Pregenerated sensors for YTHDF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000149658Ensembl transcript IDs: ENST00000370334.4, ENST00000370339.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATCATGCCCCAACACCATCCAGCCCAATCGGACACCAGGACAGTaGGGGACGGGTGGCTGTTCAGTGGGCAACAGATCTGGAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: TSCPNTIQPNRTPGQ*GTGGCSVGNRSGRK Trigger: TTTCCTTCCAGATCTGTTGCCCACTGAACAGCCACCCGTCCCTCACTGTCCTGGTGTCCGATTGGGCTGGATGGTGTTGGGGCATGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR GCA 90 bp | AAGCGTCTGCTCTCTAGGACGGTAAGGATCCTCTACAAGGGCACGTaGAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: KRLLSRTVRILYKGT*RSRRWSVRHGHHFH Trigger: ATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTTACCGTCCTAGAGAGCAGACGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR CCA 90 bp | AGGACGGTAAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTaGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACT | + |
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Preference number: 1 (lower is better) Translates to: RTVRILYKGTCRSRR*SVRHGHHFHASTQT Trigger: AGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTTACCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR CCA 90 bp | CAACACCATCCAGCCCAATCGGACACCAGGACAGTGAGGGACGGGTaGCTGTTCAGTGGGCAACAGATCTGGAAGGAAAGATTTTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: QHHPAQSDTRTVRDG*LFSGQQIWKERFSK Trigger: TTTTGAAAATCTTTCCTTCCAGATCTGTTGCCCACTGAACAGCCACCCGTCCCTCACTGTCCTGGTGTCCGATTGGGCTGGATGGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTCGGACACCAGGACAGTaGGGGACGGGTGGCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LQGHVQIQALERQAWAPFRTPGQ*GTGGCS Trigger: TGAACAGCCACCCGTCCCTCACTGTCCTGGTGTCCG...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCGGGTGGCTGTTCAGTaGGCAACAGATCTGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHRVAVQ*ATDLEG Trigger: TCCTTCCAGATCTGTTGCCCACTGAACAGCCACCCG...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACAAGAATGCCCGACCCTaGACCAGACCTAAAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHKNARP*TRPKAP Trigger: AGGTGCTTTAGGTCTGGTTCAGGGTCGGGCATTCTT...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR GCA 90 bp | TCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCCTCCACACATCATaGCCCAACACCATCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: STRARADPGAGASGMGTIFLHTS*PNTIQP Trigger: GGGCTGGATGGTGTTGGGGCATGATGTGTGGAGGAA...AATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACATTAGACACACACGATaGAATTTACAACCAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHIRHTR*NLQPAA Trigger: TGCTGCTGGTTGTAAATTTCATCGTGTGTGTCTAAT...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGGCAAACAACAAAGAATaGCCGACCCTGAACCAGACC | + |
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Preference number: 2 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRANNKE*PTLNQT Trigger: GGTCTGGTTCAGGGTCGGGCATTCTTTGTTGTTTGC...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR GCA 72 bp | CTCTCTAGGACGGTAAGGATCCTCTACAAGGGCACGTaGAGATCCAGGCGCTGGAGCGTCAGGCATGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: LSRTVRILYKGT*RSRRWSVRHGH Trigger: GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTTACCGTCCTAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR TCA 72 bp | CCCAACACCATCCAGCCCAATCGGACACCAGGACAGTaGGGGACGGGTGGCTGTTCAGTGGGCAACAGATCT | + |
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Preference number: 3 (lower is better) Translates to: PNTIQPNRTPGQ*GTGGCSVGNRS Trigger: AGATCTGTTGCCCACTGAACAGCCACCCGTCCCTCACTGTCCTGGTGTCCGATTGGGCTGGATGGTGTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR CCA 72 bp | GGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATaGGCACCATTTTCATGCTTCAACTCAAACTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GHVQIQALERQA*APFSCFNSNSR Trigger: CCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR CCA 72 bp | AGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTaGAGCGTCAGGCATGGGCACCATTTTCATGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RILYKGTCRSRR*SVRHGHHFHAS Trigger: TGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATAACTCAGAGGGTCTTTaGGAGCAAGTAGTTTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDNSEGL*EQVVFR Trigger: TCTGAAAACTACTTGCTCCAAAAGACCCTCTGAGTT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGTGCCTGCTGGGGGACTaGGGCCTTCGGCACAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWCLLGD*GLRHRP Trigger: GGGCCTGTGCCGAAGGCCCCAGTCCCCCAGCAGGCA...