RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YPEL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175155

Ensembl transcript IDs: ENST00000312655.9, ENST00000581865.1, ENST00000582192.1, ENST00000582813.1, ENST00000585166.1, ENST00000672916.2

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGTCATCGCACCCACCTGGCCACTGCCCAGGTCACTCGCTGCTaGCAGGACACTCCCCCACTCAGCCCAGGAGAACCAGGCCCTTGC +
Preference number: 1 (lower is better)
Translates to: QSHRTHLATAQVTRC*QDTPPLSPGEPGPC
Trigger: GCAAGGGCCTGGTTCTCCTGGGCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCGATGACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp CATCAGAGTCATCGCACCCACCTGGCCACTGCCCAGGTCACTCGCTaGTGCCAGGACACTCCCCCACTCAGCCCAGGAGAACCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: HQSHRTHLATAQVTR*CQDTPPLSPGEPGP
Trigger: AGGGCCTGGTTCTCCTGGGCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCGATGACTCTGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp CAGAGACTGAGTGAGGCATCAGAGTCATCGCACCCACCTGGCCACTaGCCAGGTCACTCGCTGCTGCCAGGACACTCCCCCACTCAGCCC +
Preference number: 1 (lower is better)
Translates to: QRLSEASESSHPPGH*PGHSLLPGHSPTQP
Trigger: GGGCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCGATGACTCTGATGCCTCACTCAGTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp CCCTTAGAGTTTCCCCTTTCCCTCTTCCTCACGCCCCCGTGCCACTaGTCTCCTGACAAGAGGCCATCAGGCAGCTCTCGCATGGGCCCT +
Preference number: 1 (lower is better)
Translates to: PLEFPLSLFLTPPCH*SPDKRPSGSSRMGP
Trigger: AGGGCCCATGCGAGAGCTGCCTGATGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAAGAGGGAAAGGGGAAACTCTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp CCAGGACCCTTAGAGTTTCCCCTTTCCCTCTTCCTCACGCCCCCGTaGCACTGCTCTCCTGACAAGAGGCCATCAGGCAGCTCTCGCATG +
Preference number: 1 (lower is better)
Translates to: PGPLEFPLSLFLTPP*HCSPDKRPSGSSRM
Trigger: CATGCGAGAGCTGCCTGATGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAAGAGGGAAAGGGGAAACTCTAAGGGTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GGCCATCAGGCAGCTCTCGCATGGGCCCTGGGGCCCTTACCAAGGTaGGCTGCCGCCATGCGGTCAAGGATCTGTTCCTTTTGTTGTTTT +
Preference number: 1 (lower is better)
Translates to: GHQAALAWALGPLPR*AAAMRSRICSFCCF
Trigger: AAAACAACAAAAGGAACAGATCCTTGACCGCATGGCGGCAGCCCACCTTGGTAAGGGCCCCAGGGCCCATGCGAGAGCTGCCTGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GGGTCTGGGTCTACTCCAAGGTGGCCAAGGTCATATGACCTAGGGTaGCACAGGGGAGATGGAGCTAGAGAGTCTGCTGGCTGGACTTCA +
Preference number: 1 (lower is better)
Translates to: GSGSTPRWPRSYDLG*HRGDGARESAGWTS
Trigger: TGAAGTCCAGCCAGCAGACTCTCTAGCTCCATCTCCCCTGTGCCACCCTAGGTCATATGACCTTGGCCACCTTGGAGTAGACCCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp CGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATaGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTC +
Preference number: 1 (lower is better)
Translates to: RQGGRMPRMARPLNG*NQVSVTLSRLGRMF
Trigger: GAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATaGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAAT +
Preference number: 1 (lower is better)
Translates to: MASGWEDAPDGKAPK*MEPSVSHSLTLGKN
Trigger: ATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR TCA 90 bp GCTCTCCACTTCCCTAATCGAAGGATGCTTGGATGGGGGAAGGGGTaGTATCGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACA +
Preference number: 1 (lower is better)
Translates to: ALHFPNRRMLGWGKG*YRNLGRTPPCCWTT
Trigger: TGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAAGTGGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp GATATCGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTaGCAGGAGATTTCTCTCCATGCAAGACATTCAGGCCTAAGTGGG +
Preference number: 1 (lower is better)
Translates to: DIGIWAELLPAAGPH*QEISLHARHSGLSG
Trigger: CCCACTTAGGCCTGAATGTCTTGCATGGAGAGAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp TATGGGCCTTACAGGGATGTGCTCTCCACTTCCCTAATCGAAGGATaGTTGGATGGGGGAAGGGGTGATATCGGAATTTGGGCAGAACTC +
Preference number: 1 (lower is better)
Translates to: YGPYRDVLSTSLIEG*LDGGRGDIGIWAEL
Trigger: GAGTTCTGCCCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAAGTGGAGAGCACATCCCTGTAAGGCCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp AGAGAGTCTGCTGGCTGGACTTCAGTTCCAAACGAAGGCAGCTGCTaGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACGTCCCC +
Preference number: 1 (lower is better)
Translates to: RESAGWTSVPNEGSC*LRYRTSCLFLSHVP
Trigger: GGGGACGTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTTTGGAACTGAAGTCCAGCCAGCAGACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp AACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTaGATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCAA +
Preference number: 1 (lower is better)
Translates to: NQVSVTLSRLGRMFG*MAFTWTLGWVDAVQ
Trigger: TTGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR TCA 90 bp AGGACGCGCTCTGAATGGAAACTGGTTCTGCTGCAGACGCTATTCTaGAAAGCTCCTGGGCTGTTGGCTGCTTTCATCTCAGTTCATCAC +
Preference number: 1 (lower is better)
Translates to: RTRSEWKLVLLQTLF*KAPGLLAAFISVHH
Trigger: GTGATGAACTGAGATGAAAGCAGCCAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp AGTCTGCTGGCTGGACTTCAGTTCCAAACGAAGGCAGCTGCTGGCTaGGGTATAGAACTTCATGCCTTTTCCTTTCTCACGTCCCCTTAC +
Preference number: 1 (lower is better)
Translates to: SLLAGLQFQTKAAAG*GIELHAFSFLTSPY
Trigger: GTAAGGGGACGTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTTTGGAACTGAAGTCCAGCCAGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp AAGCATTTCCACCAAGGACGCGCTCTGAATGGAAACTGGTTCTGCTaGAGACGCTATTCTGAAAAGCTCCTGGGCTGTTGGCTGCTTTCA +
Preference number: 1 (lower is better)
Translates to: KHFHQGRALNGNWFC*RRYSEKLLGCWLLS
Trigger: TGAAAGCAGCCAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGTGGAAATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTATCTACGGTaGCTAGAGGCAAAGATGATGATTGCCCAGAGACTGAGTGAGGCA +
Preference number: 1 (lower is better)
Translates to: GKPIANSSPFTPYLR*LEAKMMIAQRLSEA
Trigger: TGCCTCACTCAGTCTCTGGGCAATCATCATCTTTGCCTCTAGCCACCGTAGATAAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp GAGCCATTTCTTCAGGAGCTCCCAAACTGCAGCCCCTTTGTGCCCTaGTCTCCTCAATTACTGATTTTACTTGGTTGCTGGTCAAAGCCT +
Preference number: 1 (lower is better)
Translates to: EPFLQELPNCSPFVP*SPQLLILLGCWSKP
Trigger: AGGCTTTGACCAGCAACCAAGTAAAATCAGTAATTGAGGAGAGCAGGGCACAAAGGGGCTGCAGTTTGGGAGCTCCTGAAGAAATGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp AAAAAGCATTTCCACCAAGGACGCGCTCTGAATGGAAACTGGTTCTaGTGCAGACGCTATTCTGAAAAGCTCCTGGGCTGTTGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: KKHFHQGRALNGNWF*CRRYSEKLLGCWLL
Trigger: AAGCAGCCAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGTGGAAATGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp TCAGTTCCAAACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATaGCTTTTCCTTTCTCACGTCCCCTTACCCTGTCTCTACTCCCAA +
Preference number: 1 (lower is better)
Translates to: SVPNEGSCWLRYRTS*LFLSHVPLPCLYSQ
Trigger: TTGGGAGTAGAGACAGGGTAAGGGGACGTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTTTGGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GGGCATGAGGAATCTACCAGCCAGGTTATTACTAAGCTCAGAGCCTaGGGCCCGTGCTTTCTACAGTCTACAGTAACAAGACTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: GHEESTSQVITKLRA*GPCFLQSTVTRLEK
Trigger: TTTCTCCAGTCTTGTTACTGTAGACTGTAGAAAGCACGGGCCCCAGGCTCTGAGCTTAGTAATAACCTGGCTGGTAGATTCCTCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp GAATCTACCAGCCAGGTTATTACTAAGCTCAGAGCCTGGGGCCCGTaGTTTCTACAGTCTACAGTAACAAGACTGGAGAAAAACACCCGA +
Preference number: 1 (lower is better)
Translates to: ESTSQVITKLRAWGP*FLQSTVTRLEKNTR
Trigger: TCGGGTGTTTTTCTCCAGTCTTGTTACTGTAGACTGTAGAAAGCACGGGCCCCAGGCTCTGAGCTTAGTAATAACCTGGCTGGTAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTATaGCGCCTTGCACCCACTGAAGGCTCACTGGATAGTCACCGAAAA +
Preference number: 1 (lower is better)
Translates to: VMEKPTLYSALSQQV*RLAPTEGSLDSHRK
Trigger: TTTTCGGTGACTATCCAGTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp AGAACACTCAGTCAGGTTCAGCTGACAGCTTGTGGGTATCGAGTTTaGCTGTGTTTGGTTCATGTCAAATCAATCCATCAGCAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: RTLSQVQLTACGYRV*LCLVHVKSIHQQPE
Trigger: CTCAGGCTGCTGATGGATTGATTTGACATGAACCAAACACAGCCAAACTCGATACCCACAAGCTGTCAGCTGAACCTGACTGAGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp TACCTTGCAGTAAAGTGGGGAGAACAACTTGATCTCCCAGGGCTATaGAAGCACTGGAAAGATCTGGACAAGAAGCCTTGGGGAACAAAA +
Preference number: 1 (lower is better)
Translates to: YLAVKWGEQLDLPGL*KHWKDLDKKPWGTK
Trigger: TTTTGTTCCCCAAGGCTTCTTGTCCAGATCTTTCCAGTGCTTTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCACTTTACTGCAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 90 bp AGCCCCTTTGTGCCCTGCTCTCCTCAATTACTGATTTTACTTGGTTaGTGGTCAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCA +
Preference number: 1 (lower is better)
Translates to: SPFVPCSPQLLILLG*WSKPLGYLDGKPIA
Trigger: TGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTGACCAGCAACCAAGTAAAATCAGTAATTGAGGAGAGCAGGGCACAAAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp AGAATCAGGGCCACATCTTGTGCTCATTTGCTAACCTGGCACATTTaGTGTCAGGAACAGAAGCTTCTAGTCAGAGAGAATGCAGTCATG +
Preference number: 1 (lower is better)
Translates to: RIRATSCAHLLTWHI*CQEQKLLVRENAVM
Trigger: CATGACTGCATTCTCTCTGACTAGAAGCTTCTGTTCCTGACACCAAATGTGCCAGGTTAGCAAATGAGCACAAGATGTGGCCCTGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp CGTGAACTCAGGAAGAACACTCAGTCAGGTTCAGCTGACAGCTTGTaGGTATCGAGTTTGGCTGTGTTTGGTTCATGTCAAATCAATCCA +
Preference number: 1 (lower is better)
Translates to: RELRKNTQSGSADSL*VSSLAVFGSCQINP
Trigger: TGGATTGATTTGACATGAACCAAACACAGCCAAACTCGATACCCACAAGCTGTCAGCTGAACCTGACTGAGTGTTCTTCCTGAGTTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp CTTCTGAACTTCAGTCTACCTTGCAGTAAAGTGGGGAGAACAACTTaGTCTCCCAGGGCTATGAAAGCACTGGAAAGATCTGGACAAGAA +
Preference number: 1 (lower is better)
Translates to: LLNFSLPCSKVGRTT*SPRAMKALERSGQE
Trigger: TTCTTGTCCAGATCTTTCCAGTGCTTTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCACTTTACTGCAAGGTAGACTGAAGTTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 90 bp GAGAACAACTTGATCTCCCAGGGCTATGAAAGCACTGGAAAGATCTaGACAAGAAGCCTTGGGGAACAAAAGTTGATTTCTAAGCCCACA +
Preference number: 1 (lower is better)
Translates to: ENNLISQGYESTGKI*TRSLGEQKLISKPT
Trigger: TGTGGGCTTAGAAATCAACTTTTGTTCCCCAAGGCTTCTTGTCCAGATCTTTCCAGTGCTTTCATAGCCCTGGGAGATCAAGTTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp GCCAGAGAAACTATTCTTCTGGGAGCAGAAATTCAGTATTTCTTCTaGACTTCAGTCTACCTTGCAGTAAAGTGGGGAGAACAACTTGAT +
Preference number: 1 (lower is better)
Translates to: ARETILLGAEIQYFF*TSVYLAVKWGEQLD
Trigger: ATCAAGTTGTTCTCCCCACTTTACTGCAAGGTAGACTGAAGTTCAGAAGAAATACTGAATTTCTGCTCCCAGAAGAATAGTTTCTCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp CGATACGTGATTAATACACTCTCATCTCAGTTAGAAGCACAGATTTaGCTCTGCTCCATCTTCACAAACAACACATCTCCTTTACAGTCT +
Preference number: 1 (lower is better)
Translates to: RYVINTLSSQLEAQI*LCSIFTNNTSPLQS
Trigger: AGACTGTAAAGGAGATGTGTTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGTGTATTAATCACGTATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 90 bp ATTTTCTTATGGGAAGGACTATCAATAAACAGCCAGGACAATCGCTaGGGAAAGAGTCCAATGAAAATCCATAAAGGAAGACTATTTCCT +
Preference number: 1 (lower is better)
Translates to: IFLWEGLSINSQDNR*GKSPMKIHKGRLFP
Trigger: AGGAAATAGTCTTCCTTTATGGATTTTCATTGGACTCTTTCCTCAGCGATTGTCCTGGCTGTTTATTGATAGTCCTTCCCATAAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGAGAACTCCTCCCTGCTaGTGGACCACACTGACAGGA +
Preference number: 2 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGRTPPC*WTTLTG
Trigger: TCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCT...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 90 bp ATTATTTCAAGCCTAAGTTATCAGGTCTCCAGGAGCGGCGCAATTTaGTTCCTACCTCCACCCTTCCACCCCTTCCCCGCGCCAGGACCC +
Preference number: 2 (lower is better)
Translates to: IISSLSYQVSRSGAI*FLPPPFHPFPAPGP
Trigger: GGGTCCTGGCGCGGGGAAGGGGTGGAAGGGTGGAGGTAGGAACAAAATTGCGCCGCTCCTGGAGACCTGATAACTTAGGCTTGAAATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 90 bp GGGCCTTACAGGGATGTGCTCTCCACTTCCCTAATCGAAGGATGCTaGGATGGGGGAAGGGGTGATATCGGAATTTGGGCAGAACTCCTC +
Preference number: 2 (lower is better)
Translates to: GPYRDVLSTSLIEGC*DGGRGDIGIWAELL
Trigger: GAGGAGTTCTGCCCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAAGTGGAGAGCACATCCCTGTAAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGTCAGGGTGGGAGGATaGCCCGGATGGCAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: KCNKLLFLLWALQGCALHVRVGG*PGWQGP
