGCAGCCTTGGGTGTGGTTCCCCAGGGTGCAGACCTCCCCCGCTCTGCAGCTCCTTTCCATAGTAGGTaGTGGGGATTTCAATCTCTA +
Preference number: 5 (lower is better)
Translates to: KAALGVVPQGADLPRSAAPFHSR*WGFQSL
Trigger: TAGAGATTGAAATCCCCACAACCTACTATGGAAAGG...AGCTGCAGAGCGGGGGAGGTCTGCACCCTGGGGAACCACACCCAAGGCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGGGAGACTCTGACAACTaGGGTCAATGTCCTTATCTT +
Preference number: 5 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLGDSDN*GQCPYL
Trigger: AAGATAAGGACATTGACCCAAGTTGTCAGAGTCTCC...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACGGTGGCCCCGAAGGCTaGCAGAGCCTGGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNGGPEG*QSLAEG
Trigger: GCCCTCTGCCAGGCTCTGCAAGCCTTCGGGGCCACC...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCATTGTCTGAGACACAATaGCTGTTGCTGTTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: SRPVVRPPQAPAVPVGRPLSETQ*LLLLSE
Trigger: TTCCGACAACAGCAACAGCAATTGTGTCTCAGACAA...TGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTGACAGGGGTTCTGTTGTCTGAGACACAATaGCTGTTGCTGTTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: GEGGSLLPTLPVILTGVLLSETQ*LLLLSE
Trigger: TTCCGACAACAGCAACAGCAATTGTGTCTCAGACAA...CAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTACGGCCATCTTCTGGTaGTTGACCACAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HSPEQYLCPPAWPVCLPPTAIFW*LTTSSR
Trigger: TCTGGAGCTTGTGGTCAACAACCAGAAGATGGCCGT...AGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp GGCCACCCGATGGCCATTCAGCATGACCTTACAGCCTCTGAGCAGTaGGATGCTGAGGTCAAAGACTGTCACGTGGACGGCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: GHPMAIQHDLTASEQ*DAEVKDCHVDGFDV
Trigger: TACATCAAAGCCGTCCACGTGACAGTCTTTGACCTCAGCATCTCACTGCTCAGAGGCTGTAAGGTCATGCTGAATGGCCATCGGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp CAGAGTTTGCCAGAGTATGTGCTGGACACAGTAACATACAGCTGCTaGTCACCATCCCATCTCACCCGCAAACCGAACTCCGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QSLPEYVLDTVTYSC*SPSHLTRKPNSVCS
Trigger: GCTGCAGACGGAGTTCGGTTTGCGGGTGAGATGGGATGGTGACCAGCAGCTGTATGTTACTGTGTCCAGCACATACTCTGGCAAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GCGAATTCTGTTGTTGCTTTCACAGACGCACAACTCTTTGCAGCCTaGCTTGTACCACCGCTCCCCTACCTTGAAGTAGCTGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ANSVVAFTDAQLFAA*LVPPLPYLEVAACR
Trigger: CCTGCAGGCAGCTACTTCAAGGTAGGGGAGCGGTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCTGTGAAAGCAACAACAGAATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp CTGGTCACGGCCAGTAGTACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGGAAACTGTAGGTTTCTaGGTGGAGATTGTAGGGTTT +
Preference number: 5 (lower is better)
Translates to: LVTASSTTTTGTSSPSRTETVGF*VEIVGF
Trigger: AAACCCTACAATCTCCACCAAGAAACCTACAGTTTC...CGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGTACTACTGGCCGTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCGCCTGGATGCAGTGGTaGTCACTAAACAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: HTQASPVTNFTLAGEGGSAWMQW*SLNKKP
Trigger: TGGCTTTTTGTTTAGTGACAACCACTGCATCCAGGC...GGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGCCTGGATGCAGTGGTaGTCACTAAACAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: QSRTVSVSTSLASLSPSCAWMQW*SLNKKP
Trigger: TGGCTTTTTGTTTAGTGACAACCACTGCATCCAGGC...GCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTCGCAGCCTGGATGCAGTGGTaGTCACTAAACAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: RISRLHTQASPVTNFTLAAWMQW*SLNKKP
Trigger: TGGCTTTTTGTTTAGTGACAACCACTGCATCCAGGC...TGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCAGGGAGTACTTGCTGTaGGGCGGGCAGGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAREYLL*GGQAIG
Trigger: CCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCT...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGGGAGGGTGACCTGTTaGCTGTTGATTAGCACACGG +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGGRVTC*LLISTR
Trigger: CCGTGTGCTAATCAACAGCAAACAGGTCACCCTCCC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTGGCTTTCTGGGAGGAGACTCTGACAACTaGGGTCAATGTCCTTATCTT +
Preference number: 5 (lower is better)
Translates to: GTSSPSRTPTRLDAGFLGGDSDN*GQCPYL
Trigger: AAGATAAGGACATTGACCCAAGTTGTCAGAGTCTCC...TCCCAGAAAGCCAGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAACTCACAGAGGGTGTTaGCACAGTCCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPTHRGC*HSPPGR
Trigger: CCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAGT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTGAGACACAATTGCTGTaGCTGTTGTCGGAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SRTVSVSTSLASLSPSCVETQLL*LLSEVS
Trigger: GCTCACTTCCGACAACAGCAACAGCAATTGTGTCTC...AACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp ACGACCACCACAGGCACCAGCAGTCCCAGTAGGACGCCCACCAGGTTAGATGCTTTGTCTGAGACACAATaGCTGTTGCTGTTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: TTTTGTSSPSRTPTRLDALSETQ*LLLLSE
Trigger: TTCCGACAACAGCAACAGCAATTGTGTCTCAGACAA...AGCATCTAACCTGGTGGGCGTCCTACTGGGACTGCTGGTGCCTGTGGTGGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTTCTCAGTCACAGAGGGGTTaGGCGTCATCCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: EQYLCPPAWPVCLPPAFSQSQRG*ASSSKS
Trigger: TGATTTTGAGGATGACGCCAAACCCCTCTGTGACTG...AGAAAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCGCAGGTGGCGGCACCTaGGGCATGGCAGCCATAGAT +
Preference number: 5 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVAGGGT*GMAAID
Trigger: ATCTATGGCTGCCATGCCCAAGGTGCCGCCACCTGC...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACGCACAGGGCAGTGCTTaGGGGCAGTCCCTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNAQGSA*GQSLGL
Trigger: CAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTGC...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTAACCAACTTCACACTCGCAGGTGAAGGTGGCTCCCTGCTCCCGACACTGCCCCCTTTCCATAGTAGGTaGTGGGGATTTCAATCTCTA +
Preference number: 5 (lower is better)
Translates to: VTNFTLAGEGGSLLPTLPPFHSR*WGFQSL
Trigger: TAGAGATTGAAATCCCCACAACCTACTATGGAAAGG...GGGCAGTGTCGGGAGCAGGGAGCCACCTTCACCTGCGAGTGTGAAGTTGGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACACTATTCACTGTCACTATTaGCTACTTCATCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VAHLEAPYTGLPRNQLHTIHCHY*LLHRWA
