RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000230797

Ensembl transcript IDs: ENST00000429584.3

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTTGACATTACAGGCCTaGGCCCCTGCACCTGACACT +
Preference number: 2 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSLTLQA*APAPDT
Trigger: AGTGTCAGGTGCAGGGGCTCAGGCCTGTAATGTCAA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
3UTR-3UTR GCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTCGTGGGGCTGTCTGTaGATTGTAGGATGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSSWGCL*IVGCLV
Trigger: CACTAAACATCCTACAATGCACAGACAGCCCCACGA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
3UTR-3UTR CCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTCCCTACCGCAGTCCTaGAAGATAATTCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSSLPQS*KIIPKS
Trigger: AGACTTGGGAATTATCTTCCAGGACTGCGGTAGGGA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
3UTR-3UTR TCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCCAACATACAAAGCTTTaGGAGGCATATTTATTCCCT +
Preference number: 2 (lower is better)
Translates to: VGCLVAFLISLHSPDASSQHTKL*EAYLFP
Trigger: AGGGAATAAATATGCCTCTCAAAGCTTTGTATGTTG...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGTGCCCGCGTACGTTTaGCACCCTGCGACCCCGCCC +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSVPAYV*HPATPP
Trigger: GGGCGGGGTCGCAGGGTGGCAAACGTACGCGGGCAC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGCCGGAAGGCGCAGGTaGTTCTGGGATAGCCAGACG +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSAGRRR*FWDSQT
Trigger: CGTCTGGCTATCCCAGAAGCACCTGCGCCTTCCGGC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGTACGTTTGCCACCCTaGGACCCCGCCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSVRLPP*DPAQLL
Trigger: CAACAGCTGGGCGGGGTCGCAGGGTGGCAAACGTAC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCATGCGCCTAGGCAACTaGCGCGTCTGTCGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSMRLGN*RVCRPQ
Trigger: TTGGGGCCGACAGACGCGCCAGTTGCCTAGGCGCAT...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGAGGCGCAGGTGCTTCTaGGATAGCCAGACGCATGCG +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSRRRCF*DSQTHA
Trigger: CGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCCT...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR TCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGAGAAAGGCGCGAGACTaGGGAAAGCACGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSRKARD*GKHEPE
Trigger: TTCCGGCTCGTGCTTTCCTCAGTCTCGCGCCTTTCT...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGGCCCCAAAAGCACGTaGACGTGCCCGCGTACGTTT +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSGPKST*TCPRTF
Trigger: AAACGTACGCGGGCACGTGCACGTGCTTTTGGGGCC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCAAAAGCACGTGCACGTaGCCGCGTACGTTTGCCACC +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSKSTCT*PRTFAT
Trigger: GGTGGCAAACGTACGCGGGCACGTGCACGTGCTTTT...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR TCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGTTGGAGGCCATGGCTaGGAGTTAGTTAGGTTAGCG +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSVGGHG*ELVRLA
Trigger: CGCTAACCTAACTAACTCTCAGCCATGGCCTCCAAC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR TCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTCTCCAGGTCTTGTGTaGTGGAGAAATCTTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSSPGLV*WRNLRW
Trigger: CCAACGAAGATTTCTCCATCACACAAGACCTGGAGA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR TCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGATAATTCCCAAGTCTaGGAGGGGTCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSDNSQV*EGSSPF