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTACCAGACCCCGGCACTaGTGCCGTAGTCCACGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LQGHVQIQALERQAWAPFTRPRH*CRSPRG Trigger: CCCCCGTGGACTACGGCACCAGTGCCGGGGTCTGGT...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCGGTTGAGCCAAAGCTaGGGGCTGTGCTGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHRLSQS*GLCWER Trigger: CCTCTCCCAGCACAGCCCCCAGCTTTGGCTCAACCG...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTGAGAGTTGCTATCGCTaGCAGCCCCTCCGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LQGHVQIQALERQAWAPFESCYR*QPLRSA Trigger: GGCAGAGCGGAGGGGCTGGCAGCGATAGCAACTCTC...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGTGCAGATCCAGGCGCTaGAGCGTCAGGCATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWCRSRR*SVRHGH Trigger: GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCA...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | TCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTGGCCGACATGCTTCATaGACAACTAGACGCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: STRARADPGAGASGMGTIGRHAS*TTRRGA Trigger: GGCCCCGCGTCTAGTTGTTCATGAAGCATGTCGGCC...AATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGCTCTACAAGGGCACGTaGAGATCCAGGCGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWLYKGT*RSRRWS Trigger: GCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAG...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGACCCCGGCACTGGTaGCGTAGTCCACGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: QALERQAWAPFSCFNSNSRPRHW*RSPRGT Trigger: AGTCCCCCGTGGACTACGGCACCAGTGCCGGGGTCT...GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGTCTGGGTGTCCACGCTaGTGGCCGACATGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWSGCPR*WPTCFM Trigger: CATGAAGCATGTCGGCCACCAGCGTGGACACCCAGA...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACTCCCCCAGGCCCCCAGGCTaGCCAAAAACAGCATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: QALERQAWAPFSCFNSNSPRPPG*PKTASC Trigger: GCACGATGCTGTTTTTGGGCAGCCTGGGGGCCTGGG...GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGTAGGGGTCGCTCATTaGGGGGTAACTGTTACTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWVGVAH*GVTVTL Trigger: CAGAGTAACAGTTACCCCTCAATGAGCGACCCCTAC...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTGCAAACAACAAAGAATaGCCGACCCTGAACCAGACC | + |
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Preference number: 4 (lower is better) Translates to: LQGHVQIQALERQAWAPFANNKE*PTLNQT Trigger: GGTCTGGTTCAGGGTCGGGCATTCTTTGTTGTTTGC...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACTCCACGGCGGGTAATAGCTaGACAGGTAGGGGTCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QALERQAWAPFSCFNSNSTAGNS*TGRGRS Trigger: TGAGCGACCCCTACCTGTCCAGCTATTACCCGCCGT...GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACTCCGTAGGTGGTGAGGTATaGAATCGGAGGGTCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QALERQAWAPFSCFNSNSVGGEV*NRRVPC Trigger: GCAGGGGACCCTCCGATTCCATACCTCACCACCTAC...GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGAGCTGGGGGCTGTGCTaGGAGAGGCTGAGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRSWGLC*ERLSHL Trigger: CAGGTGGCTCAGCCTCTCCCAGCACAGCCCCCAGCT...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGGGTAGACGGGCCCCTTaGTGCTCATGCAGCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRGRRAP*CSCSGR Trigger: CCTTCCGCTGCATGAGCAGCAAGGGGCCCGTCTACC...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGAGTAAGGAAATCCAATaGACGGCGGGTAATAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWSKEIQ*TAGNSW Trigger: CCAGCTATTACCCGCCGTCCATTGGATTTCCTTACT...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGCGCGTTTCTGTTGCGTaGGGCAACCCAGCGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRRVSVA*GNPAGL Trigger: CAGACCCGCTGGGTTGCCCCACGCAACAGAAACGCG...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGACTGTTACTCTGATTTaGCTGTCCAGTAAGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KDPLQGHVQIQALERQAWTVTLI*LSSKVG Trigger: CCCTACCTTACTGGACAGTCAAATCAGAGTAACAGT...