Trigger: TGCCCAGCGATGAAGTAGCAAATAGTGACAGTGAAT...AGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AGGTGGCGCATCTCGAGGCTCCATACACAGGCCTCCCCCGTAACCAACTTCACAGAGCATTGTTCAGACTaGTCTGAGACACAATTGCTG +
Preference number: 5 (lower is better)
Translates to: RWRISRLHTQASPVTNFTEHCSD*SETQLL
Trigger: CAGCAATTGTGTCTCAGACAAGTCTGAACAATGCTC...TGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCTCGAGATGCGCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCCAACGGCCATCTTCTGGTaGTTGACCACAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EQLNRHSPEQYLCPPAWPTAIFW*LTTSSR
Trigger: TCTGGAGCTTGTGGTCAACAACCAGAAGATGGCCGT...TGGCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCACGGCCATCTTCTGGTaGTTGACCACAAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGTAIFW*LTTSSR
Trigger: TCTGGAGCTTGTGGTCAACAACCAGAAGATGGCCGT...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACCAGCACGCAGTGCTCTaGGAAGGGCTCTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNQHAVL*EGLWGH
Trigger: GTGGCCCCAGAGCCCTTCCAAGAGCACTGCGTGCTG...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS GCA 90 bp TTGGGATCCAGGTCCAGTCACAGAGGTCATTTGGAATGTCAAAGCTaGATGTTTGCATCATACAGACGCGATTACAGGAGCCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: LGSRSSHRGHLECQS*MFASYRRDYRSPGG
Trigger: TCCGCCGGGGCTCCTGTAATCGCGTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 90 bp GGCCCCGGAGGCAGTTGGGATCCAGGTCCAGTCACAGAGGTCATTTaGAATGTCAAAGCTGCATGTTTGCATCATACAGACGCGATTACA +
Preference number: 5 (lower is better)
Translates to: GPGGSWDPGPVTEVI*NVKAACLHHTDAIT
Trigger: TGTAATCGCGTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAAAGGAGCAATGCTGGTaGCATCAACTGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRKEQCW*HQLPQL
Trigger: CAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCTT...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCTAGGCCTGGGGCTCTaGCACGAAGCAGGACAAGCA +
Preference number: 5 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVLGLGL*HEAGQA
Trigger: TGCTTGTCCTGCTTCGTGCAAGAGCCCCAGGCCTAG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAAACAAAAAGCCAGGGTaGCAGACACAGCCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVNKKPG*QTQPSR
Trigger: TCGGGAGGGCTGTGTCTGCAACCCTGGCTTTTTGTT...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCATGGCAGCGAATTCTGTaGTTGCTTTCACAGACGCAC +
Preference number: 5 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQAWQRIL*LLSQTH
Trigger: GTGCGTCTGTGAAAGCAACAACAGAATTCGCTGCCA...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp GACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCCCCCGCGGTTCTCGTaGGTGGCGCTCACAACAAAA +
Preference number: 5 (lower is better)
Translates to: DSSKLSNLTGTVQNSICVPPRFS*VALTTK
Trigger: TTTTGTTGTGAGCGCCACCAACGAGAACCGCGGGGG...GACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGGCAGAGGGGACTTaGGCGCCCTCACACCGGCCA +
Preference number: 5 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVQAEGT*APSHRP
Trigger: TGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCTG...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CCAGAACAGTATCTGTGTCCACCAGCCTGGCCAGTCTGTCTCCCTCCTGCGTTTGAAACTGTAGGTTTCTaGGTGGAGATTGTAGGGTTT +
Preference number: 5 (lower is better)
Translates to: PEQYLCPPAWPVCLPPAFETVGF*VEIVGF
Trigger: AAACCCTACAATCTCCACCAAGAAACCTACAGTTTC...AAACGCAGGAGGGAGACAGACTGGCCAGGCTGGTGGACACAGATACTGTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCTGGCGTCAAAGCTGCATGTTaGCATCATACAGACGCGATT +
Preference number: 5 (lower is better)
Translates to: LSNLTGTVQNSICVHQPGVKAAC*HHTDAI
Trigger: AATCGCGTCTGTATGATGCAAACATGCAGCTTTGAC...GCCAGGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCACCACAGGCAAGTCACAGAGGTCATTaGGAATGTCAAAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: SFCKCTLWSRPVVRPPQASHRGH*ECQSCM
Trigger: CATGCAGCTTTGACATTCCAAATGACCTCTGTGACT...TGCCTGTGGTGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCCAATTGCTGTTGCTGTaGTCGGAAGTGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAQLLLL*SEVSWQ
Trigger: CTGCCAGCTCACTTCCGACAACAGCAACAGCAATTG...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp AAAACTGAGCAACTTAACAGGCACAGTCCAGAACAGTATCTGTGTCCACCAGCCGCCATCTTCTGGTTGTaGACCACAAGCTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: KTEQLNRHSPEQYLCPPAAIFWL*TTSSRP
Trigger: TGGTCTGGAGCTTGTGGTCAACAACCAGAAGATGGC...GGCTGGTGGACACAGATACTGTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS TCA 90 bp CTACTTCATCGCTGGGCATCATTAGTTCGTCCTCTTCCTCATCATTaGAGTTCCCACACATGCCGCAGACCTTTCCATAGTAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLHRWASLVRPLPHH*SSHTCRRPFHSRLW
Trigger: CCACAACCTACTATGGAAAGGTCTGCGGCATGTGTGGGAACTTCAATGATGAGGAAGAGGACGAACTAATGATGCCCAGCGATGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS-3UTR CAA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAGTCAAAGCTGCATGTTaGCATCATACAGACGCGATT +
Preference number: 5 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPVKAAC*HHTDAI
Trigger: AATCGCGTCTGTATGATGCAAACATGCAGCTTTGAC...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGACCAGAGCATTGTTCAGACTaGTCTGAGACACAATTGCTG +
Preference number: 5 (lower is better)
Translates to: SSSSFCKCTLWSRPVVRPEHCSD*SETQLL
Trigger: CAGCAATTGTGTCTCAGACAAGTCTGAACAATGCTC...TGGTCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp CTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTACGAGAAACTGTAGGTTTCTaGGTGGAGATTGTAGGGTTT +
Preference number: 5 (lower is better)
Translates to: LSSSSFCKCTLWSRPVVRETVGF*VEIVGF
Trigger: AAACCCTACAATCTCCACCAAGAAACCTACAGTTTC...TCGTACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TCTCTCTCTTCCTCCTCGTTCTGTAAATGCACTCTCTGGTCACGGCCAGTAGTAGGAGACTCTGACAACTaGGGTCAATGTCCTTATCTT +
Preference number: 5 (lower is better)
Translates to: SLSSSSFCKCTLWSRPVVGDSDN*GQCPYL
Trigger: AAGATAAGGACATTGACCCAAGTTGTCAGAGTCTCC...TACTACTGGCCGTGACCAGAGAGTGCATTTACAGAACGAGGAGGAAGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACTTCACCTCCCAGCTGTaGCCAAAGGTGTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNFTSQL*PKVLRF