Trigger: GGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGAC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAACGCCCCCGTGCCACTaGTCTCCTGACAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVTPPCH*SPDKRP
Trigger: TGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGAACGAAGGCAGCTGCTaGCTGAGGTATAGAACTTCA +
Preference number: 2 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGNEGSC*LRYRTS
Trigger: TGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: EPSVSHSLTLGKNVR*NGVHVDTGLGRCCP
Trigger: TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CAA 90 bp GCCCTTGCCCCACCAACTAGAATCAGGGCCACATCTTGTGCTCATTaGCTAACCTGGCACATTTGGTGTCAGGAACAGAAGCTTCTAGTC +
Preference number: 2 (lower is better)
Translates to: ALAPPTRIRATSCAH*LTWHIWCQEQKLLV
Trigger: GACTAGAAGCTTCTGTTCCTGACACCAAATGTGCCAGGTTAGCAAATGAGCACAAGATGTGGCCCTGATTCTAGTTGGTGGGGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR TCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGCCAACCCACCTGGGGTaGATGAATGAGGTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: PTRENRRHNRKCFLHTCAPTHLG*MNEVFG
Trigger: ACCAAAGACCTCATTCATTCACCCCAGGTGGGTTGG...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACCAGGAGCTCCCAAACTaGAGCCCCTTTGTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KCNKLLFLLWALQGCALHQELPN*SPFVPC
Trigger: GCAGGGCACAAAGGGGCTGCAGTTTGGGAGCTCCTG...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGTCCCTAATCGAAGGATaGTTGGATGGGGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: PTRENRRHNRKCFLHTCASLIEG*LDGGRG
Trigger: ACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGA...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCACACCTTATCTACGGTaGCTAGAGGCAAAGATGATG +
Preference number: 2 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFTPYLR*LEAKMM
Trigger: CATCATCTTTGCCTCTAGCCACCGTAGATAAGGTGT...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAACAGGTCACTCGCTGCTaGCAGGACACTCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQQVTRC*QDTPPL
Trigger: GAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTG...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAGCACATTGGTCCCCTTaGAAACTTGAGGGCACCCCA +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVAHWSP*KLEGTP
Trigger: TGGGGTGCCCTCAAGTTTCCAAGGGGACCAATGTGC...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR TCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGGTGAGACTTTTAGGGTaGATTTTCCGAGAAGGTCGG +
Preference number: 2 (lower is better)
Translates to: PTRENRRHNRKCFLHTCAVRLLG*IFREGR
Trigger: CCGACCTTCTCGGAAAATTCACCCTAAAAGTCTCAC...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAATTCCTCACGCCCCCGTaGCACTGCTCTCCTGACAAG +
Preference number: 2 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQFLTPP*HCSPDK
Trigger: CTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAA...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAAATCCATGGCTTCTGTaGCGGGAAGCCAGCTTAGGA +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVNPWLL*REASLG
Trigger: TCCTAAGCTGGCTTCCCGGCACAGAAGCCATGGATT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGCTCCTCTTTCTCTTATaGGCCTTACAGGGATGTGCT +
Preference number: 2 (lower is better)
Translates to: PTRENRRHNRKCFLHTCALLFLL*ALQGCA
Trigger: AGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAG...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR TCA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAGGAAGAATGTTCGGTTaGATGGCGTTCACGTGGACA +
Preference number: 2 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSGRMFG*MAFTWT
Trigger: TGTCCACGTGAACGCCATTCAACCGAACATTCTTCC...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAGAATGTTCGGTTGAATaGCGTTCACGTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVECSVE*RSRGHW
Trigger: CCAGTGTCCACGTGAACGCCATTCAACCGAACATTC...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 90 bp AGTCAGGTTCAGCTGACAGCTTGTGGGTATCGAGTTTGGCTGTGTTaGGTTCATGTCAAATCAATCCATCAGCAGCCTGAGACTAATGTC +
Preference number: 2 (lower is better)
Translates to: SQVQLTACGYRVWLC*VHVKSIHQQPETNV
Trigger: GACATTAGTCTCAGGCTGCTGATGGATTGATTTGACATGAACCAAACACAGCCAAACTCGATACCCACAAGCTGTCAGCTGAACCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACCTGTGGCCTCTCCAATaGTGCTCAATGTTAGATAGA +
Preference number: 2 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHLWPLQ*CSMLDR
Trigger: TCTATCTAACATTGAGCAGCATTGGAGAGGCCACAG...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGCACCGAACCTGAACTaGTTCCAATGTAAACCCCTC +
Preference number: 2 (lower is better)
Translates to: KCNKLLFLLWALQGCALHAPNLN*FQCKPL
Trigger: GAGGGGTTTACATTGGAACCAGTTCAGGTTCGGTGC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAGCTCTGAATGGAAACTaGTTCTGCTGCAGACGCTAT +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVALNGN*FCCRRY
Trigger: ATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGC...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAGCTGGTCAAAGCCTTTaGGATATTTGGATGGTAAGC +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVAGQSL*DIWMVS
Trigger: GCTTACCATCCAAATATCCCAAAGGCTTTGACCAGC...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 90 bp TGCTCTCCTCAATTACTGATTTTACTTGGTTGCTGGTCAAAGCCTTaGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: CSPQLLILLGCWSKP*GYLDGKPIANSSPF
Trigger: GAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTGACCAGCAACCAAGTAAAATCAGTAATTGAGGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR GCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAAATGGAAACTGGTTCTaGTGCAGACGCTATTCTGAA +
Preference number: 2 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVNGNWF*CRRYSE
Trigger: TTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAGGCAAGGCCCCTAAATaGATGGAACCAAGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQGKAPK*MEPSVS
Trigger: ACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCC...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR TCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAACTTGGAGGAGATGCTaGGAATTACCTAACACGCAC +
Preference number: 2 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQTWRRC*ELPNTH
Trigger: GTGCGTGTTAGGTAATTCTCAGCATCTCCTCCAAGT...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAAGGCCCCTAAATGGATaGAACCAAGTGTCAGTCACT +
Preference number: 2 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQRPLNG*NQVSVT
Trigger: AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCT...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp CGCACCCACCTGGCCACTGCCCAGGTCACTCGCTGCTaGCAGGACACTCCCCCACTCAGCCCAGGAGAACCA +
Preference number: 3 (lower is better)
Translates to: RTHLATAQVTRC*QDTPPLSPGEP
Trigger: TGGTTCTCCTGGGCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp GCTCTCCTGACAAGAGGCCATCAGGCAGCTCTCGCATaGGCCCTGGGGCCCTTACCAAGGTGGGCTGCCGCC +
Preference number: 3 (lower is better)
Translates to: ALLTRGHQAALA*ALGPLPRWAAA
Trigger: GGCGGCAGCCCACCTTGGTAAGGGCCCCAGGGCCCATGCGAGAGCTGCCTGATGGCCTCTTGTCAGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp CATCGCACCCACCTGGCCACTGCCCAGGTCACTCGCTaGTGCCAGGACACTCCCCCACTCAGCCCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: HRTHLATAQVTR*CQDTPPLSPGE
Trigger: TTCTCCTGGGCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp AGTGAGGCATCAGAGTCATCGCACCCACCTGGCCACTaGCCAGGTCACTCGCTGCTGCCAGGACACTCCCCC +
Preference number: 3 (lower is better)
Translates to: SEASESSHPPGH*PGHSLLPGHSP
Trigger: GGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTGCGATGACTCTGATGCCTCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp GCAGCTCTCGCATGGGCCCTGGGGCCCTTACCAAGGTaGGCTGCCGCCATGCGGTCAAGGATCTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: AALAWALGPLPR*AAAMRSRICSF
Trigger: AAAGGAACAGATCCTTGACCGCATGGCGGCAGCCCACCTTGGTAAGGGCCCCAGGGCCCATGCGAGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp TTTCCCCTTTCCCTCTTCCTCACGCCCCCGTGCCACTaGTCTCCTGACAAGAGGCCATCAGGCAGCTCTCGC +
Preference number: 3 (lower is better)
Translates to: FPLSLFLTPPCH*SPDKRPSGSSR
Trigger: GCGAGAGCTGCCTGATGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAAGAGGGAAAGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp TCTCGCATGGGCCCTGGGGCCCTTACCAAGGTGGGCTaGCGCCATGCGGTCAAGGATCTGTTCCTTTTGTTG +
Preference number: 3 (lower is better)
Translates to: SRMGPGALTKVG*RHAVKDLFLLL
Trigger: CAACAAAAGGAACAGATCCTTGACCGCATGGCGGCAGCCCACCTTGGTAAGGGCCCCAGGGCCCATGCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATaGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: ERQRFRGRSPER*RQGGRMPRMAR
Trigger: CCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR GCA 72 bp TTAGAGTTTCCCCTTTCCCTCTTCCTCACGCCCCCGTaGCACTGCTCTCCTGACAAGAGGCCATCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: LEFPLSLFLTPP*HCSPDKRPSGS
Trigger: GCTGCCTGATGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAAGAGGGAAAGGGGAAACTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGAC +
Preference number: 3 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWGKNVR*NGVHVD
Trigger: GTCCACGTGAACGCCATTCAACCGAACATTCTTCCC...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CCA 72 bp GGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATaGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: GRMPRMARPLNG*NQVSVTLSRLG
Trigger: TCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CCA 72 bp GGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATaGATGGAACCAAGTGTCAGTCACTCTCTCACGCTT +
Preference number: 3 (lower is better)
Translates to: GWEDAPDGKAPK*MEPSVSHSLTL
Trigger: AAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CCA 72 bp TCTACTCCAAGGTGGCCAAGGTCATATGACCTAGGGTaGCACAGGGGAGATGGAGCTAGAGAGTCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: STPRWPRSYDLG*HRGDGARESAG
Trigger: GCCAGCAGACTCTCTAGCTCCATCTCCCCTGTGCCACCCTAGGTCATATGACCTTGGCCACCTTGGAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCAGGAGCGGCGCAATTTaGTTCCTACCTCCACCCTTC +
Preference number: 3 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFRSGAI*FLPPPF
Trigger: GAAGGGTGGAGGTAGGAACAAAATTGCGCCGCTCCT...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp CGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGAC +
Preference number: 3 (lower is better)
Translates to: RMARPLNGWNQVSVTLSRGKNVR*NGVHVD
Trigger: GTCCACGTGAACGCCATTCAACCGAACATTCTTCCC...GCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR-3UTR CAA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGAGTGGGGAGAACAACTaGATCTCCCAGGGCTATGAA +
Preference number: 3 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGSGENN*ISQGYE
Trigger: TTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCACT...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp TTCCCTAATCGAAGGATGCTTGGATGGGGGAAGGGGTaGTATCGGAATTTGGGCAGAACTCCTCCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: FPNRRMLGWGKG*YRNLGRTPPCC
Trigger: GCAGCAGGGAGGAGTTCTGCCCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp CACCAAGGACGCGCTCTGAATGGAAACTGGTTCTGCTaGAGACGCTATTCTGAAAAGCTCCTGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: HQGRALNGNWFC*RRYSEKLLGCW
Trigger: CCAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp ATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTaGCAGGAGATTTCTCTCCATGCAAGACATTCAGGC +
Preference number: 3 (lower is better)
Translates to: IWAELLPAAGPH*QEISLHARHSG
Trigger: GCCTGAATGTCTTGCATGGAGAGAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp TTCCACCAAGGACGCGCTCTGAATGGAAACTGGTTCTaGTGCAGACGCTATTCTGAAAAGCTCCTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: FHQGRALNGNWF*CRRYSEKLLGC
Trigger: ACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACTGCTGGTCAAAGCCTTaGGGATATTTGGATGGTAAG +
Preference number: 3 (lower is better)
Translates to: STQLSHSKYGALHPLKAHCWSKP*GYLDGK
Trigger: CTTACCATCCAAATATCCCAAAGGCTTTGACCAGCA...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp TCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTaGATGGCGTTCACGTGGACACTGGGTTGGGTAGAT +
Preference number: 3 (lower is better)
Translates to: SVTLSRLGRMFG*MAFTWTLGWVD
Trigger: ATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR GCA 72 bp CTTCAGGAGCTCCCAAACTGCAGCCCCTTTGTGCCCTaGTCTCCTCAATTACTGATTTTACTTGGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LQELPNCSPFVP*SPQLLILLGCW
Trigger: CCAGCAACCAAGTAAAATCAGTAATTGAGGAGAGCAGGGCACAAAGGGGCTGCAGTTTGGGAGCTCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp TACAGGGATGTGCTCTCCACTTCCCTAATCGAAGGATaGTTGGATGGGGGAAGGGGTGATATCGGAATTTGG +
