RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZADH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000180011

Ensembl transcript IDs: ENST00000322342.4, ENST00000537114.2, ENST00000581620.1, ENST00000582437.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGGGCAGATGGTAAAGGGGACTGCAGAGAAGTCACCTGGCGGATaGGAGGGCATTGGCCAGTGTTCCAGCTTCACTTCTGAGTCCAAC +
Preference number: 1 (lower is better)
Translates to: PGQMVKGTAEKSPGG*EGIGQCSSFTSESN
Trigger: GTTGGACTCAGAAGTGAAGCTGGAACACTGGCCAATGCCCTCCCATCCGCCAGGTGACTTCTCTGCAGTCCCCTTTACCATCTGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR GCA 90 bp GACATACCGTACCTCGAGCAGTGTAGCATGCTGTTACTAAGGCCTTaGCGTGTGCCTAGACAGCGCTTCCCTCCTGGGGCCCGTGTTTTG +
Preference number: 1 (lower is better)
Translates to: DIPYLEQCSMLLLRP*RVPRQRFPPGARVL
Trigger: CAAAACACGGGCCCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTCGAGGTACGGTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR GCA 90 bp ACAAGAGCCAGAGATGGGTGCAGGCTCCTCCCAGCTGTAAGTTTCTaGTGGCAACCATGGACCTCCAGGGTTTCGGCATCTAGGGCAACC +
Preference number: 1 (lower is better)
Translates to: TRARDGCRLLPAVSF*WQPWTSRVSASRAT
Trigger: GGTTGCCCTAGATGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTGCACCCATCTCTGGCTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 90 bp AGAGCCAGAGATGGGTGCAGGCTCCTCCCAGCTGTAAGTTTCTGCTaGCAACCATGGACCTCCAGGGTTTCGGCATCTAGGGCAACCTCT +
Preference number: 1 (lower is better)
Translates to: RARDGCRLLPAVSFC*QPWTSRVSASRATS
Trigger: AGAGGTTGCCCTAGATGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTGCACCCATCTCTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 90 bp GATGGGTGCAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATaGACCTCCAGGGTTTCGGCATCTAGGGCAACCTCTCTTCTAAGG +
Preference number: 1 (lower is better)
Translates to: DGCRLLPAVSFCWQP*TSRVSASRATSLLR
Trigger: CCTTAGAAGAGAGGTTGCCCTAGATGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTGCACCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR TCA 90 bp TTCAGGGCACTAAAGGTTAAGAGGGAAGCCGATGAGCCACAGGCGTaGCTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: FRALKVKREADEPQA*LRREGAGFAAFPVW
Trigger: CCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCATCGGCTTCCCTCTTAACCTTTAGTGCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 90 bp TCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCAGTaGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCA +
Preference number: 1 (lower is better)
Translates to: SEERVQVSLLFLCGQ*VNVGHQAIVPRSIS
Trigger: TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 90 bp GTCTCTTTCCGTGTGGCTGTGGCTGTTAGGTCTGAAAGGGATGGATaGATAACTAAGCACCACACTGGACGGGTTTTTCCTAGTCCCCTG +
Preference number: 1 (lower is better)
Translates to: VSFRVAVAVRSERDG*ITKHHTGRVFPSPL
Trigger: CAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCTTAGTTATTCATCCATCCCTTTCAGACCTAACAGCCACAGCCACACGGAAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 90 bp AGCATTTGGCTCTTTAGAAGTCATAACCAAATGGTAACAGATCACTaGGACTCCTTGGTTTCTCAAAGAGGCAAGCTCCTTCCACCCTGC +
Preference number: 1 (lower is better)
Translates to: SIWLFRSHNQMVTDH*DSLVSQRGKLLPPC
Trigger: GCAGGGTGGAAGGAGCTTGCCTCTTTGAGAAACCAAGGAGTCCCAGTGATCTGTTACCATTTGGTTATGACTTCTAAAGAGCCAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 90 bp AAACAAAAACACAAATTGAGTCTTCTCATTCACAAGAGCCAGAGATaGGTGCAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATG +
Preference number: 1 (lower is better)
Translates to: KQKHKLSLLIHKSQR*VQAPPSCKFLLATM
Trigger: CATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTGCACCCATCTCTGGCTCTTGTGAATGAGAAGACTCAATTTGTGTTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 90 bp TTTCAAAGACATCATCAGATAGATAGTGCTCCTCAAGGGAAATTTTaGCTTGGGGTGGAGGCACATGTTCAAATTTCTGCACTTAGGCCA +
Preference number: 1 (lower is better)
Translates to: FQRHHQIDSAPQGKF*LGVEAHVQISALRP
Trigger: TGGCCTAAGTGCAGAAATTTGAACATGTGCCTCCACCCCAAGCCAAAATTTCCCTTGAGGAGCACTATCTATCTGATGATGTCTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR TCA 90 bp GTCTTAAATGATATCATTTGTCAAGCTTCCAGCATCTTGTGGTGGTaGACACAAAAAGAAGGTCTGCGTTGTACTGAGGACATTACATCC +
Preference number: 1 (lower is better)
Translates to: VLNDIICQASSILWW*TQKEGLRCTEDITS
Trigger: GGATGTAATGTCCTCAGTACAACGCAGACCTTCTTTTTGTGTTCACCACCACAAGATGCTGGAAGCTTGACAAATGATATCATTTAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR GCA 90 bp TTAATTTGCTGCTTCAGAGGAAAGAGAACATTTCCATTTCACATGTaGCTTATCAGGTTGATGGTAGATAAAAGCCATTACGTGCTACTT +
Preference number: 1 (lower is better)
Translates to: LICCFRGKRTFPFHM*LIRLMVDKSHYVLL
Trigger: AAGTAGCACGTAATGGCTTTTATCTACCATCAACCTGATAAGGCACATGTGAAATGGAAATGTTCTCTTTCCTCTGAAGCAGCAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 90 bp AATTGTGCTGGATTAGAGTTGAACACACTTTCATGGTCAGAACCGTaGTACTTCTACTGGGTTTATCTCCACAAAAAGATTCATAACAAA +
Preference number: 1 (lower is better)
Translates to: NCAGLELNTLSWSEP*YFYWVYLHKKIHNK
Trigger: TTTGTTATGAATCTTTTTGTGGAGATAAACCCAGTAGAAGTATCACGGTTCTGACCATGAAAGTGTGTTCAACTCTAATCCAGCACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR TCA 90 bp CAGTTAAAATGTTGGTCTTTCATCTTTATTACCCTCCCATTAAAATaGAACAAACCGGGACTCACTTCAGTTTCGAAGAAGCAATTTAGT +
Preference number: 1 (lower is better)
Translates to: QLKCWSFIFITLPLK*NKPGLTSVSKKQFS
Trigger: ACTAAATTGCTTCTTCGAAACTGAAGTGAGTCCCGGTTTGTTTCATTTTAATGGGAGGGTAATAAAGATGAAAGACCAACATTTTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCGTTTCAGCGCAACGGTaGCAGCGGCAGCAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: APPSCKFLLATMDLQGFGVSAQR*QRQQSS
Trigger: TGAAGACTGCTGCCGCTGTCACCGTTGCGCTGAAAC...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCCCCCAACATGCTTCCTaGGGACAGTCAAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: APPSCKFLLATMDLQGFGPQHAS*GQSSLL
Trigger: CAGGAGGCTTGACTGTCCTCAGGAAGCATGTTGGGG...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp GCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTGGTGAACCCCCACTaGGAATGGAGCGCACACTTT +
Preference number: 2 (lower is better)
Translates to: ATGVTQKRGCRFRCFSCVVVNPH*EWSAHF
Trigger: AAAGTGTGCGCTCCATTCTCAGTGGGGGTTCACCAC...CACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR TCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGCCCGTGTTTTGTGGTaGACCCCCACTGAGAATGGA +
Preference number: 2 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFARVLW*TPTENG
Trigger: TCCATTCTCAGTGGGGGTTCACCACAAAACACGGGC...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR CCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTACGGTGCACAGGGCGATaGGACATACCGTACCTCGAG +
Preference number: 2 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLRCTGR*DIPYLE
Trigger: CTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCG...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCCCTCAAGGGAAATTTTaGCTTGGGGTGGAGGCACAT +
Preference number: 2 (lower is better)
Translates to: APPSCKFLLATMDLQGFGPQGKF*LGVEAH
Trigger: ATGTGCCTCCACCCCAAGCCAAAATTTCCCTTGAGG...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACGTTTCAGCGCAACGGTaGCAGCGGCAGCAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYVSAQR*QRQQSS
Trigger: TGAAGACTGCTGCCGCTGTCACCGTTGCGCTGAAAC...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTACTGAGGTCTCTACGGTaGACAGGGCGATGGGACATA +
Preference number: 2 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLLRSLR*TGRWDI
Trigger: TATGTCCCATCGCCCTGTGCACCGTAGAGACCTCAG...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 90 bp GCCAGTGTTCCAGCTTCACTTCTGAGTCCAACGGGCTCTGTAACCTaGGACCGGGCACCTTTTCTCTCTGGGTCCCAGTTTCTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: ASVPASLLSPTGSVT*DRAPFLSGSQFLFF
Trigger: GAAGAAAAGAAACTGGGACCCAGAGAGAAAAGGTGCCCGGTCCAAGGTTACAGAGCCCGTTGGACTCAGAAGTGAAGCTGGAACACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCCCTGCAAAACAGGCTTaGAGGAATAGCATTTGGCTC +
Preference number: 2 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFPAKQA*RNSIWL
Trigger: GAGCCAAATGCTATTCCTTCAAGCCTGTTTTGCAGG...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR CCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTAGCTGCTTTTCCTGTGTaGTCAGTGGGTCAATGTGGG +
Preference number: 2 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLAAFPV*SVGQCG
Trigger: CCCACATTGACCCACTGACCACACAGGAAAAGCAGC...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGCAGTAGGATTTCCTTaGTCCTCAGATGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFAVGFP*SSDGRK
Trigger: TTTCCTTCCATCTGAGGAGCAAGGAAATCCTACTGC...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCTACACTTGTCACTCATaGACTGCTTATGAGCATAAG +
Preference number: 2 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACYTCHS*TAYEHK
Trigger: CTTATGCTCATAAGCAGTTCATGAGTGACAAGTGTA...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR TCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGTACACTTGTCACTCATaGACTGCTTATGAGCATAAG +
Preference number: 2 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGYTCHS*TAYEHK
Trigger: CTTATGCTCATAAGCAGTTCATGAGTGACAAGTGTA...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR TCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCAGCCATAACATTCAGTaGAGCCATTATTTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: APPSCKFLLATMDLQGFGSHNIQ*SHYLVP
Trigger: TGGAACCAAATAATGGCTTCACTGAATGTTATGGCT...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR CCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGACAGCGCTTCCCTCCTaGGGCCCGTGTTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWTALPS*GPCFVV
Trigger: CACCACAAAACACGGGCCCCAGGAGGGAAGCGCTGT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGCGGTGCACAGGGCGATaGGACATACCGTACCTCGAG +
Preference number: 2 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWRCTGR*DIPYLE
Trigger: CTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCG...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 90 bp CTCTTTAGAAGTCATAACCAAATGGTAACAGATCACTGGGACTCCTaGGTTTCTCAAAGAGGCAAGCTCCTTCCACCCTGCCCGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LFRSHNQMVTDHWDS*VSQRGKLLPPCPAG
Trigger: ACCAGCCGGGCAGGGTGGAAGGAGCTTGCCTCTTTGAGAAACCAAGGAGTCCCAGTGATCTGTTACCATTTGGTTATGACTTCTAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR TCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCAGTGGTGAACCCCCACTaGGAATGGAGCGCACACTTT +