Trigger: GAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAA...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTAATCTTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCATAGATACCATCCTGTaGGCCACAGAACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LIFLSEDSSKLSNLTGTVIDTIL*ATELLG
Trigger: GCCCAGGAGTTCTGTGGCCAACAGGATGGTATCTAT...GACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS-3UTR CAA 90 bp TTCTTGTCTGAAGACAGCTCAAAACTGAGCAACTTAACAGGCACAGTCCAGAACATTCACTGTCACTATTaGCTACTTCATCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FLSEDSSKLSNLTGTVQNIHCHY*LLHRWA
Trigger: TGCCCAGCGATGAAGTAGCAAATAGTGACAGTGAAT...GTTCTGGACTGTGCCTGTTAAGTTGCTCAGTTTTGAGCTGTCTTCAGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
CDS GCA 72 bp GGAGGCGCACTGGGCCCACACAGGAGCCCGGAGCGCTaGCTCGCACTTTTCCCGCGCCCTGCGGAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: GGALGPHRSPER*LALFPRPAEVG
Trigger: GCCGACCTCCGCAGGGCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTCCTGTGTGGGCCCAGTGCGCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GAGCCCGGAGCGCTGCCTCGCACTTTTCCCGCGCCCTaGGGAGGTCGGCCGCCCTGCAGTTTCCACTCGGGT +
Preference number: 6 (lower is better)
Translates to: EPGALPRTFPAP*GGRPPCSFHSG
Trigger: ACCCGAGTGGAAACTGCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGTGCGAGGCAGCGCTCCGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp ACCAGGAAGGGCGTGAGGTCTATGCGGGAGGCGCACTaGGCCCACACAGGAGCCCGGAGCGCTGCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: TRKGVRSMREAH*AHTGARSAASH
Trigger: GTGCGAGGCAGCGCTCCGGGCTCCTGTGTGGGCCCAGTGCGCCTCCCGCATAGACCTCACGCCCTTCCTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp CTGGGTGCTGTTGCTCGCCAGCTGCTCCGGGCTACATTCGGACACTaGGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTTGTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LGAVARQLLRATFGH*EARAEAQLRPLSLL
Trigger: GAGGAGGGACAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CGGGGGCCCCGGTGGAGCCGGTGGGAGAGGGCCCACTaGCTCGAACCCAGTCTTCATCGTCTGCGGACACTT +
Preference number: 6 (lower is better)
Translates to: RGPRWSRWERAH*LEPSLHRLRTL
Trigger: AAGTGTCCGCAGACGATGAAGACTGGGTTCGAGCCAGTGGGCCCTCTCCCACCGGCTCCACCGGGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GGGACGCGTAGGCCTGCAGGGAGCGGCACAGGGCTGTaGTGTCGCCCTTGGTCCCACACTGACCATGCACGC +
Preference number: 6 (lower is better)
Translates to: GTRRPAGSGTGL*CRPWSHTDHAR
Trigger: GCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCCTGTGCCGCTCCCTGCAGGCCTACGCGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp CACTTGGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTaGTCCCTCCTCCTCCGCTGGTATAGCCCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: HLEARAEAQLRP*SLLLRWYSPGE
Trigger: TTCCCCAGGGCTATACCAGCGGAGGAGGAGGGACAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GTTGCTCGCCAGCTGCTCCGGGCTACATTCGGACACTaGGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTTG +
Preference number: 6 (lower is better)
Translates to: VARQLLRATFGH*EARAEAQLRPL
Trigger: CAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp ACATTCGGACACTTGGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTaGTCCCTCCTCCTCCGCTGGTATAGCCCTGGGGAAGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TFGHLEARAEAQLRP*SLLLRWYSPGEAQE
Trigger: CTCCTGCGCTTCCCCAGGGCTATACCAGCGGAGGAGGAGGGACAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp AAGGGGCCCTGGGGGTCTGCCAGCACCCTACAGGCCTGGGTGCTGTaGCTCGCCAGCTGCTCCGGGCTACATTCGGACACTTGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: KGPWGSASTLQAWVL*LASCSGLHSDTWRP
Trigger: GGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp CGCACTTTTCCCGCGCCCTGCGGAGGTCGGCCGCCCTaGAGTTTCCACTCGGGTTCTCCTGCTGTTCCGCTG +
Preference number: 6 (lower is better)
Translates to: RTFPAPCGGRPP*SFHSGSPAVPL
Trigger: CAGCGGAACAGCAGGAGAACCCGAGTGGAAACTGCAGGGCGGCCGACCTCCGCAGGGCGCGGGAAAAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GGAGGCTCTGGGTGCCACTGTAGGCATAGCCTGGGATaGTGGCGCAGCCTTCCACGCAGGGGCCCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: GGSGCHCRHSLG*WRSLPRRGPRS
Trigger: ACTGCGAGGGCCCCTGCGTGGAAGGCTGCGCCAGCATCCCAGGCTATGCCTACAGTGGCACCCAGAGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542585.5
ENST00000613979.5
ENST00000618565.4
ENST00000620868.4
CDS CCA 72 bp TTGCTCGCCAGCTGCTCCGGGCTACATTCGGACACTTaGAGGCCCGTGCGGAGGCCCAGCTCCGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: LLASCSGLHSDT*RPVRRPSSAPC
Trigger: ACAAGGGGCGGAGCTGGGCCTCCGCACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp AAGGGGCCCTGGGGGTCTGCCAGCACCCTACAGGCCTaGGTGCTGTTGCTCGCCAGCTGCTCCGGGCTACAT +
Preference number: 6 (lower is better)
Translates to: KGPWGSASTLQA*VLLLASCSGLH
Trigger: ATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCCCCAGGGCCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GACAAATGCAGCCCTCAGCGCAGGCAGAGGGGACTTTaGCGCCCTCACACCGGCCATCCAGGTCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: DKCSPQRRQRGL*RPHTGHPGPSR
Trigger: CCTGCTGGGACCTGGATGGCCGGTGTGAGGGCGCCAAAGTCCCCTCTGCCTGCGCTGAGGGCTGCATTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GGGAAGGGCCAGGAGGAGACGTTCCAGTTCCATCCCTaGTCTGGCTCTCCTTGGCGCCTCTGCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GKGQEETFQFHP*SGSPWRLCSPG
Trigger: CCCTGGGGAGCAGAGGCGCCAAGGAGAGCCAGACCAGGGATGGAACTGGAACGTCTCCTCCTGGCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620868.4
CDS TCA 72 bp TGTCACCTGGGGCGCAGAAGGGCCGGCTCACCAGTCTaGCTGACTGGCCTGCCTGGGAGAACTCGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: CHLGRRRAGSPV*LTGLPGRTRQP
Trigger: AGGCTGACGAGTTCTCCCAGGCAGGCCAGTCAGTCAGACTGGTGAGCCGGCCCTTCTGCGCCCCAGGTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp CAGCGCCCGCCTCCTGGCAGAGGATGGCGTACCCACTaGGGACCTGGCAACGCAGCTCCTCTTGCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: QRPPPGRGWRTH*GPGNAAPLALL
Trigger: CAAGAGAGCAAGAGGAGCTGCGTTGCCAGGTCCTCAGTGGGTACGCCATCCTCTGCCAGGAGGCGGGCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546292.2
