Pregenerated sensors for YRDC (Homo sapiens)
Ensembl gene IDs: ENSG00000196449Ensembl transcript IDs: ENST00000373044.3
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | CGCGGCCGAGGCATACGGCCAGAGGCTTGGCCTCGCTGCGACCCTTaGGGCGGTACACAGCGCGCAGAGCCGCCGAGCAGCTCGCCGCGC | + |
Preference number: 5 (lower is better) Translates to: RGRGIRPEAWPRCDP*GGTQRAEPPSSSPR Trigger: GCGCGGCGAGCTGCTCGGCGGCTCTGCGCGCTGTGTACCGCCTCAAGGGTCGCAGCGAGGCCAAGCCTCTGGCCGTATGCCTCGGCCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373044.3 |
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CDS CAA 90 bp | ACGCGGCCGAGGCATACGGCCAGAGGCTTGGCCTCGCTGCGACCCTaGAGGCGGTACACAGCGCGCAGAGCCGCCGAGCAGCTCGCCGCG | + |
Preference number: 6 (lower is better) Translates to: TRPRHTARGLASLRP*RRYTARRAAEQLAA Trigger: CGCGGCGAGCTGCTCGGCGGCTCTGCGCGCTGTGTACCGCCTCAAGGGTCGCAGCGAGGCCAAGCCTCTGGCCGTATGCCTCGGCCGCGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373044.3 |
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CDS CAA 72 bp | ACGTCGGCCACGCGGCCGAGGCATACGGCCAGAGGCTaGGCCTCGCTGCGACCCTTGAGGCGGTACACAGCG | + |
Preference number: 6 (lower is better) Translates to: TSATRPRHTARG*ASLRPLRRYTA Trigger: CGCTGTGTACCGCCTCAAGGGTCGCAGCGAGGCCAAGCCTCTGGCCGTATGCCTCGGCCGCGTGGCCGACGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373044.3 |