Trigger: AAAAGGAGAAGACCCCTCTCAGACTTGGGAATTATC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR GCA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCTCGTGGGGCTGTCTGTaGATTGTAGGATGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: VGCLVAFLISLHSPDASSSWGCL*IVGCLV
Trigger: CACTAAACATCCTACAATGCACAGACAGCCCCACGA...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTTCACGGGTTGTTTTTaGTCTTCACATGCGTTAATA +
Preference number: 4 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSFTGCF*SSHALI
Trigger: TATTAACGCATGTGAAGACCAAAAACAACCCGTGAA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CCA 90 bp GGCGCAGGTGCTTCTGGGATAGCCAGACGCATGCGCCTAGGCAACTaGCGCGTCTGTCGGCCCCAAAAGCACGTGCACGTGCCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: GAGASGIARRMRLGN*RVCRPQKHVHVPAY
Trigger: GTACGCGGGCACGTGCACGTGCTTTTGGGGCCGACAGACGCGCCAGTTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp TTGCTTCTGCTCCCACTTCCTCGTGCCCAGGCTGGAGCTGCTGCCTaGCGGGTTGGCCTCAGTGCTGGTGGCACTCTTGCCGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: LLLLPLPRAQAGAAA*RVGLSAGGTLAAGL
Trigger: AAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGCAGGCAGCAGCTCCAGCCTGGGCACGAGGAAGTGGGAGCAGAAGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CCA 90 bp GGCGCGAGACTGAGGAAAGCACGAGCCGGAAGGCGCAGGTGCTTCTaGGATAGCCAGACGCATGCGCCTAGGCAACTGGCGCGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: GARLRKARAGRRRCF*DSQTHAPRQLARLS
Trigger: CGACAGACGCGCCAGTTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCCTTCCGGCTCGTGCTTTCCTCAGTCTCGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp TCCTCGTGCCCAGGCTGGAGCTGCTGCCTGCCGGGTTGGCCTCAGTaGTGGTGGCACTCTTGCCGCTGGGCTTTTTGCTGGGCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: SSCPGWSCCLPGWPQ*WWHSCRWAFCWAFC
Trigger: GCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGCAGGCAGCAGCTCCAGCCTGGGCACGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp GAGAAAGGCGCGAGACTGAGGAAAGCACGAGCCGGAAGGCGCAGGTaGTTCTGGGATAGCCAGACGCATGCGCCTAGGCAACTGGCGCGT +
Preference number: 5 (lower is better)
Translates to: EKGARLRKARAGRRR*FWDSQTHAPRQLAR
Trigger: ACGCGCCAGTTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCCTTCCGGCTCGTGCTTTCCTCAGTCTCGCGCCTTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp TGGAGCTGCTGCCTGCCGGGTTGGCCTCAGTGCTGGTGGCACTCTTaGCGCTGGGCTTTTTGCTGGGCTTTTTGCTGCGGCTCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: WSCCLPGWPQCWWHS*RWAFCWAFCCGSGL
Trigger: CAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGCAGGCAGCAGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp GTTGATGCCGCCGAGGCCGACAGAGAGGCCAGGGTCATCTGGAAGTaGTCGTCTTCAATGCTATCCGGGAGGGCCAACTGGTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VDAAEADREARVIWK*SSSMLSGRANWSSK
Trigger: CTTGGAGGACCAGTTGGCCCTCCCGGATAGCATTGAAGACGAGCACTTCCAGATGACCCTGGCCTCTCTGTCGGCCTCGGCGGCATCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCCGTGCCCGCGTACGTTaGCCACCCTGCGACCCCGCC +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSRARVR*PPCDPA
Trigger: GGCGGGGTCGCAGGGTGGCAAACGTACGCGGGCACG...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp CAGTGCTGGTGGCACTCTTGCCGCTGGGCTTTTTGCTGGGCTTTTTaGTGCGGCTCTGGGTTGATGTTGATGTTGATGCCGCCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: QCWWHSCRWAFCWAF*CGSGLMLMLMPPRP
Trigger: CGGCCTCGGCGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp AGGCCGACAGAGAGGCCAGGGTCATCTGGAAGTGCTCGTCTTCAATaGTATCCGGGAGGGCCAACTGGTCCTCCAAGTCGTTGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: RPTERPGSSGSARLQ*YPGGPTGPPSRCLA
Trigger: AGCTAGGCAACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGCATTGAAGACGAGCACTTCCAGATGACCCTGGCCTCTCTGTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp CCGGGTTGGCCTCAGTGCTGGTGGCACTCTTGCCGCTGGGCTTTTTaGTGGGCTTTTTGCTGCGGCTCTGGGTTGATGTTGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGWPQCWWHSCRWAF*WAFCCGSGLMLMLM