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp AGCACCCTACAGGCCTGGGTGCTGTTGCTCGCCAGCTaGTCCGGGCTACATTCGGACACTTGGAGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: STLQAWVLLLAS*SGLHSDTWRPV
Trigger: CACGGGCCTCCAAGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GCACAGATCCAGCACGCAGTGCTCTTGGAAGGGCTCTaGGGCCACCGTCTGGTGACAGGCAGCAAAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AQIQHAVLLEGL*GHRLVTGSKGA
Trigger: GGCCCCTTTGCTGCCTGTCACCAGACGGTGGCCCCAGAGCCCTTCCAAGAGCACTGCGTGCTGGATCTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TGGGGGTCTGCCAGCACCCTACAGGCCTGGGTGCTGTaGCTCGCCAGCTGCTCCGGGCTACATTCGGACACT +
Preference number: 6 (lower is better)
Translates to: WGSASTLQAWVL*LASCSGLHSDT
Trigger: AGTGTCCGAATGTAGCCCGGAGCAGCTGGCGAGCAACAGCACCCAGGCCTGTAGGGTGCTGGCAGACCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp CTGGGGAAGCGCAGGAGTGCGTCCTCGGTCTTCACCTCCCAGCTGTaGCCAAAGGTGTTGAGGTTCTGGGTCAGGGCGCCACTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LGKRRSASSVFTSQL*PKVLRFWVRAPLGS
Trigger: GCTGCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAAGACCGAGGACGCACTCCTGCGCTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp CGGCACAGGGCTGTGGTGTCGCCCTTGGTCCCACACTaGCCATGCACGCAACTGGCAAAGCTGGACTGGGGA +
Preference number: 6 (lower is better)
Translates to: RHRAVVSPLVPH*PCTQLAKLDWG
Trigger: TCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACACCACAGCCCTGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp CACAGAGGGTGTTTGCACAGTCCACCAGGAAGGGCGTaGGGTCTATGCGGGAGGCGCACTGGGCCCACACAG +
Preference number: 6 (lower is better)
Translates to: HRGCLHSPPGRA*GLCGRRTGPTQ
Trigger: CTGTGTGGGCCCAGTGCGCCTCCCGCATAGACCTCACGCCCTTCCTGGTGGACTGTGCAAACACCCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GGCATCGGAAGTCCCCGCACTGAATGGCTCCTCCCGTaGAGACACACTTCTCCGTGCAACCGCTGGAGACCC +
Preference number: 6 (lower is better)
Translates to: GIGSPRTEWLLP*RHTSPCNRWRP
Trigger: GGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTCAGTGCGGGGACTTCCGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp AGCTGCTGCCCAGCTGGTAGTAGATGCCATTGCTGGTaGAGCCACAGTCAGCCAGGGGAGGCTCTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SCCPAGSRCHCW*SHSQPGEALGA
Trigger: GGCACCCAGAGCCTCCCCTGGCTGACTGTGGCTGCACCAGCAATGGCATCTACTACCAGCTGGGCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542585.5
ENST00000613979.5
ENST00000618565.4
CDS CAA 90 bp TGGGAGCGAGGTATGCACTCGAGGCCACTGAGGACGAAGCCCGGATaGCATTCACAGGCCTCCACGCACCGGTCTGAGCAGAACATGCCG +
Preference number: 6 (lower is better)
Translates to: WERGMHSRPLRTKPG*HSQASTHRSEQNMP
Trigger: CGGCATGTTCTGCTCAGACCGGTGCGTGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCATACCTCGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp GCCTTCACGTGCAGCAGGCATGTCTCAAATGGGCCATaGGTGTCGACCAGCCGTCCACAGAACCCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: AFTCSRHVSNGP*VSTSRPQNPGP
Trigger: GGGGCCAGGGTTCTGTGGACGGCTGGTCGACACTCATGGCCCATTTGAGACATGCCTGCTGCACGTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp AAGGTGGCTCCCTGCTCCCGACACTGCCCGTCATTCTaGCAGGGGTTCTGCAGACACGGGCTTTCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: KVAPCSRHCPSF*QGFCRHGLSQR
Trigger: CCTCTGCGAAAGCCCGTGTCTGCAGAACCCCTGTCAGAATGACGGGCAGTGTCGGGAGCAGGGAGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546292.2
ENST00000620596.4
CDS GCA 72 bp GTGTCCCACACTGAGAGATCTGGCACTCGACCCGACTaGCGGGCCAGCAGCGGCAATGTTCTGTGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: VSHTERSGTRPD*RASSGNVLCSW
Trigger: CCAACTGCACAGAACATTGCCGCTGCTGGCCCGGCAGTCGGGTCGAGTGCCAGATCTCTCAGTGTGGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp AGGTGTCAGGGCATGGCTTCGCACACAGGGAGTACTTaGTGTTGGGCGGGCAGGCCATTGGGCAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: RCQGMASHTGST*CWAGRPLGRSG
Trigger: CCCACTTCTGCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGCGAAGCCATGCCCTGACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GCAAGAAGATGGAGCTCCTGGGCGGATCCATCTTGTTaGGTCCTTCCACGAGGAGGGGCTCCACCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: ARRWSSWADPSC*VLPRGGAPPPQ
Trigger: CTGAGGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp CTCCTCCGCTGGTATAGCCCTGGGGAAGCGCAGGAGTaGGTCCTCGGTCTTCACCTCCCAGCTGTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: LLRWYSPGEAQE*VLGLHLPAVAK
Trigger: TTTGGCAACAGCTGGGAGGTGAAGACCGAGGACGCACTCCTGCGCTTCCCCAGGGCTATACCAGCGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp TGCCAGCTCAGACCTGGTAGTAGATGCCATTGCTGGTaGAGCCACAGTCAGCCAGGGGAGGCTCTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: CQLRPGSRCHCW*SHSQPGEALGA
Trigger: GGCACCCAGAGCCTCCCCTGGCTGACTGTGGCTGCACCAGCAATGGCATCTACTACCAGGTCTGAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620868.4
CDS CCA 72 bp GGCACAGTGACGGTGGTGAGCATCCAGGAGGGTCTCTaGGTGTTCCAGTGTTTCCAGAGCACATCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: GTVTVVSIQEGL*VFQCFQSTSGR
Trigger: CCGCCCCGATGTGCTCTGGAAACACTGGAACACCCAGAGACCCTCCTGGATGCTCACCACCGTCACTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TCCAGGGCTTCACAGCGTGGCCTGCGTCCTGGCAGGTaGTGGTCATGGTGGACATGTGTGTGCACAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SRASQRGLRPGR*WSWWTCVCTAG
Trigger: ACCTGCTGTGCACACACATGTCCACCATGACCACCACCTGCCAGGACGCAGGCCACGCTGTGAAGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TGTCGCCCTTGGTCCCACACTGACCATGCACGCAACTaGCAAAGCTGGACTGGGGAGGCACCACCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: CRPWSHTDHARN*QSWTGEAPPGD
Trigger: GTCACCAGGTGGTGCCTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCAAGGGCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TCAGGGCATGGCTTCGCACACAGGGAGTACTTGCTGTaGGGCGGGCAGGCCATTGGGCAGAAGTGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: SGHGFAHREYLL*GGQAIGQKWGS
Trigger: GGAACCCCACTTCTGCCCAATGGCCTGCCCGCCCAACAGCAAGTACTCCCTGTGTGCGAAGCCATGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TCCTGCAAGAAGATGGAGCTCCTGGGCGGATCCATCTaGTTGCGTCCTTCCACGAGGAGGGGCTCCACCCCC +
Preference number: 6 (lower is better)
Translates to: SCKKMELLGGSI*LRPSTRRGSTP
Trigger: GGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp CGCAGGAGTGCGTCCTCGGTCTTCACCTCCCAGCTGTaGCCAAAGGTGTTGAGGTTCTGGGTCAGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: RRSASSVFTSQL*PKVLRFWVRAP
Trigger: TGGCGCCCTGACCCAGAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAAGACCGAGGACGCACTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp TGGTCCTCGTCCTGGTCCGTCTGCCAGCTGTTCCCCAGCTCCTCCTaGTCTCCTGCTGGGCTGCCGTCCAACTTCAGGTGGTCATTGTCA +
Preference number: 6 (lower is better)
Translates to: WSSSWSVCQLFPSSS*SPAGLPSNFRWSLS
Trigger: TGACAATGACCACCTGAAGTTGGACGGCAGCCCAGCAGGAGACAAGGAGGAGCTGGGGAACAGCTGGCAGACGGACCAGGACGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp ACCCACACTGGGAGCGAGGTATGCACTCGAGGCCACTaGGGACGAAGCCCGGATTGCATTCACAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: THTGSEVCTRGH*GRSPDCIHRPP
Trigger: TGGAGGCCTGTGAATGCAATCCGGGCTTCGTCCTCAGTGGCCTCGAGTGCATACCTCGCTCCCAGTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp AGAGGGCCCACTGGCTCGAACCCAGTCTTCATCGTCTaGGGACACTTGGGACCAGTCACAGAGGGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: RGPTGSNPVFIV*GHLGPVTEGFG
Trigger: GCCAAACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGGGTTCGAGCCAGTGGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp ACCGAACTCCGTCTGCAGCTCCACAAACCGCCCGCTTaGACCCAGGAAGACGCCTTTAGAGGGTATGGCTGG +
Preference number: 6 (lower is better)
Translates to: TELRLQLHKPPA*TQEDAFRGYGW
Trigger: CCAGCCATACCCTCTAAAGGCGTCTTCCTGGGTGCAAGCGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp TCACCATCCCATCTCACCCGCAAACCGAACTCCGTCTaGAGCTCCACAAACCGCCCGCTTGCACCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SPSHLTRKPNSV*SSTNRPLAPRK
Trigger: CTTCCTGGGTGCAAGCGGGCGGTTTGTGGAGCTGCAGACGGAGTTCGGTTTGCGGGTGAGATGGGATGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp CTTGTACCACCGCTCCCCTACCTTGAAGTAGCTGCCTaGAGGGTGGAGGCACCCACACTGGGAGCGAGGTAT +
Preference number: 6 (lower is better)
Translates to: LVPPLPYLEVAA*RVEAPTLGARY
Trigger: ATACCTCGCTCCCAGTGTGGGTGCCTCCACCCTGCAGGCAGCTACTTCAAGGTAGGGGAGCGGTGGTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp TCAGAGGATTCAGGTAACTTCCAGGCGGCCCCCAGCTaGATGGAATCGCCTGCAAGCTTTCTGTCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: SEDSGNFQAAPS*MESPASFLSGR
Trigger: GCGCCCCGACAGAAAGCTTGCAGGCGATTCCATGCAGCTGGGGGCCGCCTGGAAGTTACCTGAATCCTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp AGGTCGGCCGCCCTGCAGTTTCCACTCGGGTTCTCCTaGTGTTCCGCTGGAATCTGCTGCTCATCTACCAGG +
Preference number: 6 (lower is better)
Translates to: RSAALQFPLGFS*CSAGICCSSTR
Trigger: CCTGGTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGGAAACTGCAGGGCGGCCGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp ACTGAATGGCTCCTCCCGTGCAGACACACTTCTCCGTaGAACCGCTGGAGACCCAGCTCTTGCCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: TEWLLPCRHTSP*NRWRPSSCPEG
Trigger: TCCCTCTGGGCAAGAGCTGGGTCTCCAGCGGTTGCACGGAGAAGTGTGTCTGCACGGGAGGAGCCATTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TGTCCGAGGGCCCAGTGTCCACCATCCCCGGAAGTCTaGACCCAGTCACAGAAGGGATGGGCGTTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: CPRAQCPPSPEV*TQSQKGWALSS
Trigger: TGAAGACAACGCCCATCCCTTCTGTGACTGGGTCCAGACTTCCGGGGATGGTGGACACTGGGCCCTCGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GAAAGCTGCTGCCCAGCTGGTAGTAGATGCCATTGCTaGTGCAGCCACAGTCAGCCAGGGGAGGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: ESCCPAGSRCHC*CSHSQPGEALG
Trigger: ACCCAGAGCCTCCCCTGGCTGACTGTGGCTGCACCAGCAATGGCATCTACTACCAGCTGGGCAGCAGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542585.5
ENST00000613979.5
ENST00000618565.4
CDS CCA 72 bp TGCTGCCAGCTCAGACCTGGTAGTAGATGCCATTGCTaGTGCAGCCACAGTCAGCCAGGGGAGGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: CCQLRPGSRCHC*CSHSQPGEALG
Trigger: ACCCAGAGCCTCCCCTGGCTGACTGTGGCTGCACCAGCAATGGCATCTACTACCAGGTCTGAGCTGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620868.4
CDS CAA 72 bp GGCACCTTGGGCATGGCAGCCATAGATACCATCCTGTaGGCCACAGAACTCCTGGGCCCTACACCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GTLGMAAIDTIL*ATELLGPTPPG
Trigger: CCCTGGAGGTGTAGGGCCCAGGAGTTCTGTGGCCAACAGGATGGTATCTATGGCTGCCATGCCCAAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TGCAAGAAGATGGAGCTCCTGGGCGGATCCATCTTGTaGCGTCCTTCCACGAGGAGGGGCTCCACCCCCTCA +
Preference number: 6 (lower is better)
Translates to: CKKMELLGGSIL*RPSTRRGSTPS
Trigger: TGAGGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp ATCACTTCCTGCAAGAAGATGGAGCTCCTGGGCGGATCCATCTTGTaGCGTCCTTCCACGAGGAGGGGCTCCACCCCCTCAGGCAGTACG +
Preference number: 6 (lower is better)
Translates to: ITSCKKMELLGGSIL*RPSTRRGSTPSGST
Trigger: CGTACTGCCTGAGGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GGCCTGGTAGAGACCTCCGAACTCACAGAGGGTGTTTaGACAGTCCACCAGGAAGGGCGTGAGGTCTATGCG +
Preference number: 6 (lower is better)
Translates to: GLVETSELTEGV*TVHQEGREVYA
Trigger: CGCATAGACCTCACGCCCTTCCTGGTGGACTGTGCAAACACCCTCTGTGAGTTCGGAGGTCTCTACCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CCTGCATTAGGGAAACCTCCCGCAGGGCCCATGCCATaGACGGGTCCATTTTTATGTCCGAGGGCCCAGTGT +
Preference number: 6 (lower is better)
Translates to: PALGKPPAGPMP*TGPFLCPRAQC
Trigger: ACACTGGGCCCTCGGACATAAAAATGGACCCGTCCATGGCATGGGCCCTGCGGGAGGTTTCCCTAATGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CACCGGTCTGAGCAGAACATGCCGGAGAATCCTGAATaGCAGGTGTCAGGGCATGGCTTCGCACACAGGGAG +
Preference number: 6 (lower is better)
Translates to: HRSEQNMPENPE*QVSGHGFAHRE
Trigger: CTCCCTGTGTGCGAAGCCATGCCCTGACACCTGCCATTCAGGATTCTCCGGCATGTTCTGCTCAGACCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TGTTCCAGGCGTCTGCCATGCTGTTCTCCTGGCAGCTaGAGGGCTTGCCACCCACAAGGAAACAGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: CSRRLPCCSPGS*RACHPQGNSQV
Trigger: AACCTGGCTGTTTCCTTGTGGGTGGCAAGCCCTCCAGCTGCCAGGAGAACAGCATGGCAGACGCCTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GCACTGATCTTGAAGAAGGGCAAGGCCATGGCGGGGTaGCACACTTTCACCAGGACAAGAGTGCAGGCGTCC +
Preference number: 6 (lower is better)
Translates to: ALILKKGKAMAG*HTFTRTRVQAS
Trigger: GGACGCCTGCACTCTTGTCCTGGTGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCTTCAAGATCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp GGAGGGGACTGTCACTTCCACCAAGTGGCTCCCGTCGTAGCGAACTaGGAGCCCAAAGTTCGTGTAGAGGAGGACGAGGTTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: GGDCHFHQVAPVVAN*EPKVRVEEDEVAAE