Preference number: 2 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAVVNPH*EWSAHF
Trigger: AAAGTGTGCGCTCCATTCTCAGTGGGGGTTCACCAC...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR TCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACTATTCTTCCTTGAGATaGCTGAGGTCTCTACGGTGC +
Preference number: 2 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYYSSLR*LRSLRC
Trigger: GCACCGTAGAGACCTCAGTCATCTCAAGGAAGAATA...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR TCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCAATGGGAATGCAGAATaGGTGGCTGCTATTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVNGNAE*VAAILF
Trigger: AAACAGAATAGCAGCCACTCATTCTGCATTCCCATT...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCACTGAGGTCTCTACGGTaGACAGGGCGATGGGACATA +
Preference number: 2 (lower is better)
Translates to: WECRMSGCYSVSRIRGNALRSLR*TGRWDI
Trigger: TATGTCCCATCGCCCTGTGCACCGTAGAGACCTCAG...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGCAGAATGAGTGGCTaGTATTCTGTTTCCAGAATC +
Preference number: 2 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLCRMSG*YSVSRI
Trigger: GATTCTGGAAACAGAATAGCAGCCACTCATTCTGCA...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTGGAACAATAACATCTaGAACGAGACCATCCATGAC +
Preference number: 2 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVWNNNI*NETIHD
Trigger: GTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCATGAATTTAGTTCCCTaGAACAATAACATCTGGAAC +
Preference number: 2 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVMNLVP*NNNIWN
Trigger: GTTCCAGATGTTATTGTTCCAGGGAACTAAATTCAT...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCTGAAAATATATGGCTaGCTTTTGCTACACTTGTCA +
Preference number: 2 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGLKIYG*LLLHLS
Trigger: TGACAAGTGTAGCAAAAGCCAGCCATATATTTTCAG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTATGGAACAATAACATCTaGAACGAGACCATCCATGAC +
Preference number: 2 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLWNNNI*NETIHD
Trigger: GTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCA...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCTTTCCATTTCACATGTaGCTTATCAGGTTGATGGTA +
Preference number: 2 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFFPFHM*LIRLMV
Trigger: TACCATCAACCTGATAAGGCACATGTGAAATGGAAA...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 90 bp AAGAATAGACTCGAGGACAATGTGGACCACAGAGCCCCTTTAGTCTaGCTGCTGTGTCACACTAGCTACTCAGCCAGGGAAACAATTAAA +
Preference number: 2 (lower is better)
Translates to: KNRLEDNVDHRAPLV*LLCHTSYSARETIK
Trigger: TTTAATTGTTTCCCTGGCTGAGTAGCTAGTGTGACACAGCAGCAAGACTAAAGGGGCTCTGTGGTCCACATTGTCCTCGAGTCTATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR CCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTATCAGAACGGGCCCATaGGGTTTCAGCGCAACGGTG +
Preference number: 2 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSIRTGP*GFSATV
Trigger: CACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGAT...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCATTTCCATTTCACATGTaGCTTATCAGGTTGATGGTA +
Preference number: 2 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISFPFHM*LIRLMV
Trigger: TACCATCAACCTGATAAGGCACATGTGAAATGGAAA...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR GCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGACTGGTATTTTCTGCCTaGAAAACAGGCTTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRLVFSA*KTGLKE
Trigger: TTCCTTCAAGCCTGTTTTGCAGGCAGAAAATACCAG...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 90 bp CGTCCATATTTACTGAGCAGGTTAGATACACCGAAACCTAAGACTTaGAAAAATAATCTGGTGGGCTTCACCTTCAATCAGAACGGGCCC +
Preference number: 2 (lower is better)
Translates to: RPYLLSRLDTPKPKT*KNNLVGFTFNQNGP
Trigger: GGGCCCGTTCTGATTGAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAACCTGCTCAGTAAATATGGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 90 bp TTCTACTGGGTTTATCTCCACAAAAAGATTCATAACAAAGGCCAATaGCTGTTCTTCAAACCCCTAGTCAGCCGTATCCCAAAGGACCCG +
Preference number: 2 (lower is better)
Translates to: FYWVYLHKKIHNKGQ*LFFKPLVSRIPKDP
Trigger: CGGGTCCTTTGGGATACGGCTGACTAGGGGTTTGAAGAACAGCAATTGGCCTTTGTTATGAATCTTTTTGTGGAGATAAACCCAGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR GCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGATTATTTCACATTGCATaGCTGTTTCAAGACATCTCA +
Preference number: 2 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRLFHIA*LFQDIS
Trigger: TGAGATGTCTTGAAACAGGCATGCAATGTGAAATAA...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 90 bp CCTGGAACAATAACATCTGGAACGAGACCATCCATGACTAAAGAATaGAATGTAAGCGTTTTCCCTCTTAGCCATGGAGGGAAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: PGTITSGTRPSMTKE*NVSVFPLSHGGKFY
Trigger: ATAAAACTTCCCTCCATGGCTAAGAGGGAAAACGCTTACATTCAATTCTTTAGTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGATGAATTTAGTTCCCTaGAACAATAACATCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWMNLVP*NNNIWN
Trigger: GTTCCAGATGTTATTGTTCCAGGGAACTAAATTCAT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 90 bp TTCAGAGGAAAGAGAACATTTCCATTTCACATGTGCCTTATCAGGTaGATGGTAGATAAAAGCCATTACGTGCTACTTCTTCAAAACACA +
Preference number: 2 (lower is better)
Translates to: FRGKRTFPFHMCLIR*MVDKSHYVLLLQNT
Trigger: TGTGTTTTGAAGAAGTAGCACGTAATGGCTTTTATCTACCATCAACCTGATAAGGCACATGTGAAATGGAAATGTTCTCTTTCCTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR GCA 72 bp TACCTCGAGCAGTGTAGCATGCTGTTACTAAGGCCTTaGCGTGTGCCTAGACAGCGCTTCCCTCCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: YLEQCSMLLLRP*RVPRQRFPPGA
Trigger: GGCCCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTCGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 72 bp ATCTGGTGGGCTTCACCTTCAATCAGAACGGGCCCATaGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: IWWASPSIRTGP*GFSATVTAAAV
Trigger: GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGAAGGTGAAGCCCACCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 72 bp GATGGGTGCAGGCTCCTCCCAGCTGTAAGTTTCTGCTaGCAACCATGGACCTCCAGGGTTTCGGCATCTAGG +
Preference number: 3 (lower is better)
Translates to: DGCRLLPAVSFC*QPWTSRVSASR
Trigger: CCTAGATGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTGCACCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 72 bp CACCCCAACATGCTTCCTGAGGACAGTCAAGCCTCCTaGGATGCAGTGAGTGAGCACCAATGGGCAGGTCTA +
Preference number: 3 (lower is better)
Translates to: HPNMLPEDSQAS*DAVSEHQWAGL
Trigger: TAGACCTGCCCATTGGTGCTCACTCACTGCATCCCAGGAGGCTTGACTGTCCTCAGGAAGCATGTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 72 bp AGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATaGACCTCCAGGGTTTCGGCATCTAGGGCAACCTCT +
Preference number: 3 (lower is better)
Translates to: RLLPAVSFCWQP*TSRVSASRATS
Trigger: AGAGGTTGCCCTAGATGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR GCA 72 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTaGTTTTCCTGTGTGGTCAGTGGGTCAATGTGGGAC +
Preference number: 3 (lower is better)
Translates to: TGVTQKRGCRFR*FSCVVSGSMWD
Trigger: GTCCCACATTGACCCACTGACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 72 bp TGCTTCCTGAGGACAGTCAAGCCTCCTGGGATGCAGTaGGTGAGCACCAATGGGCAGGTCTATAATGGGCAA +
Preference number: 3 (lower is better)
Translates to: CFLRTVKPPGMQ*VSTNGQVYNGQ
Trigger: TTGCCCATTATAGACCTGCCCATTGGTGCTCACTCACTGCATCCCAGGAGGCTTGACTGTCCTCAGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 72 bp AGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCAGTaGGTCAATGTGGGACATCAGGCTATAGTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: RVQVSLLFLCGQ*VNVGHQAIVPR
Trigger: CCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAAAAGCAGCGAAACCTGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 72 bp CTAAAGGTTAAGAGGGAAGCCGATGAGCCACAGGCGTaGCTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: LKVKREADEPQA*LRREGAGFAAF
Trigger: AAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCATCGGCTTCCCTCTTAACCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGATAACAAAATCAAATTaGGGAGGGAATTCCCCCAAA +
Preference number: 3 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGITKSN*GGNSPK
Trigger: TTTGGGGGAATTCCCTCCCAAATTTGATTTTGTTAT...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 72 bp CGTGTGGCTGTGGCTGTTAGGTCTGAAAGGGATGGATaGATAACTAAGCACCACACTGGACGGGTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RVAVAVRSERDG*ITKHHTGRVFP
Trigger: AGGAAAAACCCGTCCAGTGTGGTGCTTAGTTATTCATCCATCCCTTTCAGACCTAACAGCCACAGCCACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTAATATATGGCTGGCTTTaGCTACACTTGTCACTCATG +
Preference number: 3 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLIYGWL*LHLSLM
Trigger: CATGAGTGACAAGTGTAGCAAAAGCCAGCCATATAT...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTACCGAAACCTAAGACTTaGAAAAATAATCTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLPKPKT*KNNLVG
Trigger: GCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGG...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTAATGTGCCTTATCAGGTaGATGGTAGATAAAAGCCAT +
Preference number: 3 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLMCLIR*MVDKSH
Trigger: ATGGCTTTTATCTACCATCAACCTGATAAGGCACAT...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 72 bp TGTGAATGTAAAAGTGAGGCAAAGTCTCTTTCCGTGTaGCTGTGGCTGTTAGGTCTGAAAGGGATGGATGAA +
Preference number: 3 (lower is better)
Translates to: CECKSEAKSLSV*LWLLGLKGMDE
Trigger: TTCATCCATCCCTTTCAGACCTAACAGCCACAGCCACACGGAAAGAGACTTTGCCTCACTTTTACATTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCATGGCTTTTGCTACACTaGTCACTCATGAACTGCTTA +
Preference number: 3 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAWLLLH*SLMNCL
Trigger: TAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCA...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR TCA 72 bp CATCGTACCGTTTCACCTCCCATTAGAGGCTGGTCTTaGACAATAATCCCAGAAGATGAAACTGATGCTGAA +
Preference number: 3 (lower is better)
Translates to: HRTVSPPIRGWS*TIIPEDETDAE
Trigger: TTCAGCATCAGTTTCATCTTCTGGGATTATTGTTCAAGACCAGCCTCTAATGGGAGGTGAAACGGTACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR TCA 72 bp GATATCATTTGTCAAGCTTCCAGCATCTTGTGGTGGTaGACACAAAAAGAAGGTCTGCGTTGTACTGAGGAC +
