RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YTHDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000083896

Ensembl transcript IDs: ENST00000344157.9, ENST00000355665.7, ENST00000505251.1, ENST00000506175.1, ENST00000507529.1, ENST00000510746.1, ENST00000579690.5, ENST00000613637.3, ENST00000615500.4, ENST00000625493.1, ENST00000627135.1, ENST00000627168.2, ENST00000628264.1, ENST00000629100.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGTGTGTCACAGTCACCCTTACGTTGGGTCAGGGAACTCTAGCTTaGTCAGTTAACTGCTGGCAACAGTTCCTTCTTCAATTCCATGCC +
Preference number: 1 (lower is better)
Translates to: MCVTVTLTLGQGTLA*SVNCWQQFLLQFHA
Trigger: GGCATGGAATTGAAGAAGGAACTGTTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGTGACACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR CCA 90 bp GCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTaGAGGGGAAGGCTAAACAATAGCATCAACCACGCTACTGAACAT +
Preference number: 1 (lower is better)
Translates to: ATHASCEHSKPMYTI*RGRLNNSINHATEH
Trigger: ATGTTCAGTAGCGTGGTTGATGCTATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR CCA 90 bp CTCACAGAGGTGACCATAACATGTGCCTCTCTTGCTTCCCAATGCTaGGAGACAAAGAACCCCATTTCCTTGGAAATACAGATTGGATTA +
Preference number: 1 (lower is better)
Translates to: LTEVTITCASLASQC*ETKNPISLEIQIGL
Trigger: TAATCCAATCTGTATTTCCAAGGAAATGGGGTTCTTTGTCTCCCAGCATTGGGAAGCAAGAGAGGCACATGTTATGGTCACCTCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR TCA 90 bp CTACAGCAGAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTaGTGGCAAAATACTCTGAAAAGTCAAACATTCAGGTGTTATAAC +
Preference number: 1 (lower is better)
Translates to: LQQNVDISKGKMPHL*WQNTLKSQTFRCYN
Trigger: GTTATAACACCTGAATGTTTGACTTTTCAGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTCTGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR GCA 90 bp CTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTaGATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACT +
Preference number: 1 (lower is better)
Translates to: LLQHCHTVKPSYFNI*ILDSSIIFTEPCAT
Trigger: AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR CCA 90 bp GAGCGGCTCTATTTCTATGTTATAGTTGGTTACCACTGGGAGAACTaGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAAAA +
Preference number: 1 (lower is better)
Translates to: ERLYFYVIVGYHWEN*TVNLKYRTNTRGLK
Trigger: TTTTAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTATAACATAGAAATAGAGCCGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR CCA 90 bp TGTTTTCTTGAGCGGCTCTATTTCTATGTTATAGTTGGTTACCACTaGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGA +
Preference number: 1 (lower is better)
Translates to: CFLERLYFYVIVGYH*ENWTVNLKYRTNTR
Trigger: TCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTATAACATAGAAATAGAGCCGCTCAAGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR TCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCGGCAGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAGRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCTGCC...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR TCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATGGCAGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHGRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCTGCC...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTCCAAGATCATGCCACTaGCCTCCACCTGGGCGACAG +
Preference number: 2 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSPRSCH*PPPGRQ
Trigger: CTGTCGCCCAGGTGGAGGGCAGTGGCATGATCTTGG...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR CAA 90 bp AACATGAAGCTAAAATTATCCATGTGTGTCACAGTCACCCTTACGTaGGGTCAGGGAACTCTAGCTTGGTCAGTTAACTGCTGGCAACAG +
Preference number: 2 (lower is better)
Translates to: NMKLKLSMCVTVTLT*GQGTLAWSVNCWQQ
Trigger: CTGTTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGTGACACACATGGATAATTTTAGCTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR TCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 2 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR TCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATATAGTTGGTTACCACTaGGAGAACTGGACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHIVGYH*ENWTVN
Trigger: GTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTAT...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCATAGTTGGTTACCACTaGGAGAACTGGACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVIVGYH*ENWTVN
Trigger: GTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTAT...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: SSAATHASCEHSKPMYTIWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 2 (lower is better)
Translates to: SSAATHASCEHSKPMYTIMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR TCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGAAGATGCCACACCTGTaGTGGCAAAATACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVKMPHL*WQNTLK
Trigger: TTTCAGAGTATTTTGCCATCACAGGTGTGGCATCTT...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCCCTTTAAGAGTAAAGTaGCTGTGTTGTTCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVPLRVK*LCCSFQ
Trigger: CTGAAAAGAACAACACAGGCACTTTACTCTTAAAGG...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 2 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTCTGTACTATGTGATCTaGTACACAGTACAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSLYYVI*YTVQLL
Trigger: CAACAGTTGTACTGTGTACCAGATCACATAGTACAG...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTAAACTACATGGACAATaGAAGCTTGGAGATAATGGC +
Preference number: 2 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSKLHGQ*KLGDNG
Trigger: GCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGCCTGAACAAAAAGCATaGTTTTATGTCCATTATTGC +
Preference number: 2 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVPEQKA*FYVHYC
Trigger: GCAATAATGGACATAAAAGCATGCTTTTTGTTCAGG...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR GCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGTTTAGAAAAATCCTCTaGTTAAGCCTGAAGGAAATG +
Preference number: 2 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVFRKIL*LSLKEM
Trigger: CATTTCCTTCAGGCTTAAGCAGAGGATTTTTCTAAA...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTTCAACTGTCAGCTGTaGATTTTTGGCGGATTTGAG +
Preference number: 2 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKFNCQL*IFGGFE
Trigger: CTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR GCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR GCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: FNICILDSSIIFTEPCATSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 2 (lower is better)
Translates to: FNICILDSSIIFTEPCATMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 2 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: FNICILDSSIIFTEPCATDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR TCA 72 bp ATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTATACAATTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: MGIVFRCHARKL*TFQANVYNLEG
Trigger: CCCCTCCAAATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR CCA 72 bp ACAGTCACCCTTACGTTGGGTCAGGGAACTCTAGCTTaGTCAGTTAACTGCTGGCAACAGTTCCTTCTTCAA +
Preference number: 3 (lower is better)
Translates to: TVTLTLGQGTLA*SVNCWQQFLLQ
Trigger: TTGAAGAAGGAACTGTTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 3 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTCACTTGAGGTCGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSHLRSS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCGACCTCAAGTG...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 3 (lower is better)
Translates to: CRIWESSSAATHASCEHSANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CAA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 3 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATACTACCTTTCTAATCTaGGGCAAGTTTACTAGCCTC +
Preference number: 3 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHTTFLI*GKFTSL
Trigger: GAGGCTAGTAAACTTGCCCAAGATTAGAAAGGTAGT...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR TCA 72 bp CTGCTGGCAACAGTTCCTTCTTCAATTCCATGCCCCTaGGGACTCTTAATGGTTAACATTATGACAAGACAG +
Preference number: 3 (lower is better)
Translates to: LLATVPSSIPCP*GLLMVNIMTRQ
Trigger: CTGTCTTGTCATAATGTTAACCATTAAGAGTCCTCAGGGGCATGGAATTGAAGAAGGAACTGTTGCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 3 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR CCA 72 bp GCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTaGAGGGGAAGGCTAAACAATAGCATCAACCACGCT +
Preference number: 3 (lower is better)
Translates to: ASCEHSKPMYTI*RGRLNNSINHA
Trigger: AGCGTGGTTGATGCTATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGCTTGGAATGTTCACAACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CAA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTAGTAAAGTGCCTGTGTaGTTCTTTTCAGGCCAATAT +
Preference number: 3 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSSKVPV*FFSGQY
Trigger: ATATTGGCCTGAAAAGAACAACACAGGCACTTTACT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR-3UTR CAA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR TCA 72 bp TCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATGATACTGCATGCTTGG +
Preference number: 3 (lower is better)
Translates to: SIQLSAVDFWRI*VFPVLMILHAW
Trigger: CCAAGCATGCAGTATCATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR GCA 72 bp AAGAATCAGTATCTACATTCTTGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAATTCAACTGTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: KNQYLHSWTVPF*PNKSVNSTVSC
Trigger: ACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATACTGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
3UTR TCA 72 bp AGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTaGCAAAAGCTGTCATGTGTACGAATATTAAATAAA +
Preference number: 3 (lower is better)
Translates to: SGVHERNHVFSQ*QKLSCVRILNK
Trigger: TTTATTTAATATTCGTACACATGACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR TCA 72 bp GTCAAACATTCAGGTGTTATAACTTGTATGAGATCCTaGTTTAATGGACATCTGCTAAATTTCCTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: VKHSGVITCMRS*FNGHLLNFLCP
Trigger: TGGACAGAGGAAATTTAGCAGATGTCCATTAAATCAGGATCTCATACAAGTTATAACACCTGAATGTTTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCCATTTACAGGGAGCGTaGACCATACACCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAHLQGA*TIHPSL
Trigger: AAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATG...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCTTTAGCACTCATTCCTaGTGGAAGCACCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAFSTHS*WKHPVY
Trigger: ATACACTGGGTGCTTCCAGCAGGAATGAGTGCTAAA...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTTCGGTTTCCGCCGCTaGCACCGCCGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFFGFRR*HRRRRL
Trigger: TAAGCGGCGGCGGCGGTGGCAGCGGCGGAAACCGAA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLAMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATTCGGTTTCCGCCGCTaGCACCGCCGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTFGFRR*HRRRRL
Trigger: TAAGCGGCGGCGGCGGTGGCAGCGGCGGAAACCGAA...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATTCGGTTTCCGCCGCTaGCACCGCCGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAFGFRR*HRRRRL
Trigger: TAAGCGGCGGCGGCGGTGGCAGCGGCGGAAACCGAA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGGGAAGGGAAACAGATaGCGACGGCGGGCGGCGCTA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLGKGNR*RRRAAL
Trigger: TAGCGCCGCCCGCCGTCGCCATCTGTTTCCCTTCCC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR TCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGGAGACTGTCCTTCCTaGTGTAATCCTCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSGDCPS*CNPHRG
Trigger: ACCTCTGTGAGGATTACATCAGGAAGGACAGTCTCC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGTCCGTCAGTCCGTCTaGCCGGATACGCGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAVRQSV*PDTRVA
Trigger: TGCGACGCGCGTATCCGGGCAGACGGACTGACGGAC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTTCGGTTTCCGCCGCTaGCACCGCCGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTFGFRR*HRRRRL
Trigger: TAAGCGGCGGCGGCGGTGGCAGCGGCGGAAACCGAA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACCATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCCATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATGCTGAGGCAGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHAEAGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCTGCCTCAGC...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCGACTGTCAGCCGCCATaGCTCCCCTTCGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFDCQPP*LPFGFR