Trigger: CTCAGCAGCAACCTCGTCCTCCTCTACACGAACTTTGGGCTCCAAGTTCGCTACGACGGGAGCCACTTGGTGGAAGTGACAGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp GAGGCCCGACAATGGAGCAGCCCATCCAGGGCCCAGCATATCTGGTaGGGTTTGCAGGTGCTCTGGAAGCAGGTGATGTTGTTGTGGACG +
Preference number: 6 (lower is better)
Translates to: EARQWSSPSRAQHIW*GLQVLWKQVMLLWT
Trigger: CGTCCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATATGCTGGGCCCTGGATGGGCTGCTCCATTGTCGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp GTAATCACTTCCTGCAAGAAGATGGAGCTCCTGGGCGGATCCATCTaGTTGCGTCCTTCCACGAGGAGGGGCTCCACCCCCTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: VITSCKKMELLGGSI*LRPSTRRGSTPSGS
Trigger: ACTGCCTGAGGGGGTGGAGCCCCTCCTCGTGGAAGGACGCAACAAGATGGATCCGCCCAGGAGCTCCATCTTCTTGCAGGAAGTGATTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp AGGAGTGCGTCCTCGGTCTTCACCTCCCAGCTGTTGCCAAAGGTGTaGAGGTTCTGGGTCAGGGCGCCACTGGGCAGCATCATGTCATTC +
Preference number: 6 (lower is better)
Translates to: RSASSVFTSQLLPKV*RFWVRAPLGSIMSF
Trigger: GAATGACATGATGCTGCCCAGTGGCGCCCTGACCCAGAACCTCAACACCTTTGGCAACAGCTGGGAGGTGAAGACCGAGGACGCACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp GCCCAAAGTTCGTGTAGAGGAGGACGAGGTTGCTGCTaGGCCTTATGGTCACCCGGCCTTGTGCAAGCCACA +
Preference number: 6 (lower is better)
Translates to: AQSSCRGGRGCC*ALWSPGLVQAT
Trigger: TGTGGCTTGCACAAGGCCGGGTGACCATAAGGCTCAGCAGCAACCTCGTCCTCCTCTACACGAACTTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp CGACCAGCCGTCCACAGAACCCTGGCCCCGACATGCTaGTCTGCAGAGATGAATCACAAGACGGGGAATTCA +
Preference number: 6 (lower is better)
Translates to: RPAVHRTLAPTC*SAEMNHKTGNS
Trigger: TGAATTCCCCGTCTTGTGATTCATCTCTGCAGAGCAGCATGTCGGGGCCAGGGTTCTGTGGACGGCTGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GGTGCTGCAGCCCCTGGAATCCGCACATATCAAGCATaGAGCTGTCGAAGAAGGAAGCGGCCTTCACGTGCA +
Preference number: 6 (lower is better)
Translates to: GAAAPGIRTYQA*SCRRRKRPSRA
Trigger: TGCACGTGAAGGCCGCTTCCTTCTTCGACAGCTGCATGCTTGATATGTGCGGATTCCAGGGGCTGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp ATTCACAGGCCTCCACGCACCGGTCTGAGCAGAACATaGCGGAGAATCCTGAATGGCAGGTGTCAGGGCATG +
Preference number: 6 (lower is better)
Translates to: IHRPPRTGLSRT*RRILNGRCQGM
Trigger: CATGCCCTGACACCTGCCATTCAGGATTCTCCGGCATGTTCTGCTCAGACCGGTGCGTGGAGGCCTGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GGGTCAGGGCGCCACTGGGCAGCATCATGTCATTCTTaGGGTTCTTGTCGTAGTTTCCGCACAGGCCACTCA +
Preference number: 6 (lower is better)
Translates to: GSGRHWAASCHS*GSCRSFRTGHS
Trigger: TGAGTGGCCTGTGCGGAAACTACGACAAGAACCGCAAGAATGACATGATGCTGCCCAGTGGCGCCCTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CTGGCTCGAACCCAGTCTTCATCGTCTGCGGACACTTaGGACCAGTCACAGAGGGGTTTGGCGTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: LARTQSSSSADT*DQSQRGLASSS
Trigger: TGAGGATGACGCCAAACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGGGTTCGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GCTTGCACCCAGGAAGACGCCTTTAGAGGGTATGGCTaGGAGAGTAACTTGCTGACCCCCAACCAGAGTGCG +
Preference number: 6 (lower is better)
Translates to: ACTQEDAFRGYG*ESNLLTPNQSA
Trigger: CGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCCATACCCTCTAAAGGCGTCTTCCTGGGTGCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TGGTCCCACACTGACCATGCACGCAACTGGCAAAGCTaGACTGGGGAGGCACCACCTGGTGACATTGAGAGA +
Preference number: 6 (lower is better)
Translates to: WSHTDHARNWQS*TGEAPPGDIER
Trigger: TCTCTCAATGTCACCAGGTGGTGCCTCCCCAGTCCAGCTTTGCCAGTTGCGTGCATGGTCAGTGTGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp ACTGGCTCGAACCCAGTCTTCATCGTCTGCGGACACTaGGGACCAGTCACAGAGGGGTTTGGCGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: TGSNPVFIVCGH*GPVTEGFGVIL
Trigger: GAGGATGACGCCAAACCCCTCTGTGACTGGTCCCAAGTGTCCGCAGACGATGAAGACTGGGTTCGAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp ACTTTGCTCAGGCAGGACACGCCTTCCTGTCCCTGCTCCTCATTCTaGGCTGTCACCCTGAAGAATGGGTCTGTTGAGTTGCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: TLLRQDTPSCPCSSF*AVTLKNGSVELPQG
Trigger: GCCCTGTGGCAACTCAACAGACCCATTCTTCAGGGTGACAGCCAAGAATGAGGAGCAGGGACAGGAAGGCGTGTCCTGCCTGAGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp CCACGGCAAACTGTATCCGTCCCACGGCTGTGTAATTaGCAGAAACAGCCTGCCAGTTGGGCCCAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: PRQTVSVPRLCN*QKQPASWAQVV
Trigger: GACAACCTGGGCCCAACTGGCAGGCTGTTTCTGTCAATTACACAGCCGTGGGACGGATACAGTTTGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp GCCCTTGAAAATAAGCTGCATGGGCTGTTGGTGTCCTaGGGGGACGGTGACGGAGGTGTTCTGCCAGTAAGG +
Preference number: 6 (lower is better)
Translates to: ALENKLHGLLVS*GDGDGGVLPVR
Trigger: CCTTACTGGCAGAACACCTCCGTCACCGTCCCCTCAGGACACCAACAGCCCATGCAGCTTATTTTCAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp GTGGTGGTCATGGTGGACATGTGTGTGCACAGCAGGTaGTGCAGCCCCTGGAATCCGCACATATCAAGCATG +
Preference number: 6 (lower is better)
Translates to: VVVMVDMCVHSR*CSPWNPHISSM
Trigger: CATGCTTGATATGTGCGGATTCCAGGGGCTGCAGCACCTGCTGTGCACACACATGTCCACCATGACCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp AGTTCGAGCATAGTACCCTCCCCAAGGCCATACATGTaGTATGCGAACTCCACGCAGATGTCACCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: SSSIVPSPRPYM*YANSTQMSPGA
Trigger: CGCCCCAGGTGACATCTGCGTGGAGTTCGCATACCACATGTATGGCCTTGGGGAGGGTACTATGCTCGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CGAAGCAGGACAAGCACAGGATTCGTAGCGGGCATTTaGAGGGCAGCGCTCTGTACTGGATCTGGAGGTTGT +
Preference number: 6 (lower is better)
Translates to: RSRTSTGFVAGI*RAALCTGSGGC
Trigger: ACAACCTCCAGATCCAGTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAATCCTGTGCTTGTCCTGCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TCTGACATTCACAGCTCTCAGCACAGGGCAGTGCTTTaGGGCAGTCCCTCGGGTTGTTTATGCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SDIHSSQHRAVL*GSPSGCLCCCR
Trigger: CCTGCAGCAGCATAAACAACCCGAGGGACTGCCCCAAAGCACTGCCCTGTGCTGAGAGCTGTGAATGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp AGGATGCTGGGCAGGGTGTCATACAGCTCTGATATATaGTACCTGCTGGACACTCCATGGCGCAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: RMLGRVSYSSDI*YLLDTPWRRGC