Preference number: 3 (lower is better)
Translates to: DIICQASSILWW*TQKEGLRCTED
Trigger: GTCCTCAGTACAACGCAGACCTTCTTTTTGTGTTCACCACCACAAGATGCTGGAAGCTTGACAAATGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR TCA 72 bp GTAGCTGGATTGTTTGCAACTCAATGGATAAATGCTTaGGGAGGTAGACACCCCATTCTCCATGATGTGCTT +
Preference number: 3 (lower is better)
Translates to: VAGLFATQWINA*GGRHPILHDVL
Trigger: AAGCACATCATGGAGAATGGGGTGTCTACCTCCTCAAGCATTTATCCATTGAGTTGCAAACAATCCAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CCA 72 bp CGATCAGATCTGGCATCAGGAATGAATTTAGTTCCCTaGAACAATAACATCTGGAACGAGACCATCCATGAC +
Preference number: 3 (lower is better)
Translates to: RSDLASGMNLVP*NNNIWNETIHD
Trigger: GTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCAGGGAACTAAATTCATTCCTGATGCCAGATCTGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CCA 72 bp CATCATCAGATAGATAGTGCTCCTCAAGGGAAATTTTaGCTTGGGGTGGAGGCACATGTTCAAATTTCTGCA +
Preference number: 3 (lower is better)
Translates to: HHQIDSAPQGKF*LGVEAHVQISA
Trigger: TGCAGAAATTTGAACATGTGCCTCCACCCCAAGCCAAAATTTCCCTTGAGGAGCACTATCTATCTGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR-3UTR CAA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCAATAACAAAATCAAATTaGGGAGGGAATTCCCCCAAA +
Preference number: 3 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAITKSN*GGNSPK
Trigger: TTTGGGGGAATTCCCTCCCAAATTTGATTTTGTTAT...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR-3UTR CAA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTTGGCTTTTGCTACACTaGTCACTCATGAACTGCTTA +
Preference number: 3 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSWLLLH*SLMNCL
Trigger: TAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCA...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR GCA 72 bp TGCTTCAGAGGAAAGAGAACATTTCCATTTCACATGTaGCTTATCAGGTTGATGGTAGATAAAAGCCATTAC +
Preference number: 3 (lower is better)
Translates to: CFRGKRTFPFHM*LIRLMVDKSHY
Trigger: GTAATGGCTTTTATCTACCATCAACCTGATAAGGCACATGTGAAATGGAAATGTTCTCTTTCCTCTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCAGCCGCAGCATGGCCTaGGCCTCCGCCCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVSRSMA*ASARSL
Trigger: CAGAGAGCGGGCGGAGGCGCAGGCCATGCTGCGGCT...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCCGGCCTCGCGGAAGTTaGGGCTCAGCCGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFRPRGS*GSAGSP
Trigger: TGGTGACCCGGCTGAGCCCCAACTTCCGCGAGGCCG...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCATGCGGGGCTCGGGATaGGGAGCAGGGGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVMRGSG*GAGAEG
Trigger: CCCTTCCGCCCCTGCTCCCCATCCCGAGCCCCGCAT...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR TCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCAGTCCCGGCTCAGGGTaGCGGCCTCGCGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFSPGSG*RPRGSW
Trigger: CCAACTTCCGCGAGGCCGTCACCCTGAGCCGGGACT...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGGAATGGCGGAGCCCTaGAAGTCCAGGAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACGMAEP*KSRKWR
Trigger: CCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCCGGTGCACAGGGCGATaGGACATACCGTACCTCGAG +
Preference number: 4 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVRCTGR*DIPYLE
Trigger: CTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCG...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp GCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGCAACAAATCTCTGCGTaGGGGTCCGCAGCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: ATGVTQKRGCRFRCFSCVQQISA*GSAARA
Trigger: GGCGCGAGCTGCGGACCCTCACGCAGAGATTTGTTG...CACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR GCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGCAGGCGCAAAGCGAATaGGGGGCTCGGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLQAQSE*GARDGE
Trigger: CTCCCCATCCCGAGCCCCGCATTCGCTTTGCGCCTG...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR TCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCCGAGCTCTTTCAGGCTaGTGTATGCGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACRALSG*CMRWCH
Trigger: GTGGCACCACCGCATACATCAGCCTGAAAGAGCTCG...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCGCCCGTGTTTTGTGGTaGACCCCCACTGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVARVLW*TPTENG
Trigger: TCCATTCTCAGTGGGGGTTCACCACAAAACACGGGC...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCCCCAACATGCTTCCTaGGGACAGTCAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGPQHAS*GQSSLL
Trigger: CAGGAGGCTTGACTGTCCTCAGGAAGCATGTTGGGG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGCCTCCTGGGATGCAGTaGGTGAGCACCAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLPPGMQ*VSTNGQ
Trigger: CTGCCCATTGGTGCTCACTCACTGCATCCCAGGAGG...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGCCCGTTCCCCCAGCTaGTGCTGTCACCAAAACTTT +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACARSPS*CCHQNF
Trigger: AAAGTTTTGGTGACAGCAGCAGCTGGGGGAACGGGC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGGCTGGCAATGTTCCTaGTTTCACAGGCGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACGWQCS*FHRRKA
Trigger: GGCCTTTCGCCTGTGAAAGCAGGAACATTGCCAGCC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCACAGCGCTTCCCTCCTaGGGCCCGTGTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVTALPS*GPCFVV
Trigger: CACCACAAAACACGGGCCCCAGGAGGGAAGCGCTGT...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCGGTGCACAGGGCGATaGGACATACCGTACCTCGAG +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFRCTGR*DIPYLE
Trigger: CTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCG...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGATCAGAACGGGCCCATaGGGTTTCAGCGCAACGGTG +
Preference number: 4 (lower is better)
Translates to: ATGVTQKRGCRFRCFSCVIRTGP*GFSATV
Trigger: CACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGAT...CACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGACAGTCAAGCCTCCTaGGATGCAGTGAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACDSQAS*DAVSEH
Trigger: GTGCTCACTCACTGCATCCCAGGAGGCTTGACTGTC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 72 bp GGACTGCAGAGAAGTCACCTGGCGGATGGGAGGGCATaGGCCAGTGTTCCAGCTTCACTTCTGAGTCCAACG +
Preference number: 4 (lower is better)
Translates to: GLQRSHLADGRA*ASVPASLLSPT
Trigger: CGTTGGACTCAGAAGTGAAGCTGGAACACTGGCCAATGCCCTCCCATCCGCCAGGTGACTTCTCTGCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGGATGAGCCACAGGCGTaGCTCAGAAGAGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLDEPQA*LRREGA
Trigger: TGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCATC...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCGTTTCAGCGCAACGGTaGCAGCGGCAGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFVSAQR*QRQQSS
Trigger: TGAAGACTGCTGCCGCTGTCACCGTTGCGCTGAAAC...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGGTTTCAGCGCAACGGTaGCAGCGGCAGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLVSAQR*QRQQSS
Trigger: TGAAGACTGCTGCCGCTGTCACCGTTGCGCTGAAAC...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCCCTTCAGGGTACTCCTaGTTAAGGACGGTACCTACG +
Preference number: 4 (lower is better)
Translates to: APPSCKFLLATMDLQGFGPSGYS*LRTVPT
Trigger: CGTAGGTACCGTCCTTAAGCAGGAGTACCCTGAAGG...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCCTTCAGGGTACTCCTaGTTAAGGACGGTACCTACG +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGPSGYS*LRTVPT
Trigger: CGTAGGTACCGTCCTTAAGCAGGAGTACCCTGAAGG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCCAGCTGTAAGTTTCTaGTGGCAACCATGGACCTCC +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGPAVSF*WQPWTS
Trigger: GGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCTTTCCGTGTGGCTGTaGCTGTTAGGTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGLSVWL*LLGLKG
Trigger: CCCTTTCAGACCTAACAGCCACAGCCACACGGAAAG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCCCTCAAGGGAAATTTTaGCTTGGGGTGGAGGCACAT +
Preference number: 4 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVPQGKF*LGVEAH
Trigger: ATGTGCCTCCACCCCAAGCCAAAATTTCCCTTGAGG...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCGCTGTAAGTTTCTGCTaGCAACCATGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APPSCKFLLATMDLQGFGAVSFC*QPWTSR
Trigger: CCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGC...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCAAAGGGAGGCTTAACTaGGGGGTCATAGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSKGRLN*GVIAAC
Trigger: GCAGGCCGCTATGACCCCTCAGTTAAGCCTCCCTTT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTTGAGCCCAAGAGTTTaGGACCAGCCTGGGCAACGA +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLLSPRV*DQPGQR
Trigger: TCGTTGCCCAGGCTGGTCTCAAACTCTTGGGCTCAA...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGTCACCACCAGCTTCTaGATGGCTTGGGGAATGGCG +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSVTTSF*MAWGMA
Trigger: CGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGAC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCCACCACCTCCCCAATaGCTTCGAAACCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGPPPPQ*LRNLCQ
Trigger: TTGACATAGGTTTCGAAGGCATTGGGGAGGTGGTGG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCCTGTTACTAAGGCCTTaGCGTGTGCCTAGACAGCGC +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVLLLRP*RVPRQR
Trigger: GCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAG...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGACTCAGAAGAGAGGGTaGAGGTTTCGCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGTQKRG*RFRCFS
Trigger: GGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGT...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGCCAGGAGGTCAAGGCTaGAGTGAACTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLPGGQG*SELRSR
Trigger: GCGTGATCTCAGTTCACTGCAGCCTTGACCTCCTGG...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCGATGGTAAAGGGGACTaGAGAGAAGTCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFDGKGD*REVTWR
Trigger: CCGCCAGGTGACTTCTCTGCAGTCCCCTTTACCATC...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCTGGAGTTGCAATGCTaGCAGGCACAACTGTGTACT +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGLELQC*QAQLCT