Preference number: 3 (lower is better)
Translates to: YRDVLSTSLIEG*LDGGRGDIGIW
Trigger: CCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAAGTGGAGAGCACATCCCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp ATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTaGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGA +
Preference number: 3 (lower is better)
Translates to: MDGTKCQSLSHA*EECSVEWRSRG
Trigger: TCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CCA 72 bp AAGCATTTCCACCAAGGACGCGCTCTGAATGGAAACTaGTTCTGCTGCAGACGCTATTCTGAAAAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: KHFHQGRALNGN*FCCRRYSEKLL
Trigger: CAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGTGGAAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp GCTGGCTGGACTTCAGTTCCAAACGAAGGCAGCTGCTaGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: AGWTSVPNEGSC*LRYRTSCLFLS
Trigger: AGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTTTGGAACTGAAGTCCAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACAGAAGGTCGGCCTACTaGGAGGAGATGCTGAGAATT +
Preference number: 3 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHRRSAY*EEMLRI
Trigger: AATTCTCAGCATCTCCTCCAAGTAGGCCGACCTTCT...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp GTAAAGTGGGGAGAACAACTTGATCTCCCAGGGCTATaGAAGCACTGGAAAGATCTGGACAAGAAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: VKWGEQLDLPGL*KHWKDLDKKPW
Trigger: CCAAGGCTTCTTGTCCAGATCTTTCCAGTGCTTTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCACTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp AGCCAGGTTATTACTAAGCTCAGAGCCTGGGGCCCGTaGTTTCTACAGTCTACAGTAACAAGACTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: SQVITKLRAWGP*FLQSTVTRLEK
Trigger: TTTCTCCAGTCTTGTTACTGTAGACTGTAGAAAGCACGGGCCCCAGGCTCTGAGCTTAGTAATAACCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp ATTGCAAACAGCAGTCCCTTCACACCTTATCTACGGTaGCTAGAGGCAAAGATGATGATTGCCCAGAGACTG +
Preference number: 3 (lower is better)
Translates to: IANSSPFTPYLR*LEAKMMIAQRL
Trigger: CAGTCTCTGGGCAATCATCATCTTTGCCTCTAGCCACCGTAGATAAGGTGTGAAGGGACTGCTGTTTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp ACTGGTTCTGCTGCAGACGCTATTCTGAAAAGCTCCTaGGCTGTTGGCTGCTTTCATCTCAGTTCATCACTT +
Preference number: 3 (lower is better)
Translates to: TGSAADAILKSS*AVGCFHLSSSL
Trigger: AAGTGATGAACTGAGATGAAAGCAGCCAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAGCAGAACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAAATCAGGGCCACATCTaGTGCTCATTTGCTAACCTG +
Preference number: 3 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVNQGHI*CSFANL
Trigger: CAGGTTAGCAAATGAGCACAAGATGTGGCCCTGATT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp AGGAAGAACACTCAGTCAGGTTCAGCTGACAGCTTGTaGGTATCGAGTTTGGCTGTGTTTGGTTCATGTCAA +
Preference number: 3 (lower is better)
Translates to: RKNTQSGSADSL*VSSLAVFGSCQ
Trigger: TTGACATGAACCAAACACAGCCAAACTCGATACCCACAAGCTGTCAGCTGAACCTGACTGAGTGTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CCA 72 bp AACCCGCAACAGCTCCATACTCAAAACAAATCCTCGTaGGTTCTGCTGTTGGTCCACTCAGAAACAGAAACA +
Preference number: 3 (lower is better)
Translates to: NPQQLHTQNKSS*VLLLVHSETET
Trigger: TGTTTCTGTTTCTGAGTGGACCAACAGCAGAACCCACGAGGATTTGTTTTGAGTATGGAGCTGTTGCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR-3UTR CAA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTATCTAAGAACAAGAAATaGACGATCCCACGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVSKNKK*TIPRKP
Trigger: TGGCTTCCGTGGGATCGTCAATTTCTTGTTCTTAGA...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp CACCAACAAACTCCAATTACCCCAACCCACCTGGGGTaGATGAATGAGGTCTTTGGTTATGCTCTAAGTCAA +
Preference number: 3 (lower is better)
Translates to: HQQTPITPTHLG*MNEVFGYALSQ
Trigger: TTGACTTAGAGCATAACCAAAGACCTCATTCATTCACCCCAGGTGGGTTGGGGTAATTGGAGTTTGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR GCA 72 bp TTTAGCATCTCCATAGCTCAGCTGTGGCCTCTCCAATaGTGCTCAATGTTAGATAGACAACCCATGAACAGA +
Preference number: 3 (lower is better)
Translates to: FSISIAQLWPLQ*CSMLDRQPMNR
Trigger: TCTGTTCATGGGTTGTCTATCTAACATTGAGCAGCATTGGAGAGGCCACAGCTGAGCTATGGAGATGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp TGGAGAAAAACACCCGAAACTCTAAGAACAAGAAATTaGCGATCCCACGGAAGCCACTGTAAAACCGAAGAG +
Preference number: 3 (lower is better)
Translates to: WRKTPETLRTRN*RSHGSHCKTEE
Trigger: CTCTTCGGTTTTACAGTGGCTTCCGTGGGATCGTCAATTTCTTGTTCTTAGAGTTTCGGGTGTTTTTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp ATTTTCCGAGAAGGTCGGCCTACTTGGAGGAGATGCTaGGAATTACCTAACACGCACACGTATCTTAACAAT +
Preference number: 3 (lower is better)
Translates to: IFREGRPTWRRC*ELPNTHTYLNN
Trigger: ATTGTTAAGATACGTGTGCGTGTTAGGTAATTCTCAGCATCTCCTCCAAGTAGGCCGACCTTCTCGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp AACTCCAATTACCCCAACCCACCTGGGGTGAATGAATaGGGTCTTTGGTTATGCTCTAAGTCAATAATTTGG +
Preference number: 3 (lower is better)
Translates to: NSNYPNPPGVNE*GLWLCSKSIIW
Trigger: CCAAATTATTGACTTAGAGCATAACCAAAGACCTCATTCATTCACCCCAGGTGGGTTGGGGTAATTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp ACTATTCTTCTGGGAGCAGAAATTCAGTATTTCTTCTaGACTTCAGTCTACCTTGCAGTAAAGTGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: TILLGAEIQYFF*TSVYLAVKWGE
Trigger: TTCTCCCCACTTTACTGCAAGGTAGACTGAAGTTCAGAAGAAATACTGAATTTCTGCTCCCAGAAGAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR TCA 72 bp ATTAATACACTCTCATCTCAGTTAGAAGCACAGATTTaGCTCTGCTCCATCTTCACAAACAACACATCTCCT +
Preference number: 3 (lower is better)
Translates to: INTLSSQLEAQI*LCSIFTNNTSP
Trigger: AGGAGATGTGTTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGTGTATTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCGGGGCTTGGCTCCGCTaGGGTGCGCAGCGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFGAWLR*GAQRRS
Trigger: GCTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCC...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGGCCCAGGTCACTCGCTaGTGCCAGGACACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRAQVTR*CQDTPP
Trigger: TGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGC...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CACCTGGCCACTGCCCAGGTCACTCGCTGCTGCCAGGACACTCCCCCACTCAGCTCCCTAATCGAAGGATaGTTGGATGGGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HLATAQVTRCCQDTPPLSSLIEG*LDGGRG
Trigger: ACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGA...GCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCCCTGTCCGGCCAGCGTaGGGCTTGGCTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCPVRPA*GLAPLG
Trigger: CCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGG...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTTTGGCTCCGCTGGGGTaGGCAGCGGCGAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVLAPLG*AAAKRG
Trigger: GCCGCGCTTCGCCGCTGCGCACCCCAGCGGAGCCAA...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGGTCAGGGTGGGAGGATaGCCCGGATGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGVRVGG*PGWQGP
Trigger: GGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGAC...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGCAGGAGCTCCCAAACTaGAGCCCCTTTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWQELPN*SPFVPC
Trigger: GCAGGGCACAAAGGGGCTGCAGTTTGGGAGCTCCTG...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACCTGCTGAGTGTGGGGTaGACTCTGGGGCAGCCCACG +
Preference number: 4 (lower is better)
Translates to: STQLSHSKYGALHPLKAHLLSVG*TLGQPT
Trigger: CGTGGGCTGCCCCAGAGTTCACCCCACACTCAGCAG...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CACCTGGCCACTGCCCAGGTCACTCGCTGCTGCCAGGACACTCCCCCACTCAGCAGGTATGCTCGTCCTTaGCTTCCTTGGAATGACTTG +
Preference number: 4 (lower is better)
Translates to: HLATAQVTRCCQDTPPLSRYARP*LPWNDL
Trigger: CAAGTCATTCCAAGGAAGTCAAGGACGAGCATACCT...GCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGGGCCAGCGTGGGGCTTaGCTCCGCTGGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: WMEPSVSHSLTLGKNVRLGQRGA*LRWGAQ
Trigger: CTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCC...CAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGCAACACTCGCTCTTCTaGAGGCCCACAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMQHSLF*RPTAHI
Trigger: AATGTGGGCTGTGGGCCTGCAGAAGAGCGAGTGTTG...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCAGTCAGGGTGGGAGGATaGCCCGGATGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPVRVGG*PGWQGP
Trigger: GGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGAC...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGACGCCCCCGTGCCACTaGTCTCCTGACAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGTPPCH*SPDKRP
Trigger: TGGCCTCTTGTCAGGAGAGCAGTGGCACGGGGGCGT...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGCACCCACCTGGCCACTaGCCAGGTCACTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWHPPGH*PGHSLL
Trigger: CAGCAGCGAGTGACCTGGGCAGTGGCCAGGTGGGTG...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACAATCCATGGCTTCTGTaGCGGGAAGCCAGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: WRQGGRMPRMARPLNGWNNPWLL*REASLG
Trigger: TCCTAAGCTGGCTTCCCGGCACAGAAGCCATGGATT...GTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTTGGTTTGGCAGCGGGTaGGTGTGGCAGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: DAPDGKAPKWMEPSVSHSWFGSG*VWQAPH
Trigger: GTGTGGAGCCTGCCACACCCACCCGCTGCCAAACCA...AGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp AGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTGGCACTCCCACAGGATaGGTCGCACGGGAAACACCG +
Preference number: 4 (lower is better)
Translates to: RMPRMARPLNGWNQVSVTGTPTG*VARETP
Trigger: CGGTGTTTCCCGTGCGACCCATCCTGTGGGAGTGCC...AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCGTGTGGGGTGAACTCTaGGGCAGCCCACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFVWGEL*GSPRGT
Trigger: AGTGCCTCGTGGGCTGCCCCAGAGTTCACCCCACAC...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGACTAAGCTCAGAGCCTaGGGCCCGTGCTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWTKLRA*GPCFLQ
Trigger: CTGTAGAAAGCACGGGCCCCAGGCTCTGAGCTTAGT...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTCTGCTGAGTGTGGGGTaGACTCTGGGGCAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVLLSVG*TLGQPT
Trigger: CGTGGGCTGCCCCAGAGTTCACCCCACACTCAGCAG...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGCTGCAGACGCTATTCTaGAAAGCTCCTGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVLQTLF*KAPGLL
Trigger: CAACAGCCCAGGAGCTTTTCAGAATAGCGTCTGCAG...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAAAAGGCAGCTGCTGGCTaGGGTATAGAACTTCATGCC +
Preference number: 4 (lower is better)
Translates to: MASGWEDAPDGKAPKWMEKAAAG*GIELHA
Trigger: GGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTT...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCTTCCTCACGCCCCCGTaGCACTGCTCTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFFLTPP*HCSPDK
Trigger: CTTGTCAGGAGAGCAGTGGCACGGGGGCGTGAGGAA...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGAGAACTCCTCCCTGCTaGTGGACCACACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRRTPPC*WTTLTG
Trigger: TCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCT...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGTGGTTTGGCAGCGGGTaGGTGTGGCAGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWWFGSG*VWQAPH
Trigger: GTGTGGAGCCTGCCACACCCACCCGCTGCCAAACCA...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGGTAAAGGCCGTGGTTTaGCAGCGGGTGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGVKAVV*QRVGVA
Trigger: TGCCACACCCACCCGCTGCCAAACCACGGCCTTTAC...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGGCACTCCCACAGGATaGGTCGCACGGGAAACACCG +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWGTPTG*VARETP
Trigger: CGGTGTTTCCCGTGCGACCCATCCTGTGGGAGTGCC...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAAGATGGCGTCAGGGTaGGAGGATGCCCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGKMASG*EDAPDG
Trigger: GCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CCGAAGAGGAAAGATGCACCGAACCTGAACTGGTTCCAATGTAAACCCCTCCTCGGGCCCTTACCAAGGTaGGCTGCCGCCATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PKRKDAPNLNWFQCKPLLGPLPR*AAAMRS
Trigger: TGACCGCATGGCGGCAGCCCACCTTGGTAAGGGCCC...GAGGAGGGGTTTACATTGGAACCAGTTCAGGTTCGGTGCATCTTTCCTCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGACTCCTCCCTGCTGCTaGACCACACTGACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRTPPCC*TTLTGD
