Pregenerated sensors for YWHAE (Homo sapiens)
Ensembl gene IDs: ENSG00000108953, ENSG00000274474Ensembl transcript IDs: ENST00000264335.13, ENST00000498643.1, ENST00000572108.1, ENST00000576854.1, ENST00000627231.2, ENST00000628981.1, ENST00000630936.1, ENST00000631243.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTCTGAACAAAAGAGGTTaGGCGAGCGAAGGAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TMLLPGLEDKTHHQLTQCLNKRG*ASEGGE Trigger: CTCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAG...ACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCACTGAACAAAAGAGGTTaGGCGAGCGAAGGAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KYHVAAWSGGQDTPSTDSLNKRG*ASEGGE Trigger: CTCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAG...TGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAACTGAACAAAAGAGGTaGAGCGAGCGAAGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KYHVAAWSGGQDTPSTDSTEQKR*SERRRG Trigger: TCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAGT...TGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCACAACCAGACTACACTGAACAAAAGAGGTaGAGCGAGCGAAGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LEDKTHHQLTQCSSQPDYTEQKR*SERRRG Trigger: TCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAGT...GTAGTCTGGTTGTGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| 3UTR TCA 72 bp | TGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTaGCTCAGTGTTCTTCACAACCAGACTACAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CCLVWRTRHTIN*LSVLHNQTTGN Trigger: ATTGCCTGTAGTCTGGTTGTGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTGGCTCCGGCAGGGTCTaGGCGACGGATGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMLLPGLEDKTHHQLTQCGSGRV*ATDGSG Trigger: TCCGCTTCCATCCGTCGCGCAGACCCTGCCGGAGCC...ACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR CCA 90 bp | AAATACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGGCGCCCGAAGCGGCTaGAACGAGCGCACGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KYHVAAWSGGQDTPSTDSGARSG*NERTRR Trigger: GCGTCTCGTGCGCTCGTTCCAGCCGCTTCGGGCGCC...TGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627231.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCACAACCAGACTACGGCTCCGGCAGGGTCTaGGCGACGGATGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEDKTHHQLTQCSSQPDYGSGRV*ATDGSG Trigger: TCCGCTTCCATCCGTCGCGCAGACCCTGCCGGAGCC...GTAGTCTGGTTGTGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCACTGAACAAAAGAGGTTaGGCGAGCGAAGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPGLEDKTHHQLTQCSSLNKRG*ASEGGE Trigger: CTCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAG...TGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCATGTTGCTGCCTGGTCTaGAGGACAAGACACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLPGLEDKTHHQLTQCSSCCCLV*RTRHTI Trigger: GATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACA...TGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR CCA 90 bp | AAATACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCATACCATGTTGCTGCCTaGTCTGGAGGACAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: KYHVAAWSGGQDTPSTDSYHVAA*SGGQDT Trigger: TGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTA...TGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCACAACCAGACTACAGACACACCATCAACTaGCTCAGTGTTCTTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEDKTHHQLTQCSSQPDYRHTIN*LSVLHN Trigger: GTTGTGAAGAACACTGAGTCAGTTGATGGTGTGTCT...GTAGTCTGGTTGTGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS GCA 90 bp | GGGCATAGAGCCTCCCATCGCCCCGGGAGCTCCCAGGCCATTTCCTaGTTCCCGAACCCAAGCCCCCGGGCCAGGCTCGCAGACGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHRASHRPGSSQAIS*FPNPSPRARLADDA Trigger: GGCATCGTCTGCGAGCCTGGCCCGGGGGCTTGGGTTCGGGAAGCAGGAAATGGCCTGGGAGCTCCCGGGGCGATGGGAGGCTCTATGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 90 bp | TTCCTGCTTCCCGAACCCAAGCCCCCGGGCCAGGCTCGCAGACGATaGCGCCATTTTGTCTCCTGTTCCCGGCCTCTGTGGGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLPEPKPPGQARRR*RHFVSCSRPLWAAA Trigger: TGCCGCCGCCCACAGAGGCCGGGAACAGGAGACAAAATGGCGGCATCGTCTGCGAGCCTGGCCCGGGGGCTTGGGTTCGGGAAGCAGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CCA 90 bp | GAAAGGCGCCCGCGCTACAGCTCCCGGTCTTCGCTCTCTCCCATGTaGCGGGTGCTGCTTCCCCCGTCACCCCACCCAATTGTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERRPRYSSRSSLSPM*RVLLPPSPHPIVLH Trigger: GTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGCTGTAGCGCGGGCGCCTTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 90 bp | CGCGCTACAGCTCCCGGTCTTCGCTCTCTCCCATGTGGCGGGTGCTaGTTCCCCCGTCACCCCACCCAATTGTTCTCCACATCCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RATAPGLRSLPCGGC*FPRHPTQLFSTSQG Trigger: GCCTTGGGATGTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGCTGTAGCGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 90 bp | GCCCGCGCTACAGCTCCCGGTCTTCGCTCTCTCCCATGTGGCGGGTaGTGCTTCCCCCGTCACCCCACCCAATTGTTCTCCACATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ARATAPGLRSLPCGG*CFPRHPTQLFSTSQ Trigger: TTGGGATGTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGCTGTAGCGCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 90 bp | AGGTGCCGGCCTACGGGAAAGAAACCCGATCGCAGCATGGGAGCCTaGCACCGCCCGAAGACGAACTGCAGTGATTCCCACTCACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCRPTGKKPDRSMGA*HRPKTNCSDSHSPL Trigger: GAGGGGTGAGTGGGAATCACTGCAGTTCGTCTTCGGGCGGTGGCAGGCTCCCATGCTGCGATCGGGTTTCTTTCCCGTAGGCCGGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS TCA 90 bp | CACCCAATTGTTCTCCACATCCCAAGGCCGTCCCAGAAGCTCCCATaGGGGTGGCTCGTTCGGAGACAGCACCCGCCATCTCCTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPIVLHIPRPSQKLP*GWLVRRQHPPSPPP Trigger: AGGGGGAGGAGATGGCGGGTGCTGTCTCCGAACGAGCCACCCTCATGGGAGCTTCTGGGACGGCCTTGGGATGTGGAGAACAATTGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CCA 90 bp | TCACTACGAGGTGCCGGCCTACGGGAAAGAAACCCGATCGCAGCATaGGAGCCTGCCACCGCCCGAAGACGAACTGCAGTGATTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLRGAGLRERNPIAA*EPATARRRTAVIPT Trigger: AGTGGGAATCACTGCAGTTCGTCTTCGGGCGGTGGCAGGCTCCCATGCTGCGATCGGGTTTCTTTCCCGTAGGCCGGCACCTCGTAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CCA 90 bp | GGGACGGAGGCTCGGGCTCTACAAAGGCTCGAACTCTCAGAGTCGTaGCCTCCTGGTTCTATCCATCAGAACCCACGGGTGATGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTEARALQRLELSES*PPGSIHQNPRVMEP Trigger: TGGCTCCATCACCCGTGGGTTCTGATGGATAGAACCAGGAGGCCACGACTCTGAGAGTTCGAGCCTTTGTAGAGCCCGAGCCTCCGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498643.1 ENST00000576854.1 ENST00000628981.1 ENST00000631243.1 |
||
| CDS CCA 90 bp | GGCTCGGGCTCTACAAAGGCTCGAACTCTCAGAGTCGTGGCCTCCTaGTTCTATCCATCAGAACCCACGGGTGATGGAGCCAGAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGSTKARTLRVVAS*FYPSEPTGDGARER Trigger: CCTTTCTCTGGCTCCATCACCCGTGGGTTCTGATGGATAGAACCAGGAGGCCACGACTCTGAGAGTTCGAGCCTTTGTAGAGCCCGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498643.1 ENST00000576854.1 ENST00000628981.1 ENST00000631243.1 |
||
| CDS TCA 90 bp | TCTCAGAGTCGTGGCCTCCTGGTTCTATCCATCAGAACCCACGGGTaGTGGAGCCAGAGAAAGGTTACAGGAACTTCGAGATCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSRGLLVLSIRTHG*WSQRKVTGTSRSPV Trigger: AACAGGAGATCTCGAAGTTCCTGTAACCTTTCTCTGGCTCCATCACCCGTGGGTTCTGATGGATAGAACCAGGAGGCCACGACTCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498643.1 ENST00000576854.1 ENST00000628981.1 ENST00000631243.1 |
||
| CDS-3UTR CAA 90 bp | ACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTACTGAACAAAAGAGGTaGAGCGAGCGAAGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TMLLPGLEDKTHHQLTQCTEQKR*SERRRG Trigger: TCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAGT...ACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAGTGTTCTTCAACTGAACAAAAGAGGTaGAGCGAGCGAAGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPGLEDKTHHQLTQCSSTEQKR*SERRRG Trigger: TCCCCTCCTTCGCTCGCTCAACCTCTTTTGTTCAGT...TGAAGAACACTGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS-3UTR CAA 90 bp | AAATACCATGTTGCTGCCTGGTCTGGAGGACAAGACACACCATCAACTGACTCAAAAATAAATACCATGTaGCTGCCTGGTCTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KYHVAAWSGGQDTPSTDSKINTM*LPGLED Trigger: GTCCTCCAGACCAGGCAGCAACATGGTATTTATTTT...TGAGTCAGTTGATGGTGTGTCTTGTCCTCCAGACCAGGCAGCAACATGGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264335.13 ENST00000627231.2 |
||