Trigger: CATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp CGTCTTCAATGCTATCCGGGAGGGCCAACTGGTCCTCCAAGTCGTTaGCTAGCTGGTTGTCTGAGTCGCAATAGCCCACCACTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RLQCYPGGPTGPPSR*LAGCLSRNSPPLPL
Trigger: AAGAGGAAGTGGTGGGCTATTGCGACTCAGACAACCAGCTAGGCAACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGCATTGAAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGGAAGGGGCTCCACATaGATGTCGTGGAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSGRGST*MSWSST
Trigger: TGTGGAGCTCCACGACATCAATGTGGAGCCCCTTCC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGTGCTGGTGGCACTCTaGCCGCTGGGCTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSVLVAL*PLGFLL
Trigger: CAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCAC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp GCAACACCATCAATGGCGGATGGTTGTGGCCACCGTAGATCCAATTaGCATCCACATCCTCGTACTGGACGCTTTCCGTCGGAATGTCCT +
Preference number: 5 (lower is better)
Translates to: ATPSMADGCGHRRSN*HPHPRTGRFPSECP
Trigger: AGGACATTCCGACGGAAAGCGTCCAGTACGAGGATGTGGATGGCAATTGGATCTACGGTGGCCACAACCATCCGCCATTGATGGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTGGTCCTCCAAGTCGTaGCCTAGCTGGTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSWSSKS*PSWLSE
Trigger: CTCAGACAACCAGCTAGGCAACGACTTGGAGGACCA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGGGTTGATGTTGATGTaGATGCCGCCGAGGCCGACA +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSGLMLM*MPPRPT
Trigger: TGTCGGCCTCGGCGGCATCAACATCAACATCAACCC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGGCTCTGGGTTGATGTaGATGTTGATGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSGSGLM*MLMPPR
Trigger: CCTCGGCGGCATCAACATCAACATCAACCCAGAGCC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGACCCCGCCCAGCTGTaGTTTTTCCACTTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSDPAQL*FFHFRK
Trigger: CTTACGAAAGTGGAAAAACAACAGCTGGGCGGGGTC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCTGCTGCGGCTCTGGGTaGATGTTGATGTTGATGCCG +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSCCGSG*MLMLMP
Trigger: CGGCATCAACATCAACATCAACCCAGAGCCGCAGCA...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTCACCCTCCAGCGTTTaGACCTGCATTTGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSSPSSV*TCICFC
Trigger: GCAGAAGCAAATGCAGGTCAAAACGCTGGAGGGTGA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGACTGCCCCTTGGTCATaGTTATCGTTAGGGGACCAC +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSTAPWS*LSLGDH
Trigger: GTGGTCCCCTAACGATAACAATGACCAAGGGGCAGT...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGAGCAAGGGACTGTTTaGGGAGGTTCTCCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSEQGTV*GGSPLD
Trigger: GTCCAAAGGAGAACCTCCCAAAACAGTCCCTTGCTC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGATGGAGAAATCTTCGTaGGAGGCCATGGCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSMEKSS*EAMAES
Trigger: ACTCTCAGCCATGGCCTCCAACGAAGATTTCTCCAT...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTTCACCCACTGCCCCTaGGTCATTGTTATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSFTHCP*VIVIVR
Trigger: CCTAACGATAACAATGACCAAGGGGCAGTGGGTGAA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGGGTTTTCAGGTTGGTaGACTGAGCGAACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSGFSGW*TERTSC
Trigger: ACAGGAAGTTCGCTCAGTCAACCAACCTGAAAACCC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGCCGAGTTATGCCATGTaGCCCAGGCTGATGTTCAAT +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSPSYAM*PRLMFN
Trigger: ATTGAACATCAGCCTGGGCAACATGGCATAACTCGG...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS TCA 90 bp CTCCAGGTCTTGTGTGATGGAGAAATCTTCGTTGGAGGCCATGGCTaGGAGTTAGTTAGGTTAGCGGCAACGGGAAGACCGTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LQVLCDGEIFVGGHG*ELVRLAATGRPWEK