Trigger: ATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGT...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACGGGTCCCGAGGGGTCTaGGTCTACTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHGSRGV*VYSKVA
Trigger: GGCCACCTTGGAGTAGACCCAGACCCCTCGGGACCC...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGGGAAGAATGTTCGGTTaGATGGCGTTCACGTGGACA +
Preference number: 4 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWGRMFG*MAFTWT
Trigger: TGTCCACGTGAACGCCATTCAACCGAACATTCTTCC...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGACCACACTCCTCTTATaGGGGGTCAGAAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGTTLLL*GVRRKG
Trigger: GCCCTTCCTTCTGACCCCTCATAAGAGGAGTGTGGT...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGACCAAGGACGCGCTCTaGATGGAAACTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRTKDAL*METGSA
Trigger: AGCAGAACCAGTTTCCATTCAGAGCGCGTCCTTGGT...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGTGGGGAGAACAACTTaGTCTCCCAGGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMVGRTT*SPRAMK
Trigger: TTTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCAC...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACCAGGTCACTCGCTGCTaGCAGGACACTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHQVTRC*QDTPPL
Trigger: GAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTG...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGTGTGGGGTGAACTCTaGGGCAGCCCACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVVWGEL*GSPRGT
Trigger: AGTGCCTCGTGGGCTGCCCCAGAGTTCACCCCACAC...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAAGGCAAGGCCCCTAAATaGATGGAACCAAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: MASGWEDAPDGKAPKWMEGKAPK*MEPSVS
Trigger: ACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCC...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAAGCACCGAACCTGAACTaGTTCCAATGTAAACCCCTC +
Preference number: 4 (lower is better)
Translates to: MASGWEDAPDGKAPKWMEAPNLN*FQCKPL
Trigger: GAGGGGTTTACATTGGAACCAGTTCAGGTTCGGTGC...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACAGAGAGTCTGCTGGCTaGACTTCAGTTCCAAACGAA +
Preference number: 4 (lower is better)
Translates to: WRQGGRMPRMARPLNGWNRESAG*TSVPNE
Trigger: TTCGTTTGGAACTGAAGTCCAGCCAGCAGACTCTCT...GTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACGCCCACATTAACTACTaGGTTAAAGAGGTATGCTCG +
Preference number: 4 (lower is better)
Translates to: WRQGGRMPRMARPLNGWNAHINY*VKEVCS
Trigger: CGAGCATACCTCTTTAACTCAGTAGTTAATGTGGGC...GTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGCCCAGCCATTGTCCTTaGTCATGTGTGCTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVPSHCP*SCVLVQ
Trigger: TTGAACTAGCACACATGATCAAGGACAATGGCTGGG...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp GATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTGGATGGGGGAAGGGGTaGTATCGGAATTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DAPDGKAPKWMEPSVSHSGWGKG*YRNLGR
Trigger: TCTGCCCAAATTCCGATATCACCCCTTCCCCCATCC...AGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CACCTGGCCACTGCCCAGGTCACTCGCTGCTGCCAGGACACTCCCCCACTCAGCATTCAGTATTTCTTCTaGACTTCAGTCTACCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLATAQVTRCCQDTPPLSIQYFF*TSVYLA
Trigger: TGCAAGGTAGACTGAAGTTCAGAAGAAATACTGAAT...GCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAATCTAGCCTATCCTCGTaGACTCAGGAAGAACACTCA +
Preference number: 4 (lower is better)
Translates to: MASGWEDAPDGKAPKWMESSLSS*TQEEHS
Trigger: TGAGTGTTCTTCCTGAGTTCACGAGGATAGGCTAGA...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCAACACTCGCTCTTCTaGAGGCCCACAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: PDGKAPKWMEPSVSHSLTQHSLF*RPTAHI
Trigger: AATGTGGGCTGTGGGCCTGCAGAAGAGCGAGTGTTG...CGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAAATGTCTGCGACTGCATaGAGTCCTGTTAGCAACACT +
Preference number: 4 (lower is better)
Translates to: MASGWEDAPDGKAPKWMEMSATA*SPVSNT
Trigger: AGTGTTGCTAACAGGACTGCATGCAGTCGCAGACAT...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGAGGCCCCTAAATGGATaGAACCAAGTGTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWRPLNG*NQVSVT
Trigger: AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCT...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp ATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTCAGGCAGCTCTCGCATaGGCCCTGGGGCCCTTACCA +
Preference number: 4 (lower is better)
Translates to: MDGTKCQSLSHAWEECSVQAALA*ALGPLP
Trigger: TGGTAAGGGCCCCAGGGCCCATGCGAGAGCTGCCTG...AACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGCTCTGAATGGAAACTaGTTCTGCTGCAGACGCTAT +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMALNGN*FCCRRY
Trigger: ATAGCGTCTGCAGCAGAACCAGTTTCCATTCAGAGC...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGCTCTCACAGCAAGTATaGCGCCTTGCACCCACTGAA +
Preference number: 4 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGLSQQV*RLAPTE
Trigger: TTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAG...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGAAGATGCACCGAACCTaGACTGGTTCCAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWKMHRT*TGSNVN
Trigger: GTTTACATTGGAACCAGTTCAGGTTCGGTGCATCTT...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGGTGAGACTTTTAGGGTaGATTTTCCGAGAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRVRLLG*IFREGR
Trigger: CCGACCTTCTCGGAAAATTCACCCTAAAAGTCTCAC...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGGATCTCCCAGGGCTATaGAAGCACTGGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGDLPGL*KHWKDL
Trigger: CAGATCTTTCCAGTGCTTTCATAGCCCTGGGAGATC...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACTCAGTCAGGTTCAGCTaGCAGCTTGTGGGTATCGAG +
Preference number: 4 (lower is better)
Translates to: STQLSHSKYGALHPLKAHSVRFS*QLVGIE
Trigger: CTCGATACCCACAAGCTGTCAGCTGAACCTGACTGA...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTTCACAGTAAATGTCTaGGACTGCATGCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVFTVNV*DCMQSC
Trigger: ACAGGACTGCATGCAGTCGCAGACATTTACTGTGAA...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCACTTACCAAGGTGGGCTaGCGCCATGCGGTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPLTKVG*RHAVKD
Trigger: ATCCTTGACCGCATGGCGGCAGCCCACCTTGGTAAG...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGCTGTGGCCTCTCCAATaGTGCTCAATGTTAGATAGA +
Preference number: 4 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVLWPLQ*CSMLDR
Trigger: TCTATCTAACATTGAGCAGCATTGGAGAGGCCACAG...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGTCACTCTCTCACGCTTaGGAAGAATGTTCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMSLSHA*EECSVE
Trigger: TTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACTCTCGCATGGGCCCTaGGGCCCTTACCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSLSHGP*GPYQGG
Trigger: CCCACCTTGGTAAGGGCCCCAGGGCCCATGCGAGAG...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp CACTCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTaGCACCCACTGAAGGCTCACTGGATAGTCACCGAA +
Preference number: 4 (lower is better)
Translates to: HSTQLSHSKYGA*HPLKAHWIVTE
Trigger: TTCGGTGACTATCCAGTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGCTCCACACACTGGTaGTGTCTTCGGCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVGSTHW*CLRQKN
Trigger: GTTCTTCTGCCGAAGACATCACCAGTGTGTGGAGCC...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACGGCTCCACACACTGGTaGTGTCTTCGGCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHGSTHW*CLRQKN
Trigger: GTTCTTCTGCCGAAGACATCACCAGTGTGTGGAGCC...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGAGCCTGGGGCCCGTaGTTTCTACAGTCTACAGTA +
Preference number: 4 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGRAWGP*FLQSTV
Trigger: TACTGTAGACTGTAGAAAGCACGGGCCCCAGGCTCT...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCGAATGTTCGGTTGAATaGCGTTCACGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFECSVE*RSRGHW
Trigger: CCAGTGTCCACGTGAACGCCATTCAACCGAACATTC...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTAAGATGGCGTCAGGGTaGGAGGATGCCCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLKMASG*EDAPDG
Trigger: GCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCCGGTCACCAGAAAGATaGCGTCAGGGTGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: EPSVSHSLTLGKNVRLNGRSPER*RQGGRM
Trigger: CATCCTCCCACCCTGACGCCATCTTTCTGGTGACCG...GCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGGCTCATTTGCTAACCTaGCACATTTGGTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRAHLLT*HIWCQE
Trigger: TTCCTGACACCAAATGTGCCAGGTTAGCAAATGAGC...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCAGGACGCGCTCTGAATaGAAACTGGTTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCRTRSE*KLVLLQ
Trigger: CTGCAGCAGAACCAGTTTCCATTCAGAGCGCGTCCT...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGTACCTTGCAGTAAAGTaGGGAGAACAACTTGATCTC +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMYLAVK*GEQLDL
Trigger: GAGATCAAGTTGTTCTCCCCACTTTACTGCAAGGTA...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGTCCATAGCTCAGCTGTaGCCTCTCCAATGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWSIAQL*PLQCCS
Trigger: TGAGCAGCATTGGAGAGGCCACAGCTGAGCTATGGA...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp GTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGACACTGGGTTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VSHSLTLGKNVR*NGVHVDTGLGR
Trigger: TCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
3UTR CAA 72 bp AGGGATGTGCTCTCCACTTCCCTAATCGAAGGATGCTaGGATGGGGGAAGGGGTGATATCGGAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDVLSTSLIEGC*DGGRGDIGIWA
Trigger: TGCCCAAATTCCGATATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAGGGAAGTGGAGAGCACATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACCCCAGCCATTGTCCTTaGTCATGTGTGCTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: STQLSHSKYGALHPLKAHPSHCP*SCVLVQ
Trigger: TTGAACTAGCACACATGATCAAGGACAATGGCTGGG...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCCTAAGAACAAGAAATTaGCGATCCCACGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RMARPLNGWNQVSVTLSRLRTRN*RSHGSH
Trigger: GTGGCTTCCGTGGGATCGTCAATTTCTTGTTCTTAG...GCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGGAGAACTTGGGCCTGTaGGCCAGAGAAACTATTCTT +
Preference number: 4 (lower is better)
Translates to: PDGKAPKWMEPSVSHSLTENLGL*ARETIL
Trigger: AAGAATAGTTTCTCTGGCTCACAGGCCCAAGTTCTC...CGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp AGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTATGTCTGCGACTGCATaGAGTCCTGTTAGCAACACT +
Preference number: 4 (lower is better)
Translates to: RMPRMARPLNGWNQVSVTMSATA*SPVSNT
Trigger: AGTGTTGCTAACAGGACTGCATGCAGTCGCAGACAT...AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACAGCCCCTTTGTGCCCTaGTCTCCTCAATTACTGATT +
Preference number: 4 (lower is better)
Translates to: STQLSHSKYGALHPLKAHSPFVP*SPQLLI
Trigger: AATCAGTAATTGAGGAGAGCAGGGCACAAAGGGGCT...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCAGGTCTGACTGGAGCCTaGTCTGATCCATCCAACAGT +
Preference number: 4 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPGLTGA*SDPSNS
Trigger: ACTGTTGGATGGATCAGAGCAGGCTCCAGTCAGACC...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGGAGGGCAGATATGCCTaGAAAGTCTTCGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: PDGKAPKWMEPSVSHSLTEGRYA*KVFDLV
Trigger: GACAAGATCGAAGACTTTCCAGGCATATCTGCCCTC...CGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCACGTGGACACTGGGTTaGGTAGATGCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCTWTLG*VDAVQS
Trigger: TGATTGGACAGCATCTACCCAACCCAGTGTCCACGT...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp GATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCCTCTTTCTCTTATaGGCCTTACAGGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: DAPDGKAPKWMEPSVSHSLLFLL*ALQGCA
Trigger: AGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAG...AGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTCATATGACCTAGGGTaGCACAGGGGAGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHSYDLG*HRGDGA
Trigger: AGCTCCATCTCCCCTGTGCCACCCTAGGTCATATGA...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTCACCATTGGTGCTGCTaGGTGTGGGGTGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLHHWCC*VWGELW
Trigger: CCAGAGTTCACCCCACACTCAGCAGCACCAATGGTG...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGAGGTATGCTCGTCCTTaGCTTCCTTGGAATGACTTG +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWRYARP*LPWNDL