Trigger: AGTACACAGTTGTGCCTGCCAGCATTGCAACTCCAG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCAAGCTGCATGGCAAACTaGCCCGTTCCCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISSCMAN*PVPPAA
Trigger: AGCAGCTGGGGGAACGGGCCAGTTTGCCATGCAGCT...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCCTTGAGCAGTTTGGCTaGCAATGTTCCTGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVLEQFG*QCSCFH
Trigger: GTGAAAGCAGGAACATTGCCAGCCAAACTGCTCAAG...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGAGTAAACCTGCCCTCTaGAGACAGATCTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGSKPAL*RQISKV
Trigger: GACCTTGGAGATCTGTCTCCAGAGGGCAGGTTTACT...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCAACAGCGCTTCCCTCCTaGGGCCCGTGTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISTALPS*GPCFVV
Trigger: CACCACAAAACACGGGCCCCAGGAGGGAAGCGCTGT...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCTCAGGAGACTGAGGTaGGAGGATGGCTTGAACCAG +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFLRRLR*EDGLNQ
Trigger: CTGGTTCAAGCCATCCTCCCACCTCAGTCTCCTGAG...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACCACAAGAGCCAGAGATaGGTGCAGGCTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYHKSQR*VQAPPS
Trigger: GCTGGGAGGAGCCTGCACCCATCTCTGGCTCTTGTG...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACGGTGGGAGGATGGCTTaGACCAGGGAGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYGGRMA*TREVEV
Trigger: AACCTCAACCTCCCTGGTTCAAGCCATCCTCCCACC...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGACTGTGTGCATGCAGTaGGCGCAGGATTCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGTVCMQ*AQDSSN
Trigger: ATTACTAGAATCCTGCGCTCACTGCATGCACACAGT...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR GCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGCCCGTTCCCCCAGCTaGTGCTGTCACCAAAACTTT +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSARSPS*CCHQNF
Trigger: AAAGTTTTGGTGACAGCAGCAGCTGGGGGAACGGGC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCGGGTGCAGGTTTCGCTaGTTTTCCTGTGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVGCRFR*FSCVVS
Trigger: ACTGACCACACAGGAAAAGCAGCGAAACCTGCACCC...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCAGTAAACCTGCCCTCTaGAGACAGATCTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFSKPAL*RQISKV
Trigger: GACCTTGGAGATCTGTCTCCAGAGGGCAGGTTTACT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 72 bp CTCGAGGACAATGTGGACCACAGAGCCCCTTTAGTCTaGCTGCTGTGTCACACTAGCTACTCAGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LEDNVDHRAPLV*LLCHTSYSARE
Trigger: TTCCCTGGCTGAGTAGCTAGTGTGACACAGCAGCAAGACTAAAGGGGCTCTGTGGTCCACATTGTCCTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCGTCATAGCGGCCTGCTaGATAGTTGATGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVVIAAC*IVDVRC
Trigger: GCATCTGACATCAACTATTCAGCAGGCCGCTATGAC...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGAGCATCTTGTGGTGGTaGACACAAAAAGAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGSILWW*TQKEGL
Trigger: CAGACCTTCTTTTTGTGTTCACCACCACAAGATGCT...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCAGCAAAAGAACCAGGTaGCATGTAAGCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFSKRTR*HVSHSL
Trigger: CAAGCTGTGGCTTACATGGCACCTGGTTCTTTTGCT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTTTCAGGCTGATGTATaGGGTGGTGCCACTTACCAG +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVFQADV*GGATYQ
Trigger: CTGGTAAGTGGCACCACCGCATACATCAGCCTGAAA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACGGCTGGCAATGTTCCTaGTTTCACAGGCGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYGWQCS*FHRRKA
Trigger: GGCCTTTCGCCTGTGAAAGCAGGAACATTGCCAGCC...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTAGGGTGCAGGTTTCGCTaGTTTTCCTGTGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLGCRFR*FSCVVS
Trigger: ACTGACCACACAGGAAAAGCAGCGAAACCTGCACCC...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGTTTTTCCTAGTCCCCTaGACCAGTAACCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGFFLVP*TSNPLL
Trigger: TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAA...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCTTGAAACTGTGTGCATaGAGTGAGCGCAGGATTCTA +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACLKLCA*SERRIL
Trigger: TAGAATCCTGCGCTCACTGCATGCACACAGTTTCAA...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR GCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACACACCAACAAATCTCTaGGTGAGGGTCCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYTPTNL*VRVRSS
Trigger: CGAGCTGCGGACCCTCACGCAGAGATTTGTTGGTGT...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR CCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCCAGCCAAGTCAAACATaGCTCCCCCAACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFQPSQT*LPQQIH
Trigger: ATGAATCTGTTGGGGGAGCCATGTTTGACTTGGCTG...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCATGGTAACAGATCACTaGGACTCCTTGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVMVTDH*DSLVSQ
Trigger: TTGAGAAACCAAGGAGTCCCAGTGATCTGTTACCAT...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTATTCTTCCTTGAGATaGCTGAGGTCTCTACGGTGC +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLYSSLR*LRSLRC
Trigger: GCACCGTAGAGACCTCAGTCATCTCAAGGAAGAATA...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGGCAGCTATTTACCGTaGCATTTCCCTTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSGSYLP*HFPSVQ
Trigger: CTGCACTGAAGGGAAATGTCACGGTAAATAGCTGCC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGTCTGAAAGGGATGGATaGATAACTAAGCACCACACT +
Preference number: 4 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGSERDG*ITKHHT
Trigger: AGTGTGGTGCTTAGTTATTCATCCATCCCTTTCAGA...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCACCCTCCCATTAAAATaGAACAAACCGGGACTCACT +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFTLPLK*NKPGLT
Trigger: AGTGAGTCCCGGTTTGTTTCATTTTAATGGGAGGGT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCACAAGGGGGATAGCATaGTGCTATAAGCCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFTRGIA*CYKPRK
Trigger: TTTCCTAGGCTTATAGCATCATGCTATCCCCCTTGT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTATTTCAGGCTGATGTATaGGGTGGTGCCACTTACCAG +
Preference number: 4 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLFQADV*GGATYQ
Trigger: CTGGTAAGTGGCACCACCGCATACATCAGCCTGAAA...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGCAGTAAGGTTCTCATaGCAAGCATTCCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACAVRFS*QAFLLL
Trigger: TAAAAGGAGGAATGCTTGGCATGAGAACCTTACTGC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCATCTTTGAAAGCTGCATaGCAAACTGGCCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISSLKAA*QTGPFP
Trigger: GGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGA...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGACGGATGGGAGGGCATTaGCCAGTGTTCCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRRMGGH*PVFQLH
Trigger: GTGAAGCTGGAACACTGGCCAATGCCCTCCCATCCG...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCAAAAGGGAGGCTTAACTaGGGGGTCATAGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAKGRLN*GVIAAC
Trigger: GCAGGCCGCTATGACCCCTCAGTTAAGCCTCCCTTT...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCAGCCATAACATTCAGTaGAGCCATTATTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACSHNIQ*SHYLVP
Trigger: TGGAACCAAATAATGGCTTCACTGAATGTTATGGCT...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCGCTTCTCAACATACATaGAGACGTATTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACASQHT*RRIGFL
Trigger: GAGAAAACCAATACGTCTTCATGTATGTTGAGAAGC...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGACTGAGGTCTCTACGGTaGACAGGGCGATGGGACATA +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRLRSLR*TGRWDI
Trigger: TATGTCCCATCGCCCTGTGCACCGTAGAGACCTCAG...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTACGACATGTCCACGATaGCCCGGGCCCCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESTTCPR*PGPRWA
Trigger: TGCCCACCGGGGCCCGGGCCATCGTGGACATGTCGT...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCATTCCTGTGTGGTCAGTaGGTCAATGTGGGACATCAG +
Preference number: 4 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISFLCGQ*VNVGHQ
Trigger: CTGATGTCCCACATTGACCCACTGACCACACAGGAA...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCAGGGAAATTTTGGCTTaGGGTGGAGGCACATGTTCA +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSREILA*GGGTCS
Trigger: TGAACATGTGCCTCCACCCCAAGCCAAAATTTCCCT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGATTCTGCTGGCAACCATaGACCTCCAGGGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRFCWQP*TSRVSA
Trigger: TGCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAA...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGAATGGGAATGCAGAATaGGTGGCTGCTATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLNGNAE*VAAILF
Trigger: AAACAGAATAGCAGCCACTCATTCTGCATTCCCATT...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGGATGAGCCACAGGCGTaGCTCAGAAGAGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWDEPQA*LRREGA
Trigger: TGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCATC...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTCTGAAAGGGATGGATaGATAACTAAGCACCACACT +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVSERDG*ITKHHT
Trigger: AGTGTGGTGCTTAGTTATTCATCCATCCCTTTCAGA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCATTAGAGGCTGGTCTTaGACAATAATCCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFIRGWS*TIIPED
Trigger: ATCTTCTGGGATTATTGTTCAAGACCAGCCTCTAAT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCACCACACTGGACGGGTTTTTCCTAGTCCCCTGCACCAGTAACCCTTTGCTACAATGGATAAATGCTTaGGGAGGTAGACACCCCATT +
Preference number: 4 (lower is better)
Translates to: STTLDGFFLVPCTSNPLLQWINA*GGRHPI
Trigger: AATGGGGTGTCTACCTCCTCAAGCATTTATCCATTG...TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAACCCGTCCAGTGTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGAGGCAGGAAAGTCACTTaGGCCCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRGRKVT*AQEFET