Trigger: GCGGAAACCGAAGGGGAGCCATGGCGGCTGACAGTC...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCTCTATCAAAAACAATTaGAGATATGCCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLRQVRSLEVEFETSLASIKNN*RYASSS
Trigger: AGAGCTAGAGGCATATCTCCAATTGTTTTTGATAGA...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCCAAGATCATGCCACTaGCCTCCACCTGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSPRSCH*PPPGRQ
Trigger: CTGTCGCCCAGGTGGAGGGCAGTGGCATGATCTTGG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCCCAAGATCATGCCACTaGCCTCCACCTGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFPRSCH*PPPGRQ
Trigger: CTGTCGCCCAGGTGGAGGGCAGTGGCATGATCTTGG...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACGGTGACCATAACATGTaGCTCTCTTGCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNGDHNM*LSCFPM
Trigger: CATTGGGAAGCAAGAGAGGCACATGTTATGGTCACC...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCACGGGCGGCGCTAAAATaGAGCCTGCTTCCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAARAALK*SLLPAR
Trigger: TCGCGCAGGAAGCAGGCTCCATTTTAGCGCCGCCCG...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACACGGGCGGCGCTAAAATaGAGCCTGCTTCCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTRAALK*SLLPAR
Trigger: TCGCGCAGGAAGCAGGCTCCATTTTAGCGCCGCCCG...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAGACTGTCAGCCGCCATaGCTCCCCTTCGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLDCQPP*LPFGFR
Trigger: GCGGAAACCGAAGGGGAGCCATGGCGGCTGACAGTC...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSSSLED*LDLLAR
Trigger: ACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCTCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACCAGGGAACTCTAGCTTaGTCAGTTAACTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNQGTLA*SVNCWQ
Trigger: TTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTG...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTIYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGGCAGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLGRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCTGCC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATATGGAGCCTGCTTCCTaGGCGAAACAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHMEPAS*AKQSRS
Trigger: GGAGCGGGATTGTTTCGCGCAGGAAGCAGGCTCCAT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATGGAGCCTGCTTCCTaGGCGAAACAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFMEPAS*AKQSRS
Trigger: GGAGCGGGATTGTTTCGCGCAGGAAGCAGGCTCCAT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSSVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATACGGGCGGCGCTAAAATaGAGCCTGCTTCCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIRAALK*SLLPAR
Trigger: TCGCGCAGGAAGCAGGCTCCATTTTAGCGCCGCCCG...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTCATTTACAGGGAGCGTaGACCATACACCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTIHLQGA*TIHPSL
Trigger: AAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATG...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCAGCACTCATTCCTGCTaGAAGCACCCAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVSTHSC*KHPVYR
Trigger: CCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCT...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATGGAGCCTGCTTCCTaGGCGAAACAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLMEPAS*AKQSRS
Trigger: GGAGCGGGATTGTTTCGCGCAGGAAGCAGGCTCCAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTGCTGAGGCAGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSAEAGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCTGCCTCAGC...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCTATCCAAGGGCAAGATaGCACACCTGTGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVYPRAR*HTCDGK
Trigger: TTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATA...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTACGGGCGGCGCTAAAATaGAGCCTGCTTCCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLRAALK*SLLPAR
Trigger: TCGCGCAGGAAGCAGGCTCCATTTTAGCGCCGCCCG...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGACTGTCAGCCGCCATaGCTCCCCTTCGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATDCQPP*LPFGFR
Trigger: GCGGAAACCGAAGGGGAGCCATGGCGGCTGACAGTC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTATCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTAGTTTGAGACCAGCCTaGCCAACATGTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSSLRPA*PTCWNP
Trigger: GGGGTTCCAACATGTTGGCCAGGCTGGTCTCAAACT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACTGGTCAGTTAACTGCTaGCAACAGTTCCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNWSVNC*QQFLLQ
Trigger: TTGAAGAAGGAACTGTTGCCAGCAGTTAACTGACCA...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCCAGGGAACTCTAGCTTaGTCAGTTAACTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVQGTLA*SVNCWQ
Trigger: TTGCCAGCAGTTAACTGACCAAGCTAGAGTTCCCTG...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATCCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCATACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATATGGAGCCTGCTTCCTaGGCGAAACAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYMEPAS*AKQSRS
Trigger: GGAGCGGGATTGTTTCGCGCAGGAAGCAGGCTCCAT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR GCA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTCTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSLAGSA*TSIHFK
Trigger: CTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAG...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTGCTTGGTCAGTTAACTaGTGGCAACAGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTIAWSVN*WQQFLL
Trigger: AAGAAGGAACTGTTGCCAGCAGTTAACTGACCAAGC...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTYARRT*PLNTQP
Trigger: AGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTA...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTCTTATAAGGTTCTCTaGAGGCACTACTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSSYKVL*RHYLID
Trigger: GTCTATCAAGTAGTGCCTCCAGAGAACCTTATAAGA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCCAGAACCAGAGTCACTaGCCTCACTTCGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRQNQSH*PHFECH
Trigger: ATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTG...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCCCACATCCCGGACTaGTTCTCGACGGGATGGACG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSHIPD*FSTGWT
Trigger: CGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATCGTCTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHRLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGACG...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAGTTTGAGACCAGCCTaGCCAACATGTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSLRPA*PTCWNP
Trigger: GGGGTTCCAACATGTTGGCCAGGCTGGTCTCAAACT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCTCTGTCCATGTCTTTTaGAGACTGTCCTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVSVHVF*RLSFLM
Trigger: CATCAGGAAGGACAGTCTCCAAAAGACATGGACAGA...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR CAA 72 bp CTAAAATTATCCATGTGTGTCACAGTCACCCTTACGTaGGGTCAGGGAACTCTAGCTTGGTCAGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: LKLSMCVTVTLT*GQGTLAWSVNC
Trigger: GCAGTTAACTGACCAAGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGTGACACACATGGATAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTIVIANR*AQWLRN
Trigger: GTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAAC...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHVIANR*AQWLRN
Trigger: GTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAAC...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTISLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACGACGCATTTTATGAATaGCCTGATACAAGTCAATAC +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNDAFYE*PDTSQY
Trigger: GTATTGACTTGTATCAGGTCATTCATAAAATGCGTC...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACACCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATGWTSS*SGLRMH
Trigger: ATGCATTCTCAGCCCCGATCACGAGGACGTCCATCC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTATCTCGGCGAACTCCTaGAAATCGTCTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFISANS*KSSVHF
Trigger: GAAGTGGACAGACGATTTTCAGGAGTTCGCCGAGAT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR TCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTACACAAAATGCCAATaGAGTGACTTACCATGTATC +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSYTKCQ*SDLPCI
Trigger: GATACATGGTAAGTCACTTCATTGGCATTTTGTGTA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGGCAGGAGGTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQGRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAACCTCCTGCC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTGGAGACTGTCCTTCCTaGTGTAATCCTCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFGDCPS*CNPHRG
Trigger: ACCTCTGTGAGGATTACATCAGGAAGGACAGTCTCC...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACTTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCGGTGACCATAACATGTaGCTCTCTTGCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRGDHNM*LSCFPM
Trigger: CATTGGGAAGCAAGAGAGGCACATGTTATGGTCACC...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKYARRT*PLNTQP
Trigger: AGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYYARRT*PLNTQP
Trigger: AGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCATACACCCTTCGCTTTaGCAAGAGACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVIHPSL*QETHSH
Trigger: ATGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTAT...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCATTTACAGGGAGCGTaGACCATACACCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSHLQGA*TIHPSL
Trigger: AAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAGCACTCATTCCTGCTaGAAGCACCCAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSTHSC*KHPVYR
Trigger: CCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCCTTGGAAATACAGATTaGATTACGGCTGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVLGNTD*ITAGSK
Trigger: TTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAAG...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATTGGTCAGTTAACTGCTaGCAACAGTTCCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHWSVNC*QQFLLQ
Trigger: TTGAAGAAGGAACTGTTGCCAGCAGTTAACTGACCA...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGCCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAATCTCGGCGAACTCCTaGAAATCGTCTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAISANS*KSSVHF
Trigger: GAAGTGGACAGACGATTTTCAGGAGTTCGCCGAGAT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR TCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAATCTCGGCGAACTCCTaGAAATCGTCTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTISANS*KSSVHF
Trigger: GAAGTGGACAGACGATTTTCAGGAGTTCGCCGAGAT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATYFSGH*QQLVCD
Trigger: GTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGGTCCTTTTGGGGAACTaGCATGGACACTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKVLLGN*HGHWEE
Trigger: TTCCTCCCAGTGTCCATGTCAGTTCCCCAAAAGGAC...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAGTCCTTTTGGGGAACTaGCATGGACACTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLVLLGN*HGHWEE
Trigger: TTCCTCCCAGTGTCCATGTCAGTTCCCCAAAAGGAC...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCAAGACAGGATGTATGTaGCCCTCAGAAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFKTGCM*PSERPR
Trigger: TCGTGGTCTTTCTGAGGGTCACATACATCCTGTCTT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGTTCCCTCACACCTTTaGCTCCTTGTGCACTTACTA +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLVPSHL*LLVHLL
Trigger: TAGTAAGTGCACAAGGAGGCAAAGGTGTGAGGGAAC...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR GCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTGTTCCCTCACACCTTTaGCTCCTTGTGCACTTACTA +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFVPSHL*LLVHLL
Trigger: TAGTAAGTGCACAAGGAGGCAAAGGTGTGAGGGAAC...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATYARRT*PLNTQP
Trigger: AGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATCTCTCAGAACCATCTaGCGTAGGAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASLRTI*RRRFGP