Trigger: GCACCCTCTGCGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000620868.4
CDS CAA 72 bp ACGAAGCAGGACAAGCACAGGATTCGTAGCGGGCATTaGGAGGGCAGCGCTCTGTACTGGATCTGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: TKQDKHRIRSGH*EGSALYWIWRL
Trigger: CAACCTCCAGATCCAGTACAGAGCGCTGCCCTCCAAATGCCCGCTACGAATCCTGTGCTTGTCCTGCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp CAATGGAGCAGCCCATCCAGGGCCCAGCATATCTGGTaGGGTTTGCAGGTGCTCTGGAAGCAGGTGATGTTG +
Preference number: 6 (lower is better)
Translates to: QWSSPSRAQHIW*GLQVLWKQVML
Trigger: CAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATATGCTGGGCCCTGGATGGGCTGCTCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GTTCCACCTTCCTCCTTCTCATGCTTGGCACTGATCTaGAAGAAGGGCAAGGCCATGGCGGGGTGGCACACT +
Preference number: 6 (lower is better)
Translates to: VPPSSFSCLALI*KKGKAMAGWHT
Trigger: AGTGTGCCACCCCGCCATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCATGAGAAGGAGGAAGGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp CATATCTGGTTGGGTTTGCAGGTGCTCTGGAAGCAGGTGATGTTGTaGTGGACGGAGCAGGTGCAGAGCCTGGTGCAGGTGTTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: HIWLGLQVLWKQVML*WTEQVQSLVQVFSV
Trigger: CACAGAGAACACCTGCACCAGGCTCTGCACCTGCTCCGTCCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp AAAGCCTCAGTTCCACCTTCCTCCTTCTCATGCTTGGCACTGATCTaGAAGAAGGGCAAGGCCATGGCGGGGTGGCACACTTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: KASVPPSSFSCLALI*KKGKAMAGWHTFTR
Trigger: CCTGGTGAAAGTGTGCCACCCCGCCATGGCCTTGCCCTTCTTCAAGATCAGTGCCAAGCATGAGAAGGAGGAAGGTGGAACTGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp GACAGAAACAGCCTGCCAGTTGGGCCCAGGTTGTCCTaGGAAGAGAGTGTGTTTCCGGATACTCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: DRNSLPVGPRLS*EESVFPDTPQD
Trigger: GTCTTGGGGAGTATCCGGAAACACACTCTCTTCTCAGGACAACCTGGGCCCAACTGGCAGGCTGTTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp ATATCTGGTTGGGTTTGCAGGTGCTCTGGAAGCAGGTaGTGTTGTTGTGGACGGAGCAGGTGCAGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: ISGWVCRCSGSR*CCCGRSRCRAW
Trigger: CCAGGCTCTGCACCTGCTCCGTCCACAACAACATCACCTGCTTCCAGAGCACCTGCAAACCCAACCAGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp TTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTaGTATATGGTACCTGCTGGACACTCCATGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LAQDAGQGVIQL*YMVPAGHSMAQ
Trigger: CTGCGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542585.5
ENST00000620868.4
CDS CCA 72 bp ACAAGGAGCAATGCTGGTTGCATCAACTGCCACAGCTaGCTCTGGGGTCTTTCCAAAAACGCCTACCACGGC +
Preference number: 6 (lower is better)
Translates to: TRSNAGCINCHS*LWGLSKNAYHG
Trigger: GCCGTGGTAGGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGATGCAACCAGCATTGCTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CAGAATCACACTGGTCATAGGGGTACTTGGAGCATGTaGAGACATCACCAAGGCTGCCAGCCCAGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: QNHTGHRGTWSM*RHHQGCQPSGC
Trigger: ACAGCCACTGGGCTGGCAGCCTTGGTGATGTCTCCACATGCTCCAAGTACCCCTATGACCAGTGTGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CCTGCAGTTTCCACTCGGGTTCTCCTGCTGTTCCGCTaGAATCTGCTGCTCATCTACCAGGAGACTCTGACA +
Preference number: 6 (lower is better)
Translates to: PAVSTRVLLLFR*NLLLIYQETLT
Trigger: TGTCAGAGTCTCCTGGTAGATGAGCAGCAGATTCCAGCGGAACAGCAGGAGAACCCGAGTGGAAACTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp AGGATGCTGGGCAGGGTGTCATACAGCTCTGATATATaGTACCTGCTGGACACTCCATGGCCACTGAGGACC +
Preference number: 6 (lower is better)
Translates to: RMLGRVSYSSDI*YLLDTPWPLRT
Trigger: GGTCCTCAGTGGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613979.5
ENST00000618565.4
CDS CAA 72 bp AGGCAGGACACGCCTTCCTGTCCCTGCTCCTCATTCTaGGCTGTCACCCTGAAGAATGGGTCTGTTGAGTTG +
Preference number: 6 (lower is better)
Translates to: RQDTPSCPCSSF*AVTLKNGSVEL
Trigger: CAACTCAACAGACCCATTCTTCAGGGTGACAGCCAAGAATGAGGAGCAGGGACAGGAAGGCGTGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GAAGACGCCTTTAGAGGGTATGGCTGGGAGAGTAACTaGCTGACCCCCAACCAGAGTGCGTCTGCCCTTAAG +
Preference number: 6 (lower is better)
Translates to: EDAFRGYGWESN*LTPNQSASALK
Trigger: CTTAAGGGCAGACGCACTCTGGTTGGGGGTCAGCAAGTTACTCTCCCAGCCATACCCTCTAAAGGCGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TGTCACTTCCACCAAGTGGCTCCCGTCGTAGCGAACTaGGAGCCCAAAGTTCGTGTAGAGGAGGACGAGGTT +
Preference number: 6 (lower is better)
Translates to: CHFHQVAPVVAN*EPKVRVEEDEV
Trigger: AACCTCGTCCTCCTCTACACGAACTTTGGGCTCCAAGTTCGCTACGACGGGAGCCACTTGGTGGAAGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp AGGCAGTACGTCCACAGTCTTGATCAGAACATAGGTCATGCGGCCTaGCAAGCGGTAGCTGAAGCCGTCAAATGTGAGGTAACGGGGGTC +
Preference number: 6 (lower is better)
Translates to: RQYVHSLDQNIGHAA*QAVAEAVKCEVTGV
Trigger: GACCCCCGTTACCTCACATTTGACGGCTTCAGCTACCGCTTGCAAGGCCGCATGACCTATGTTCTGATCAAGACTGTGGACGTACTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp ATGGCCATTCAGCATGACCTTACAGCCTCTGAGCAGTaGGATGCTGAGGTCAAAGACTGTCACGTGGACGGC +
Preference number: 6 (lower is better)
Translates to: MAIQHDLTASEQ*DAEVKDCHVDG
Trigger: GCCGTCCACGTGACAGTCTTTGACCTCAGCATCTCACTGCTCAGAGGCTGTAAGGTCATGCTGAATGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp TTGGCACAGGATGCTGGGCAGGGTGTCATACAGCTCTaGTATATGGTACCTGCTGGACACTCCATGGCCACT +
Preference number: 6 (lower is better)
Translates to: LAQDAGQGVIQL*YMVPAGHSMAT
Trigger: AGTGGCCATGGAGTGTCCAGCAGGTACCATATATCAGAGCTGTATGACACCCTGCCCAGCATCCTGTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613979.5
ENST00000618565.4
CDS GCA 72 bp AGTTTCCGCACAGGCCACTCACAAGCCCCTCGTACATaGTGGGTAGGGAGATCACTGCATTTTTCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: SFRTGHSQAPRT*WVGRSLHFSFH
Trigger: GTGGAAGGAAAAATGCAGTGATCTCCCTACCCAGCATGTACGAGGGGCTTGTGAGTGGCCTGTGCGGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp AGCAATGCTGGTTGCATCAACTGCCACAGCTGGCTCTaGGGTCTTTCCAAAAACGCCTACCACGGCAAACTG +
Preference number: 6 (lower is better)
Translates to: SNAGCINCHSWL*GLSKNAYHGKL