Trigger: GGTCTCAAACTCTTGGGCTCAAGTGACTTTCCTGCC...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCAAGTGGCTCATGGCTaGTTGATACTTAGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFQVAHG*LILRKV
Trigger: TACCTTTCTAAGTATCAAGCAGCCATGAGCCACTTG...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCGGCTTTCCATTTCACATGTaGCTTATCAGGTTGATGGTA +
Preference number: 4 (lower is better)
Translates to: APPSCKFLLATMDLQGFGFPFHM*LIRLMV
Trigger: TACCATCAACCTGATAAGGCACATGTGAAATGGAAA...GCCGAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTGCAGAATGAGTGGCTaGTATTCTGTTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVCRMSG*YSVSRI
Trigger: GATTCTGGAAACAGAATAGCAGCCACTCATTCTGCA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGCAGTAGGATTTCCTTaGTCCTCAGATGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSAVGFP*SSDGRK
Trigger: TTTCCTTCCATCTGAGGAGCAAGGAAATCCTACTGC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGGCACCAGTAACCCTTTaGTATAATGAGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLAPVTL*YNEDTK
Trigger: CTTTGTGTCCTCATTATAGCAAAGGGTTACTGGTGC...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCACTTGAGCAGTTTGGCTaGCAATGTTCCTGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISLEQFG*QCSCFH
Trigger: GTGAAAGCAGGAACATTGCCAGCCAAACTGCTCAAG...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCTGGAACAATAACATCTaGAACGAGACCATCCATGAC +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFWNNNI*NETIHD
Trigger: GTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCA...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCGCACTCCAGCCTGGGTaGCAGAGCCGAGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFALQPG*QSRGLV
Trigger: GACAAGACCTCGGCTCTGTCACCCAGGCTGGAGTGC...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGAGCCTTCTTTGAAAGCTaGATGGCAAACTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRAFFES*MANWPV
Trigger: AACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGC...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCAAAAAGTCTGTACTTTaGCCCAGCGCTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSKKSVL*PSASQH
Trigger: ATGTTGAGAAGCGCTGGGCCAAAGTACAGACTTTTT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCAATTTTGGCTTGGGGTaGAGGCACATGTTCAAATTT +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVNFGLG*RHMFKF
Trigger: AAATTTGAACATGTGCCTCCACCCCAAGCCAAAATT...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 72 bp AGTCATAACCAAATGGTAACAGATCACTGGGACTCCTaGGTTTCTCAAAGAGGCAAGCTCCTTCCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SHNQMVTDHWDS*VSQRGKLLPPC
Trigger: GCAGGGTGGAAGGAGCTTGCCTCTTTGAGAAACCAAGGAGTCCCAGTGATCTGTTACCATTTGGTTATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGCGCTGGCAGATTTCTTaGGCAGTTTGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWRWQIS*AVWLAM
Trigger: CATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCG...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTTTACAGCTTACTGTTaGCAGAGTGAGGTAATTCAA +
Preference number: 4 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLFTAYC*QSEVIQ
Trigger: TTGAATTACCTCACTCTGTCAACAGTAAGCTGTAAA...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCCGACACAGAATCAAATaGTCTGGAATCCTAATTGTG +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSRHRIK*SGILIV
Trigger: CACAATTAGGATTCCAGATCATTTGATTCTGTGTCG...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTTTCCATTTCACATGTaGCTTATCAGGTTGATGGTA +
Preference number: 4 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVFPFHM*LIRLMV
Trigger: TACCATCAACCTGATAAGGCACATGTGAAATGGAAA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCTTGTATTGTTGTGCATaGATGCTAGCAGCTACATTA +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFLYCCA*MLAATL
Trigger: TAATGTAGCTGCTAGCATGCATGCACAACAATACAA...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTGCATGGCTTGGGGAATaGCGGAGCCCTGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESAWLGE*RSPGSP
Trigger: TGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGC...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCCCACCAGCTTCTGCATaGCTTGGGGAATGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFPPASA*LGEWRS
Trigger: GCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGG...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCACTGGAGTTGCAATGCTaGCAGGCACAACTGTGTACT +
Preference number: 4 (lower is better)
Translates to: WECRMSGCYSVSRIRGNALELQC*QAQLCT
Trigger: AGTACACAGTTGTGCCTGCCAGCATTGCAACTCCAG...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTAGCTGCATGGCAAACTaGCCCGTTCCCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSSCMAN*PVPPAA
Trigger: AGCAGCTGGGGGAACGGGCCAGTTTGCCATGCAGCT...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCATGAATTTAGTTCCCTaGAACAATAACATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFMNLVP*NNNIWN
Trigger: GTTCCAGATGTTATTGTTCCAGGGAACTAAATTCAT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCATTCCTGTGTGGTCAGTaGGTCAATGTGGGACATCAG +
Preference number: 4 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAFLCGQ*VNVGHQ
Trigger: CTGATGTCCCACATTGACCCACTGACCACACAGGAA...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCAGAATCAAATGATCTaGAATCCTAATTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFQNQMI*NPNCAG
Trigger: TCCAGCACAATTAGGATTCCAGATCATTTGATTCTG...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTCGAGCTCTTTCAGGCTaGTGTATGCGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESRALSG*CMRWCH
Trigger: GTGGCACCACCGCATACATCAGCCTGAAAGAGCTCG...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTCTGGGATGCAGTGAGTaGGCACCAATGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESLGCSE*APMGRS
Trigger: AGACCTGCCCATTGGTGCTCACTCACTGCATCCCAG...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCAAAGGCTGCAGTGAACTaGGATCACGCTACTGTACTT +
Preference number: 4 (lower is better)
Translates to: WECRMSGCYSVSRIRGNAKAAVN*DHATVL
Trigger: AAGTACAGTAGCGTGATCTCAGTTCACTGCAGCCTT...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp TGGGAATGCAGAATGAGTGGCTGCTATTCTGTTTCCAGAATCAGAGGTAACGCAAGCAAAAGAACCAGGTaGCATGTAAGCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: WECRMSGCYSVSRIRGNASKRTR*HVSHSL
Trigger: CAAGCTGTGGCTTACATGGCACCTGGTTCTTTTGCT...TGCGTTACCTCTGATTCTGGAAACAGAATAGCAGCCACTCATTCTGCATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCACCAGTCATTTCCTGTaGACAGTTACATTCATAAAA +
Preference number: 4 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFTSHFL*TVTFIK
Trigger: TTTTATGAATGTAACTGTGCACAGGAAATGACTGGT...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTTGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCC +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSWKSRK*RAYDMS
Trigger: GGACATGTCGTACGCCCGCCACTTCCTGGACTTCCA...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCATCAGAACGGGCCCATaGGGTTTCAGCGCAACGGTG +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFIRTGP*GFSATV
Trigger: CACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGAT...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAAAGTCACCTGGCGGATaGGAGGGCATTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIKSPGG*EGIGQC
Trigger: ACACTGGCCAATGCCCTCCCATCCGCCAGGTGACTT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTTGCAGAGAAGTCACCTaGCGGATGGGAGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSCREVT*RMGGHW
Trigger: CCAATGCCCTCCCATCCGCCAGGTGACTTCTCTGCA...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACTTTACAGCTTACTGTTaGCAGAGTGAGGTAATTCAA +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYFTAYC*QSEVIQ
Trigger: TTGAATTACCTCACTCTGTCAACAGTAAGCTGTAAA...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTGTGGTGAACCCCCACTaGGAATGGAGCGCACACTTT +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSVVNPH*EWSAHF
Trigger: AAAGTGTGCGCTCCATTCTCAGTGGGGGTTCACCAC...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGCCTGCAAAACAGGCTTaGAGGAATAGCATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWPAKQA*RNSIWL
Trigger: GAGCCAAATGCTATTCCTTCAAGCCTGTTTTGCAGG...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGAAAAGGAACCCCTAAATaGCACTGCTGGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRKGTPK*HCWYFL
Trigger: CAGAAAATACCAGCAGTGTCATTTAGGGGTTCCTTT...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTCTGTTACTAAGGCCTTaGCGTGTGCCTAGACAGCGC +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSLLLRP*RVPRQR
Trigger: GCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAG...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCCTGAGGTCTCTACGGTaGACAGGGCGATGGGACATA +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFLRSLR*TGRWDI
Trigger: TATGTCCCATCGCCCTGTGCACCGTAGAGACCTCAG...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCACCAGTCATTTCCTGTaGACAGTTACATTCATAAAA +
Preference number: 4 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSTSHFL*TVTFIK
Trigger: TTTTATGAATGTAACTGTGCACAGGAAATGACTGGT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCAGTTTGAGACCAGCCTaGGCAACGAGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFSLRPA*ATRETL
Trigger: CAAGGTCTCCCTCGTTGCCCAGGCTGGTCTCAAACT...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTTCCCAGCACTTTGGATaGCCGAGGCAGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSSQHFG*PRQESH
Trigger: GTGACTTTCCTGCCTCGGCCATCCAAAGTGCTGGGA...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTCGCTGGCAGATTTCTTaGGCAGTTTGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSRWQIS*AVWLAM
Trigger: CATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCG...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ATGGGCAGGTCTATAATGGGCAAGAATAGACTCGAGGACAATGTGGACCACAGACCATGTACATATAATTaGCAGCACGGAATATGGACT +
Preference number: 4 (lower is better)
Translates to: MGRSIMGKNRLEDNVDHRPCTYN*QHGIWT
Trigger: AGTCCATATTCCGTGCTGTCAATTATATGTACATGG...TCTGTGGTCCACATTGTCCTCGAGTCTATTCTTGCCCATTATAGACCTGCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGTCTTTAGTGCAGTTGTaGCACTTCGGCATGATCCAT +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWSLVQL*HFGMIH
Trigger: ATGGATCATGCCGAAGTGTCACAACTGCACTAAAGA...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACTTATTTCACATTGCATaGCTGTTTCAAGACATCTCA +