Trigger: CAAGTCATTCCAAGGAAGTCAAGGACGAGCATACCT...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGGGACAATTAGGGGCATaGGGAATCTACCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PTRENRRHNRKCFLHTCAGQLGA*GIYQPG
Trigger: ACCTGGCTGGTAGATTCCTCATGCCCCTAATTGTCC...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp GAGAGACAGCGATTTAGAGGCCGGTCACCAGAAAGATGGCGTCAGGGTGGGAGGATACTGTGTAATGGCTaGATTGCTGTAGAACAGACT +
Preference number: 4 (lower is better)
Translates to: ERQRFRGRSPERWRQGGRILCNG*IAVEQT
Trigger: AGTCTGTTCTACAGCAATTCAGCCATTACACAGTAT...CCTCCCACCCTGACGCCATCTTTCTGGTGACCGGCCTCTAAATCGCTGTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCCCAACCCACCTGGGGTaGATGAATGAGGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EPSVSHSLTLGKNVRLNGPTHLG*MNEVFG
Trigger: ACCAAAGACCTCATTCATTCACCCCAGGTGGGTTGG...GCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGTGGCCAAGGTCATATaGCCTAGGGTGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KCNKLLFLLWALQGCALHVAKVI*PRVAQG
Trigger: CCCCTGTGCCACCCTAGGTCATATGACCTTGGCCAC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTTTCGCACACACTaGTCCACCAGTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: RMPRMARPLNGWNQVSVTLFRTH*STSKNA
Trigger: TGCATTTTTACTGGTGGATCAGTGTGTGCGAAAGAG...AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGATGATAATCCTACATaGTCTCTAGAATTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KMASGWEDAPDGKAPKWMDDNPT*SLEFSQ
Trigger: CTGAGAGAATTCTAGAGATCATGTAGGATTATCATC...CATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS-3UTR GCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACGCAGGAGGGCAGATATaGCTGGAAAGTCTTCGATCT +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHAGGQI*LESLRS
Trigger: AGATCGAAGACTTTCCAGGCATATCTGCCCTCCTGC...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp TGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGACTGGGTTGGGTAGATaGTGTCCAATCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WMEPSVSHSLTLGKNVRLTGLGR*CPISPS
Trigger: GCTGGGACTGATTGGACAGCATCTACCCAACCCAGT...CAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTACCGAAGAGGAAAGATaGACCGAACCTGAACTGGTT +
Preference number: 4 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGTEEER*TEPELV
Trigger: AACCAGTTCAGGTTCGGTGCATCTTTCCTCTTCGGT...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGTAAAGGCCGTGGTTTaGCAGCGGGTGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KCNKLLFLLWALQGCALHVKAVV*QRVGVA
Trigger: TGCCACACCCACCCGCTGCCAAACCACGGCCTTTAC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTGAGGGCAGATATGCCTaGAAAGTCTTCGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGEGRYA*KVFDLV
Trigger: GACAAGATCGAAGACTTTCCAGGCATATCTGCCCTC...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp CCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGTCACTCTCTCACGCTTaGGAAGAATGTTCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PDGKAPKWMEPSVSHSLTSLSHA*EECSVE
Trigger: TTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA...CGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp AGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTAACCTGGCACATTTaGTGTCAGGAACAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RMPRMARPLNGWNQVSVTLTWHI*CQEQKL
Trigger: AAGCTTCTGTTCCTGACACCAAATGTGCCAGGTTAG...AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAGAGAGGGGAAATCCATaGCTTCTGTGCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSERGNP*LLCREA
Trigger: GGCTTCCCGGCACAGAAGCCATGGATTTCCCCTCTC...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACGCACATTGGTCCCCTTaGAAACTTGAGGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHAHWSP*KLEGTP
Trigger: TGGGGTGCCCTCAAGTTTCCAAGGGGACCAATGTGC...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCTGTGGGTATCGAGTTTaGCTGTGTTTGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFCGYRV*LCLVHV
Trigger: GACATGAACCAAACACAGCCAAACTCGATACCCACA...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTGCCCACATTAACTACTaGGTTAAAGAGGTATGCTCG +
Preference number: 4 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGAHINY*VKEVCS
Trigger: CGAGCATACCTCTTTAACTCAGTAGTTAATGTGGGC...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR TCA 90 bp GATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTGCTCTCCTCAATTACTaGTTTTACTTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DAPDGKAPKWMEPSVSHSALLNY*FYLVAG
Trigger: ACCAGCAACCAAGTAAAATCAGTAATTGAGGAGAGC...AGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp ATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGGAAGACTATTTCCTTaGGGAGGGGGAAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: MDGTKCQSLSHAWEECSVGRLFP*GGGRER
Trigger: TCTCTCCCTTCCCCCTCCTCAAGGAAATAGTCTTCC...AACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCCCACCTGGGGTGAATaGATGAGGTCTTTGGTTATG +
Preference number: 4 (lower is better)
Translates to: PSVSHSLTLGKNVRLNGVPTWGE*MRSLVM
Trigger: CATAACCAAAGACCTCATTCATTCACCCCAGGTGGG...AACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGCAGGAGGGCAGATATaGCTGGAAAGTCTTCGATCT +
Preference number: 4 (lower is better)
Translates to: EPSVSHSLTLGKNVRLNGAGGQI*LESLRS
Trigger: AGATCGAAGACTTTCCAGGCATATCTGCCCTCCTGC...GCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp ATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTACTGCAGCCCCTTTGTaGCCTGCTCTCCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: MDGTKCQSLSHAWEECSVTAAPL*PALLNY
Trigger: GTAATTGAGGAGAGCAGGGCACAAAGGGGCTGCAGT...AACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCAACTTCAGTCTACCTTaGAGTAAAGTGGGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RMARPLNGWNQVSVTLSRNFSLP*SKVGRT
Trigger: TGTTCTCCCCACTTTACTGCAAGGTAGACTGAAGTT...GCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTAATCCTCGTGGGTTCTaGTGTTGGTCCACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVNPRGF*CWSTQK
Trigger: TTTCTGAGTGGACCAACAGCAGAACCCACGAGGATT...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTTTGGAAGATAGTCTCTaGAGGTTGGGAAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVLEDSL*RLGKGT
Trigger: GGTTCCCTTTCCCAACCTGCAGAGACTATCTTCCAA...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGAATGTTCGGTTGAATaGCGTTCACGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: EPSVSHSLTLGKNVRLNGECSVE*RSRGHW
Trigger: CCAGTGTCCACGTGAACGCCATTCAACCGAACATTC...GCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTAGGCCCCTAAATGGATaGAACCAAGTGTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVRPLNG*NQVSVT
Trigger: AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCT...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CCA 90 bp TCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACCAAAACAAATCCTCGTaGGTTCTGCTGTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSHAWEECSVEWRSRGHQNKSS*VLLLVH
Trigger: GTGGACCAACAGCAGAACCCACGAGGATTTGTTTTG...GTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp TGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAGCCAGGACAATCGCTaGGGAAAGAGTCCAATGAAA +
Preference number: 4 (lower is better)
Translates to: WMEPSVSHSLTLGKNVRLSQDNR*GKSPMK
Trigger: TTTCATTGGACTCTTTCCTCAGCGATTGTCCTGGCT...CAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp ATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATACTGGGTTGGGTAGATaGTGTCCAATCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: MEPSVSHSLTLGKNVRLNTGLGR*CPISPS
Trigger: GCTGGGACTGATTGGACAGCATCTACCCAACCCAGT...ATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGTCCTGGGCTGTTGGCTaGTTTCATCTCAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: PTRENRRHNRKCFLHTCASWAVG*FHLSSS
Trigger: TGATGAACTGAGATGAAAGCAGCCAACAGCCCAGGA...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TCTACTCAGCTCTCTCACAGCAAGTATGGCGCCTTGCACCCACTGAAGGCTCACAGAAGAAAAACTTTATaGGCCCGAGGTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: STQLSHSKYGALHPLKAHRRKTL*ARGVNC
Trigger: ACAGTTTACACCTCGGGCGCATAAAGTTTTTCTTCT...GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCTGTGAGAGAGCTGAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGCTGGTCAAAGCCTTTaGGATATTTGGATGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVAGQSL*DIWMVS
Trigger: GCTTACCATCCAAATATCCCAAAGGCTTTGACCAGC...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGAACGAAGGCAGCTGCTaGCTGAGGTATAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PTRENRRHNRKCFLHTCANEGSC*LRYRTS
Trigger: TGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGCTGCTGGACCACACTaGCAGGAGATTTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KCNKLLFLLWALQGCALHAAGPH*QEISLH
Trigger: ATGGAGAGAAATCTCCTGTCAGTGTGGTCCAGCAGC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCCAGACTTCACAGTGTTaGTTAAATGTAACAAACTCC +
Preference number: 4 (lower is better)
Translates to: RMARPLNGWNQVSVTLSRQTSQC*LNVTNS
Trigger: GGAGTTTGTTACATTTAATCAACACTGTGAAGTCTG...GCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCGTTATAGAAGCAAAGTaGCCTGAAAAATGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCVIEAK*PEKCHQ
Trigger: TTGGTGGCATTTTTCAGGTCACTTTGCTTCTATAAC...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGTTCACAGTAAATGTCTaGGACTGCATGCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WMEPSVSHSLTLGKNVRLFTVNV*DCMQSC
Trigger: ACAGGACTGCATGCAGTCGCAGACATTTACTGTGAA...CAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCAGCCCAGAGTGGTTTTaGAGTTTTCACAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCSPEWF*SFHSKC
Trigger: ACATTTACTGTGAAAACTGCAAAACCACTCTGGGCT...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTACCAAACGAAGGCAGCTaGTGGCTGAGGTATAGAACT +
Preference number: 4 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVPNEGS*WLRYRT
Trigger: AGTTCTATACCTCAGCCAGCAGCTGCCTTCGTTTGG...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAACGTGGACACTGGGTTaGGTAGATGCTGTCCAATCA +
Preference number: 4 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVTWTLG*VDAVQS
Trigger: TGATTGGACAGCATCTACCCAACCCAGTGTCCACGT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAGTAAACCCCTCCTCCTaGGATGACCCCTACCCAGTC +
Preference number: 4 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQVNPSS*DDPYPV
Trigger: GACTGGGTAGGGGTCATCCCAGGAGGAGGGGTTTAC...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTAAGCTCCTGGGCTGTTaGCTGCTTTCATCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLKLLGC*LLSSQF
Trigger: GAACTGAGATGAAAGCAGCCAACAGCCCAGGAGCTT...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTATTCTGAAAAGCTCCTaGGCTGTTGGCTGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: PSVSHSLTLGKNVRLNGVILKSS*AVGCFH
Trigger: ATGAAAGCAGCCAACAGCCCAGGAGCTTTTCAGAAT...AACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCATCAGCTGACAGCTTGTaGGTATCGAGTTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSSADSL*VSSLAV
Trigger: CACAGCCAAACTCGATACCCACAAGCTGTCAGCTGA...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCATACAGAATCTCCCCATaGACTCATTCTTTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPYRISP*THSFVR
Trigger: TCTCACAAAAGAATGAGTTCATGGGGAGATTCTGTA...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACTTGGGGAACAAAAGTTaGTTTCTAAGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHLGNKS*FLSPHV
Trigger: GACGTGTGGGCTTAGAAATCAACTTTTGTTCCCCAA...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp CTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCCCTGGGGTGAATGAATaGGGTCTTTGGTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: LNGWNQVSVTLSRLGRMFPGVNE*GLWLCS
Trigger: AGAGCATAACCAAAGACCTCATTCATTCACCCCAGG...GAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGAATGGAAACTGGTTCTaGTGCAGACGCTATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PTRENRRHNRKCFLHTCANGNWF*CRRYSE
Trigger: TTCAGAATAGCGTCTGCAGCAGAACCAGTTTCCATT...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp ATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTAGGCACAATCGAAAGTaGTTTTTACACACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: MDGTKCQSLSHAWEECSVRHNRK*FLHTCA
Trigger: CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCT...AACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACGGTGATATCGGAATTTaGGCAGAACTCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCNKLLFLLWALQGCALHGDIGI*AELLPA
Trigger: AGCAGGGAGGAGTTCTGCCCAAATTCCGATATCACC...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGATTTCATTGAGAACTTaGGCCTGTGAGCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PTRENRRHNRKCFLHTCAISLRT*ACEPEK