| CDS CAA 90 bp | CCGAACCCAAGCCCCCGGGCCAGGCTCGCAGACGATGCCGCCATTTaGTCTCCTGTTCCCGGCCTCTGTGGGCGGCGGCAGAGGGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PNPSPRARLADDAAI*SPVPGLCGRRQRVR Trigger: TCGGACCCTCTGCCGCCGCCCACAGAGGCCGGGAACAGGAGACAAAATGGCGGCATCGTCTGCGAGCCTGGCCCGGGGGCTTGGGTTCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | CCCGAACCCAAGCCCCCGGGCCAGGCTCGCAGACGATaGCGCCATTTTGTCTCCTGTTCCCGGCCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PEPKPPGQARRR*RHFVSCSRPLW Trigger: CCACAGAGGCCGGGAACAGGAGACAAAATGGCGGCATCGTCTGCGAGCCTGGCCCGGGGGCTTGGGTTCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS TCA 72 bp | CTGAGGAAGCCCATCGCTCTCAAAGGTCCTCCTTTGTaGGACTCCACGGCCGCCGCCCCACACGGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRKPIALKGPPL*DSTAAAPHGAS Trigger: GGAGGCCCCGTGTGGGGCGGCGGCCGTGGAGTCTCACAAAGGAGGACCTTTGAGAGCGATGGGCTTCCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000572108.1 ENST00000576854.1 ENST00000630936.1 ENST00000631243.1 |
||
| CDS CCA 72 bp | CCGCGCTACAGCTCCCGGTCTTCGCTCTCTCCCATGTaGCGGGTGCTGCTTCCCCCGTCACCCCACCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: PRYSSRSSLSPM*RVLLPPSPHPI Trigger: AATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGCTGTAGCGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CCA 72 bp | GGTGCCGGCCTACGGGAAAGAAACCCGATCGCAGCATaGGAGCCTGCCACCGCCCGAAGACGAACTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGLRERNPIAA*EPATARRRTAV Trigger: CACTGCAGTTCGTCTTCGGGCGGTGGCAGGCTCCCATGCTGCGATCGGGTTTCTTTCCCGTAGGCCGGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | GCTCCCGGTCTTCGCTCTCTCCCATGTGGCGGGTGCTaGTTCCCCCGTCACCCCACCCAATTGTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: APGLRSLPCGGC*FPRHPTQLFST Trigger: TGTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | ACAGCTCCCGGTCTTCGCTCTCTCCCATGTGGCGGGTaGTGCTTCCCCCGTCACCCCACCCAATTGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAPGLRSLPCGG*CFPRHPTQLFS Trigger: GGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGAGCGAAGACCGGGAGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CAA 72 bp | TGTGGCGGGTGCTGCTTCCCCCGTCACCCCACCCAATaGTTCTCCACATCCCAAGGCCGTCCCAGAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGGCCFPRHPTQ*FSTSQGRPRSS Trigger: GGAGCTTCTGGGACGGCCTTGGGATGTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS CAA 90 bp | TCTCTCCCATGTGGCGGGTGCTGCTTCCCCCGTCACCCCACCCAATaGTTCTCCACATCCCAAGGCCGTCCCAGAAGCTCCCATGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLPCGGCCFPRHPTQ*FSTSQGRPRSSHEG Trigger: ACCCTCATGGGAGCTTCTGGGACGGCCTTGGGATGTGGAGAACAATTGGGTGGGGTGACGGGGGAAGCAGCACCCGCCACATGGGAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS TCA 72 bp | GTTCTCCACATCCCAAGGCCGTCCCAGAAGCTCCCATaGGGGTGGCTCGTTCGGAGACAGCACCCGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VLHIPRPSQKLP*GWLVRRQHPPS Trigger: AGATGGCGGGTGCTGTCTCCGAACGAGCCACCCTCATGGGAGCTTCTGGGACGGCCTTGGGATGTGGAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | CCTACGGGAAAGAAACCCGATCGCAGCATGGGAGCCTaGCACCGCCCGAAGACGAACTGCAGTGATTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PTGKKPDRSMGA*HRPKTNCSDSH Trigger: GTGGGAATCACTGCAGTTCGTCTTCGGGCGGTGGCAGGCTCCCATGCTGCGATCGGGTTTCTTTCCCGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS TCA 72 bp | CCCACCATCATCCACGACTGTCCCCCACCTCAGGCCTaGGGAAGCCCATCGCTCTCAAAGGTCCTCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PTIIHDCPPPQA*GSPSLSKVLLC Trigger: ACAAAGGAGGACCTTTGAGAGCGATGGGCTTCCTCAGGCCTGAGGTGGGGGACAGTCGTGGATGATGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | AGATCCCCCACGAAGTACAGACCAGCATTCCGAGCCTaGAGAGTCAACCAAAATACAGTTACTGAACACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RSPTKYRPAFRA*RVNQNTVTEHY Trigger: ATAGTGTTCAGTAACTGTATTTTGGTTGACTCTGCAGGCTCGGAATGCTGGTCTGTACTTCGTGGGGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000576854.1 ENST00000631243.1 |
||
| CDS GCA 72 bp | CTTTATTTCAACAGGTCTTCCCATTTGTCATCACGGTaGGCACAAACTGTAAAGTCATCGTTTTTACAAACG | + |
|
Preference number: 6 (lower is better) Translates to: LYFNRSSHLSSR*AQTVKSSFLQT Trigger: CGTTTGTAAAAACGATGACTTTACAGTTTGTGCGCACCGTGATGACAAATGGGAAGACCTGTTGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000498643.1 ENST00000576854.1 ENST00000628981.1 ENST00000631243.1 |
||