Trigger: AGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCTCTCAGAACCATCTaGCGTAGGAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSLRTI*RRRFGP
Trigger: AGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTCTCTCAGAACCATCTaGCGTAGGAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNSLRTI*RRRFGP
Trigger: AGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSSSLED*LDLLAR
Trigger: ACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGA...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCAGAACCAGAGTCACTaGCCTCACTTCGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNQNQSH*PHFECH
Trigger: ATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCACAGAACCAGAGTCACTaGCCTCACTTCGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSQNQSH*PHFECH
Trigger: ATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTG...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCTCTATCAAAAACAATTaGAGATATGCCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSSIKNN*RYASSS
Trigger: AGAGCTAGAGGCATATCTCCAATTGTTTTTGATAGA...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCATTTACAGGGAGCGTaGACCATACACCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNHLQGA*TIHPSL
Trigger: AAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAAGCACTCATTCCTGCTaGAAGCACCCAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASTHSC*KHPVYR
Trigger: CCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAAGCACTCATTCCTGCTaGAAGCACCCAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSTHSC*KHPVYR
Trigger: CCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHTSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTITSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGGCTATTCAGTCCTTTTaGGGAACTGACATGGACACT +
Preference number: 4 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVAIQSF*GTDMDT
Trigger: AGTGTCCATGTCAGTTCCCCAAAAGGACTGAATAGC...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAGATTGGATTACGGCTaGCTCCAAAACCAACATGGC +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFRLDYG*LQNQHG
Trigger: GCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTTCTGTCCATGTCTTTTaGAGACTGTCCTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSSVHVF*RLSFLM
Trigger: CATCAGGAAGGACAGTCTCCAAAAGACATGGACAGA...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGTTTCAAACTGCATTTaGAATGTTTCCTACCCAAAT +
Preference number: 4 (lower is better)
Translates to: CRIWESSSAATHASCEHSVSNCI*NVSYPN
Trigger: ATTTGGGTAGGAAACATTCCAAATGCAGTTTGAAAC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
3UTR CAA 72 bp AATGGACATCTGCTAAATTTCCTCTGTCCATGTCTTTaGGAGACTGTCCTTCCTGATGTAATCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: NGHLLNFLCPCL*ETVLPDVILTE
Trigger: CTCTGTGAGGATTACATCAGGAAGGACAGTCTCCAAAAGACATGGACAGAGGAAATTTAGCAGATGTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGATAGGAGATCCTCCGTaGTGTGATTCTGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVIGDPP*CDSEES
Trigger: ACTTTCTTCAGAATCACATCACGGAGGATCTCCTAT...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTCCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACCTCGTGATCGGGGCTaGGAATGCATTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQPRDRG*ECILLL
Trigger: CAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGG...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAATCTCGGCGAACTCCTaGAAATCGTCTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIISANS*KSSVHF
Trigger: GAAGTGGACAGACGATTTTCAGGAGTTCGCCGAGAT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR TCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTATACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIYWMMS*VRGMSL
Trigger: CAAGCTCATCCCCCTTACTCAGGACATCATCCAGTA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 4 (lower is better)
Translates to: SSAATHASCEHSKPMYTIDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTCTCTCTCCTGCCACTaGAACTACATGGACAATGGA +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNSLSCH*NYMDNG
Trigger: TCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGAGA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACATCTCGGCGAACTCCTaGAAATCGTCTGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNISANS*KSSVGN
Trigger: ATTCCCAACAGACGATTTTCAGGAGTTCGCCGAGAT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579690.5
ENST00000627168.2
CDS-3UTR GCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTCTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTLAGSA*TSIHFK
Trigger: CTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAG...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYLAGSA*TSIHFK
Trigger: CTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATACATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLSVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSSVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATTTTAGCACTCATTCCTaGTGGAAGCACCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHFSTHS*WKHPVY
Trigger: ATACACTGGGTGCTTCCAGCAGGAATGAGTGCTAAA...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTTTAGCACTCATTCCTaGTGGAAGCACCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSFSTHS*WKHPVY
Trigger: ATACACTGGGTGCTTCCAGCAGGAATGAGTGCTAAA...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATGGGAAAGATACTACATaGTGGTATGAATATGAATGC +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHGKDTT*WYEYEC
Trigger: GCATTCATATTCATACCAGCATGTAGTATCTTTCCC...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCATATCCAAGGGCAAGATaGCACACCTGTGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSYPRAR*HTCDGK
Trigger: TTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATA...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTCTCTCAGAACCATCTaGCGTAGGAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSLRTI*RRRFGP
Trigger: AGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTATCTCTCAGAACCATCTaGCGTAGGAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLSLRTI*RRRFGP
Trigger: AGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGA...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSSLED*LDLLAR
Trigger: ACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASSLED*LDLLAR
Trigger: ACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATACAGAACCAGAGTCACTaGCCTCACTTCGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIQNQSH*PHFECH
Trigger: ATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTG...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTACATTTACAGGGAGCGTaGACCATACACCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLHLQGA*TIHPSL
Trigger: AAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATG...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCGTCTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFRLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGACG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCGTCTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSRLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGACG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKRLFHS*VRGHSL
Trigger: CAAGGAATGCCCCCTTACCCAGGAATGGAACAACCT...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCCCAATGTATACAATTTaGAGGGGAAGGCTAAACAAT +
Preference number: 4 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVPMYTI*RGRLNN
Trigger: ATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGG...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATACATGGGTAAAATCTTaGCCCATCAATTACTACCTT +
Preference number: 4 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHTWVKS*PINYYL
Trigger: AAGGTAGTAATTGATGGGCCAAGATTTTACCCATGT...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAAGATTGGATTACGGCTaGCTCCAAAACCAACATGGC +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLRLDYG*LQNQHG
Trigger: GCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGAAGATGCCACACCTGTaGTGGCAAAATACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLKMPHL*WQNTLK
Trigger: TTTCAGAGTATTTTGCCATCACAGGTGTGGCATCTT...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCAAGATGCCACACCTGTaGTGGCAAAATACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFKMPHL*WQNTLK
Trigger: TTTCAGAGTATTTTGCCATCACAGGTGTGGCATCTT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTAAGACAGGATGTATGTaGCCCTCAGAAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTKTGCM*PSERPR
Trigger: TCGTGGTCTTTCTGAGGGTCACATACATCCTGTCTT...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCATCAATTCCATGCCCCTaGGGACTCTTAATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSSIPCP*GLLMVN
Trigger: GTTAACCATTAAGAGTCCTCAGGGGCATGGAATTGA...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTACTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLLAGSA*TSIHFK
Trigger: CTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAG...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGAAGACTGGCTGGATCTaGTTGCACGTCTATCCACTT +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKKTGWI*LHVYPL
Trigger: AAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTT...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTCATCAGAAGAACCACTaGTGCCAGTCTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATHQKNH*CQSHGQ
Trigger: CTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATG...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTTAGCACTCATTCCTaGTGGAAGCACCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLFSTHS*WKHPVY
Trigger: ATACACTGGGTGCTTCCAGCAGGAATGAGTGCTAAA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCTGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTTGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAGCTTGGTCAGTTAACTaGTGGCAACAGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTAWSVN*WQQFLL
Trigger: AAGAAGGAACTGTTGCCAGCAGTTAACTGACCAAGC...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGACCTTTGCCTCCTTGTaGACTTACTACTCGTTTATC +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLTFASL*TYYSFI
Trigger: GATAAACGAGTAGTAAGTGCACAAGGAGGCAAAGGT...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR GCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTACCTTTGCCTCCTTGTaGACTTACTACTCGTTTATC +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFTFASL*TYYSFI
Trigger: GATAAACGAGTAGTAAGTGCACAAGGAGGCAAAGGT...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTCAGAACCAGAGTCACTaGCCTCACTTCGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATQNQSH*PHFECH
Trigger: ATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTG...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTAGCACTCATTCCTGCTaGAAGCACCCAGTGTATAGG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATSTHSC*KHPVYR
Trigger: CCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAATATCATAATCTTCTaGTCGACGCCTTCCCACATC +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFNIIIF*STPSHI
Trigger: GATGTGGGAAGGCGTCGACCAGAAGATTATGATATT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACACGTCTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTRLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGACG...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAALPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFISLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTATAGTTGGTTACCACTaGGAGAACTGGACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSIVGYH*ENWTVN
Trigger: GTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTAT...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCAGAATCACAGCACAGTaGAGTACACGAAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFRITAQ*STRKKP
Trigger: TGGTTTCTTTCGTGTACTCCACTGTGCTGTGATTCT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATAGAATCACAGCACAGTaGAGTACACGAAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHRITAQ*STRKKP
Trigger: TGGTTTCTTTCGTGTACTCCACTGTGCTGTGATTCT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGCCACTGAAACTACATaGACAATGGAAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNATETT*TMEAWR
Trigger: TCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAGCTCCAAAACCAACATaGCTATTCAGTCCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLAPKPT*LFSPFG
Trigger: CCCAAAAGGACTGAATAGCCATGTTGGTTTTGGAGC...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAGCTCCAAAACCAACATaGCTATTCAGTCCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTAPKPT*LFSPFG
Trigger: CCCAAAAGGACTGAATAGCCATGTTGGTTTTGGAGC...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCTTGGAAATACAGATTaGATTACGGCTGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFLGNTD*ITAGSK