Trigger: TTTCTCTGGCTCACAGGCCCAAGTTCTCAATGAAAT...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCAGAACAGTGGCACATTaGTCCCCTTGGAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: LNGWNQVSVTLSRLGRMFRTVAH*SPWKLE
Trigger: CTCAAGTTTCCAAGGGGACCAATGTGCCACTGTTCT...GAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTCGTGGGTTCTGCTGTTaGTCCACTCAGAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLRGFCC*STQKQK
Trigger: TTTCTGTTTCTGAGTGGACCAACAGCAGAACCCACG...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGATGTTTAACATGATGTaGCTTCTAAAACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWMFNMM*LLKQLE
Trigger: CTCCAGCTGTTTTAGAAGCCACATCATGTTAAACAT...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp GGCCACATCTTGTGCTCATTTGCTAACCTGGCACATTaGGTGTCAGGAACAGAAGCTTCTAGTCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GHILCSFANLAH*VSGTEASSQRE
Trigger: TTCTCTCTGACTAGAAGCTTCTGTTCCTGACACCAAATGTGCCAGGTTAGCAAATGAGCACAAGATGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp GGTCAAAGCCTTTGGGATATTTGGATGGTAAGCCCATaGCAAACAGCAGTCCCTTCACACCTTATCTACGGT +
Preference number: 4 (lower is better)
Translates to: GQSLWDIWMVSP*QTAVPSHLIYG
Trigger: ACCGTAGATAAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp TGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAGCCCAGAGTGGTTTTaGAGTTTTCACAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: WMEPSVSHSLTLGKNVRLSPEWF*SFHSKC
Trigger: ACATTTACTGTGAAAACTGCAAAACCACTCTGGGCT...CAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR GCA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAAATGCAGAGAGGCATTaGTTCAAAGCCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSNAERH*FKALIQ
Trigger: CTGGATCAAGGCTTTGAAGCAATGCCTCTCTGCATT...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTACACCTTATCTACGGTaGCTAGAGGCAAAGATGATG +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLTPYLR*LEAKMM
Trigger: CATCATCTTTGCCTCTAGCCACCGTAGATAAGGTGT...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAACCCAAGGAAGAACAGTaGCACATTGGTCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQPKEEQ*HIGPLG
Trigger: TCCAAGGGGACCAATGTGCCACTGTTCTTCCTTGGG...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp CAGTCAGGTTCAGCTGACAGCTTGTGGGTATCGAGTTaGGCTGTGTTTGGTTCATGTCAAATCAATCCATCA +
Preference number: 4 (lower is better)
Translates to: QSGSADSLWVSS*AVFGSCQINPS
Trigger: TGATGGATTGATTTGACATGAACCAAACACAGCCAAACTCGATACCCACAAGCTGTCAGCTGAACCTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACGAGGAAAGAGTCCAATaGAAATCCATAAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHEERVQ*KSIKED
Trigger: GTCTTCCTTTATGGATTTTCATTGGACTCTTTCCTC...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR GCA 90 bp ATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATCTGATTTTACTTGGTTaGTGGTCAAAGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: MEPSVSHSLTLGKNVRLNLILLG*WSKPLG
Trigger: TCCCAAAGGCTTTGACCAGCAACCAAGTAAAATCAG...ATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CCCCCTGTAGTTATGGAAAAACCAACACTCTACTCAGCTCTCTCACAGCAAGTAAGCCTTTGGGATATTTaGATGGTAAGCCCATTGCAA +
Preference number: 4 (lower is better)
Translates to: PPVVMEKPTLYSALSQQVSLWDI*MVSPLQ
Trigger: TTGCAATGGGCTTACCATCCAAATATCCCAAAGGCT...TACTTGCTGTGAGAGAGCTGAGTAGAGTGTTGGTTTTTCCATAACTACAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAGGGTCTACTCCAAGGTaGCCAAGGTCATATGACCTA +
Preference number: 4 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQGSTPR*PRSYDL
Trigger: TAGGTCATATGACCTTGGCCACCTTGGAGTAGACCC...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AACGAAGGCAGCTGCTGGCTGAGGTATAGAACTTCATGCCTTTTCCTTTCTCACTTTCAATTCTCAACCTaGTTAATGTACTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NEGSCWLRYRTSCLFLSHFQFST*LMYCRV
Trigger: GACTCTGCAGTACATTAATCAGGTTGAGAATTGAAA...GTGAGAAAGGAAAAGGCATGAAGTTCTATACCTCAGCCAGCAGCTGCCTTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp GAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCAACCCCATTTTCTTATaGGAAGGACTATCAATAAAC +
Preference number: 4 (lower is better)
Translates to: EPSVSHSLTLGKNVRLNGNPIFL*EGLSIN
Trigger: GTTTATTGATAGTCCTTCCCATAAGAAAATGGGGTT...GCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATAGACAGATTCTGTATTaGAAGATAGTCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MEPSVSHSLTLGKNVRLNRQILY*KIVSAG
Trigger: ACCTGCAGAGACTATCTTCCAATACAGAATCTGTCT...ATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAATGCTCTCAGGGGATCTaGGAAAACAGCACCAAATAT +
Preference number: 4 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQCSQGI*ENSTKY
Trigger: ATATTTGGTGCTGTTTTCTCAGATCCCCTGAGAGCA...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR TCA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACACAGTCTGTAAAAACTaGGCACGCAAAGCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KCNKLLFLLWALQGCALHTVCKN*ARKARK
Trigger: TTTTCTTGCTTTGCGTGCTCAGTTTTTACAGACTGT...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp CTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCACACCTTATTTTACTTGGTTGCTaGTCAAAGCCTTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: LWDIWMVSPLQTAVPSHLILLGC*SKPLGY
Trigger: ATATCCCAAAGGCTTTGACCAGCAACCAAGTAAAAT...AAGGTGTGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
3UTR CAA 72 bp CAATTACTGATTTTACTTGGTTGCTGGTCAAAGCCTTaGGGATATTTGGATGGTAAGCCCATTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: QLLILLGCWSKP*GYLDGKPIANS
Trigger: GCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTGACCAGCAACCAAGTAAAATCAGTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CCA 90 bp ACTCTCATCTCAGTTAGAAGCACAGATTTGACTCTGCTCCATCTTCACAAACAAATTACTGATTTTACTTaGTTGCTGGTCAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TLISVRSTDLTLLHLHKQITDFT*LLVKAF
Trigger: AAAGGCTTTGACCAGCAACCAAGTAAAATCAGTAAT...TTGTTTGTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAACTGAGATGAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS CCA 90 bp TCAGCAGCCCGGCGACAGGCGGCCCTGTCCGGCCAGCGTGGGGCTTaGCTCCGCTGGGGTGCGCAGCGGCGAAGCGCGGCCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SAARRQAALSGQRGA*LRWGAQRRSAARLG
Trigger: CCCCAGCCGGGCCGCGCTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGGGCCGCCTGTCGCCGGGCTGCTGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000582192.1
CDS CCA 90 bp TGGAATGACCGGCGACAGGCGGCCCTGTCCGGCCAGCGTGGGGCTTaGCTCCGCTGGGGTGCGCAGCGGCGAAGCGCGGCCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: WNDRRQAALSGQRGA*LRWGAQRRSAARLG
Trigger: CCCCAGCCGGGCCGCGCTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGGGCCGCCTGTCGCCGGTCATTCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581865.1
CDS CCA 90 bp CTAGTTCTCAGCAGCCCGGCGACAGGCGGCCCTGTCCGGCCAGCGTaGGGCTTGGCTCCGCTGGGGTGCGCAGCGGCGAAGCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: LVLSSPATGGPVRPA*GLAPLGCAAAKRGP
Trigger: CGGGCCGCGCTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGGGCCGCCTGTCGCCGGGCTGCTGAGAACTAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000582192.1
CDS CCA 90 bp GTGTGGGGTGAACTCTGGGGCAGCCCACGAGGCACTCCCACAGGATaGGTCGCACGGGAAACACCGGAAGACACAGGTAAAGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: VWGELWGSPRGTPTG*VARETPEDTGKGRG
Trigger: ACCACGGCCTTTACCTGTGTCTTCCGGTGTTTCCCGTGCGACCCATCCTGTGGGAGTGCCTCGTGGGCTGCCCCAGAGTTCACCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
CDS-3UTR CAA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGGGTAAAGGCCGTGGTTaGGCAGCGGGTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVGKGRG*AAGGCG
Trigger: GCCACACCCACCCGCTGCCAAACCACGGCCTTTACC...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS TCA 90 bp TCTTCGATCTTGTCATCTTCACCATTGGTGCTGCTGAGTGTGGGGTaGACTCTGGGGCAGCCCACGAGGCACTCCCACAGGATGGGTCGC +
Preference number: 5 (lower is better)
Translates to: SSILSSSPLVLLSVG*TLGQPTRHSHRMGR
Trigger: GCGACCCATCCTGTGGGAGTGCCTCGTGGGCTGCCCCAGAGTTCACCCCACACTCAGCAGCACCAATGGTGAAGATGACAAGATCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS-3UTR CAA 90 bp ATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATCGGCCAGCGTGGGGCTaGGCTCCGCTGGGGTGCGCA +
Preference number: 5 (lower is better)
Translates to: MEPSVSHSLTLGKNVRLNRPAWG*APLGCA
Trigger: TGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCG...ATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CACCTGGCCACTGCCCAGGTCACTCGCTGCTGCCAGGACACTCCCCCACTCAGCTCTAAGAACAAGAAATaGACGATCCCACGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HLATAQVTRCCQDTPPLSSKNKK*TIPRKP
Trigger: TGGCTTCCGTGGGATCGTCAATTTCTTGTTCTTAGA...GCTGAGTGGGGGAGTGTCCTGGCAGCAGCGAGTGACCTGGGCAGTGGCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp GGGAGCACTCTTCACTCTTCGTCCGCCAACCTAAACCAAGCAAGCTaGGAACAAGGCTCCCATCAATCCCCAGCCCCTCCCTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GSTLHSSSANLNQAS*EQGSHQSPAPPFSG
Trigger: GCCAGAGAAGGGAGGGGCTGGGGATTGATGGGAGCCTTGTTCTCAGCTTGCTTGGTTTAGGTTGGCGGACGAAGAGTGAAGAGTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 90 bp GAGAACAAGGCTCCCATCAATCCCCAGCCCCTCCCTTCTCTGGCTTaGAAGCTGCCAGCTCCCAAAGCCTCCAACAAGGATGACACCTCA +
Preference number: 5 (lower is better)
Translates to: ENKAPINPQPLPSLA*KLPAPKASNKDDTS
Trigger: TGAGGTGTCATCCTTGTTGGAGGCTTTGGGAGCTGGCAGCTTGCAAGCCAGAGAAGGGAGGGGCTGGGGATTGATGGGAGCCTTGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGTAAAGGCCGTGGTTaGGCAGCGGGTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVGKGRG*AAGGCG
Trigger: GCCACACCCACCCGCTGCCAAACCACGGCCTTTACC...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp ATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAAGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGAC +
Preference number: 5 (lower is better)
Translates to: MASGWEDAPDGKAPKWMEGKNVR*NGVHVD
Trigger: GTCCACGTGAACGCCATTCAACCGAACATTCTTCCC...TTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp TGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACTGGATGGTAAGCCCATaGCAAACAGCAGTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: WRQGGRMPRMARPLNGWNWMVSP*QTAVPS
Trigger: TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCA...GTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp AAATCAATCCATCAGCAGCCTGAGACTAATGTCCCGGGTCCCGAGGGGTCTGGGCTAAGCCCACACGTCTaGGGGCTCCCATTCCACCAT +
Preference number: 5 (lower is better)
Translates to: KSIHQQPETNVPGPEGSGLSPHV*GLPFHH
Trigger: ATGGTGGAATGGGAGCCCCAAGACGTGTGGGCTTAG...CCCAGACCCCTCGGGACCCGGGACATTAGTCTCAGGCTGCTGATGGATTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp TGCCTGGAAAGTCTTCGATCTTGTCATCTTCACCATTGGTGCTGCTaGGTGTGGGGTGAACTCTGGGGCAGCCCACGAGGCACTCCCACA +
Preference number: 5 (lower is better)
Translates to: CLESLRSCHLHHWCC*VWGELWGSPRGTPT
Trigger: TGTGGGAGTGCCTCGTGGGCTGCCCCAGAGTTCACCCCACACTCAGCAGCACCAATGGTGAAGATGACAAGATCGAAGACTTTCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS GCA 90 bp AGGCTCCCATCAATCCCCAGCCCCTCCCTTCTCTGGCTTGCAAGCTaGCAGCTCCCAAAGCCTCCAACAAGGATGACACCTCATTTCCAA +
Preference number: 5 (lower is better)
Translates to: RLPSIPSPSLLWLAS*QLPKPPTRMTPHFQ
Trigger: TTGGAAATGAGGTGTCATCCTTGTTGGAGGCTTTGGGAGCTGGCAGCTTGCAAGCCAGAGAAGGGAGGGGCTGGGGATTGATGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp GATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTAGCAAGTATGGCGCCTaGCACCCACTGAAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: DAPDGKAPKWMEPSVSHSSKYGA*HPLKAH
Trigger: GTGAGCCTTCAGTGGGTGCAAGGCGCCATACTTGCT...AGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp TTCTCTTCCCCTGGGAATCTAGGGCCAGGAGGGAAGCAGTTCCCCTaGGAACGCTCCCTGAAGGATCCATTTCCTGAACTGCACAACTGG +
Preference number: 5 (lower is better)
Translates to: FSSPGNLGPGGKQFP*ERSLKDPFPELHNW
Trigger: CCAGTTGTGCAGTTCAGGAAATGGATCCTTCAGGGAGCGTTCTCAGGGGAACTGCTTCCCTCCTGGCCCTAGATTCCCAGGGGAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGCACGTGGACACTGGGTaGGGTAGATGCTGTCCAATC +
Preference number: 5 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGHVDTG*GRCCPI
Trigger: GATTGGACAGCATCTACCCAACCCAGTGTCCACGTG...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp AGAAAGATGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGAATCAGGGCCACATCTaGTGCTCATTTGCTAACCTG +
Preference number: 5 (lower is better)
Translates to: RKMASGWEDAPDGKAPKWNQGHI*CSFANL
Trigger: CAGGTTAGCAAATGAGCACAAGATGTGGCCCTGATT...CCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp AGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTAGGAGAACCAGGCCCTaGCCCCACCAACTAGAATCA +
Preference number: 5 (lower is better)
Translates to: RMPRMARPLNGWNQVSVTRRTRP*PHQLES