Trigger: CAGTTTGCCGTGGTAGGCGTTTTTGGAAAGACCCCAGAGCCAGCTGTGGCAGTTGATGCAACCAGCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp CCAGAGTATGTGCTGGACACAGTAACATACAGCTGCTaGTCACCATCCCATCTCACCCGCAAACCGAACTCC +
Preference number: 6 (lower is better)
Translates to: PEYVLDTVTYSC*SPSHLTRKPNS
Trigger: GGAGTTCGGTTTGCGGGTGAGATGGGATGGTGACCAGCAGCTGTATGTTACTGTGTCCAGCACATACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp TTCCGCACAGGCCACTCACAAGCCCCTCGTACATGCTaGGTAGGGAGATCACTGCATTTTTCCTTCCACCAA +
Preference number: 6 (lower is better)
Translates to: FRTGHSQAPRTC*VGRSLHFSFHQ
Trigger: TTGGTGGAAGGAAAAATGCAGTGATCTCCCTACCCAGCATGTACGAGGGGCTTGTGAGTGGCCTGTGCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp TGTTCAGACTTGTCTGAGACACAATTGCTGTTGCTGTaGTCGGAAGTGAGCTGGCAGTGGGACCCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: CSDLSETQLLLL*SEVSWQWDPEG
Trigger: CCCCTCTGGGTCCCACTGCCAGCTCACTTCCGACAACAGCAACAGCAATTGTGTCTCAGACAAGTCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp TTCCTGATGACCCTTTCTTCTGAGTCCACTTGGCCCCGGAGGCAGTaGGGATCCAGGTCCAGTCACAGAGGTCATTTGGAATGTCAAAGC +
Preference number: 6 (lower is better)
Translates to: FLMTLSSESTWPRRQ*GSRSSHRGHLECQS
Trigger: GCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCCAAGTGGACTCAGAAGAAAGGGTCATCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp ACTGAGCATTGTTCAGACTTGTCTGAGACACAATTGCTGTTGCTGTaGTCGGAAGTGAGCTGGCAGTGGGACCCAGAGGGGCATCGGAAG +
Preference number: 6 (lower is better)
Translates to: TEHCSDLSETQLLLL*SEVSWQWDPEGHRK
Trigger: CTTCCGATGCCCCTCTGGGTCCCACTGCCAGCTCACTTCCGACAACAGCAACAGCAATTGTGTCTCAGACAAGTCTGAACAATGCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp TTGCCAGAGTATGTGCTGGACACAGTAACATACAGCTaGTGGTCACCATCCCATCTCACCCGCAAACCGAAC +
Preference number: 6 (lower is better)
Translates to: LPEYVLDTVTYS*WSPSHLTRKPN
Trigger: GTTCGGTTTGCGGGTGAGATGGGATGGTGACCAGCAGCTGTATGTTACTGTGTCCAGCACATACTCTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp CGAATTCTGTTGTTGCTTTCACAGACGCACAACTCTTaGCAGCCTGGCTTGTACCACCGCTCCCCTACCTTG +
Preference number: 6 (lower is better)
Translates to: RILLLLSQTHNS*QPGLYHRSPTL
Trigger: CAAGGTAGGGGAGCGGTGGTACAAGCCAGGCTGCAAAGAGTTGTGCGTCTGTGAAAGCAACAACAGAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp TGGCCCCGGAGGCAGTTGGGATCCAGGTCCAGTCACAGAGGTCATTaGGAATGTCAAAGCTGCATGTTTGCATCATACAGACGCGATTAC +
Preference number: 6 (lower is better)
Translates to: WPRRQLGSRSSHRGH*ECQSCMFASYRRDY
Trigger: GTAATCGCGTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAACTGCCTCCGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 90 bp CCAGGATTGATCAAGATGAAACCCATAGCAACCACAGAGGCCGTGTaGCTTCCCTGGATGCCCTTGAAAATAAGCTGCATGGGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: PGLIKMKPIATTEAV*LPWMPLKISCMGCW
Trigger: CCAACAGCCCATGCAGCTTATTTTCAAGGGCATCCAGGGAAGCAACACGGCCTCTGTGGTTGCTATGGGTTTCATCTTGATCAATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp TCACAGAAGGGATGGGCGTTGTCTTCAAAGTCACACTaGGGAAAACCCTCCCCACAAGGAGCAATGCTGGTT +
Preference number: 6 (lower is better)
Translates to: SQKGWALSSKSH*GKPSPQGAMLV
Trigger: AACCAGCATTGCTCCTTGTGGGGAGGGTTTTCCTCAGTGTGACTTTGAAGACAACGCCCATCCCTTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS GCA 72 bp TCACAGAGGTCATTTGGAATGTCAAAGCTGCATGTTTaGATCATACAGACGCGATTACAGGAGCCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: SQRSFGMSKLHV*IIQTRLQEPRR
Trigger: CCGCCGGGGCTCCTGTAATCGCGTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GTCACAGAGGTCATTTGGAATGTCAAAGCTGCATGTTaGCATCATACAGACGCGATTACAGGAGCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: VTEVIWNVKAAC*HHTDAITGAPA
Trigger: CGCCGGGGCTCCTGTAATCGCGTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GAGCATTGTTCAGACTTGTCTGAGACACAATTGCTGTaGCTGTTGTCGGAAGTGAGCTGGCAGTGGGACCCA +
Preference number: 6 (lower is better)
Translates to: EHCSDLSETQLL*LLSEVSWQWDP
Trigger: TGGGTCCCACTGCCAGCTCACTTCCGACAACAGCAACAGCAATTGTGTCTCAGACAAGTCTGAACAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp GTCCACAGTCTTGATCAGAACATAGGTCATGCGGCCTaGCAAGCGGTAGCTGAAGCCGTCAAATGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: VHSLDQNIGHAA*QAVAEAVKCEV
Trigger: TACCTCACATTTGACGGCTTCAGCTACCGCTTGCAAGGCCGCATGACCTATGTTCTGATCAAGACTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS TCA 72 bp CGCTGGGCATCATTAGTTCGTCCTCTTCCTCATCATTaGAGTTCCCACACATGCCGCAGACCTTTCCATAGT +
Preference number: 6 (lower is better)
Translates to: RWASLVRPLPHH*SSHTCRRPFHS
Trigger: ACTATGGAAAGGTCTGCGGCATGTGTGGGAACTTCAATGATGAGGAAGAGGACGAACTAATGATGCCCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp CATCTTCTGGTTGTTGACCACAAGCTCCAGACCAGCTaGGAGCTGCACTTTATAGCCGTAGACGGTGGTAAT +
Preference number: 6 (lower is better)
Translates to: HLLVVDHKLQTS*ELHFIAVDGGN
Trigger: ATTACCACCGTCTACGGCTATAAAGTGCAGCTCCAAGCTGGTCTGGAGCTTGTGGTCAACAACCAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CCA 72 bp GGCAGTTGGGATCCAGGTCCAGTCACAGAGGTCATTTaGAATGTCAAAGCTGCATGTTTGCATCATACAGAC +
Preference number: 6 (lower is better)
Translates to: GSWDPGPVTEVI*NVKAACLHHTD
Trigger: GTCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp ATCAAGATGAAACCCATAGCAACCACAGAGGCCGTGTaGCTTCCCTGGATGCCCTTGAAAATAAGCTGCATG +
Preference number: 6 (lower is better)
Translates to: IKMKPIATTEAV*LPWMPLKISCM
Trigger: CATGCAGCTTATTTTCAAGGGCATCCAGGGAAGCAACACGGCCTCTGTGGTTGCTATGGGTTTCATCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp AGGCAGTTGGGATCCAGGTCCAGTCACAGAGGTCATTaGGAATGTCAAAGCTGCATGTTTGCATCATACAGA +
Preference number: 6 (lower is better)
Translates to: RQLGSRSSHRGH*ECQSCMFASYR
Trigger: TCTGTATGATGCAAACATGCAGCTTTGACATTCCAAATGACCTCTGTGACTGGACCTGGATCCCAACTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4
CDS CAA 72 bp AGTTCCCACACATGCCGCAGACCTTTCCATAGTAGGTaGTGGGGATTTCAATCTCTAAGAGATGATTCCCGT +
Preference number: 6 (lower is better)
Translates to: SSHTCRRPFHSR*WGFQSLRDDSR
Trigger: ACGGGAATCATCTCTTAGAGATTGAAATCCCCACAACCTACTATGGAAAGGTCTGCGGCATGTGTGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000538115.5
ENST00000542585.5
ENST00000546213.5
ENST00000546292.2
ENST00000613979.5
ENST00000618565.4
ENST00000620596.4
ENST00000620868.4