Preference number: 4 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYLFHIA*LFQDIS
Trigger: TGAGATGTCTTGAAACAGGCATGCAATGTGAAATAA...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTCTTTGAAAGCTGCATaGCAAACTGGCCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFSLKAA*QTGPFP
Trigger: GGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGA...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCCTTTCCGTGTGGCTGTaGCTGTTAGGTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFLSVWL*LLGLKG
Trigger: CCCTTTCAGACCTAACAGCCACAGCCACACGGAAAG...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCAAGGATTCGCGCATTTaGAGACCCTCCTTGTACCCC +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFKDSRI*RPSLYP
Trigger: GGGGTACAAGGAGGGTCTCCAAATGCGCGAATCCTT...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR TCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAGTCATAGCGGCCTGCTaGATAGTTGATGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIVIAAC*IVDVRC
Trigger: GCATCTGACATCAACTATTCAGCAGGCCGCTATGAC...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTCCACCACCTCCCCAATaGCTTCGAAACCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSPPPPQ*LRNLCQ
Trigger: TTGACATAGGTTTCGAAGGCATTGGGGAGGTGGTGG...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTGCCTTCTTTGAAAGCTaGATGGCAAACTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSAFFES*MANWPV
Trigger: AACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGC...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCACTCAGAAGAGAGGGTaGAGGTTTCGCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFTQKRG*RFRCFS
Trigger: GGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGT...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGGCACCAGTAACCCTTTaGTATAATGAGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWAPVTL*YNEDTK
Trigger: CTTTGTGTCCTCATTATAGCAAAGGGTTACTGGTGC...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGGAAAACAGCATGCAGTaGACTTTCTTAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWENSMQ*TFLVWG
Trigger: TCCCCAAACTAAGAAAGTGCACTGCATGCTGTTTTC...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
3UTR CAA 72 bp ATAACATCTGGAACGAGACCATCCATGACTAAAGAATaGAATGTAAGCGTTTTCCCTCTTAGCCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: ITSGTRPSMTKE*NVSVFPLSHGG
Trigger: CCCTCCATGGCTAAGAGGGAAAACGCTTACATTCAATTCTTTAGTCATGGATGGTCTCGTTCCAGATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTATTCTTCCTTGAGATaGCTGAGGTCTCTACGGTGC +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFYSSLR*LRSLRC
Trigger: GCACCGTAGAGACCTCAGTCATCTCAAGGAAGAATA...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGAGCCATAACATTCAGTaGAGCCATTATTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWSHNIQ*SHYLVP
Trigger: TGGAACCAAATAATGGCTTCACTGAATGTTATGGCT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGACACCCCATTCTCCATaGTGTGCTTATTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWTPHSP*CAYLFH
Trigger: GTGAAATAAATAAGCACATCATGGAGAATGGGGTGT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATACAGCCAAGTCAAACATaGCTCCCCCAACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIQPSQT*LPQQIH
Trigger: ATGAATCTGTTGGGGGAGCCATGTTTGACTTGGCTG...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCATCACTGGGACTCCTTaGTTTCTCAAAGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFITGTP*FLKEAS
Trigger: GCTTGCCTCTTTGAGAAACCAAGGAGTCCCAGTGAT...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTCAGTTTAAAAGCAACTaGGGCATGTTGCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSQFKSN*GMLRWL
Trigger: AAGCCACCGCAACATGCCCCAGTTGCTTTTAAACTG...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTTCTTTAGTGCAGTTGTaGCACTTCGGCATGATCCAT +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESSLVQL*HFGMIH
Trigger: ATGGATCATGCCGAAGTGTCACAACTGCACTAAAGA...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTAGGTCTGCGTTGTACTaGGGACATTACATCCTCATT +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSRSALY*GHYILI
Trigger: AATGAGGATGTAATGTCCTCAGTACAACGCAGACCT...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTGCAGTAGGATTTCCTTaGTCCTCAGATGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSAVGFP*SSDGRK
Trigger: TTTCCTTCCATCTGAGGAGCAAGGAAATCCTACTGC...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTTTTTTCCTAGTCCCCTaGACCAGTAACCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSFFLVP*TSNPLL
Trigger: TAGCAAAGGGTTACTGGTGCAGGGGACTAGGAAAAA...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGATCTTTCATATTAGATaGTACCACCTATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWIFHIR*YHLCAG
Trigger: TCCTGCACATAGGTGGTAGCATCTAATATGAAAGAT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGTACATCCTCATTAGCTaGAATGTTCCTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWYILIS*NVPQVH
Trigger: ATGTACTTGAGGAACATTCCAGCTAATGAGGATGTA...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAACAAGAAAGACACACTaGGAAGGATTCGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSITRKTH*EGFAHL
Trigger: CAAATGCGCGAATCCTTCCCAGTGTGTCTTTCTTGT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR TCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAAATGGGAATGCAGAATaGGTGGCTGCTATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSINGNAE*VAAILF
Trigger: AAACAGAATAGCAGCCACTCATTCTGCATTCCCATT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTTCATGGTCAGAACCGTaGTACTTCTACTGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSSWSEP*YFYWVY
Trigger: ATAAACCCAGTAGAAGTATCACGGTTCTGACCATGA...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTCAAGTGGCTCATGGCTaGTTGATACTTAGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESQVAHG*LILRKV
Trigger: TACCTTTCTAAGTATCAAGCAGCCATGAGCCACTTG...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCTGCAGAATGAGTGGCTaGTATTCTGTTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFCRMSG*YSVSRI
Trigger: GATTCTGGAAACAGAATAGCAGCCACTCATTCTGCA...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTCTGGTATTTTCTGCCTaGAAAACAGGCTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSLVFSA*KTGLKE
Trigger: TTCCTTCAAGCCTGTTTTGCAGGCAGAAAATACCAG...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTTGGAACAATAACATCTaGAACGAGACCATCCATGAC +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESWNNNI*NETIHD
Trigger: GTCATGGATGGTCTCGTTCCAGATGTTATTGTTCCA...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCCCATGTACATATAATTaGCAGCACGGAATATGGACT +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFPCTYN*QHGIWT
Trigger: AGTCCATATTCCGTGCTGTCAATTATATGTACATGG...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR TCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATATACACTTGTCACTCATaGACTGCTTATGAGCATAAG +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIYTCHS*TAYEHK
Trigger: CTTATGCTCATAAGCAGTTCATGAGTGACAAGTGTA...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTCACAAAAAGAAGGTCTaGGTTGTACTGAGGACATTA +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESHKKKV*VVLRTL
Trigger: TAATGTCCTCAGTACAACGCAGACCTTCTTTTTGTG...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CCA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTTGGCATTATCTGAATaGGCGGAATCTTTCATGCTT +
Preference number: 4 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFLALSE*AESFML
Trigger: AAGCATGAAAGATTCCGCCCATTCAGATAATGCCAA...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAATTTTTGGCATTATCTaGATGGGCGGAATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIIFGII*MGGIFH
Trigger: ATGAAAGATTCCGCCCATTCAGATAATGCCAAAAAT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR TCA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTGGCATGTGTCTTAAATaGTATCATTTGTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESGMCLK*YHLSSF
Trigger: GAAGCTTGACAAATGATATCATTTAAGACACATGCC...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTATAGTTGATGTCAGATaGGTTAACACCAACAAATCG +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSIVDVR*VNTNKS
Trigger: CGATTTGTTGGTGTTAACGCATCTGACATCAACTAT...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATATTGTATTGTTGTGCATaGATGCTAGCAGCTACATTA +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSILYCCA*MLAATL
Trigger: TAATGTAGCTGCTAGCATGCATGCACAACAATACAA...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCCTGAAAATATATGGCTaGCTTTTGCTACACTTGTCA +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFLKIYG*LLLHLS
Trigger: TGACAAGTGTAGCAAAAGCCAGCCATATATTTTCAG...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CCA 90 bp GCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTCTGAAAATATATGGCTaGCTTTTGCTACACTTGTCA +
Preference number: 4 (lower is better)
Translates to: AITCYFFKTHLCSRNHFSLKIYG*LLLHLS
Trigger: TGACAAGTGTAGCAAAAGCCAGCCATATATTTTCAG...AGAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
3UTR CAA 72 bp AAGAGAACATTTCCATTTCACATGTGCCTTATCAGGTaGATGGTAGATAAAAGCCATTACGTGCTACTTCTT +
Preference number: 4 (lower is better)
Translates to: KRTFPFHMCLIR*MVDKSHYVLLL
Trigger: AAGAAGTAGCACGTAATGGCTTTTATCTACCATCAACCTGATAAGGCACATGTGAAATGGAAATGTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR GCA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAAAAAAGACTGACAATTaGCCTGAATTATGGATGTAC +
Preference number: 4 (lower is better)
Translates to: NIWLAFATLVTHELLMSIKKTDN*PELWMY
Trigger: GTACATCCATAATTCAGGGCAATTGTCAGTCTTTTT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR GCA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCATAGTTGATGTCAGATaGGTTAACACCAACAAATCT +
Preference number: 4 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFIVDVR*VNTNKS
Trigger: AGATTTGTTGGTGTTAACGCATCTGACATCAACTAT...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537114.2
3UTR CAA 72 bp CTATTCTGTAGCTTAAGGGATCCATCAGTTAAAATGTaGGTCTTTCATCTTTATTACCCTCCCATTAAAATG +
Preference number: 4 (lower is better)
Translates to: LFCSLRDPSVKM*VFHLYYPPIKM
Trigger: CATTTTAATGGGAGGGTAATAAAGATGAAAGACCAACATTTTAACTGATGGATCCCTTAAGCTACAGAATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp AGCCCTGGAAGTCCAGGAAGTGGCGGGCGTACGACATGTCCACGATaGCCCGGGCCCCGGTGGGCACCAGCCGCAGCATGGCCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: SPGSPGSGGRTTCPR*PGPRWAPAAAWPAP