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGAGGCCAACCATGCCCTaGTCCAGGCTGTTCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTRPTMP*SRLFIP Trigger: CGGGATGAACAGCCTGGAGCAGGGCATGGTTGGCCT...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGGACTCTGCCGTTCCTTaGGCACCACCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTDSAVP*APPPPP Trigger: AGGAGGAGGAGGTGGTGCGCAAGGAACGGCAGAGTC...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | TCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGGTCCCTCATTCCACAAAACAGCTGTCCGTAGGTGGTaGGGTATGGAATCGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: STQTPGGSELNGPSFHKTAVRRW*GMESEG Trigger: ACCCTCCGATTCCATACCTCACCACCTACGGACAGC...TGTTTTGTGGAATGAGGGACCGTTGAGCTCACTACCACCTGGAGTTTGAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATAGCCTGTGGAGAGGGTaGCTGCTGGGGGACTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDSLWRG*LLGDWG Trigger: GCCCCAGTCCCCCAGCAGGCACCCTCTCCACAGGCT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGTCTAAGGGCACCTCCTaGGTGTCCCGGGAGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTSKGTS*VSREFV Trigger: CACAAACTCCCGGGACACCCAGGAGGTGCCCTTAGA...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGACTTGTCCCCCATGCTaGGAACGCAGGGTTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTTCPPC*ERRVFR Trigger: CCTGAAAACCCTGCGTTCTCAGCATGGGGGACAAGT...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | TCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGGTCCCTCATTCCACAAAACAAAGGACACCAGTCAGTaGCACGCTGCTGACGACAGA | + |
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Preference number: 4 (lower is better) Translates to: STQTPGGSELNGPSFHKTKDTSQ*HAADDR Trigger: TCTGTCGTCAGCAGCGTGGCACTGACTGGTGTCCTT...TGTTTTGTGGAATGAGGGACCGTTGAGCTCACTACCACCTGGAGTTTGAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATACGCCGCGTTTCTGTTaGGTGGGGCAACCCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDTPRFC*VGQPSG Trigger: CCCGCTGGGTTGCCCCACGCAACAGAAACGCGGCGT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGCGTTATTCTCCAGCCTaGTGTGCCGGAGCTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTRYSPA*CAGAGY Trigger: ATAACCAGCTCCGGCACATCAGGCTGGAGAATAACG...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAAGGCGTCGACTCCAATaGCGGCGGCGGCGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRRRRLQ*RRRRRQ Trigger: CTGTCGCCGCCGCCGCCGCCATTGGAGTCGACGCCT...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370334.4 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATAATCGGAGGGTCCCCTaGAGTAGACCACGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDNRRVP*SRPRSL Trigger: GAGGCTCCGTGGTCTACTGCAGGGGACCCTCCGATT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGTGTGGAGAGGGTGCCTaGTGGGGGACTGGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKCGEGA*WGTGAF Trigger: GAAGGCCCCAGTCCCCCAGCAGGCACCCTCTCCACA...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAAGACGGGCCCCTTGCTaGTCATGCAGCGGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRRRAPC*SCSGRR Trigger: GCGCCTTCCGCTGCATGAGCAGCAAGGGGCCCGTCT...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGCGGACACCAGGACAGTaGGGGACGGGTGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKRTPGQ*GTGGCS Trigger: TGAACAGCCACCCGTCCCTCACTGTCCTGGTGTCCG...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGACAGTTCAGAGGAAGTaGCACGCTCTAAATACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRTVQRK*HALNTS Trigger: ACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGT...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATAGGCGCTTGTTGCCGTaGTCTGTGCTACACCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDRRLLP*SVLHQM Trigger: CATCTGGTGTAGCACAGAGCACGGCAACAAGCGCCT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGGCCCCTTGCTGCTCATaGAGCGGAAGGCGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKAPCCS*SGRRCP Trigger: TGGACAGCGCCTTCCGCTGCATGAGCAGCAAGGGGC...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGGGCCGACATGCTTCATaGACAACTAGACGCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKGRHAS*TTRRGA Trigger: GGCCCCGCGTCTAGTTGTTCATGAAGCATGTCGGCC...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATAAGAATGCCCGACCCTaGACCAGACCTAAAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDKNARP*TRPKAP Trigger: AGGTGCTTTAGGTCTGGTTCAGGGTCGGGCATTCTT...