Trigger: TTTTTCCCACGGTCTTCCCGTTGCCGCTAACCTAACTAACTCTCAGCCATGGCCTCCAACGAAGATTTCTCCATCACACAAGACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 90 bp CATAGGAAGGGGCTCCACATTGATGTCGTGGAGCTCCACAATATCTaGCGGGATCTCCAGGTCTTGTGTGATGGAGAAATCTTCGTTGGA +
Preference number: 5 (lower is better)
Translates to: HRKGLHIDVVELHNI*RDLQVLCDGEIFVG
Trigger: TCCAACGAAGATTTCTCCATCACACAAGACCTGGAGATCCCGGCAGATATTGTGGAGCTCCACGACATCAATGTGGAGCCCCTTCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCCGGGATCTCCAGGTCTaGTGTGATGGAGAAATCTTC +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSRDLQV*CDGEIF
Trigger: GAAGATTTCTCCATCACACAAGACCTGGAGATCCCG...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCGCCCACCACTTCCTCTaGTGTCTGCAACATAAGCAT +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSAHHFL*CLQHKH
Trigger: ATGCTTATGTTGCAGACACAAGAGGAAGTGGTGGGC...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGGGTGTCGTCTCAGCTTaGAGCTCTCAAGAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSGVVSA*SSQEKL
Trigger: AAGCTTTTCTTGAGAGCTCAAAGCTGAGACGACACC...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTGATGTTCAATTCCTGAGCTCAAACGATCCACCCACCTCGTCTCCTTTTCACGGGTaGTTTTTGGTCTTCACATGC +
Preference number: 5 (lower is better)
Translates to: HVAQADVQFLSSNDPPTSSPFHG*FLVFTC
Trigger: GCATGTGAAGACCAAAAACAACCCGTGAAAAGGAGA...CGAGGTGGGTGGATCGTTTGAGCTCAGGAATTGAACATCAGCCTGGGCAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCTCTCCTTTGGACCTTTaGGGCTTCACTTTAGTAAAT +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSSPLDL*GFTLVN
Trigger: ATTTACTAAAGTGAAGCCCAAAAGGTCCAAAGGAGA...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS-3UTR CAA 90 bp GTAGGATGTTTAGTGGCATTCCTGATCTCCCTCCACTCACCAGATGCCAGTAGCTTTCACGGGTTGTTTTaGGTCTTCACATGCGTTAAT +
Preference number: 5 (lower is better)
Translates to: VGCLVAFLISLHSPDASSFHGLF*VFTCVN
Trigger: ATTAACGCATGTGAAGACCAAAAACAACCCGTGAAA...GCTACTGGCATCTGGTGAGTGGAGGGAGATCAGGAATGCCACTAAACATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CCA 72 bp GCTTCTGGGATAGCCAGACGCATGCGCCTAGGCAACTaGCGCGTCTGTCGGCCCCAAAAGCACGTGCACGTG +
Preference number: 6 (lower is better)
Translates to: ASGIARRMRLGN*RVCRPQKHVHV
Trigger: CACGTGCACGTGCTTTTGGGGCCGACAGACGCGCCAGTTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CCA 72 bp CTGAGGAAAGCACGAGCCGGAAGGCGCAGGTGCTTCTaGGATAGCCAGACGCATGCGCCTAGGCAACTGGCG +
Preference number: 6 (lower is better)
Translates to: LRKARAGRRRCF*DSQTHAPRQLA
Trigger: CGCCAGTTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCCTTCCGGCTCGTGCTTTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp CTGGAGCTGCTGCCTGCCGGGTTGGCCTCAGTGCTGGTGGCACTCTaGCCGCTGGGCTTTTTGCTGGGCTTTTTGCTGCGGCTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: LELLPAGLASVLVAL*PLGFLLGFLLRLWV
Trigger: AACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGCAGGCAGCAGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp GCGAGACTGAGGAAAGCACGAGCCGGAAGGCGCAGGTaGTTCTGGGATAGCCAGACGCATGCGCCTAGGCAA +
Preference number: 6 (lower is better)
Translates to: ARLRKARAGRRR*FWDSQTHAPRQ
Trigger: TTGCCTAGGCGCATGCGTCTGGCTATCCCAGAAGCACCTGCGCCTTCCGGCTCGTGCTTTCCTCAGTCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp GCCGAGGCCGACAGAGAGGCCAGGGTCATCTGGAAGTaGTCGTCTTCAATGCTATCCGGGAGGGCCAACTGG +
Preference number: 6 (lower is better)
Translates to: AEADREARVIWK*SSSMLSGRANW
Trigger: CCAGTTGGCCCTCCCGGATAGCATTGAAGACGAGCACTTCCAGATGACCCTGGCCTCTCTGTCGGCCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp TCTTGCCGCTGGGCTTTTTGCTGGGCTTTTTGCTGCGGCTCTGGGTaGATGTTGATGTTGATGCCGCCGAGGCCGACAGAGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: SCRWAFCWAFCCGSG*MLMLMPPRPTERPG