Trigger: AGGCGCAGGCCATGCTGCGGCTGGTGCCCACCGGGGCCCGGGCCATCGTGGACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp TTCTGCATGGCTTGGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCCACGATGGCCCGGGCCCCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: FCMAWGMAEPWKSRK*RAYDMSTMARAPVG
Trigger: GCCCACCGGGGCCCGGGCCATCGTGGACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp CCTCGCGGAAGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATaGCTTGGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: PRGSWGSAGSPPASA*LGEWRSPGSPGSGG
Trigger: CCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS GCA 90 bp ACGGCCTCGCGGAAGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTaGATGGCTTGGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: TASRKLGLSRVTTSF*MAWGMAEPWKSRKW
Trigger: CCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCGCGAGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp CGGAAGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGCTTaGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTGGCGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: RKLGLSRVTTSFCMA*GMAEPWKSRKWRAY
Trigger: GTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp CGGGTCACCACCAGCTTCTGCATGGCTTGGGGAATGGCGGAGCCCTaGAAGTCCAGGAAGTGGCGGGCGTACGACATGTCCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: RVTTSFCMAWGMAEP*KSRKWRAYDMSTMA
Trigger: GGCCATCGTGGACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp TGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGCTTGGGGAATaGCGGAGCCCTGGAAGTCCAGGAAGTGGCGGGCGTACGACATGT +
Preference number: 5 (lower is better)
Translates to: WGSAGSPPASAWLGE*RSPGSPGSGGRTTC
Trigger: ACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp ACAAGTTCAAGCGCAGCAGGCGCAAAGCGAATGCGGGGCTCGGGATaGGGAGCAGGGGCGGAAGGGCCAGGGAGCCACAGAAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: TSSSAAGAKRMRGSG*GAGAEGPGSHRKTR
Trigger: TCTTGTCTTTCTGTGGCTCCCTGGCCCTTCCGCCCCTGCTCCCCATCCCGAGCCCCGCATTCGCTTTGCGCCTGCTGCGCTTGAACTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR CAA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCCAGCTTCTGCATGGCTaGGGGAATGGCGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVQLLHG*GNGGAL
Trigger: CAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTG...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp CTCTACGGTGCACAGGGCGATGGGACATACCGTACCTCGAGCAGTGTAGCATGCACGCTGGCAGATTTCTaGAGCAGTTTGGCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: LYGAQGDGTYRTSSSVACTLADF*SSLAGN
Trigger: ATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGT...GCATGCTACACTGCTCGAGGTACGGTATGTCCCATCGCCCTGTGCACCGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS CCA 90 bp ATTGACAGCACGGAATATGGACTCCAGGCCAGTAAACCTGCCCTCTaGAGACAGATCTCCAAGGTCCACCTCACAAACCAGGTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: IDSTEYGLQASKPAL*RQISKVHLTNQVSA
Trigger: AGCGGAGACCTGGTTTGTGAGGTGGACCTTGGAGATCTGTCTCCAGAGGGCAGGTTTACTGGCCTGGAGTCCATATTCCGTGCTGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp ATGAGCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGCATGTAAGCCACAGCTaGGCCAACTGTGTATCTGGC +
Preference number: 5 (lower is better)
Translates to: MSHRRDSEERVQVSLLFLHVSHS*ANCVSG
Trigger: GCCAGATACACAGTTGGCCAAGCTGTGGCTTACATG...CAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCGTGGCTCATGGCTGCTaGATACTTAGAAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVVAHGC*ILRKVM
Trigger: CATTACCTTTCTAAGTATCAAGCAGCCATGAGCCAC...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCCATGTAAGCCACAGCTaGGCCAACTGTGTATCTGGC +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSHVSHS*ANCVSG
Trigger: GCCAGATACACAGTTGGCCAAGCTGTGGCTTACATG...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGGTGGCTCATGGCTGCTaGATACTTAGAAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGVAHGC*ILRKVM
Trigger: CATTACCTTTCTAAGTATCAAGCAGCCATGAGCCAC...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TCAATCAGAACGGGCCCATGGGGTTTCAGCGCAACGGTGACAGCGGCAGCAGTCCCGAAACCTAAGACTTaGAAAAATAATCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SIRTGPWGFSATVTAAAVPKPKT*KNNLVG
Trigger: GCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGG...GACTGCTGCCGCTGTCACCGTTGCGCTGAAACCCCATGGGCCCGTTCTGATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp CAGGCTCCTCCCAGCTGTAAGTTTCTGCTGGCAACCATGGACCTCCAGGGTTTCAGCAGTAGGATTTCCTaGCTCCTCAGATGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: QAPPSCKFLLATMDLQGFSSRIS*LLRWKE
Trigger: TTCCTTCCATCTGAGGAGCAAGGAAATCCTACTGCT...GAAACCCTGGAGGTCCATGGTTGCCAGCAGAAACTTACAGCTGGGAGGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACAGCAACTGGGGCATGTaGCGGTGGCTTATGCCTGTA +
Preference number: 5 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYSNWGM*RWLMPV
Trigger: TACAGGCATAAGCCACCGCAACATGCCCCAGTTGCT...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS GCA 90 bp TGCAATGCTGGCAGGCACAACTGTGTACTCAGCAAAAGAACCAGGTaGCATGTAAGCCACAGCTTGGCCAACTGTGTATCTGGCACTAGC +
Preference number: 5 (lower is better)
Translates to: CNAGRHNCVLSKRTR*HVSHSLANCVSGTS
Trigger: GCTAGTGCCAGATACACAGTTGGCCAAGCTGTGGCTTACATGGCACCTGGTTCTTTTGCTGAGTACACAGTTGTGCCTGCCAGCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CCA 90 bp CAGGAAGAAGCCCTGTACGCTGGCAGATTTCTTGAGCAGTTTGGCTaGCAATGTTCCTGCTTTCACAGGCGAAAGGCCAGTAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QEEALYAGRFLEQFG*QCSCFHRRKASRSL
Trigger: CAAACTCCTACTGGCCTTTCGCCTGTGAAAGCAGGAACATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGTACAGGGCTTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTACGGCCTCGCGGAAGTaGGGGCTCAGCCGGGTCACC +
Preference number: 5 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSTASRK*GLSRVT
Trigger: GGTGACCCGGCTGAGCCCCAACTTCCGCGAGGCCGT...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp AGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCTCCTGGGCAATTACATGGCACTTaGCCTTCTTTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SMLLLRPCRVPRQRFPPGQLHGT*PSLKAA
Trigger: TGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTG...CCCAGGAGGGAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCACGCTGGCAGATTTCTaGAGCAGTTTGGCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSTLADF*SSLAGN
Trigger: ATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGATCACTGGGACTCCTaGGTTTCTCAAAGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSDHWDS*VSQRGK
Trigger: CTTGCCTCTTTGAGAAACCAAGGAGTCCCAGTGATC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS TCA 90 bp TTCATCAGAAGAGCAGGTTCCAATTACATGGCACTTTGCCTTCTTTaGAAGCTGCATGGCAAACTGGCCCGTTCCCCCAGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FIRRAGSNYMALCLL*KLHGKLARSPSCCC
Trigger: ACAGCAGCAGCTGGGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS GCA 90 bp CTGTACGCTGGCAGATTTCTTGAGCAGTTTGGCTGGCAATGTTCCTaGTTTCACAGGCGAAAGGCCAGTAGGAGTTTGGTAGCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LYAGRFLEQFGWQCS*FHRRKASRSLVARD
Trigger: ATCTCTGGCTACCAAACTCCTACTGGCCTTTCGCCTGTGAAAGCAGGAACATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATCTCACTTGAACCAGGGAGGTaGAGGTTGCAATCAACCATG +
Preference number: 5 (lower is better)
Translates to: CGQWVNVGHQAIVPRSISLEPGR*RLQSTM
Trigger: CATGGTTGATTGCAACCTCAACCTCCCTGGTTCAAG...TGAGATGCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS GCA 90 bp AACCAGGTCTCCGCTCACACACATCTCGAGCAAGTGGCTCATGGCTaGTTGATACTTAGAAAGGTAATGGTTCAGGAAGAAGCCCTGTAC +
Preference number: 5 (lower is better)
Translates to: NQVSAHTHLEQVAHG*LILRKVMVQEEALY
Trigger: GTACAGGGCTTCTTCCTGAACCATTACCTTTCTAAGTATCAAGCAGCCATGAGCCACTTGCTCGAGATGTGTGTGAGCGGAGACCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp ACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGGTCTGGCTTTTGCTACACTaGTCACTCATGAACTGCTTA +
Preference number: 5 (lower is better)
Translates to: TGVTQKRGCRFRCFSCVVWLLLH*SLMNCL
Trigger: TAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCA...GACCACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCATATATGGCTGGCTTTaGCTACACTTGTCACTCATG +
Preference number: 5 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFIYGWL*LHLSLM
Trigger: CATGAGTGACAAGTGTAGCAAAAGCCAGCCATATAT...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACAGCAGTAGGATTTCCTaGCTCCTCAGATGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYSSRIS*LLRWKE
Trigger: TTCCTTCCATCTGAGGAGCAAGGAAATCCTACTGCT...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCGGCATGATCCATAATTaGGCAGCTATTTACCGTGAC +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSGMIHN*AAIYRD
Trigger: GTCACGGTAAATAGCTGCCAAATTATGGATCATGCC...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp GCCACAGGCGTGACTCAGAAGAGAGGGTGCAGGTTTCGCTGCTTTTCCTGTGTGACCACACCAACTGTATaGATGATAAACCAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: ATGVTQKRGCRFRCFSCVTTPTV*MINQSD
Trigger: GTCACTTTGGTTTATCATCAATACAGTTGGTGTGGT...CACACAGGAAAAGCAGCGAAACCTGCACCCTCTCTTCTGAGTCACGCCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACGGCATGATCCATAATTaGGCAGCTATTTACCGTGAC +
Preference number: 5 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYGMIHN*AAIYRD
Trigger: GTCACGGTAAATAGCTGCCAAATTATGGATCATGCC...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp GAGCAGTGTAGCATGCTGTTACTAAGGCCTTGCCGTGTGCCTAGACAGCGCTTCCCAACATTCCATAGTTaGTTCATGGTAACAGCAGTA +
Preference number: 5 (lower is better)
Translates to: EQCSMLLLRPCRVPRQRFPTFHS*FMVTAV
Trigger: TACTGCTGTTACCATGAACAAACTATGGAATGTTGG...GAAGCGCTGTCTAGGCACACGGCAAGGCCTTAGTAACAGCATGCTACACTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGGAAGGATTCGCGCATTaGGAGACCCTCCTTGTACCC +
Preference number: 5 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWEGFAH*ETLLVP
Trigger: GGGTACAAGGAGGGTCTCCAAATGCGCGAATCCTTC...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATGTGCCTTATCAGGTaGATGGTAGATAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSMCLIR*MVDKSH
Trigger: ATGGCTTTTATCTACCATCAACCTGATAAGGCACAT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp ACCGTGACATTTCCCTTCAGTGCAGCCATAACATTCAGTGAAGCCATTATTTGGAGAGCCCCTTTAGTCTaGCTGCTGTGTCACACTAGC +
Preference number: 5 (lower is better)