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATTTCTCCAGCCTGATGTaGCGGAGCTGGTTATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDFSSLM*RSWLLG Trigger: ACCCAATAACCAGCTCCGGCACATCAGGCTGGAGAA...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | TCAGGCAGTAACAGTTCAGAGGAAGTGACACGCTCTAAATACAAGTCTAATGATCTGGAGCGTCAGGCATaGGCACCATTTTCATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSNSSEEVTRSKYKSNDLERQA*APFSCF Trigger: GAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAG...ATCATTAGACTTGTATTTAGAGCGTGTCACTTCCTCTGAACTGTTACTGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGTCTGGGTGTCCACGCTaGTGGCCGACATGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKSGCPR*WPTCFM Trigger: CATGAAGCATGTCGGCCACCAGCGTGGACACCCAGA...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGTGTCCTTTTGTTCTCTaGGTGTCCACGCTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKCPFVL*VSTLVA Trigger: GGCCACCAGCGTGGACACCCAGAGAACAAAAGGACA...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR TCA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGCTGCCGTTCCTGATTTaGCTGTCCAGTAAGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKLPFLI*LSSKVG Trigger: CCCTACCTTACTGGACAGTCAAATCAGGAACGGCAG...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370334.4 |
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| CDS-3UTR GCA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGATGTTTGTTTCGACTCTaGCGTTCCTTGCGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRCLFRL*RSLRTT Trigger: GGTGGTGCGCAAGGAACGGCAGAGTCGAAACAAACA...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGATGTTGCCGTGCTCTGTaGTACACCAGATGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRCCRAL*YTRWST Trigger: AGTACTCCATCTGGTGTAGCACAGAGCACGGCAACA...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAGAACATGTAAGAAACTaGTTCGCCCTCATTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTRVLNCFQSQTLEHVREHVRN*FALIVC Trigger: ACAAACAATGAGGGCGAACCAGTTTCTTACATGTTC...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS TCA 90 bp | GGCGGCTGCTGGGCGCGCGGGCCCCTGGCGAGGCGGCAGCGGCGGTaGGCCCGGGACGCGGACGCACTGAGGAGGCGTCGACTCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GGCWARGPLARRQRR*ARDADALRRRRLQW Trigger: CCATTGGAGTCGACGCCTCCTCAGTGCGTCCGCGTCCCGGGCTCACCGCCGCTGCCGCCTCGCCAGGGGCCCGCGCGCCCAGCAGCCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCTGTCCAGGCGCTTGTaGCCGTGCTCTGTGCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHLSRRL*PCSVLH Trigger: GTGTAGCACAGAGCACGGCAACAAGCGCCTGGACAG...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTCATGCTTCAACTCAAACTCCAACGCCGCGTTTCTGTaGCGTGGGGCAACCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QALERQAWAPFSCFNSNSNAAFL*RGATQR Trigger: CCGCTGGGTTGCCCCACGCAACAGAAACGCGGCGTT...GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | ATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACGAGTTTGTGACCGGTTaGTTGTCGTTATTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILYKGTCRSRRWSVRHGHEFVTG*LSLFSS Trigger: GCTGGAGAATAACGACAACAAACCGGTCACAAACTC...GTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAAACCCAATGTCGTCCAGGACTCCATTCAGGCAGTAACAGTTCAGAGGGCGCTGTCCAGGCGCTaGTTGCCGTGCTCTGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EEKPNVVQDSIQAVTVQRALSRR*LPCSVL Trigger: TAGCACAGAGCACGGCAACAAGCGCCTGGACAGCGC...CCTCTGAACTGTTACTGCCTGAATGGAGTCCTGGACGACATTGGGTTTTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGGTCCCTCATTCCACAAAACGACTCTGCCGTTCCTaGCGCACCACCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLKLQVVVSSTVPHSTKRLCRS*RTTSSS Trigger: GGAGGAGGAGGTGGTGCGCAAGGAACGGCAGAGTCG...TTTTGTGGAATGAGGGACCGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCCTCTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGTATTATCTTGTCCTTTaGTTCTCTGGGTGTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: KDPLQGHVQIQALERQAWYYLVL*FSGCPR Trigger: GCGTGGACACCCAGAGAACAAAAGGACAAGATAATA...CCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAGAGGATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTTGCCGGAGCTGGTTATaGGGTACATCCTTAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQGHVQIQALERQAWAPFCRSWL*GTSLTK Trigger: TTTTGTTAAGGATGTACCCAATAACCAGCTCCGGCA...