Trigger: CCCTGGCCTCTCTGTCGGCCTCGGCGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp CGCTGGGCTTTTTGCTGGGCTTTTTGCTGCGGCTCTGGGTTGATGTaGATGTTGATGCCGCCGAGGCCGACAGAGAGGCCAGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: RWAFCWAFCCGSGLM*MLMPPRPTERPGSS
Trigger: AGATGACCCTGGCCTCTCTGTCGGCCTCGGCGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp TCAGTGCTGGTGGCACTCTTGCCGCTGGGCTTTTTGCTGGGCTTTTaGCTGCGGCTCTGGGTTGATGTTGATGTTGATGCCGCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: SVLVALLPLGFLLGF*LRLWVDVDVDAAEA
Trigger: GGCCTCGGCGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp GCCGGGTTGGCCTCAGTGCTGGTGGCACTCTTGCCGCTGGGCTTTTaGCTGGGCTTTTTGCTGCGGCTCTGGGTTGATGTTGATGTTGAT +
Preference number: 6 (lower is better)
Translates to: AGLASVLVALLPLGF*LGFLLRLWVDVDVD
Trigger: ATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS TCA 72 bp GCATTTCCTGGTCGTGGTCGCCATAGCCCGTGTTCGTaGAGAGCGGCTGCAACACCATCAATGGCGGATGGT +
Preference number: 6 (lower is better)
Translates to: AFPGRGRHSPCS*RAAATPSMADG
Trigger: ACCATCCGCCATTGATGGTGTTGCAGCCGCTCTTCACGAACACGGGCTATGGCGACCACGACCAGGAAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp TGCTATCCGGGAGGGCCAACTGGTCCTCCAAGTCGTTaGCTAGCTGGTTGTCTGAGTCGCAATAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: CYPGGPTGPPSR*LAGCLSRNSPP
Trigger: TGGTGGGCTATTGCGACTCAGACAACCAGCTAGGCAACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp GAGAGGCCAGGGTCATCTGGAAGTGCTCGTCTTCAATaGTATCCGGGAGGGCCAACTGGTCCTCCAAGTCGT +
Preference number: 6 (lower is better)
Translates to: ERPGSSGSARLQ*YPGGPTGPPSR
Trigger: ACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGCATTGAAGACGAGCACTTCCAGATGACCCTGGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp CCTCAGTGCTGGTGGCACTCTTGCCGCTGGGCTTTTTaGTGGGCTTTTTGCTGCGGCTCTGGGTTGATGTTG +
Preference number: 6 (lower is better)
Translates to: PQCWWHSCRWAF*WAFCCGSGLML
Trigger: CAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 90 bp TGGACGCTTTCCGTCGGAATGTCCTCCATAGGAAGGGGCTCCACATaGATGTCGTGGAGCTCCACAATATCTGCCGGGATCTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: WTLSVGMSSIGRGST*MSWSSTISAGISRS
Trigger: AGACCTGGAGATCCCGGCAGATATTGTGGAGCTCCACGACATCAATGTGGAGCCCCTTCCTATGGAGGACATTCCGACGGAAAGCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp TCAATGGCGGATGGTTGTGGCCACCGTAGATCCAATTaGCATCCACATCCTCGTACTGGACGCTTTCCGTCG +
Preference number: 6 (lower is better)
Translates to: SMADGCGHRRSN*HPHPRTGRFPS
Trigger: CGACGGAAAGCGTCCAGTACGAGGATGTGGATGGCAATTGGATCTACGGTGGCCACAACCATCCGCCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS GCA 72 bp TGGCACTCTTGCCGCTGGGCTTTTTGCTGGGCTTTTTaGTGCGGCTCTGGGTTGATGTTGATGTTGATGCCG +
Preference number: 6 (lower is better)
Translates to: WHSCRWAFCWAF*CGSGLMLMLMP
Trigger: CGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCCCAGCAAAAAGCCCAGCGGCAAGAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS CAA 72 bp GTGGAGCTCCACAATATCTGCCGGGATCTCCAGGTCTaGTGTGATGGAGAAATCTTCGTTGGAGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: VELHNICRDLQV*CDGEIFVGGHG
Trigger: GCCATGGCCTCCAACGAAGATTTCTCCATCACACAAGACCTGGAGATCCCGGCAGATATTGTGGAGCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS TCA 72 bp GCTCCACAATATCTGCCGGGATCTCCAGGTCTTGTGTaGTGGAGAAATCTTCGTTGGAGGCCATGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: APQYLPGSPGLV*WRNLRWRPWLR
Trigger: TCTCAGCCATGGCCTCCAACGAAGATTTCTCCATCACACAAGACCTGGAGATCCCGGCAGATATTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3
CDS TCA 72 bp TTGTGTGATGGAGAAATCTTCGTTGGAGGCCATGGCTaGGAGTTAGTTAGGTTAGCGGCAACGGGAAGACCG +
Preference number: 6 (lower is better)
Translates to: LCDGEIFVGGHG*ELVRLAATGRP
Trigger: CGGTCTTCCCGTTGCCGCTAACCTAACTAACTCTCAGCCATGGCCTCCAACGAAGATTTCTCCATCACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429584.3