Trigger: TTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAAG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCTTTATACTCTGTGGCTaGCTTTCCTTTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRFILCG*LSFCTN
Trigger: GTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAA...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATAGGAGATCCTCCGTaGTGTGATTCTGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLIGDPP*CDSEES
Trigger: ACTTTCTTCAGAATCACATCACGGAGGATCTCCTAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAATAGGAGATCCTCCGTaGTGTGATTCTGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAIGDPP*CDSEES
Trigger: ACTTTCTTCAGAATCACATCACGGAGGATCTCCTAT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTCACGCACGCAAGTTGTaGACATTCCAAGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATHARKL*TFQANV
Trigger: TACATTGGCTTGGAATGTTCACAACTTGCGTGCGTG...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCTCTCTCCTGCCACTaGAACTACATGGACAATGGA +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSLSCH*NYMDNG
Trigger: TCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGAGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCGATGGCAAAATACTCTaGAAAGTCAAACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRDGKIL*KVKHSG
Trigger: ACCTGAATGTTTGACTTTTCAGAGTATTTTGCCATC...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTCAATTCCATGCCCCTaGGGACTCTTAATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTSIPCP*GLLMVN
Trigger: GTTAACCATTAAGAGTCCTCAGGGGCATGGAATTGA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAATCTCGGCGAACTCCTaGAAATCGTCTGTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQISANS*KSSVGN
Trigger: ATTCCCAACAGACGATTTTCAGGAGTTCGCCGAGAT...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579690.5
ENST00000627168.2
CDS-3UTR GCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTSVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTCAGTGTTGTTCCCTTaGTCATCAGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSVLFP*SSEEPL
Trigger: CAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTTTAGCACTCATTCCTaGTGGAAGCACCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKFSTHS*WKHPVY
Trigger: ATACACTGGGTGCTTCCAGCAGGAATGAGTGCTAAA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGTTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR GCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTTCTGCAGTAAGAATATaGAATGGTCCGTCAATCATC +
Preference number: 4 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFSAVRI*NGPSII
Trigger: GATGATTGACGGACCATTGCATATTCTTACTGCAGA...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR GCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGCTATTTGTAGGCGTTTaGCTTAAGCAGTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWLFVGV*LKQFVI
Trigger: AATCACAAACTGCTTAAGGCAAACGCCTACAAATAG...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTCTTATAAGGTTCTCTaGAGGCACTACTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLSYKVL*RHYLID
Trigger: GTCTATCAAGTAGTGCCTCCAGAGAACCTTATAAGA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSSLED*LDLLAR
Trigger: ACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAATACACCCTTCGCTTTaGCAAGAGACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTIHPSL*QETHSH
Trigger: ATGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTAT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAATACACCCTTCGCTTTaGCAAGAGACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSIHPSL*QETHSH
Trigger: ATGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTAT...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAATACACCCTTCGCTTTaGCAAGAGACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAIHPSL*QETHSH
Trigger: ATGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTAT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACAATATCATAATCTTCTaGTCGACGCCTTCCCACATC +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNNIIIF*STPSHI
Trigger: GATGTGGGAAGGCGTCGACCAGAAGATTATGATATT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTATTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLLPRWW*SHVMKF
Trigger: GAATTTCATAACATGGGACCACCACCACCTTGGCAA...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAA +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSLPRW*WSHVMK
Trigger: TTTCATAACATGGGACCACCACCACCTTGGCAAGGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCAACTGTCAGCTGTaGATTTTTGGCGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNFNCQL*IFGGFE
Trigger: CTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTTTTCTATGTTATAGTTaGTTACCACTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSFLCYS*LPLGEL
Trigger: CAGTTCTCCCAGTGGTAACCAACTATAACATAGAAA...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCCTGTACTATGTGATCTaGTACACAGTACAACTGTTG +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFLYYVI*YTVQLL
Trigger: CAACAGTTGTACTGTGTACCAGATCACATAGTACAG...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGCCACTGAAACTACATaGACAATGGAAGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTATETT*TMEAWR
Trigger: TCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKVIANR*AQWLRN
Trigger: GTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAAC...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTVIANR*AQWLRN
Trigger: GTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAAC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCTTTATACTCTGTGGCTaGCTTTCCTTTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFFILCG*LSFCTN
Trigger: GTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAA...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFISLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGAGTCTTGCAAACCCTTaGAATTTTCCACTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKSLANP*NFPLSL
Trigger: CAGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACT...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGATAGGAGATCCTCCGTaGTGTGATTCTGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKIGDPP*CDSEES
Trigger: ACTTTCTTCAGAATCACATCACGGAGGATCTCCTAT...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTGACGCATTTTATGAATaGCCTGATACAAGTCAATAC +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSDAFYE*PDTSQY
Trigger: GTATTGACTTGTATCAGGTCATTCATAAAATGCGTC...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATGACGCATTTTATGAATaGCCTGATACAAGTCAATAC +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHDAFYE*PDTSQY
Trigger: GTATTGACTTGTATCAGGTCATTCATAAAATGCGTC...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGACGCATTTTATGAATaGCCTGATACAAGTCAATAC +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLDAFYE*PDTSQY
Trigger: GTATTGACTTGTATCAGGTCATTCATAAAATGCGTC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTACACAAAATGCCAATaGAGTGACTTACCATGTATC +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLYTKCQ*SDLPCI
Trigger: GATACATGGTAAGTCACTTCATTGGCATTTTGTGTA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGACTTGTATGAGATCCTaGTTTAATGGACATCTGCTA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLTCMRS*FNGHLL
Trigger: TAGCAGATGTCCATTAAATCAGGATCTCATACAAGT...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGGATGATAATTTCTCATaGTTCTTTTCTGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVDDNFS*FFSEPA
Trigger: TGCAGGTTCAGAAAAGAAGCATGAGAAATTATCATC...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGTTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR GCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTTCTTTAAACAATCAGTaGTTCCAAAAGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSSLNNQ*FQKPII
Trigger: GATAATGGGCTTTTGGAAGCACTGATTGTTTAAAGA...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTCTTATGATACTGCATaGTTGGAACAAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKSYDTA*LEQRGS
Trigger: TGACCCCCTTTGTTCCAAGCATGCAGTATCATAAGA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCCCTGAACAAAAAGCATaGTTTTATGTCCATTATTGC +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRPEQKA*FYVHYC
Trigger: GCAATAATGGACATAAAAGCATGCTTTTTGTTCAGG...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGCTATTTGTAGGCGTTTaGCTTAAGCAGTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLLFVGV*LKQFVI
Trigger: AATCACAAACTGCTTAAGGCAAACGCCTACAAATAG...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCTCTATCAAAAACAATTaGAGATATGCCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRSIKNN*RYASSS
Trigger: AGAGCTAGAGGCATATCTCCAATTGTTTTTGATAGA...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATATACACCCTTCGCTTTaGCAAGAGACACATTCTCAT +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYIHPSL*QETHSH
Trigger: ATGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTAT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTTSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNTSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATAATATCATAATCTTCTaGTCGACGCCTTCCCACATC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYNIIIF*STPSHI
Trigger: GATGTGGGAAGGCGTCGACCAGAAGATTATGATATT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAAATATCATAATCTTCTaGTCGACGCCTTCCCACATC +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFINIIIF*STPSHI
Trigger: GATGTGGGAAGGCGTCGACCAGAAGATTATGATATT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTAATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLIVRMV*RLFHSW
Trigger: CCAGGAATGGAACAACCTCCACACCATCCTTACTAT...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCCAATGTATACAATTTaGAGGGGAAGGCTAAACAAT +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFPMYTI*RGRLNN
Trigger: ATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTCCAATGTATACAATTTaGAGGGGAAGGCTAAACAAT +
Preference number: 4 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSPMYTI*RGRLNN
Trigger: ATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGG...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAAAACTACATGGACAATaGAAGCTTGGAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTKLHGQ*KLGDNG
Trigger: GCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCAGAACCCCATTTCCTTaGAAATACAGATTGGATTAC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFRTPFP*KYRLDY
Trigger: GTAATCCAATCTGTATTTCCAAGGAAATGGGGTTCT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGAGTAAGAATATGCAATaGTCCGTCAATCATCATACT +
Preference number: 4 (lower is better)
Translates to: PKQSAVRICNGPSIIILWSKNMQ*SVNHHT
Trigger: AGTATGATGATTGACGGACCATTGCATATTCTTACT...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAAAACTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLKLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGTTT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579690.5
ENST00000627168.2
CDS-3UTR TCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQVIANR*AQWLRN
Trigger: GTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAAC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCATTTATACTCTGTGGCTaGCTTTCCTTTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSFILCG*LSFCTN
Trigger: GTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAA...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTATAGGAGATCCTCCGTaGTGTGATTCTGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATIGDPP*CDSEES
Trigger: ACTTTCTTCAGAATCACATCACGGAGGATCTCCTAT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTCAGCATTATTTTTACTaGACCGTGTGCAACTACATG +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTQHYFY*TVCNYM
Trigger: CATGTAGTTGCACACGGTTCAGTAAAAATAATGCTG...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGATGATAATTTCTCATaGTTCTTTTCTGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLDDNFS*FFSEPA
Trigger: TGCAGGTTCAGAAAAGAAGCATGAGAAATTATCATC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATGATGATAATTTCTCATaGTTCTTTTCTGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHDDNFS*FFSEPA
Trigger: TGCAGGTTCAGAAAAGAAGCATGAGAAATTATCATC...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTATGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATGGACTGTTCCATTCTaGCCCAATAAAAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIWTVPF*PNKSVN
Trigger: ATTGACACTTTTATTGGGGCAGAATGGAACAGTCCA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGGGAAAGATACTACATaGTGGTATGAATATGAATGC +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAGKDTT*WYEYEC