Trigger: TGATTCTAGTTGGTGGGGCAAGGGCCTGGTTCTCCT...AGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CGGAATTTGGGCAGAACTCCTCCCTGCTGCTGGACCACACTGACAGGAGATTTCCAAACTGCAGCCCCTTaGTGCCCTGCTCTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: RNLGRTPPCCWTTLTGDFQTAAP*CPALLN
Trigger: ATTGAGGAGAGCAGGGCACAAAGGGGCTGCAGTTTG...GAAATCTCCTGTCAGTGTGGTCCAGCAGCAGGGAGGAGTTCTGCCCAAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTTGTCATCTTCACCATaGGTGCTGCTGAGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGLSSSP*VLLSVG
Trigger: CCCCACACTCAGCAGCACCAATGGTGAAGATGACAA...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp CAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGGGAAAGTCTTCGATCTaGTCATCTTCACCATTGGTG +
Preference number: 5 (lower is better)
Translates to: QGGRMPRMARPLNGWNQVGKSSI*SSSPLV
Trigger: CACCAATGGTGAAGATGACAAGATCGAAGACTTTCC...CACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS GCA 90 bp TCTGCAGTGAATGCAGCTGTAGGTCCGGTGGCAGGAGGGCAGATATaGCTGGAAAGTCTTCGATCTTGTCATCTTCACCATTGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SAVNAAVGPVAGGQI*LESLRSCHLHHWCC
Trigger: GCAGCACCAATGGTGAAGATGACAAGATCGAAGACTTTCCAGGCATATCTGCCCTCCTGCCACCGGACCTACAGCTGCATTCACTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS-3UTR CAA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGTTGTCATCTTCACCATaGGTGCTGCTGAGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWLSSSP*VLLSVG
Trigger: CCCCACACTCAGCAGCACCAATGGTGAAGATGACAA...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCACACGTGGACACTGGGTaGGGTAGATGCTGTCCAATC +
Preference number: 5 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPHVDTG*GRCCPI
Trigger: GATTGGACAGCATCTACCCAACCCAGTGTCCACGTG...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCTGTCCAAGGAGCGGCGCAATTTaGTTCCTACCTCCACCCTTC +
Preference number: 5 (lower is better)
Translates to: NVRLNGVHVDTGLGRCCPRSGAI*FLPPPF
Trigger: GAAGGGTGGAGGTAGGAACAAAATTGCGCCGCTCCT...TGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp TGGCGTCAGGGTGGGAGGATGCCCCGGATGGCAAGGCCCCTAAATGGATGGAACCGTGATTCTGATTTGTaGGAAATTCTTCCAACAGGA +
Preference number: 5 (lower is better)
Translates to: WRQGGRMPRMARPLNGWNRDSDL*EILPTG
Trigger: TCCTGTTGGAAGAATTTCCAACAAATCAGAATCACG...GTTCCATCCATTTAGGGGCCTTGCCATCCGGGGCATCCTCCCACCCTGACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGATGCAGGGTCTAGTCTaGGTTTCGGGGGCTTATACG +
Preference number: 5 (lower is better)
Translates to: LSHAWEECSVEWRSRGHWMQGLV*VSGAYT
Trigger: CGTATAAGCCCCCGAAACCAAGACTAGACCCTGCAT...CCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS CCA 90 bp CACATGATAGCACAGTGTGGTCCTGATACAGGAATGAGTGATCCCTaGGTGCTGAATAGGCTCTACTCCTTCACAGGGTGCCCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: HMIAQCGPDTGMSDP*VLNRLYSFTGCPAQ
Trigger: TTGAGCTGGGCACCCTGTGAAGGAGTAGAGCCTATTCAGCACCCAGGGATCACTCATTCCTGTATCAGGACCACACTGTGCTATCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS CCA 90 bp AGGCACAGAGCCCTGAAACACCCATACCTGCATATTCAGGCGATGTaGCTTGGTTCCAAGTGGCTGAAACAAAGTGAAGAGCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RHRALKHPYLHIQAM*LGSKWLKQSEELAG
Trigger: TCCAGCCAGCTCTTCACTTTGTTTCAGCCACTTGGAACCAAGCCACATCGCCTGAATATGCAGGTATGGGTGTTTCAGGGCTCTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp CCGAAGAGGAAAGATGCACCGAACCTGAACTGGTTCCAATGTAAACCCCTCCTCCTAATCGAAGGATGCTaGGATGGGGGAAGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: PKRKDAPNLNWFQCKPLLLIEGC*DGGRGD
Trigger: ATCACCCCTTCCCCCATCCAAGCATCCTTCGATTAG...GAGGAGGGGTTTACATTGGAACCAGTTCAGGTTCGGTGCATCTTTCCTCTTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp CCAATGAAATTGAAGCCTGTGCTGACTTTGGCCTGGACTTGTGAATaGGCCTTTCTGCCCCAAAAGGGACAGGAAGGACATGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: PMKLKPVLTLAWTCE*AFLPQKGQEGHEAN
Trigger: GTTGGCCTCATGTCCTTCCTGTCCCTTTTGGGGCAGAAAGGCTCATTCACAAGTCCAGGCCAAAGTCAGCACAGGCTTCAATTTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 90 bp GAGAGGACTGTTCTACAAGAGCTGACTAGATCCTTCATTCCTCTCTaGCTGGGGCTACCAAACCAGAGGCAAAGAAAGCAACAGCCACCT +
Preference number: 5 (lower is better)
Translates to: ERTVLQELTRSFIPL*LGLPNQRQRKQQPP
Trigger: AGGTGGCTGTTGCTTTCTTTGCCTCTGGTTTGGTAGCCCCAGCCAGAGAGGAATGAAGGATCTAGTCAGCTCTTGTAGAACAGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp CCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTGGGAAGAATGTTCGGTaGAATGGCGTTCACGTGGAC +
Preference number: 5 (lower is better)
Translates to: PSVSHSLTLGKNVRLNGVGKNVR*NGVHVD
Trigger: GTCCACGTGAACGCCATTCAACCGAACATTCTTCCC...AACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp CACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGCTTGGGGAACAAAAGTaGATTTCTAAGCCCACACGT +
Preference number: 5 (lower is better)
Translates to: HAWEECSVEWRSRGHWVGLGEQK*ISKPTR
Trigger: ACGTGTGGGCTTAGAAATCAACTTTTGTTCCCCAAG...CCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CGGATGGCAAGGCCCCTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCGTTAGAAGCACAGATTaGACTCTGCTCCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: RMARPLNGWNQVSVTLSRVRSTD*TLLHLH
Trigger: GTGAAGATGGAGCAGAGTCAAATCTGTGCTTCTAAC...GCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAGGGGCCTTGCCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CCCACTCGAGAAAACAGGAGGCACAATCGAAAGTGCTTTTTACACACGTGTGCGGCTAACCTGGCACATTaGGTGTCAGGAACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: PTRENRRHNRKCFLHTCAANLAH*VSGTEA
Trigger: AGCTTCTGTTCCTGACACCAAATGTGCCAGGTTAGC...CGCACACGTGTGTAAAAAGCACTTTCGATTGTGCCTCCTGTTTTCTCGAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp GGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTAGATGCAAGCCTTTGGGATATTaGGATGGTAAGCCCATTGCA +
Preference number: 5 (lower is better)
Translates to: GKNVRLNGVHVDTGLGRCKPLGY*DGKPIA
Trigger: TGCAATGGGCTTACCATCCAAATATCCCAAAGGCTT...GCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp ACGTGGGTCAGCCCTCCCTGTACAAAGATGGAGTACAAATATTCTTaGGAGCTTGTAAACCTCTGCAACTTCAGGAGCACTAAGCGCCCT +
Preference number: 5 (lower is better)
Translates to: TWVSPPCTKMEYKYS*ELVNLCNFRSTKRP
Trigger: AGGGCGCTTAGTGCTCCTGAAGTTGCAGAGGTTTACAAGCTCTCAAGAATATTTGTACTCCATCTTTGTACAGGGAGGGCTGACCCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 90 bp CCTGGAGTAAGGCTAGAACAAGAGGTTCGGTCCTCAGGCCCGATTTaGAAAGCCTCACTACTACAGATGTGTTTGTTTGGGCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGVRLEQEVRSSGPI*KASLLQMCLFGQLS
Trigger: AGAAAGCTGCCCAAACAAACACATCTGTAGTAGTGAGGCTTTTCAAATCGGGCCTGAGGACCGAACCTCTTGTTCTAGCCTTACTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 90 bp CCTTTAAATCATCAAGCTCTAATGCACCCCATCTGTGTACCGGCCTaGGCCAATGAAATTGAAGCCTGTGCTGACTTTGGCCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: PLNHQALMHPICVPA*ANEIEACADFGLDL
Trigger: CAAGTCCAGGCCAAAGTCAGCACAGGCTTCAATTTCATTGGCTCAGGCCGGTACACAGATGGGGTGCATTAGAGCTTGATGATTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 90 bp GGCTCTCTCATCTTGCTAAGGAACCCCTCTTACAAGACATTCCCCTaGTTTATCAGAATTCACCTTCTGAGCAGGGAGCACTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: GSLILLRNPSYKTFP*FIRIHLLSREHSSL
Trigger: GAGTGAAGAGTGCTCCCTGCTCAGAAGGTGAATTCTGATAAAGCAGGGGAATGTCTTGTAAGAGGGGTTCCTTAGCAAGATGAGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 90 bp TTCCAAGGAGGAGGCTGGGGCAATGATCTTTCCATTAGGCAGACCTaGATAAGAATCTATAGATTATTTAACGCCGGGGGTGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: FQGGGWGNDLSIRQT*IRIYRLFNAGGGCG
Trigger: TCCACAGCCACCCCCGGCGTTAAATAATCTATAGATTCTTATGCAGGTCTGCCTAATGGAAAGATCATTGCCCCAGCCTCCTCCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGAAAGTCTTCGATCTaGTCATCTTCACCATTGGTG +
Preference number: 5 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVGKSSI*SSSPLV
Trigger: CACCAATGGTGAAGATGACAAGATCGAAGACTTTCC...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000585166.1
CDS-3UTR CAA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAGGTTCAGCTGACAGCTaGTGGGTATCGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSGSADS*WVSSLA
Trigger: AGCCAAACTCGATACCCACAAGCTGTCAGCTGAACC...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp TCTCACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTAAATGCAGAGAGGCATaGCTTCAAAGCCTTGATCCA +
Preference number: 5 (lower is better)
Translates to: SHAWEECSVEWRSRGHWVKCREA*LQSLDP
Trigger: TGGATCAAGGCTTTGAAGCAATGCCTCTCTGCATTT...AACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS GCA 90 bp ATGAGTGATCCCTGGGTGCTGAATAGGCTCTACTCCTTCACAGGGTaGCCAGCTCAAGCCACAGGCCAGATTTTCATTTTTACAGTTTAT +
Preference number: 5 (lower is better)
Translates to: MSDPWVLNRLYSFTG*PAQATGQIFIFTVY
Trigger: ATAAACTGTAAAAATGAAAATCTGGCCTGTGGCTTGAGCTGGGCACCCTGTGAAGGAGTAGAGCCTATTCAGCACCCAGGGATCACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS-3UTR CAA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAAGAAGGTCGGCCTACTaGGAGGAGATGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSRRSAY*EEMLRI
Trigger: AATTCTCAGCATCTCCTCCAAGTAGGCCGACCTTCT...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCAAGTGGGGAGAACAACTaGATCTCCCAGGGCTATGAA +
Preference number: 5 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSSGENN*ISQGYE
Trigger: TTCATAGCCCTGGGAGATCAAGTTGTTCTCCCCACT...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp ATTCTTCTGATCATGATCAAATGTCATGCCATATTACCTCATGTATaGGCCCTAACGGCCCCCACAGGCCAGAAGGTCAGCTCTTCAACA +
Preference number: 5 (lower is better)
Translates to: ILLIMIKCHAILPHV*ALTAPTGQKVSSST
Trigger: TGTTGAAGAGCTGACCTTCTGGCCTGTGGGGGCCGTTAGGGCTCATACATGAGGTAATATGGCATGACATTTGATCATGATCAGAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 90 bp GGGTTCCCCAAAATTCGAAGGGAAGCTGAGAAGGAAGCTAAAGGCTaGCTGAAACATAAGCAGCATAAAGGAGAGGAATTAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: GFPKIRREAEKEAKG*LKHKQHKGEELAEP
Trigger: TGGTTCTGCTAATTCCTCTCCTTTATGCTGCTTATGTTTCAGCCAGCCTTTAGCTTCCTTCTCAGCTTCCCTTCGAATTTTGGGGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp ACGCTTGGGAAGAATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTTGGGTGATTGTGTTCAAGATTaGATTTCTCAGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TLGKNVRLNGVHVDTGLGDCVQD*ISQPLS
Trigger: AGAAAGAGGCTGAGAAATCAAATCTTGAACACAATC...ACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATTCTTCCCAAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp TGTCTTCTCCAAGGCTCAACCTCCATCTATTCATTTATCATTTACTaGGCTCTTGCCATGGGTCAGGTTCTGACCCCGAGATGTAAAGCA +
Preference number: 5 (lower is better)
Translates to: CLLQGSTSIYSFIIY*ALAMGQVLTPRCKA
Trigger: TGCTTTACATCTCGGGGTCAGAACCTGACCCATGGCAAGAGCTCAGTAAATGATAAATGAATAGATGGAGGTTGAGCCTTGGAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp CAAAGCCTTTGGGATATTTGGATGGTAAGCCCATTGCAAACAGCAGTCCCTTCATGCTGGTCAAAGCCTTaGGGATATTTGGATGGTAAG +
Preference number: 5 (lower is better)
Translates to: QSLWDIWMVSPLQTAVPSCWSKP*GYLDGK
Trigger: CTTACCATCCAAATATCCCAAAGGCTTTGACCAGCA...TGAAGGGACTGCTGTTTGCAATGGGCTTACCATCCAAATATCCCAAAGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS GCA 90 bp TACAAAGTATCATTTAATTACACTGCTGATCCAGCTCCAGTTATCTaGTTCCCAGCTCCTAACTCCCACTGGGCAGATTCTGAAACTGCA +
Preference number: 5 (lower is better)
Translates to: YKVSFNYTADPAPVI*FPAPNSHWADSETA
Trigger: TGCAGTTTCAGAATCTGCCCAGTGGGAGTTAGGAGCTGGGAAGCAGATAACTGGAGCTGGATCAGCAGTGTAATTAAATGATACTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS-3UTR CAA 90 bp AAATGTAACAAACTCCTCTTTCTCTTATGGGCCTTACAGGGATGTGCTCTCCACACTGATTTTACTTGGTaGCTGGTCAAAGCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: KCNKLLFLLWALQGCALHTDFTW*LVKAFG
Trigger: CCCAAAGGCTTTGACCAGCAACCAAGTAAAATCAGT...GTGGAGAGCACATCCCTGTAAGGCCCATAAGAGAAAGAGGAGTTTGTTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS-3UTR CAA 90 bp CTAAATGGATGGAACCAAGTGTCAGTCACTCTCTCACGCTTGGGAAGAATGTTCCGAGTTTGGCTGTGTTaGGTTCATGTCAAATCAATC +
Preference number: 5 (lower is better)
Translates to: LNGWNQVSVTLSRLGRMFRVWLC*VHVKSI
Trigger: GATTGATTTGACATGAACCAAACACAGCCAAACTCG...GAACATTCTTCCCAAGCGTGAGAGAGTGACTGACACTTGGTTCCATCCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312655.9
CDS TCA 90 bp GTCAAAGGCCTTGTATGCCAGGCCAAACAGATAAGACATAAATTCTaGAGGCCATTACCATCTCCACATACTCAACTTCTGCCCATCTTA +
Preference number: 5 (lower is better)
Translates to: VKGLVCQAKQIRHKF*RPLPSPHTQLLPIL
Trigger: TAAGATGGGCAGAAGTTGAGTATGTGGAGATGGTAATGGCCTTCAGAATTTATGTCTTATCTGTTTGGCCTGGCATACAAGGCCTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 90 bp CTAGTCTTGGTTTCGGGGGCTTATACGTCAGATGATAATCCTACATaGTCTCTAGAATTCTCTCAGCCTTTAAAGTCCTGGTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: LVLVSGAYTSDDNPT*SLEFSQPLKSWFHV