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CTACAAGGGCACGTGCAGATCCAGGCGCTGGAGCGTCAGGCATGGGCACCATTTAACTCAGAGGGTCTTTaGGAGCAAGTAGTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQGHVQIQALERQAWAPFNSEGL*EQVVFR Trigger: TCTGAAAACTACTTGCTCCAAAAGACCCTCTGAGTT...AAATGGTGCCCATGCCTGACGCTCCAGCGCCTGGATCTGCACGTGCCCTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGGGTAGGGGTCGCTCATaGAGGGGTAACTGTTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTGRGRS*RGNCYS Trigger: AGAGTAACAGTTACCCCTCAATGAGCGACCCCTACC...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCACCATTTTCATGCTTCAACTCAAACTCCAGGTGGTAGTGAGCTCAACGACATTTGTCCCACCGTaGCCAGAAAGGACACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MGTIFMLQLKLQVVVSSTTFVPP*PERTPV Trigger: GACTGGTGTCCTTTCTGGCAACGGTGGGACAAATGT...CGTTGAGCTCACTACCACCTGGAGTTTGAGTTGAAGCATGAAAATGGTGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAGTTCGCCCTCATTGTTaGTTTCGACTCTGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRVRPHC*FRLCRS Trigger: GGAACGGCAGAGTCGAAACAAACAATGAGGGCGAAC...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | ACCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGGTTCGCCCTCATTGTTaGTTTCGACTCTGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKHTCFKLFSKSNVRTCKVRPHC*FRLCRS Trigger: GGAACGGCAGAGTCGAAACAAACAATGAGGGCGAAC...CTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAACTGGTTCGCCCTCATaGTTTGTTTCGACTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRTGSPS*FVSTLP Trigger: CGGCAGAGTCGAAACAAACAATGAGGGCGAACCAGT...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS CCA 90 bp | GTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAAACTaGTTCGCCCTCATTGTTTGTTTCGACTCTGCCGTTCCTTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLNCFQSQTLEHVRN*FALIVCFDSAVPCA Trigger: TGCGCAAGGAACGGCAGAGTCGAAACAAACAATGAGGGCGAACCAGTTTCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGATTTGTGACCGGTTTGTaGTCGTTATTCTCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRFVTGL*SLFSSL Trigger: CAGGCTGGAGAATAACGACAACAAACCGGTCACAAA...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS CCA 90 bp | GTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGAAACTaGTTCGCCCTCATTGTTTGTTTCGACTCTGCCGTTCCTGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLNCFQSQTLEHVRN*FALIVCFDSAVPDL Trigger: CAAATCAGGAACGGCAGAGTCGAAACAAACAATGAGGGCGAACCAGTTTCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370334.4 |
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| CDS-3UTR CAA 90 bp | CCAAGCACACGTGTTTTAAACTGTTTTCAAAGTCAAACGTTAGAACATGTAAGATATTATCTTGTCCTTTaGTTCTCTGGGTGTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: PSTRVLNCFQSQTLEHVRYYLVL*FSGCPR Trigger: GCGTGGACACCCAGAGAACAAAAGGACAAGATAATA...TCTTACATGTTCTAACGTTTGACTTTGAAAACAGTTTAAAACACGTGTGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS TCA 72 bp | GGCGGCAGCGGCGGTGAGCCCGGGACGCGGACGCACTaGGGAGGCGTCGACTCCAATGGCGGCGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSGGEPGTRTH*GGVDSNGGGGG Trigger: GCCGCCGCCGCCGCCATTGGAGTCGACGCCTCCTCAGTGCGTCCGCGTCCCGGGCTCACCGCCGCTGCCGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS TCA 72 bp | TCTCTGGGTGTCCACGCTGGTGGCCGACATGCTTCATaGACAACTAGACGCGGGGCCGGGGCGCCCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGVHAGGRHAS*TTRRGAGAPAG Trigger: GCCGGCGGGCGCCCCGGCCCCGCGTCTAGTTGTTCATGAAGCATGTCGGCCACCAGCGTGGACACCCAGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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| CDS CAA 72 bp | ACGGCGGGTAATAGCTGGACAGGTAGGGGTCGCTCATaGAGGGGTAACTGTTACTCTGATTTGACTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAGNSWTGRGRS*RGNCYSDLTVQ Trigger: CTGGACAGTCAAATCAGAGTAACAGTTACCCCTCAATGAGCGACCCCTACCTGTCCAGCTATTACCCGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370339.8 |
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| CDS CCA 72 bp | TGTTTTCAAAGTCAAACGTTAGAACATGTAAGAAACTaGTTCGCCCTCATTGTTTGTTTCGACTCTGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: CFQSQTLEHVRN*FALIVCFDSAV Trigger: AACGGCAGAGTCGAAACAAACAATGAGGGCGAACCAGTTTCTTACATGTTCTAACGTTTGACTTTGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370334.4 ENST00000370339.8 |
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