Trigger: GCATTCATATTCATACCAGCATGTAGTATCTTTCCC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTCCTCTCTACCACAATaGAGATTTAAAACAAATCCT +
Preference number: 4 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSSLPQ*RFKTNP
Trigger: AGGATTTGTTTTAAATCTGCATTGTGGTAGAGAGGA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTTTAGAAAAATCCTCTaGTTAAGCCTGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLFRKIL*LSLKEM
Trigger: CATTTCCTTCAGGCTTAAGCAGAGGATTTTTCTAAA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGTATTCCAAAACAGTCTaGAGTAAGAATATGCAATGG +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLYSKTV*SKNMQW
Trigger: CCATTGCATATTCTTACTGCAGACTGTTTTGGAATA...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CCA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTCTTATAAGGTTCTCTaGAGGCACTACTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKSYKVL*RHYLID
Trigger: GTCTATCAAGTAGTGCCTCCAGAGAACCTTATAAGA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATCTTATAAGGTTCTCTaGAGGCACTACTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFISYKVL*RHYLID
Trigger: GTCTATCAAGTAGTGCCTCCAGAGAACCTTATAAGA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKTSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAATGATACTGCATGCTTaGAACAAAGGGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIMILHA*NKGGHN
Trigger: ATTATGACCCCCTTTGTTCCAAGCATGCAGTATCAT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATTCAACTGTCAGCTGTaGATTTTTGGCGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQFNCQL*IFGGFE
Trigger: CTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTTCAACTGTCAGCTGTaGATTTTTGGCGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATFNCQL*IFGGFE
Trigger: CTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACACCAATGTATACAATTTaGAGGGGAAGGCTAAACAAT +
Preference number: 4 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTPMYTI*RGRLNN
Trigger: ATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGG...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTAATAGTTGGTTACCACTaGGAGAACTGGACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLIVGYH*ENWTVN
Trigger: GTTAACTGTCCAGTTCTCCCAGTGGTAACCAACTAT...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGCTGTACTATGTGATCTaGTACACAGTACAACTGTTG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKLYYVI*YTVQLL
Trigger: CAACAGTTGTACTGTGTACCAGATCACATAGTACAG...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCACCAAATAAAAACATaGGTAAAATCTTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNHQIKT*VKSWPI
Trigger: GATGGGCCAAGATTTTACCCATGTTTTTATTTGGTG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATAAACTACATGGACAATaGAAGCTTGGAGATAATGGC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYKLHGQ*KLGDNG
Trigger: GCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATGTTTCAAACTGCATTTaGAATGTTTCCTACCCAAAT +
Preference number: 4 (lower is better)
Translates to: EAATTLPYSQTIILQYLHVSNCI*NVSYPN
Trigger: ATTTGGGTAGGAAACATTCCAAATGCAGTTTGAAAC...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGAGTAAGAATATGCAATaGTCCGTCAATCATCATACT +
Preference number: 4 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLSKNMQ*SVNHHT
Trigger: AGTATGATGATTGACGGACCATTGCATATTCTTACT...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR TCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATTTATACTCTGTGGCTaGCTTTCCTTTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIFILCG*LSFCTN
Trigger: GTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGACGCATTTTATGAATaGCCTGATACAAGTCAATAC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTDAFYE*PDTSQY
Trigger: GTATTGACTTGTATCAGGTCATTCATAAAATGCGTC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGGATTTTTGGCGGATTTaGGTTTTTCCAGTTCTTATG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKDFWRI*VFPVLM
Trigger: CATAAGAACTGGAAAAACTCAAATCCGCCAAAAATC...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGAATTTTCACTCCTTTaGACTATTACTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIEFSLL*TITPAN
Trigger: ATTGGCTGGAGTAATAGTTCAAAGGAGTGAAAATTC...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATACTTGTATGAGATCCTaGTTTAATGGACATCTGCTA +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYTCMRS*FNGHLL
Trigger: TAGCAGATGTCCATTAAATCAGGATCTCATACAAGT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR TCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAGATGGCAAAATACTCTaGAAAGTCAAACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLDGKIL*KVKHSG
Trigger: ACCTGAATGTTTGACTTTTCAGAGTATTTTGCCATC...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGATGATAATTTCTCATaGTTCTTTTCTGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNDDNFS*FFSEPA
Trigger: TGCAGGTTCAGAAAAGAAGCATGAGAAATTATCATC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCCTTTAAGAGTAAAGTaGCTGTGTTGTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYPLRVK*LCCSFQ
Trigger: CTGAAAAGAACAACACAGGCACTTTACTCTTAAAGG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGCCTTTAAGAGTAAAGTaGCTGTGTTGTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKPLRVK*LCCSFQ
Trigger: CTGAAAAGAACAACACAGGCACTTTACTCTTAAAGG...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCATCCTCTCTACCACAATaGAGATTTAAAACAAATCCT +
Preference number: 4 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAASSLPQ*RFKTNP
Trigger: AGGATTTGTTTTAAATCTGCATTGTGGTAGAGAGGA...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTTAGAAAAATCCTCTaGTTAAGCCTGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLFRKIL*LSLKEM
Trigger: CATTTCCTTCAGGCTTAAGCAGAGGATTTTTCTAAA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACATCTTGTTCACTCTCTaGATTATACAGTTCATCATC +
Preference number: 4 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNILFTL*IIQFII
Trigger: GATGATGAACTGTATAATCCAGAGAGTGAACAAGAT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCTTATAAGGTTCTCTaGAGGCACTACTTGATAGAC +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSYKVL*RHYLID
Trigger: GTCTATCAAGTAGTGCCTCCAGAGAACCTTATAAGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQTSDLY*FMFIPR
Trigger: CCTTGGAATGAACATAAACCAGTAAAGATCGGACGT...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTAACAGAAGACAAAGCTaGGTTCCACATTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATNRRQS*VPHSSS
Trigger: TGAACTTGAATGTGGAACCCAGCTTTGTCTTCTGTT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAACATGGGTAAAATCTTaGCCCATCAATTACTACCTT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFITWVKS*PINYYL
Trigger: AAGGTAGTAATTGATGGGCCAAGATTTTACCCATGT...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTCACCAAATAAAAACATaGGTAAAATCTTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTHQIKT*VKSWPI
Trigger: GATGGGCCAAGATTTTACCCATGTTTTTATTTGGTG...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATAGAACCCCATTTCCTTaGAAATACAGATTGGATTAC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYRTPFP*KYRLDY
Trigger: GTAATCCAATCTGTATTTCCAAGGAAATGGGGTTCT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTAAACTGTCCACTTCCTaGTATCGTGGATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATKLSTS*YRGSFK
Trigger: TTTAAAGGATCCACGATACCAGGAAGTGGACAGTTT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579690.5
ENST00000627168.2
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTTTATACTCTGTGGCTaGCTTTCCTTTTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATFILCG*LSFCTN
Trigger: GTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR TCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGAATTTTCACTCCTTTaGACTATTACTCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATEFSLL*TITPAN
Trigger: ATTGGCTGGAGTAATAGTTCAAAGGAGTGAAAATTC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATTTATCTCTGTATCTTaGTTCATGTGGTACTGGATG +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQFISVS*FMWYWM
Trigger: CATCCAGTACCACATGAAGCAAGATACAGAGATAAA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTCTTTAAACAATCAGTaGTTCCAAAAGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSLNNQ*FQKPII
Trigger: GATAATGGGCTTTTGGAAGCACTGATTGTTTAAAGA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTTCTTTAAACAATCAGTaGTTCCAAAAGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTSLNNQ*FQKPII
Trigger: GATAATGGGCTTTTGGAAGCACTGATTGTTTAAAGA...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCCTGAACAAAAAGCATaGTTTTATGTCCATTATTGC +
Preference number: 4 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYPEQKA*FYVHYC
Trigger: GCAATAATGGACATAAAAGCATGCTTTTTGTTCAGG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATATCTATCAAAAACAATTaGAGATATGCCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFISIKNN*RYASSS
Trigger: AGAGCTAGAGGCATATCTCCAATTGTTTTTGATAGA...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTACCAATGTATACAATTTaGAGGGGAAGGCTAAACAAT +
Preference number: 4 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLPMYTI*RGRLNN
Trigger: ATTGTTTAGCCTTCCCCTCCAAATTGTATACATTGG...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTTTCTATGTTATAGTTaGTTACCACTGGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATFLCYS*LPLGEL
Trigger: CAGTTCTCCCAGTGGTAACCAACTATAACATAGAAA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CCA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAACAGAATACTATGCATaGATTGCTTATACTCTAAGG +
Preference number: 4 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLTEYYA*IAYTLR
Trigger: CCTTAGAGTATAAGCAATCCATGCATAGTATTCTGT...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR GCA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCTTTAAACAATCAGTaGTTCCAAAAGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSLNNQ*FQKPII
Trigger: GATAATGGGCTTTTGGAAGCACTGATTGTTTAAAGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR GCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTCTTTAAACAATCAGTaGTTCCAAAAGCCCATTATC +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATSLNNQ*FQKPII
Trigger: GATAATGGGCTTTTGGAAGCACTGATTGTTTAAAGA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CCA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACAGAATACTATGCATaGATTGCTTATACTCTAAGG +
Preference number: 4 (lower is better)
Translates to: FNICILDSSIIFTEPCATTEYYA*IAYTLR
Trigger: CCTTAGAGTATAAGCAATCCATGCATAGTATTCTGT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS GCA 90 bp GCGCCGCAGCCGCGGCAGAAGCACGGGCCCGTCCGTCAGTCCGTCTaGCCGGATACGCGCGTCGCACTTGGCCTCTTAACACTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: APQPRQKHGPVRQSV*PDTRVALGLLTLSL
Trigger: AAGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTATCCGGGCAGACGGACTGACGGACGGGCCCGTGCTTCTGCCGCGGCTGCGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000510746.1
ENST00000613637.3
ENST00000615500.4
ENST00000625493.1
CDS CCA 90 bp AGGGCTCAGACTCGGGCTAGGTATGGGGGAGGGAAGGGAAACAGATaGCGACGGCGGGCGGCGCTAAAATGGAGCCTGCTTCCTGCGCGA +
Preference number: 5 (lower is better)
Translates to: RAQTRARYGGGKGNR*RRRAALKWSLLPAR
Trigger: TCGCGCAGGAAGCAGGCTCCATTTTAGCGCCGCCCGCCGTCGCCATCTGTTTCCCTTCCCTCCCCCATACCTAGCCCGAGTCTGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000613637.3
ENST00000615500.4
CDS CCA 90 bp CGGGCCCGTCCGTCAGTCCGTCTGCCCGGATACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCTTCTCGACTCTTCCCGCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: RARPSVRLPGYARRT*PLNTQPSRLFPLFP
Trigger: GGGAAAAAGCGGGAAGAGTCGAGAAGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTATCCGGGCAGACGGACTGACGGACGGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000510746.1
ENST00000613637.3
ENST00000615500.4
ENST00000625493.1
CDS TCA 90 bp CCTTCCCACATCCCGGACTGGTTCTCGACGGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCATTCTTCTCTTGTGACGCATTTTATG +
Preference number: 5 (lower is better)
Translates to: PSHIPDWFSTGWTSS*SGLRMHSSLVTHFM
Trigger: CATAAAATGCGTCACAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGGACGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000506175.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627135.1
ENST00000627168.2
CDS TCA 90 bp GCTCTCGTTCCCGGTCTCTTTCACGGGGTCTACTTCTCCGGCCACTaGCAACAGCTTGTGTGCGACGAAGGAAATCATCCACCCTCATAT +
Preference number: 5 (lower is better)
Translates to: ALVPGLFHGVYFSGH*QQLVCDEGNHPPSY
Trigger: ATATGAGGGTGGATGATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTAGACCCCGTGAAAGAGACCGGGAACGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: CRIWESSSAATHASCEHSVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CCA 90 bp ATGAGCTTGAGGAGGTGGAGCATGGTGCTGATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGGGTAAGGGGGCATTCCTTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: MSLRRWSMVLIVRMV*RLFHSWVRGHSLPR
Trigger: CCTTGGCAAGGAATGCCCCCTTACCCAGGAATGGAACAACCTCCACACCATCCTTACTATCAGCACCATGCTCCACCTCCTCAAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGTGAGGTCACTTGAGGTCGAGTTTGAGACCAGCCTGGCCAGTAAAGTGCCTGTGTaGTTCTTTTCAGGCCAATAT +
Preference number: 5 (lower is better)
Translates to: RRLRQVRSLEVEFETSLASKVPV*FFSGQY
Trigger: ATATTGGCCTGAAAAGAACAACACAGGCACTTTACT...GGCCAGGCTGGTCTCAAACTCGACCTCAAGTGACCTCACCTGCCTCAGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: CRIWESSSAATHASCEHSATDNS*CATKEI
Trigger: GATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PKQSAVRICNGPSIIILWVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp TCTCTCCTGCCACTGAAACTACATGGACAATGGAAGCTTGGAGATAATGGCCATCACTTGAGGTCGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SLLPLKLHGQWKLGDNGHHLRSS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCGACCTCAAGTG...ATGGCCATTATCTCCAAGCTTCCATTGTCCATGTAGTTTCAGTGGCAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCCACTTGAGGTCGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVHLRSS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCGACCTCAAGTG...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTIRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTIATDNS*CATKEI
Trigger: GATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGC...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTACAGTCACCCTTACGTaGGGTCAGGGAACTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTITVTLT*GQGTLA
Trigger: AGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS TCA 90 bp TCGTTTATCTCTGTATCTTGCTTCATGTGGTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTGAGGAGGTGGAGCATGGTGCTGATA +
Preference number: 5 (lower is better)
Translates to: SFISVSCFMWYWMMS*VRGMSLRRWSMVLI
Trigger: TATCAGCACCATGCTCCACCTCCTCAAGCTCATCCCCCTTACTCAGGACATCATCCAGTACCACATGAAGCAAGATACAGAGATAAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS-3UTR CAA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTTCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTACTGGCTGGATCTGCTaGCACGTCTATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTITGWIC*HVYPLQ
Trigger: TTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGTAAGGGGGCATTCCTaGCCAAGGTGGTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNVRGHS*PRWWWS
Trigger: GGACCACCACCACCTTGGCAAGGAATGCCCCCTTAC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS GCA 90 bp TTCTTCAGAGTTCACTTCTTCCTTAGAAGACTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAGCCCAATTCTCTCAGAACCATCTGG +
Preference number: 5 (lower is better)
Translates to: FFRVHFFLRRLAGSA*TSIHFKPNSLRTIW
Trigger: CCAGATGGTTCTGAGAGAATTGGGCTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGAAGTGAACTCTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS GCA 90 bp CCTCATTCTCAGTGTTGTTCCCTTGCTCATCAGAAGAACCACTGCTaGCAGTCTCATGGTCAGAGCCATATTCTTCAGAGTTCACTTCTT +
Preference number: 5 (lower is better)
Translates to: PHSQCCSLAHQKNHC*QSHGQSHILQSSLL
Trigger: AAGAAGTGAACTCTGAAGAATATGGCTCTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAGAATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CCA 90 bp TGGTCAGAGCCATATTCTTCAGAGTTCACTTCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGTCTATCCACTTCAAGCCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: WSEPYSSEFTSSLED*LDLLARLSTSSPIL
Trigger: GAGAATTGGGCTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGAAGTGAACTCTGAAGAATATGGCTCTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTTCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATTCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTCATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTIHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNGDSQS*VSFCCY
Trigger: ATAACAGCAGAAAGAAACCAAGGATTGACTATCCCC...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGTAAGGGGGATGAGCTaGAGGAGGTGGAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAVRGMS*RRWSMV
Trigger: CACCATGCTCCACCTCCTCAAGCTCATCCCCCTTAC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSATDNS*CATKEI
Trigger: GATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGC...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTACTTGGGGACTAAACTaGAGCCAGTTCTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTITWGLN*SQFFPV
Trigger: CACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGT...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS TCA 90 bp CGTCCGATCTTTACTGGTTTATGTTCATTCCAAGGATTGGTGAGATaGGCCGACTTAGTGAAGGGTAATTCACGCCTGCAAATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RPIFTGLCSFQGLVR*ADLVKGNSRLQIQS
Trigger: TGACTGGATTTGCAGGCGTGAATTACCCTTCACTAAGTCGGCTCATCTCACCAATCCTTGGAATGAACATAAACCAGTAAAGATCGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000506175.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627135.1
ENST00000627168.2
CDS-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATT +
Preference number: 5 (lower is better)
Translates to: CRIWESSSAATHASCEHSEGFCR*VSVDSI
Trigger: AATGGAATCTACTGATACCAAACGACAAAAGCCTTC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATT +
Preference number: 5 (lower is better)
Translates to: SNVEYGNRLPLPRTQVVNEGFCR*VSVDSI
Trigger: AATGGAATCTACTGATACCAAACGACAAAAGCCTTC...GTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCATCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTACTGGCTGGATCTGCTaGCACGTCTATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSTGWIC*HVYPLQ
Trigger: TTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGT...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTCCTCATTCTCAGTGTaGTTCCCTTGCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTISSFSV*FPCSSE
Trigger: TTCTGATGAGCAAGGGAACAACACTGAGAATGAGGA...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SKTVCSKNMQWSVNHHTLRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...CAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: CRIWESSSAATHASCEHSVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLATDNS*CATKEI
Trigger: GATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGC...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFATDNS*CATKEI
Trigger: GATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGC...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTISVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGAGTTCCCTCACACCTTaGCCTCCTTGTGCACTTACT +
Preference number: 5 (lower is better)
Translates to: PKQSAVRICNGPSIIILWSSLTP*PPCALT
Trigger: AGTAAGTGCACAAGGAGGCAAAGGTGTGAGGGAACT...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS GCA 90 bp GTCTCTGGTGAAACTCAGGGGGATAGTCAATCCTTGGTTTCTTTCTaGTGTTATGAATATCATAATCTTCTGGTCGACGCCTTCCCACAT +
Preference number: 5 (lower is better)
Translates to: VSGETQGDSQSLVSF*CYEYHNLLVDAFPH
Trigger: ATGTGGGAAGGCGTCGACCAGAAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATCCCCCTGAGTTTCACCAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCACTGGCTGGATCTGCTaGCACGTCTATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFTGWIC*HVYPLQ
Trigger: TTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGT...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTCTCAGTGTTGTTCCCTaGCTCATCAGAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSLSVVP*LIRRTT
Trigger: AGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAG...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCCATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TGTAGAATATGGGAATCGTCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGAACCCCATTTCCTaGGAAATACAGATTGGATTA +
Preference number: 5 (lower is better)
Translates to: CRIWESSSAATHASCEHSKNPIS*EIQIGL
Trigger: TAATCCAATCTGTATTTCCAAGGAAATGGGGTTCTT...GGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGCACACCTTTGCCTCCTaGTGCACTTACTACTCGTTT +
Preference number: 5 (lower is better)
Translates to: PKQSAVRICNGPSIIILWHTFAS*CTYYSF
Trigger: AAACGAGTAGTAAGTGCACAAGGAGGCAAAGGTGTG...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTAGTTCCCTCACACCTTaGCCTCCTTGTGCACTTACT +
Preference number: 5 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFSSLTP*PPCALT
Trigger: AGTAAGTGCACAAGGAGGCAAAGGTGTGAGGGAACT...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATSGVGD*ALLSGS
Trigger: GGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAACTGGCTGGATCTGCTaGCACGTCTATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAATGWIC*HVYPLQ
Trigger: TTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAACTGGCTGGATCTGCTaGCACGTCTATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLTGWIC*HVYPLQ
Trigger: TTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCCTCAGTGTTGTTCCCTaGCTCATCAGAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFLSVVP*LIRRTT
Trigger: AGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAG...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATCTCAGTGTTGTTCCCTaGCTCATCAGAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHLSVVP*LIRRTT
Trigger: AGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAG...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCTCCTCATTCTCAGTGTaGTTCCCTTGCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRSSFSV*FPCSSE
Trigger: TTCTGATGAGCAAGGGAACAACACTGAGAATGAGGA...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCCATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTCATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATCATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCTTCCGCTGCCACGCACGCAAGTTGTGAACATTCCAAGCCAATGTATACAATTGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: SSAATHASCEHSKPMYTIVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...AATTGTATACATTGGCTTGGAATGTTCACAACTTGCGTGCGTGGCAGCGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTTGGGGACTAAACTaGAGCCAGTTCTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHTWGLN*SQFFPV
Trigger: CACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGT...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTCACACCTTTGCCTCCTaGTGCACTTACTACTCGTTT +
Preference number: 5 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFHTFAS*CTYYSF
Trigger: AAACGAGTAGTAAGTGCACAAGGAGGCAAAGGTGTG...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS CCA 90 bp TTGCTAACAGATGAGCTCAGTGGCTTAGAAACCAGTTGTCTAGAATaGACAGAAGGCTTTTGTCGTTTGGTATCAGTAGATTCCATTCGA +
Preference number: 5 (lower is better)
Translates to: LLTDELSGLETSCLE*TEGFCRLVSVDSIR
Trigger: TCGAATGGAATCTACTGATACCAAACGACAAAAGCCTTCTGTCCATTCTAGACAACTGGTTTCTAAGCCACTGAGCTCATCTGTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000505251.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000629100.1
CDS CCA 90 bp TCCACATTCAAGTTCAATTTCCTGTCCATCACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGGATTGGTGAGATGAGCCGACTTAGT +
Preference number: 5 (lower is better)
Translates to: STFKFNFLSITSDLY*FMFIPRIGEMSRLS
Trigger: ACTAAGTCGGCTCATCTCACCAATCCTTGGAATGAACATAAACCAGTAAAGATCGGACGTGATGGACAGGAAATTGAACTTGAATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000506175.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627135.1
ENST00000627168.2
CDS-3UTR CAA 90 bp TTGGAAATACAGATTGGATTACGGCTGGCTCCAAAACCAACATGGCTATTCAGTATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LEIQIGLRLAPKPTWLFSMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...ACTGAATAGCCATGTTGGTTTTGGAGCCAGCCGTAATCCAATCTGTATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATCTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHLWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCACTCAGTGTTGTTCCCTaGCTCATCAGAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSLSVVP*LIRRTT
Trigger: AGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAG...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GCACAGTGGAGTACACGAAAGAAACCATGTCTTCTCACAGTGACAAAAGCTGTCGACACATTCTCATGGTaGTTACTCTTTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: AQWSTRKKPCLLTVTKAVDTFSW*LLFMRK
Trigger: TTTCCTCATAAAGAGTAACAACCATGAGAATGTGTC...GACAGCTTTTGTCACTGTGAGAAGACATGGTTTCTTTCGTGTACTCCACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATRMVWR*FHSWVR