Trigger: TACATGGAACCAGGACTTTAAAGGCTGAGAGAATTCTAGAGATCATGTAGGATTATCATCTGACGTATAAGCCCCCGAAACCAAGACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS CAA 90 bp CTCAGCAGCCCGGCGACAGGCGGCCCTGTCCGGCCAGCGTGGGGCTaGGCTCCGCTGGGGTGCGCAGCGGCGAAGCGCGGCCCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LSSPATGGPVRPAWG*APLGCAAAKRGPAG
Trigger: CCCAGCCGGGCCGCGCTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGGGCCGCCTGTCGCCGGGCTGCTGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000582192.1
CDS CCA 72 bp AGCAGCCCGGCGACAGGCGGCCCTGTCCGGCCAGCGTaGGGCTTGGCTCCGCTGGGGTGCGCAGCGGCGAAG +
Preference number: 6 (lower is better)
Translates to: SSPATGGPVRPA*GLAPLGCAAAK
Trigger: CTTCGCCGCTGCGCACCCCAGCGGAGCCAAGCCCCACGCTGGCCGGACAGGGCCGCCTGTCGCCGGGCTGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312655.9
ENST00000582192.1
CDS CCA 72 bp GAACTCTGGGGCAGCCCACGAGGCACTCCCACAGGATaGGTCGCACGGGAAACACCGGAAGACACAGGTAAA +
Preference number: 6 (lower is better)
Translates to: ELWGSPRGTPTG*VARETPEDTGK
Trigger: TTTACCTGTGTCTTCCGGTGTTTCCCGTGCGACCCATCCTGTGGGAGTGCCTCGTGGGCTGCCCCAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS GCA 72 bp TCAATCCCCAGCCCCTCCCTTCTCTGGCTTGCAAGCTaGCAGCTCCCAAAGCCTCCAACAAGGATGACACCT +
Preference number: 6 (lower is better)
Translates to: SIPSPSLLWLAS*QLPKPPTRMTP
Trigger: AGGTGTCATCCTTGTTGGAGGCTTTGGGAGCTGGCAGCTTGCAAGCCAGAGAAGGGAGGGGCTGGGGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp AGTCTTCGATCTTGTCATCTTCACCATTGGTGCTGCTaGGTGTGGGGTGAACTCTGGGGCAGCCCACGAGGC +
Preference number: 6 (lower is better)
Translates to: SLRSCHLHHWCC*VWGELWGSPRG
Trigger: GCCTCGTGGGCTGCCCCAGAGTTCACCCCACACTCAGCAGCACCAATGGTGAAGATGACAAGATCGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS TCA 72 bp CTTCACTCTTCGTCCGCCAACCTAAACCAAGCAAGCTaGGAACAAGGCTCCCATCAATCCCCAGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LHSSSANLNQAS*EQGSHQSPAPP
Trigger: GGGAGGGGCTGGGGATTGATGGGAGCCTTGTTCTCAGCTTGCTTGGTTTAGGTTGGCGGACGAAGAGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp GGCCAGGAGGGAAGCAGTTCCCCTGAGAACGCTCCCTaGAGGATCCATTTCCTGAACTGCACAACTGGCATG +
Preference number: 6 (lower is better)
Translates to: GQEGSSSPENAP*RIHFLNCTTGM
Trigger: CATGCCAGTTGTGCAGTTCAGGAAATGGATCCTTCAGGGAGCGTTCTCAGGGGAACTGCTTCCCTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp CCTGGGAATCTAGGGCCAGGAGGGAAGCAGTTCCCCTaGGAACGCTCCCTGAAGGATCCATTTCCTGAACTG +
Preference number: 6 (lower is better)
Translates to: PGNLGPGGKQFP*ERSLKDPFPEL
Trigger: CAGTTCAGGAAATGGATCCTTCAGGGAGCGTTCTCAGGGGAACTGCTTCCCTCCTGGCCCTAGATTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp ACTACTCTGTCCCTCCAACTCAGAGTTTTTCTCAGTTaGGTGAGACGGTCACGTGGGTCAGCCCTCCCTGTA +
Preference number: 6 (lower is better)
Translates to: TTLSLQLRVFLS*VRRSRGSALPV
Trigger: TACAGGGAGGGCTGACCCACGTGACCGTCTCACTCAACTGAGAAAAACTCTGAGTTGGAGGGACAGAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 72 bp CCCTGGGTGCTGAATAGGCTCTACTCCTTCACAGGGTaGCCAGCTCAAGCCACAGGCCAGATTTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: PWVLNRLYSFTG*PAQATGQIFIF
Trigger: AAAAATGAAAATCTGGCCTGTGGCTTGAGCTGGGCACCCTGTGAAGGAGTAGAGCCTATTCAGCACCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS CCA 72 bp TCAGGCATTCAAGCTGAGCTTCCAGCAAAAATTAACTaGGAAAGGCTGTCCCAAGGGGAGCCAACCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SGIQAELPAKIN*ERLSQGEPTLS
Trigger: GCTCAGGGTTGGCTCCCCTTGGGACAGCCTTTCCCAGTTAATTTTTGCTGGAAGCTCAGCTTGAATGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS CCA 72 bp CTAGGGCTAGTTCTCAGCAGCCATTCATCTCAACCCTaGATGCAGGGTCTAGTCTTGGTTTCGGGGGCTTAT +
Preference number: 6 (lower is better)
Translates to: LGLVLSSHSSQP*MQGLVLVSGAY
Trigger: ATAAGCCCCCGAAACCAAGACTAGACCCTGCATCCAGGGTTGAGATGAATGGCTGCTGAGAACTAGCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS CAA 72 bp TGCACCCCATCTGTGTACCGGCCTGAGCCAATGAAATaGAAGCCTGTGCTGACTTTGGCCTGGACTTGTGAA +
Preference number: 6 (lower is better)
Translates to: CTPSVYRPEPMK*KPVLTLAWTCE
Trigger: TTCACAAGTCCAGGCCAAAGTCAGCACAGGCTTCAATTTCATTGGCTCAGGCCGGTACACAGATGGGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp TTGAAGCCTGTGCTGACTTTGGCCTGGACTTGTGAATaGGCCTTTCTGCCCCAAAAGGGACAGGAAGGACAT +
Preference number: 6 (lower is better)
Translates to: LKPVLTLAWTCE*AFLPQKGQEGH
Trigger: ATGTCCTTCCTGTCCCTTTTGGGGCAGAAAGGCTCATTCACAAGTCCAGGCCAAAGTCAGCACAGGCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp GAAATTGAAGCCTGTGCTGACTTTGGCCTGGACTTGTaGATGAGCCTTTCTGCCCCAAAAGGGACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: EIEACADFGLDL*MSLSAPKGTGR
Trigger: CCTTCCTGTCCCTTTTGGGGCAGAAAGGCTCATTCACAAGTCCAGGCCAAAGTCAGCACAGGCTTCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp CATCAAGCTCTAATGCACCCCATCTGTGTACCGGCCTaGGCCAATGAAATTGAAGCCTGTGCTGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: HQALMHPICVPA*ANEIEACADFG
Trigger: GCCAAAGTCAGCACAGGCTTCAATTTCATTGGCTCAGGCCGGTACACAGATGGGGTGCATTAGAGCTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp ACATTAACTACTGAGTTAAAGAGGTATGCTCGTCCTTaGCTTCCTTGGAATGACCGGCGACAGGCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: TLTTELKRYARP*LPWNDRRQAAL
Trigger: CAGGGCCGCCTGTCGCCGGTCATTCCAAGGAAGTCAAGGACGAGCATACCTCTTTAACTCAGTAGTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581865.1
CDS GCA 72 bp AATGCAGCTGTAGGTCCGGTGGCAGGAGGGCAGATATaGCTGGAAAGTCTTCGATCTTGTCATCTTCACCAT +
Preference number: 6 (lower is better)
Translates to: NAAVGPVAGGQI*LESLRSCHLHH
Trigger: ATGGTGAAGATGACAAGATCGAAGACTTTCCAGGCATATCTGCCCTCCTGCCACCGGACCTACAGCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312655.9
ENST00000582192.1
ENST00000585166.1
ENST00000672916.2
CDS CAA 72 bp AATGTTCGGTTGAATGGCGTTCACGTGGACACTGGGTaGGGTAGATGCTGTCCAATCAGTCCCAGCCATTGT +
Preference number: 6 (lower is better)
Translates to: NVRLNGVHVDTG*GRCCPISPSHC
Trigger: ACAATGGCTGGGACTGATTGGACAGCATCTACCCAACCCAGTGTCCACGTGAACGCCATTCAACCGAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312655.9
ENST00000581865.1
ENST00000585166.1
CDS CAA 72 bp TCCACAGTCTCACAACTTCCTGGTGGCTCTCTCATCTaGCTAAGGAACCCCTCTTACAAGACATTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: STVSQLPGGSLI*LRNPSYKTFPC
Trigger: GCAGGGGAATGTCTTGTAAGAGGGGTTCCTTAGCAAGATGAGAGAGCCACCAGGAAGTTGTGAGACTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CAA 90 bp CCTCAGGCCCGATTTGAAAAGCCTCACTACTACAGATGTGTTTGTTaGGGCAGCTTTCTTCACCTCCTAGGTCAAATCAGCCAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: PQARFEKPHYYRCVC*GSFLHLLGQISQLE
Trigger: CTCCAGCTGGCTGATTTGACCTAGGAGGTGAAGAAAGCTGCCCAAACAAACACATCTGTAGTAGTGAGGCTTTTCAAATCGGGCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CAA 90 bp CCCTGGAGTAAGGCTAGAACAAGAGGTTCGGTCCTCAGGCCCGATTaGAAAAGCCTCACTACTACAGATGTGTTTGTTTGGGCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: PWSKARTRGSVLRPD*KSLTTTDVFVWAAF
Trigger: GAAAGCTGCCCAAACAAACACATCTGTAGTAGTGAGGCTTTTCAAATCGGGCCTGAGGACCGAACCTCTTGTTCTAGCCTTACTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp ATCATGATCAAATGTCATGCCATATTACCTCATGTATaGGCCCTAACGGCCCCCACAGGCCAGAAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: IMIKCHAILPHV*ALTAPTGQKVS
Trigger: GCTGACCTTCTGGCCTGTGGGGGCCGTTAGGGCTCATACATGAGGTAATATGGCATGACATTTGATCATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 72 bp GCCCTGAAACACCCATACCTGCATATTCAGGCGATGTaGCTTGGTTCCAAGTGGCTGAAACAAAGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: ALKHPYLHIQAM*LGSKWLKQSEE
Trigger: CTCTTCACTTTGTTTCAGCCACTTGGAACCAAGCCACATCGCCTGAATATGCAGGTATGGGTGTTTCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp AGGCTAGAACAAGAGGTTCGGTCCTCAGGCCCGATTTaGAAAGCCTCACTACTACAGATGTGTTTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: RLEQEVRSSGPI*KASLLQMCLFG
Trigger: CCCAAACAAACACATCTGTAGTAGTGAGGCTTTTCAAATCGGGCCTGAGGACCGAACCTCTTGTTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 72 bp CCTGAGCTGAGCAGATCTAAACCAATCCCCAAAAGGTaGCCACAGGGAAATATCTCAGCTGGAAGGAAATTC +
Preference number: 6 (lower is better)
Translates to: PELSRSKPIPKR*PQGNISAGRKF
Trigger: GAATTTCCTTCCAGCTGAGATATTTCCCTGTGGCCACCTTTTGGGGATTGGTTTAGATCTGCTCAGCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS CCA 72 bp ACTCAGAGTTTTTCTCAGTTGAGTGAGACGGTCACGTaGGTCAGCCCTCCCTGTACAAAGATGGAGTACAAA +
Preference number: 6 (lower is better)
Translates to: TQSFSQLSETVT*VSPPCTKMEYK
Trigger: TTTGTACTCCATCTTTGTACAGGGAGGGCTGACCCACGTGACCGTCTCACTCAACTGAGAAAAACTCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 72 bp GTTCTACAAGAGCTGACTAGATCCTTCATTCCTCTCTaGCTGGGGCTACCAAACCAGAGGCAAAGAAAGCAA +
Preference number: 6 (lower is better)
Translates to: VLQELTRSFIPL*LGLPNQRQRKQ
Trigger: TTGCTTTCTTTGCCTCTGGTTTGGTAGCCCCAGCCAGAGAGGAATGAAGGATCTAGTCAGCTCTTGTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CAA 72 bp AGCCATTCATCTCAACCCTGGATGCAGGGTCTAGTCTaGGTTTCGGGGGCTTATACGTCAGATGATAATCCT +
Preference number: 6 (lower is better)
Translates to: SHSSQPWMQGLV*VSGAYTSDDNP
Trigger: AGGATTATCATCTGACGTATAAGCCCCCGAAACCAAGACTAGACCCTGCATCCAGGGTTGAGATGAATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS GCA 72 bp ATCTTGCTAAGGAACCCCTCTTACAAGACATTCCCCTaGTTTATCAGAATTCACCTTCTGAGCAGGGAGCAC +
Preference number: 6 (lower is better)
Translates to: ILLRNPSYKTFP*FIRIHLLSREH
Trigger: GTGCTCCCTGCTCAGAAGGTGAATTCTGATAAAGCAGGGGAATGTCTTGTAAGAGGGGTTCCTTAGCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 72 bp GGAGGCTGGGGCAATGATCTTTCCATTAGGCAGACCTaGATAAGAATCTATAGATTATTTAACGCCGGGGGT +
Preference number: 6 (lower is better)
Translates to: GGWGNDLSIRQT*IRIYRLFNAGG
Trigger: ACCCCCGGCGTTAAATAATCTATAGATTCTTATGCAGGTCTGCCTAATGGAAAGATCATTGCCCCAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS GCA 72 bp TCATTTAATTACACTGCTGATCCAGCTCCAGTTATCTaGTTCCCAGCTCCTAACTCCCACTGGGCAGATTCT +
Preference number: 6 (lower is better)
Translates to: SFNYTADPAPVI*FPAPNSHWADS
Trigger: AGAATCTGCCCAGTGGGAGTTAGGAGCTGGGAAGCAGATAACTGGAGCTGGATCAGCAGTGTAATTAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 72 bp CACATTAACTCTATGTCGAGGCACAAGAAGAGAGAGTaGGTAGTTAGTGACACGCACATCAGGCATTCAAGC +
Preference number: 6 (lower is better)
Translates to: HINSMSRHKKRE*VVSDTHIRHSS
Trigger: GCTTGAATGCCTGATGTGCGTGTCACTAACTACCCACTCTCTCTTCTTGTGCCTCGACATAGAGTTAATGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582813.1
CDS CAA 72 bp AAGGCTAGAACAAGAGGTTCGGTCCTCAGGCCCGATTaGAAAAGCCTCACTACTACAGATGTGTTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: KARTRGSVLRPD*KSLTTTDVFVW
Trigger: CCAAACAAACACATCTGTAGTAGTGAGGCTTTTCAAATCGGGCCTGAGGACCGAACCTCTTGTTCTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CAA 90 bp TTTAGTAATTCCACAGTCTCACAACTTCCTGGTGGCTCTCTCATCTaGCTAAGGAACCCCTCTTACAAGACATTCCCCTGCTTTATCAGA +
Preference number: 6 (lower is better)
Translates to: FSNSTVSQLPGGSLI*LRNPSYKTFPCFIR
Trigger: TCTGATAAAGCAGGGGAATGTCTTGTAAGAGGGGTTCCTTAGCAAGATGAGAGAGCCACCAGGAAGTTGTGAGACTGTGGAATTACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp AGCCCTCCCTGTACAAAGATGGAGTACAAATATTCTTaGGAGCTTGTAAACCTCTGCAACTTCAGGAGCACT +
Preference number: 6 (lower is better)
Translates to: SPPCTKMEYKYS*ELVNLCNFRST
Trigger: AGTGCTCCTGAAGTTGCAGAGGTTTACAAGCTCTCAAGAATATTTGTACTCCATCTTTGTACAGGGAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp GTTTCGGGGGCTTATACGTCAGATGATAATCCTACATaGTCTCTAGAATTCTCTCAGCCTTTAAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSGAYTSDDNPT*SLEFSQPLKSW
Trigger: CCAGGACTTTAAAGGCTGAGAGAATTCTAGAGATCATGTAGGATTATCATCTGACGTATAAGCCCCCGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585166.1
CDS TCA 72 bp CTTGTATGCCAGGCCAAACAGATAAGACATAAATTCTaGAGGCCATTACCATCTCCACATACTCAACTTCTG +
Preference number: 6 (lower is better)
Translates to: LVCQAKQIRHKF*RPLPSPHTQLL
Trigger: CAGAAGTTGAGTATGTGGAGATGGTAATGGCCTTCAGAATTTATGTCTTATCTGTTTGGCCTGGCATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS CCA 72 bp AAAATTCGAAGGGAAGCTGAGAAGGAAGCTAAAGGCTaGCTGAAACATAAGCAGCATAAAGGAGAGGAATTA +
Preference number: 6 (lower is better)
Translates to: KIRREAEKEAKG*LKHKQHKGEEL
Trigger: TAATTCCTCTCCTTTATGCTGCTTATGTTTCAGCCAGCCTTTAGCTTCCTTCTCAGCTTCCCTTCGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582192.1
CDS TCA 72 bp ACATTAACTACTGAGTTAAAGAGGTATGCTCGTCCTTaGCTTCCTTGGAATGACTTGGAAATTAGTTCATCA +
Preference number: 6 (lower is better)
Translates to: TLTTELKRYARP*LPWNDLEISSS
Trigger: TGATGAACTAATTTCCAAGTCATTCCAAGGAAGTCAAGGACGAGCATACCTCTTTAACTCAGTAGTTAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312655.9
ENST00000585166.1
ENST00000672916.2