Translates to: TVTFPFSAAITFSEAIIWRAPLV*LLCHTS
Trigger: GCTAGTGTGACACAGCAGCAAGACTAAAGGGGCTCT...CCAAATAATGGCTTCACTGAATGTTATGGCTGCACTGAAGGGAAATGTCACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp TTCCTGTGTGGTCAGTGGGTCAATGTGGGACATCAGGCTATAGTGCCAAGGAGCATACATGAAGACGTATaGGTTTTCTCCAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: FLCGQWVNVGHQAIVPRSIHEDV*VFSKLC
Trigger: GCACAGTTTGGAGAAAACCAATACGTCTTCATGTAT...GCTCCTTGGCACTATAGCCTGATGTCCCACATTGACCCACTGACCACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp CCAGTAACCCTTTGCTATAATGAGGACACAAAGAGCCTCGCATCAGGCCGCTACTGTGCTGGATTAGAGTaGAACACACTTTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: PVTLCYNEDTKSLASGRYCAGLE*NTLSWS
Trigger: TGACCATGAAAGTGTGTTCAACTCTAATCCAGCACA...GTAGCGGCCTGATGCGAGGCTCTTTGTGTCCTCATTATAGCAAAGGGTTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 90 bp TTCAGAAAAGCAGACTTTTCATCAGAAGAGCAGGTTCCAATTACATaGCACTTTGCCTTCTTTGAAAGCTGCATGGCAAACTGGCCCGTT +
Preference number: 5 (lower is better)
Translates to: FRKADFSSEEQVPIT*HFAFFESCMANWPV
Trigger: AACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAAAAGTCTGCTTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS-3UTR CAA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCTGGCTTTTGCTACACTaGTCACTCATGAACTGCTTA +
Preference number: 5 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFWLLLH*SLMNCL
Trigger: TAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCA...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp TTAGATACACCGAAACCTAAGACTTTGAAAAATAATCTGGTGGGCTTCACCTTCCCGAAACCTAAGACTTaGAAAAATAATCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LDTPKPKTLKNNLVGFTFPKPKT*KNNLVG
Trigger: GCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGG...GAAGGTGAAGCCCACCAGATTATTTTTCAAAGTCTTAGGTTTCGGTGTATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp AGCAATTTAGTTGGTAATGTCCTTACTCCCCAAGTCTTTACAAAGGGAGAAAGTTCAAATCAGGCCGTTTaGCATCCAGATTGTATTCAG +
Preference number: 5 (lower is better)
Translates to: SNLVGNVLTPQVFTKGESSNQAV*HPDCIQ
Trigger: CTGAATACAATCTGGATGCAAAACGGCCTGATTTGA...ACTTTCTCCCTTTGTAAAGACTTGGGGAGTAAGGACATTACCAACTAAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATACATAACAAAGGCCAATaGCTGTTCTTCAAACCCCTA +
Preference number: 5 (lower is better)
Translates to: NIWLAFATLVTHELLMSIHNKGQ*LFFKPL
Trigger: TAGGGGTTTGAAGAACAGCAATTGGCCTTTGTTATG...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp TTGTTGTGCATGCATGCTAGCAGCTACATTAGGTACCTGAAAATGAGTAAATCTATGTGCCTTATCAGGTaGATGGTAGATAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LLCMHASSYIRYLKMSKSMCLIR*MVDKSH
Trigger: ATGGCTTTTATCTACCATCAACCTGATAAGGCACAT...AGATTTACTCATTTTCAGGTACCTAATGTAGCTGCTAGCATGCATGCACAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp AATATATGGCTGGCTTTTGCTACACTTGTCACTCATGAACTGCTTATGAGCATAAGTAAGACCTACTATTaGATAGCAAACAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: NIWLAFATLVTHELLMSISKTYY*IANRVT
Trigger: AGTCACCCTGTTTGCTATCAAATAGTAGGTCTTACT...TATGCTCATAAGCAGTTCATGAGTGACAAGTGTAGCAAAAGCCAGCCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS-3UTR CAA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCATAACAAAATCAAATTaGGGAGGGAATTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFITKSN*GGNSPK
Trigger: TTTGGGGGAATTCCCTCCCAAATTTGATTTTGTTAT...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS-3UTR CAA 90 bp AGCCATTACGTGCTACTTCTTCAAAACACATCTGTGTTCACGGAATCATTTTTCAAACAAACCATCCATTaGATCATTCTAAGACCCTGT +
Preference number: 5 (lower is better)
Translates to: SHYVLLLQNTSVFTESFFKQTIH*IILRPC
Trigger: ACAGGGTCTTAGAATGATCAAATGGATGGTTTGTTT...GAAAAATGATTCCGTGAACACAGATGTGTTTTGAAGAAGTAGCACGTAATGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp AGTCCAGGAAGTGGCGGGCGTACGACATGTCCACGATaGCCCGGGCCCCGGTGGGCACCAGCCGCAGCATGG +
Preference number: 6 (lower is better)
Translates to: SPGSGGRTTCPR*PGPRWAPAAAW
Trigger: CCATGCTGCGGCTGGTGCCCACCGGGGCCCGGGCCATCGTGGACATGTCGTACGCCCGCCACTTCCTGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp AGCGCAGCAGGCGCAAAGCGAATGCGGGGCTCGGGATaGGGAGCAGGGGCGGAAGGGCCAGGGAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: SAAGAKRMRGSG*GAGAEGPGSHR
Trigger: TCTGTGGCTCCCTGGCCCTTCCGCCCCTGCTCCCCATCCCGAGCCCCGCATTCGCTTTGCGCCTGCTGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537114.2
CDS CAA 90 bp AGCGGCACCGGGCAGTCCCGGCTCAGGGTGACGGCCTCGCGGAAGTaGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: SGTGQSRLRVTASRK*GLSRVTTSFCMAWG
Trigger: TCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCGCGAGGCCGTCACCCTGAGCCGGGACTGCCCGGTGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp GCTTGGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTaGCGGGCGTACGACATGTCCACGATGGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: AWGMAEPWKSRK*RAYDMSTMARA
Trigger: GGCCCGGGCCATCGTGGACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp GCCGGGTCACCACCAGCTTCTGCATGGCTTGGGGAATaGCGGAGCCCTGGAAGTCCAGGAAGTGGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: AGSPPASAWLGE*RSPGSPGSGGR
Trigger: ACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CAA 90 bp GCGGAAGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGCTaGGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTGGCGGGCGTA +
Preference number: 6 (lower is better)
Translates to: AEVGAQPGHHQLLHG*GNGGALEVQEVAGV
Trigger: TACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS GCA 72 bp CGGAAGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTaGATGGCTTGGGGAATGGCGGAGCCCTGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: RKLGLSRVTTSF*MAWGMAEPWKS
Trigger: GGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACTTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp GGGCTCAGCCGGGTCACCACCAGCTTCTGCATGGCTTaGGGAATGGCGGAGCCCTGGAAGTCCAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: GLSRVTTSFCMA*GMAEPWKSRKW
Trigger: CCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp AGTTGGGGCTCAGCCGGGTCACCACCAGCTTCTGCATaGCTTGGGGAATGGCGGAGCCCTGGAAGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SWGSAGSPPASA*LGEWRSPGSPG
Trigger: TCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGTGGTGACCCGGCTGAGCCCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS CCA 72 bp ACCAGCTTCTGCATGGCTTGGGGAATGGCGGAGCCCTaGAAGTCCAGGAAGTGGCGGGCGTACGACATGTCC +
Preference number: 6 (lower is better)
Translates to: TSFCMAWGMAEP*KSRKWRAYDMS
Trigger: GGACATGTCGTACGCCCGCCACTTCCTGGACTTCCAGGGCTCCGCCATTCCCCAAGCCATGCAGAAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322342.4
CDS GCA 72 bp TTCCGACAGTCCTCCGAGCTCTTTCAGGCTGATGTATaGGGTGGTGCCACTTACCAGCAGGGTAAGATACTC +
Preference number: 6 (lower is better)
Translates to: FRQSSELFQADV*GGATYQQGKIL
Trigger: GAGTATCTTACCCTGCTGGTAAGTGGCACCACCGCATACATCAGCCTGAAAGAGCTCGGAGGACTGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CCA 72 bp GCCCTGTACGCTGGCAGATTTCTTGAGCAGTTTGGCTaGCAATGTTCCTGCTTTCACAGGCGAAAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: ALYAGRFLEQFG*QCSCFHRRKAS
Trigger: ACTGGCCTTTCGCCTGTGAAAGCAGGAACATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGTACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS CCA 72 bp ACGGAATATGGACTCCAGGCCAGTAAACCTGCCCTCTaGAGACAGATCTCCAAGGTCCACCTCACAAACCAG +
Preference number: 6 (lower is better)
Translates to: TEYGLQASKPAL*RQISKVHLTNQ
Trigger: CTGGTTTGTGAGGTGGACCTTGGAGATCTGTCTCCAGAGGGCAGGTTTACTGGCCTGGAGTCCATATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS TCA 72 bp AGAGCAGGTTCCAATTACATGGCACTTTGCCTTCTTTaGAAGCTGCATGGCAAACTGGCCCGTTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RAGSNYMALCLL*KLHGKLARSPS
Trigger: GCTGGGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CCA 72 bp ACTCGGGTTTCACTGAGGGCACTGGAGTTGCAATGCTaGCAGGCACAACTGTGTACTCAGCAAAAGAACCAG +
Preference number: 6 (lower is better)
Translates to: TRVSLRALELQC*QAQLCTQQKNQ
Trigger: CTGGTTCTTTTGCTGAGTACACAGTTGTGCCTGCCAGCATTGCAACTCCAGTGCCCTCAGTGAAACCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CCA 72 bp CAATTACATGGCACTTTGCCTTCTTTGAAAGCTGCATaGCAAACTGGCCCGTTCCCCCAGCTGCTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: QLHGTLPSLKAA*QTGPFPQLLLS
Trigger: TGACAGCAGCAGCTGGGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CAA 90 bp CAGGTCTCCGCTCACACACATCTCGAGCAAGTGGCTCATGGCTGCTaGATACTTAGAAAGGTAATGGTTCAGGAAGAAGCCCTGTACGCT +
Preference number: 6 (lower is better)
Translates to: QVSAHTHLEQVAHGC*ILRKVMVQEEALYA
Trigger: AGCGTACAGGGCTTCTTCCTGAACCATTACCTTTCTAAGTATCAAGCAGCCATGAGCCACTTGCTCGAGATGTGTGTGAGCGGAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS GCA 72 bp GATACTCGGGTTTCACTGAGGGCACTGGAGTTGCAATaGTGGCAGGCACAACTGTGTACTCAGCAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: DTRVSLRALELQ*WQAQLCTQQKN
Trigger: GTTCTTTTGCTGAGTACACAGTTGTGCCTGCCAGCATTGCAACTCCAGTGCCCTCAGTGAAACCCGAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CAA 90 bp AAGCAGACTTTTCATCAGAAGAGCAGGTTCCAATTACATGGCACTTaGCCTTCTTTGAAAGCTGCATGGCAAACTGGCCCGTTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: KQTFHQKSRFQLHGT*PSLKAAWQTGPFPQ
Trigger: CTGGGGGAACGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAAAAGTCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CAA 72 bp GCTCACACACATCTCGAGCAAGTGGCTCATGGCTGCTaGATACTTAGAAAGGTAATGGTTCAGGAAGAAGCC +
Preference number: 6 (lower is better)
Translates to: AHTHLEQVAHGC*ILRKVMVQEEA
Trigger: GGCTTCTTCCTGAACCATTACCTTTCTAAGTATCAAGCAGCCATGAGCCACTTGCTCGAGATGTGTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322342.4
ENST00000537114.2
CDS CAA 72 bp TTTCATCAGAAGAGCAGGTTCCAATTACATGGCACTTaGCCTTCTTTGAAAGCTGCATGGCAAACTGGCCCG +
Preference number: 6 (lower is better)
Translates to: FHQKSRFQLHGT*PSLKAAWQTGP
Trigger: CGGGCCAGTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1
CDS CCA 72 bp GCAGACTTTTCATCAGAAGAGCAGGTTCCAATTACATaGCACTTTGCCTTCTTTGAAAGCTGCATGGCAAAC +
Preference number: 6 (lower is better)
Translates to: ADFSSEEQVPIT*HFAFFESCMAN
Trigger: GTTTGCCATGCAGCTTTCAAAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAAAAGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322342.4
ENST00000537114.2
ENST00000581620.1
ENST00000582437.1