Trigger: CCTTACCCAGGAATGGAACAACCTCCACACCATCCT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp GAGGCTGCTACAACACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EAATTLPYSQTIILQYLHSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...ATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGTGTTGTAGCAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCACTCTGTCCATGTCTTTaGGAGACTGTCCTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSLCPCL*ETVLPD
Trigger: ATCAGGAAGGACAGTCTCCAAAAGACATGGACAGAG...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTAACAGTCACCCTTACGTaGGGTCAGGGAACTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLTVTLT*GQGTLA
Trigger: AGCTAGAGTTCCCTGACCCAACGTAAGGGTGACTGT...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS TCA 90 bp GTGAAATCCTCAATGAAGCCACAAACTAGTCCATGCAGCTTGATTTaGGGATTTTCTCTTTCTTCTTTACCGCAGGACAAACTTTTGACG +
Preference number: 5 (lower is better)
Translates to: VKSSMKPQTSPCSLI*GFSLSSLPQDKLLT
Trigger: CGTCAAAAGTTTGTCCTGCGGTAAAGAAGAAAGAGAAAATCCTCAAATCAAGCTGCATGGACTAGTTTGTGGCTTCATTGAGGATTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTACTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLLWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCACTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAALWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCACTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSLWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNLWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCTCAGTGTTGTTCCCTaGCTCATCAGAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYLSVVP*LIRRTT
Trigger: AGTGGTTCTTCTGATGAGCAAGGGAACAACACTGAG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCCTCATTCTCAGTGTaGTTCCCTTGCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSSFSV*FPCSSE
Trigger: TTCTGATGAGCAAGGGAACAACACTGAGAATGAGGA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGCAGACAGCTGTTTGAGTTTACTGGTTaGATCTTTTCGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: KGGHNKSFYTMNFIGRQLFEFTG*IFSDST
Trigger: CGTGCTGTCCGAAAAGATCAAACCAGTAAACTCAAA...CAGCTGTCTGCCTATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTTATACAAAACAGTAGCAATGTAGAATATGGGAATCGTCTTCCGCTGCCACGCAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: FIQNSSNVEYGNRLPLPRKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...GCGTGGCAGCGGAAGACGATTCCCATATTCTACATTGCTACTGTTTTGTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CCAAAACAGTCTGCAGTAAGAATATGCAATGGTCCGTCAATCATCATACTCTGGGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: PKQSAVRICNGPSIIILWVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...CCAGAGTATGATGATTGACGGACCATTGCATATTCTTACTGCAGACTGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AGTGTCAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: SVNSTVSCGFLADLSFSSANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...ACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTCCTTGGAAATACAGATaGGATTACGGCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTPWKYR*DYGWLQ
Trigger: TTGGAGCCAGCCGTAATCCAATCTGTATTTCCAAGG...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACACCTACTATAAGGAACTaGGGGACTAAACTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTPTIRN*GTKLEP
Trigger: TGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGG...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACCCTACTATAAGGAACTaGGGGACTAAACTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNPTIRN*GTKLEP
Trigger: TGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGG...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATCTCTGGAGGCACTACTaGATAGACGAATTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYLWRHY*IDEFSD
Trigger: ATCGGAAAATTCGTCTATCAAGTAGTGCCTCCAGAG...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTCCTCATTCTCAGTGTaGTTCCCTTGCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSSFSV*FPCSSE
Trigger: TTCTGATGAGCAAGGGAACAACACTGAGAATGAGGA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTTGAGTTTACTGGTTaGATCTTTTCGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNFEFTG*IFSDST
Trigger: CGTGCTGTCCGAAAAGATCAAACCAGTAAACTCAAA...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTACATACACCCTTCGCTTaGGCAAGAGACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLHTPFA*ARDTFS
Trigger: TGAGAATGTGTCTCTTGCCAAAGCGAAGGGTGTATG...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAGDSQS*VSFCCY
Trigger: ATAACAGCAGAAAGAAACCAAGGATTGACTATCCCC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CCTAGGTACTACCTAAAAGGAGTTCTATTTGTAGGCGTTTGCCTTAAGCAGTTTGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: PRYYLKGVLFVGVCLKQFVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...AAACTGCTTAAGGCAAACGCCTACAAATAGAACTCCTTTTAGGTAGTACCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS-3UTR CAA 90 bp ATTCCTACTATAAGGAACTTGGGGACTAAACTTGAGCCAGTTCTTTCCTGTGTGGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: IPTIRNLGTKLEPVLSCVGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...CACACAGGAAAGAACTGGCTCAAGTTTAGTCCCCAAGTTCCTTATAGTAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATCAAAGTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSIIFTEPCATTCRNTSKSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...CTTTGATGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACACTACCTTTCTAATCTaGGGCAAGTTTACTAGCCTC +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNTTFLI*GKFTSL
Trigger: GAGGCTAGTAAACTTGCCCAAGATTAGAAAGGTAGT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTCTGTCCATGTCTTTaGGAGACTGTCCTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQLCPCL*ETVLPD
Trigger: ATCAGGAAGGACAGTCTCCAAAAGACATGGACAGAG...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp GAATGTAGATATATCCAAGGGCAAGATGCCACACCTGTGATGGCAAAATACTCTTGTTTCAAACTGCATTaGGAATGTTTCCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: ECRYIQGQDATPVMAKYSCFKLH*ECFLPK
Trigger: TTTGGGTAGGAAACATTCCAAATGCAGTTTGAAACA...AGAGTATTTTGCCATCACAGGTGTGGCATCTTGCCCTTGGATATATCTACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATT +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAEGFCR*VSVDSI
Trigger: AATGGAATCTACTGATACCAAACGACAAAAGCCTTC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATT +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTEGFCR*VSVDSI
Trigger: AATGGAATCTACTGATACCAAACGACAAAAGCCTTC...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAATCCTCATTCTCAGTGTaGTTCCCTTGCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQSSFSV*FPCSSE
Trigger: TTCTGATGAGCAAGGGAACAACACTGAGAATGAGGA...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCGACACATTCTCATGGTaGTTACTCTTTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: LHAWNKGGHNKSFYTMNFDTFSW*LLFMRK
Trigger: TTTCCTCATAAAGAGTAACAACCATGAGAATGTGTC...GAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACTTCATAGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: HAWNKGGHNKSFYTMNFIGDSQS*VSFCCY
Trigger: ATAACAGCAGAAAGAAACCAAGGATTGACTATCCCC...TATGAAGTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTAT +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTGDSQS*VSFCCY
Trigger: ATAACAGCAGAAAGAAACCAAGGATTGACTATCCCC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGCTGTGGATTTTGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: LFHSAPIKVSIQLSAVDFGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...AAAATCCACAGCTGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGTCAGCTGTGGATTTTaGGCGGATTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQVSCGF*ADLSFS
Trigger: GGAAAAACTCAAATCCGCCAAAAATCCACAGCTGAC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTCAGTATCTACATTCTaGGACTGTTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATSVSTF*DCSILP
Trigger: GGGCAGAATGGAACAGTCCAAGAATGTAGATACTGA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CAATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTAAGTAAAGTGCCTGTGTaGTTCTTTTCAGGCCAATAT +
Preference number: 5 (lower is better)
Translates to: QFNCQLWIFGGFEFFQFLSKVPV*FFSGQY
Trigger: ATATTGGCCTGAAAAGAACAACACAGGCACTTTACT...TAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACAACATGGGTAAAATCTaGGCCCATCAATTACTACCT +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNNMGKI*AHQLLP
Trigger: AGGTAGTAATTGATGGGCCAAGATTTTACCCATGTT...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS TCA 90 bp GCAGGACAAACTTTTGACGAATCATATTCCTCCATCATGTTATTCTaGTACATGTGCCTATTATCAGTCCAAAGAACGTTTCTAACCTTC +
Preference number: 5 (lower is better)
Translates to: AGQTFDESYSSIMLF*YMCLLSVQRTFLTF
Trigger: GAAGGTTAGAAACGTTCTTTGGACTGATAATAGGCACATGTATCAGAATAACATGATGGAGGAATATGATTCGTCAAAAGTTTGTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTATGGACAGAAGGCTTTaGTCGTTTGGTATCAGTAGA +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATMDRRL*SFGISR
Trigger: TCTACTGATACCAAACGACAAAAGCCTTCTGTCCAT...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTATTTGAGTTTACTGGTTaGATCTTTTCGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLFEFTG*IFSDST
Trigger: CGTGCTGTCCGAAAAGATCAAACCAGTAAACTCAAA...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTTTTGAGTTTACTGGTTaGATCTTTTCGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATFEFTG*IFSDST
Trigger: CGTGCTGTCCGAAAAGATCAAACCAGTAAACTCAAA...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGTCAGACACATTCTCATGGTaGTTACTCTTTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: YILGLFHSAPIKVSIQLSDTFSW*LLFMRK
Trigger: TTTCCTCATAAAGAGTAACAACCATGAGAATGTGTC...TGACAGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp CACTGGGAGAACTGGACAGTTAACTTAAAATACAGAACTAATACAAGAGGGTTAAAGTCTTGCAAACCCTaGAAATTTTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: HWENWTVNLKYRTNTRGLKSCKP*KFSTLS
Trigger: AGAGAGAGTGGAAAATTTCAAGGGTTTGCAAGACTT...TAACCCTCTTGTATTAGTTCTGTATTTTAAGTTAACTGTCCAGTTCTCCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp AATTCAACTGTCAGCTGTGGATTTTTGGCGGATTTGAGTTTTTCCAGTTCTTATGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGAT +
Preference number: 5 (lower is better)
Translates to: NSTVSCGFLADLSFSSSYVYLCI*LHVVLD
Trigger: ATCCAGTACCACATGAAGCAAGATACAGAGATAAAC...ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCCACAGCTGACAGTTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTGCCATACAGTCAAACCATCATACTTCAATATTTGCATACTCGATAGCAGCAGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: TAIQSNHHTSIFAYSIAAGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...TGCTGCTATCGAGTATGCAAATATTGAAGTATGATGGTTTGACTGTATGGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ATACTGCATGCTTGGAACAAAGGGGGTCATAATAAATCCTTCTACACAATGAACGGATTTTTGGCGGATTaGAGTTTTTCCAGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: ILHAWNKGGHNKSFYTMNGFLAD*SFSSSY
Trigger: ATAAGAACTGGAAAAACTCAAATCCGCCAAAAATCC...GTTCATTGTGTAGAAGGATTTATTATGACCCCCTTTGTTCCAAGCATGCAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGCCAATGTATACAATTaGGAGGGGAAGGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQANVYN*EGKAKQ
Trigger: TTGTTTAGCCTTCCCCTCCAAATTGTATACATTGGC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTAACTACCTTTCTAATCTaGGGCAAGTTTACTAGCCTC +
Preference number: 5 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLTTFLI*GKFTSL
Trigger: GAGGCTAGTAAACTTGCCCAAGATTAGAAAGGTAGT...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACAAAGAACCCCATTTCCTaGGAAATACAGATTGGATTA +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTKNPIS*EIQIGL
Trigger: TAATCCAATCTGTATTTCCAAGGAAATGGGGTTCTT...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp CTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTACATGTAGAAACACATGTTTCAAACTGCATTaGGAATGTTTCCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: LDSSIIFTEPCATTCRNTCFKLH*ECFLPK
Trigger: TTTGGGTAGGAAACATTCCAAATGCAGTTTGAAACA...TGTGTTTCTACATGTAGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAACTGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATT +
Preference number: 5 (lower is better)
Translates to: FNICILDSSIIFTEPCATEGFCR*VSVDSI
Trigger: AATGGAATCTACTGATACCAAACGACAAAAGCCTTC...AGTTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp TATCTACATTCTTGGACTGTTCCATTCTGCCCCAATAAAAGTGTCAATTCAACTGACACATTCTCATGGTaGTTACTCTTTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: YLHSWTVPFCPNKSVNSTDTFSW*LLFMRK
Trigger: TTTCCTCATAAAGAGTAACAACCATGAGAATGTGTC...AGTTGAATTGACACTTTTATTGGGGCAGAATGGAACAGTCCAAGAATGTAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAGACACATTCTCATGGTaGTTACTCTTTATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQDTFSW*LLFMRK
Trigger: TTTCCTCATAAAGAGTAACAACCATGAGAATGTGTC...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS-3UTR CAA 90 bp ACTTCAATATTTGCATACTCGATAGCAGCATTATTTTTACTGAACCGTGTGCAAACTGTAGCTATCATCTaGTCTAGCTTACTGATGAAT +
Preference number: 5 (lower is better)
Translates to: TSIFAYSIAALFLLNRVQTVAII*SSLLMN
Trigger: ATTCATCAGTAAGCTAGACAAGATGATAGCTACAGT...TTGCACACGGTTCAGTAAAAATAATGCTGCTATCGAGTATGCAAATATTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS-3UTR CAA 90 bp TCACTAACCGGTTTAATTAAAGACAATGACAAAACTAGAACCCAGGTTTCCTTAACTGTAGCTATCATCTaGTCTAGCTTACTGATGAAT +
Preference number: 5 (lower is better)
Translates to: SLTGLIKDNDKTRTQVSLTVAII*SSLLMN
Trigger: ATTCATCAGTAAGCTAGACAAGATGATAGCTACAGT...TAAGGAAACCTGGGTTCTAGTTTTGTCATTGTCTTTAATTAAACCGGTTAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344157.9
ENST00000615500.4
CDS GCA 72 bp TGTCAGCCGCCATGGCTCCCCTTCGGTTTCCGCCGCTaGCACCGCCGCCGCCGCTTAGACGCGACTCGCGCG +
Preference number: 6 (lower is better)
Translates to: CQPPWLPFGFRR*HRRRRLDATRA
Trigger: CGCGCGAGTCGCGTCTAAGCGGCGGCGGCGGTGGCAGCGGCGGAAACCGAAGGGGAGCCATGGCGGCTGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000510746.1
ENST00000613637.3
ENST00000615500.4
ENST00000625493.1
CDS GCA 72 bp CCGCGGCAGAAGCACGGGCCCGTCCGTCAGTCCGTCTaGCCGGATACGCGCGTCGCACTTGGCCTCTTAACA +
Preference number: 6 (lower is better)
Translates to: PRQKHGPVRQSV*PDTRVALGLLT
Trigger: TGTTAAGAGGCCAAGTGCGACGCGCGTATCCGGGCAGACGGACTGACGGACGGGCCCGTGCTTCTGCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000510746.1
ENST00000613637.3
ENST00000615500.4
ENST00000625493.1
CDS CCA 72 bp CCGTCAGTCCGTCTGCCCGGATACGCGCGTCGCACTTaGCCTCTTAACACTCAGCCTTCTCGACTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: PSVRLPGYARRT*PLNTQPSRLFP
Trigger: CGGGAAGAGTCGAGAAGGCTGAGTGTTAAGAGGCCAAGTGCGACGCGCGTATCCGGGCAGACGGACTGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000510746.1
ENST00000613637.3
ENST00000615500.4
ENST00000625493.1
CDS TCA 72 bp ATCCCGGACTGGTTCTCGACGGGATGGACGTCCTCGTaGTCGGGGCTGAGAATGCATTCTTCTCTTGTGACG +
Preference number: 6 (lower is better)
Translates to: IPDWFSTGWTSS*SGLRMHSSLVT
Trigger: CGTCACAAGAGAAGAATGCATTCTCAGCCCCGATCACGAGGACGTCCATCCCGTCGAGAACCAGTCCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000506175.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627135.1
ENST00000627168.2
CDS CAA 90 bp TTGAGGAGGTGGAGCATGGTGCTGATAGTAAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGGGGGCATTCCTTGCCAAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: LRRWSMVLIVRMVWR*FHSWVRGHSLPRWW
Trigger: CCACCACCTTGGCAAGGAATGCCCCCTTACCCAGGAATGGAACAACCTCCACACCATCCTTACTATCAGCACCATGCTCCACCTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CCA 72 bp CTGATAGTAAGGATGGTGTGGAGGTTGTTCCATTCCTaGGTAAGGGGGCATTCCTTGCCAAGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: LIVRMVWRLFHS*VRGHSLPRWWW
Trigger: CCACCACCACCTTGGCAAGGAATGCCCCCTTACCCAGGAATGGAACAACCTCCACACCATCCTTACTATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CCA 72 bp AGGAGGTGGAGCATGGTGCTGATAGTAAGGATGGTGTaGAGGTTGTTCCATTCCTGGGTAAGGGGGCATTCC +
Preference number: 6 (lower is better)
Translates to: RRWSMVLIVRMV*RLFHSWVRGHS
Trigger: GGAATGCCCCCTTACCCAGGAATGGAACAACCTCCACACCATCCTTACTATCAGCACCATGCTCCACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CAA 72 bp AGCCCAATTCTCTCAGAACCATCTGGCGTAGGAGATTaGGCCCTCCTTTCAGGATCCCTTTTCCGGACACAG +
Preference number: 6 (lower is better)
Translates to: SPILSEPSGVGD*ALLSGSLFRTQ
Trigger: CTGTGTCCGGAAAAGGGATCCTGAAAGGAGGGCCAAATCTCCTACGCCAGATGGTTCTGAGAGAATTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 72 bp TGGAGCATGGTGCTGATAGTAAGGATGGTGTGGAGGTaGTTCCATTCCTGGGTAAGGGGGCATTCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: WSMVLIVRMVWR*FHSWVRGHSLP
Trigger: TGGCAAGGAATGCCCCCTTACCCAGGAATGGAACAACCTCCACACCATCCTTACTATCAGCACCATGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CAA 72 bp TTCACGGGGTCTACTTCTCCGGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATCATCCACCCTCATATC +
Preference number: 6 (lower is better)
Translates to: FTGSTSPATDNS*CATKEIIHPHI
Trigger: GATATGAGGGTGGATGATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTAGACCCCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 90 bp CCGGTCTCTTTCACGGGGTCTACTTCTCCGGCCACTGACAACAGCTaGTGTGCGACGAAGGAAATCATCCACCCTCATATCATAATCATG +
Preference number: 6 (lower is better)
Translates to: PVSFTGSTSPATDNS*CATKEIIHPHIIIM
Trigger: CATGATTATGATATGAGGGTGGATGATTTCCTTCGTCGCACACAAGCTGTTGTCAGTGGCCGGAGAAGTAGACCCCGTGAAAGAGACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS TCA 72 bp TCTGTATCTTGCTTCATGTGGTACTGGATGATGTCCTaGGTAAGGGGGATGAGCTTGAGGAGGTGGAGCATG +
Preference number: 6 (lower is better)
Translates to: SVSCFMWYWMMS*VRGMSLRRWSM
Trigger: CATGCTCCACCTCCTCAAGCTCATCCCCCTTACTCAGGACATCATCCAGTACCACATGAAGCAAGATACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CCA 72 bp CATTCCTGGGTAAGGGGGCATTCCTTGCCAAGGTGGTaGTGGTCCCATGTTATGAAATTCCCTCACATAATC +
Preference number: 6 (lower is better)
Translates to: HSWVRGHSLPRW*WSHVMKFPHII
Trigger: GATTATGTGAGGGAATTTCATAACATGGGACCACCACCACCTTGGCAAGGAATGCCCCCTTACCCAGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CCA 72 bp TCCTGGGTAAGGGGGCATTCCTTGCCAAGGTGGTGGTaGTCCCATGTTATGAAATTCCCTCACATAATCATT +
Preference number: 6 (lower is better)
Translates to: SWVRGHSLPRWW*SHVMKFPHIII
Trigger: AATGATTATGTGAGGGAATTTCATAACATGGGACCACCACCACCTTGGCAAGGAATGCCCCCTTACCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000507529.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000628264.1
CDS CAA 90 bp CACCTTTGCCTCCTTGTGCACTTACTACTCGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGATGATGTCCTGAGTAAGGGGGATGAG +
Preference number: 6 (lower is better)
Translates to: HLCLLVHLLLVYLCI*LHVVLDDVLSKGDE
Trigger: CTCATCCCCCTTACTCAGGACATCATCCAGTACCACATGAAGCAAGATACAGAGATAAACGAGTAGTAAGTGCACAAGGAGGCAAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS GCA 72 bp GTTCACTTCTTCCTTAGAAGACTGGCTGGATCTGCTTaGACGTCTATCCACTTCAAGCCCAATTCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: VHFFLRRLAGSA*TSIHFKPNSLR
Trigger: TCTGAGAGAATTGGGCTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGAAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CCA 72 bp CCATATTCTTCAGAGTTCACTTCTTCCTTAGAAGACTaGCTGGATCTGCTTGCACGTCTATCCACTTCAAGC +
Preference number: 6 (lower is better)
Translates to: PYSSEFTSSLED*LDLLARLSTSS
Trigger: GCTTGAAGTGGATAGACGTGCAAGCAGATCCAGCCAGTCTTCTAAGGAAGAAGTGAACTCTGAAGAATATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 90 bp GACCCATTTAAAAACACATCTCGGCGAACTCCTGAAAATCGTCTGTaGGGAATAAGATTTGTGAAACTGTCCACTTCCTGGTATCGTGGA +
Preference number: 6 (lower is better)
Translates to: DPFKNTSRRTPENRL*GIRFVKLSTSWYRG
Trigger: TCCACGATACCAGGAAGTGGACAGTTTCACAAATCTTATTCCCAACAGACGATTTTCAGGAGTTCGCCGAGATGTGTTTTTAAATGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579690.5
ENST00000627168.2
CDS GCA 72 bp GAAACTCAGGGGGATAGTCAATCCTTGGTTTCTTTCTaGTGTTATGAATATCATAATCTTCTGGTCGACGCC +
Preference number: 6 (lower is better)
Translates to: ETQGDSQSLVSF*CYEYHNLLVDA
Trigger: GGCGTCGACCAGAAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATCCCCCTGAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CCA 72 bp ATGCAAGATTTAATTTCTTCTCATTTACAGGGAGCGTaGACCATACACCCTTCGCTTTGGCAAGAGACACAT +
Preference number: 6 (lower is better)
Translates to: MQDLISSHLQGA*TIHPSLWQETH
Trigger: ATGTGTCTCTTGCCAAAGCGAAGGGTGTATGGTCCACGCTCCCTGTAAATGAGAAGAAATTAAATCTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 72 bp CTCCTTGTGCACTTACTACTCGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGATGATGTCCTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: LLVHLLLVYLCI*LHVVLDDVLSK
Trigger: CTTACTCAGGACATCATCCAGTACCACATGAAGCAAGATACAGAGATAAACGAGTAGTAAGTGCACAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS CAA 72 bp GTTACCTACAGAATTCTAAGTAGTTCCCTCACACCTTaGCCTCCTTGTGCACTTACTACTCGTTTATCTCTG +
Preference number: 6 (lower is better)
Translates to: VTYRILSSSLTP*PPCALTTRLSL
Trigger: CAGAGATAAACGAGTAGTAAGTGCACAAGGAGGCAAAGGTGTGAGGGAACTACTTAGAATTCTGTAGGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507529.1
ENST00000628264.1
CDS GCA 72 bp TTTCGGACAGCACGAACGGAAGATGATAATTTCTCATaGTTCTTTTCTGAACCTGCATATGACTCTGATGCA +
Preference number: 6 (lower is better)
Translates to: FRTARTEDDNFS*FFSEPAYDSDA
Trigger: TGCATCAGAGTCATATGCAGGTTCAGAAAAGAAGCATGAGAAATTATCATCTTCCGTTCGTGCTGTCCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344157.9
ENST00000579690.5
ENST00000615500.4
ENST00000627168.2
CDS CCA 72 bp AAGTTCAATTTCCTGTCCATCACGTCCGATCTTTACTaGTTTATGTTCATTCCAAGGATTGGTGAGATGAGC +
Preference number: 6 (lower is better)
Translates to: KFNFLSITSDLY*FMFIPRIGEMS
Trigger: GCTCATCTCACCAATCCTTGGAATGAACATAAACCAGTAAAGATCGGACGTGATGGACAGGAAATTGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000506175.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627135.1
ENST00000627168.2
CDS CAA 90 bp TTAAATACCCTGGTCTCTGGTGAAACTCAGGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTATGAATATCATAATCTTCTGGTCGAC +
Preference number: 6 (lower is better)
Translates to: LNTLVSGETQGDSQS*VSFCCYEYHNLLVD
Trigger: GTCGACCAGAAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATCCCCCTGAGTTTCACCAGAGACCAGGGTATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS TCA 72 bp TCAATGAAGCCACAAACTAGTCCATGCAGCTTGATTTaGGGATTTTCTCTTTCTTCTTTACCGCAGGACAAA +
Preference number: 6 (lower is better)
Translates to: SMKPQTSPCSLI*GFSLSSLPQDK
Trigger: TTTGTCCTGCGGTAAAGAAGAAAGAGAAAATCCTCAAATCAAGCTGCATGGACTAGTTTGTGGCTTCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1
CDS CAA 72 bp CTGGTCTCTGGTGAAACTCAGGGGGATAGTCAATCCTaGGTTTCTTTCTGCTGTTATGAATATCATAATCTT +
Preference number: 6 (lower is better)
Translates to: LVSGETQGDSQS*VSFCCYEYHNL
Trigger: AAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATCCCCCTGAGTTTCACCAGAGACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 72 bp ACCAGTTGTCTAGAATGGACAGAAGGCTTTTGTCGTTaGGTATCAGTAGATTCCATTCGATCACTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: TSCLEWTEGFCR*VSVDSIRSLFL
Trigger: AAGAAAAAGTGATCGAATGGAATCTACTGATACCAAACGACAAAAGCCTTCTGTCCATTCTAGACAACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000505251.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000629100.1
CDS CAA 72 bp TCATATCATAATCATGTACTCGTTTATCTCTGTATCTaGCTTCATGTGGTACTGGATGATGTCCTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: SYHNHVLVYLCI*LHVVLDDVLSK
Trigger: CTTACTCAGGACATCATCCAGTACCACATGAAGCAAGATACAGAGATAAACGAGTACATGATTATGATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 90 bp TTTTTATACTCTGTGGCTGACTTTCCTTTTGTACTAACTATTCTTTaGTTATTGCTAACAGATGAGCTCAGTGGCTTAGAAACCAGTTGT +
Preference number: 6 (lower is better)
Translates to: FLYSVADFPFVLTIL*LLLTDELSGLETSC
Trigger: ACAACTGGTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAACAAAAGAATAGTTAGTACAAAAGGAAAGTCAGCCACAGAGTATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
CDS CAA 72 bp GGATTTTCTCTTTCTTCTTTACCGCAGGACAAACTTTaGACGAATCATATTCCTCCATCATGTTATTCTGAT +
Preference number: 6 (lower is better)
Translates to: GFSLSSLPQDKL*TNHIPPSCYSD
Trigger: ATCAGAATAACATGATGGAGGAATATGATTCGTCAAAAGTTTGTCCTGCGGTAAAGAAGAAAGAGAAAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1
CDS TCA 72 bp TTTTGTACTAACTATTCTTTTGTTATTGCTAACAGATaGGCTCAGTGGCTTAGAAACCAGTTGTCTAGAATG +
Preference number: 6 (lower is better)
Translates to: FCTNYSFVIANR*AQWLRNQLSRM
Trigger: CATTCTAGACAACTGGTTTCTAAGCCACTGAGCTCATCTGTTAGCAATAACAAAAGAATAGTTAGTACAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344157.9
ENST00000355665.7
ENST00000505251.1
ENST00000579690.5
ENST00000613637.3
ENST00000615500.4
ENST00000627168.2
ENST00000629100.1
CDS TCA 72 bp ACTTTTGACGAATCATATTCCTCCATCATGTTATTCTaGTACATGTGCCTATTATCAGTCCAAAGAACGTTT +
Preference number: 6 (lower is better)
Translates to: TFDESYSSIMLF*YMCLLSVQRTF
Trigger: AAACGTTCTTTGGACTGATAATAGGCACATGTATCAGAATAACATGATGGAGGAATATGATTCGTCAAAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1
CDS TCA 72 bp GATTTTCTCTTTCTTCTTTACCGCAGGACAAACTTTTaGCGAATCATATTCCTCCATCATGTTATTCTGATA +
Preference number: 6 (lower is better)
Translates to: DFLFLLYRRTNF*RIIFLHHVILI
Trigger: TATCAGAATAACATGATGGAGGAATATGATTCGTCAAAAGTTTGTCCTGCGGTAAAGAAGAAAGAGAAAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506175.1
ENST00000627135.1