RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YLPM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119596

Ensembl transcript IDs: ENST00000325680.12, ENST00000546901.1, ENST00000547879.5, ENST00000549197.1, ENST00000549293.5, ENST00000550021.1, ENST00000552421.5, ENST00000553381.1, ENST00000554107.2

Found 1050 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCTGCAGTGGCAGCAAGCCCCAAGCCAAGCTGGGTCTGGAGCTTaGCAGTGGGGCAACCCATCATTCATGGTGCCAGTCTGGGTTAGG +
Preference number: 1 (lower is better)
Translates to: DLQWQQAPSQAGSGA*QWGNPSFMVPVWVR
Trigger: CCTAACCCAGACTGGCACCATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTTGGGGCTTGCTGCCACTGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 90 bp CCTTCCCTTGGCCCTTTATCCAAGTGGAAGGCCCCAGGCCTGCCATaGAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGT +
Preference number: 1 (lower is better)
Translates to: PSLGPLSKWKAPGLP*SPPGCSKIWHHTGR
Trigger: ACGACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 90 bp CTTGCCCTTCCCTTGGCCCTTTATCCAAGTGGAAGGCCCCAGGCCTaGCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTG +
Preference number: 1 (lower is better)
Translates to: LALPLALYPSGRPQA*HAVHLGAAKSGTTL
Trigger: CAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGGAAGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp GGCCAGTATGGGACAGGCAGCACTGCTGCATCTTTCCACATAGGGTaGTCATTTGACCTGCAGTGGCAGCAAGCCCCAAGCCAAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GQYGTGSTAASFHIG*SFDLQWQQAPSQAG
Trigger: CCCAGCTTGGCTTGGGGCTTGCTGCCACTGCAGGTCAAATGACCACCCTATGTGGAAAGATGCAGCAGTGCTGCCTGTCCCATACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp ACACTCAAGCTCAGTCCCTCGGGGATCCCTATGAAGGCACACTGGTaGCACCTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGT +
Preference number: 1 (lower is better)
Translates to: TLKLSPSGIPMKAHW*HLRGKASVKGEPRC
Trigger: ACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGGGACTGAGCTTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp ACAACACTCAAGCTCAGTCCCTCGGGGATCCCTATGAAGGCACACTaGTGGCACCTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGG +
Preference number: 1 (lower is better)
Translates to: TTLKLSPSGIPMKAH*WHLRGKASVKGEPR
Trigger: CCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGGGACTGAGCTTGAGTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 90 bp AAAGGTGAGCCTAGGTGTCACTGGCGCACATTCCTAATCAAGAGATaGATGTTGCCTCATGCACAGCTGACAGCTGTTAGGCTGGCATCT +
Preference number: 1 (lower is better)
Translates to: KGEPRCHWRTFLIKR*MLPHAQLTAVRLAS
Trigger: AGATGCCAGCCTAACAGCTGTCAGCTGTGCATGAGGCAACATGCATCTCTTGATTAGGAATGTGCGCCAGTGACACCTAGGCTCACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp AAATGGCAGCTTCTGCAGAACTCCCAAGAGGCAGTGTGTTTTGCCTaGTGTGAGGCAAGTCCTAGGTCATCATATGTGCACTTCAAGCTC +
Preference number: 1 (lower is better)
Translates to: KWQLLQNSQEAVCFA*CEASPRSSYVHFKL
Trigger: GAGCTTGAAGTGCACATATGATGACCTAGGACTTGCCTCACACCAGGCAAAACACACTGCCTCTTGGGAGTTCTGCAGAAGCTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 90 bp TGTAAGCTCTTCAGACCCAGCCCTAAAAGGCAGTGGAATGAGGTATaGCAGTCAGAAGCTTGGGGGCACTCCTTTCCACAGTTAGTACTA +
Preference number: 1 (lower is better)
Translates to: CKLFRPSPKRQWNEV*QSEAWGHSFPQLVL
Trigger: TAGTACTAACTGTGGAAAGGAGTGCCCCCAAGCTTCTGACTGTCATACCTCATTCCACTGCCTTTTAGGGCTGGGTCTGAAGAGCTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 90 bp CTGGAAGCAGACAGTTCTAATTCTGAGCACCTCGTGGCAAATGTCTaGCTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTAC +
Preference number: 1 (lower is better)
Translates to: LEADSSNSEHLVANV*LDGPLVCTVQPLHY
Trigger: GTAATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCACGAGGTGCTCAGAATTAGAACTGTCTGCTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp AAGCAGACAGTTCTAATTCTGAGCACCTCGTGGCAAATGTCTGACTaGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTACCTCC +
Preference number: 1 (lower is better)
Translates to: KQTVLILSTSWQMSD*MDLLFVQFNRCITS
Trigger: GGAGGTAATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCACGAGGTGCTCAGAATTAGAACTGTCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp CCTATACTGAGCTGGAAGCAGACAGTTCTAATTCTGAGCACCTCGTaGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAAC +
Preference number: 1 (lower is better)
Translates to: PILSWKQTVLILSTS*QMSDWMDLLFVQFN
Trigger: GTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCACGAGGTGCTCAGAATTAGAACTGTCTGCTTCCAGCTCAGTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 90 bp TGCAGAAGGCCATGCTTTCCAGTAATGAACAATCTGGCAAGAACTTaGAAACCTGACAGGCTTAAAGGTTACATGCCAGAGTGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: CRRPCFPVMNNLART*KPDRLKGYMPECSA
Trigger: TGCAGAGCACTCTGGCATGTAACCTTTAAGCCTGTCAGGTTTTCAAGTTCTTGCCAGATTGTTCATTACTGGAAAGCATGGCCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR CCA 90 bp AACACAGTTTTTATCAAGAGTCCTCTATATCACACACGGGTTCGATaGGACCACTCCCTGGAGATTCTGTATACTCTAGGGGGTAGGAAT +
Preference number: 1 (lower is better)
Translates to: NTVFIKSPLYHTRVR*DHSLEILYTLGGRN
Trigger: ATTCCTACCCCCTAGAGTATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGATAAAAACTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR CCA 90 bp AATCTCTGTATCATCCACAAAGATTACAGCCTCAACATCTTCACTTaGGCAACAGGTGGAAGCAGCAAACTGAGTCAACAGCCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: NLCIIHKDYSLNIFT*ATGGSSKLSQQPVF
Trigger: GAAGACTGGCTGTTGACTCAGTTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTGGATGATACAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp CTGCCCGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTaGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGC +
Preference number: 1 (lower is better)
Translates to: LPGKQFQMVSQIPKC*WFSAIQNFFKLSIC
Trigger: GCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCGGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 90 bp AAGTCTCATATATATTTGGTTCGATTGAGGGCTTTTTCAGCCAGGTaGCCACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACC +
Preference number: 1 (lower is better)
Translates to: KSHIYLVRLRAFSAR*PLSSVIFSQSVCPT
Trigger: GGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGTGGTCACCTGGCTGAAAAAGCCCTCAATCGAACCAAATATATATGAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR TCA 90 bp CTTCACACGATATCCCAGCTCCAACCTCCTGAAGGTTTATTTTCCTaGTGTTCAGGTAAAGTCACTCAACTAAATGGCAGCTTCTGCAGA +
Preference number: 1 (lower is better)
Translates to: LHTISQLQPPEGLFS*CSGKVTQLNGSFCR
Trigger: TCTGCAGAAGCTGCCATTTAGTTGAGTGACTTTACCTGAACATCAGGAAAATAAACCTTCAGGAGGTTGGAGCTGGGATATCGTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 90 bp GTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTaGAGAAGGCCATGCTTTCCAGTAATGAACAATCTGGCAAGAACT +
Preference number: 1 (lower is better)
Translates to: VSGFHLVLTTREEIL*RRPCFPVMNNLART
Trigger: AGTTCTTGCCAGATTGTTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR CCA 90 bp CCCGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTaGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACT +
Preference number: 1 (lower is better)
Translates to: PGKQFQMVSQIPKCW*FSAIQNFFKLSICT
Trigger: AGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 90 bp ACAATCTGGCAAGAACTTGAAAACCTGACAGGCTTAAAGGTTACATaGCAGAGTGCTCTGCATCTTTATACTCTTTCCCTGCAATCTTCA +
Preference number: 1 (lower is better)
Translates to: TIWQELENLTGLKVT*QSALHLYTLSLQSS
Trigger: TGAAGATTGCAGGGAAAGAGTATAAAGATGCAGAGCACTCTGGCATGTAACCTTTAAGCCTGTCAGGTTTTCAAGTTCTTGCCAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR GCA 90 bp CAGAAACTCAAATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATaGATATGTTGGGTAGGCTGTGCCACATATCTGCTGGAATGTAAG +
Preference number: 1 (lower is better)
Translates to: QKLKFGDLVAKKRQL*ICWVGCATYLLECK
Trigger: CTTACATTCCAGCAGATATGTGGCACAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAATTTGAGTTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR GCA 90 bp GATTTTGATTTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTaGTCCCTGACCTACATCTTGCCCTTCCCTTGGCCCTTTATCCAA +
Preference number: 1 (lower is better)
Translates to: DFDFNSFHNSKLLIN*SLTYILPFPWPFIQ
Trigger: TTGGATAAAGGGCCAAGGGAAGGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAAATCAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp AAATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATGCATATGTTaGGTAGGCTGTGCCACATATCTGCTGGAATGTAAGAATGCCCTT +
Preference number: 1 (lower is better)
Translates to: KFGDLVAKKRQLCIC*VGCATYLLECKNAL
Trigger: AAGGGCATTCTTACATTCCAGCAGATATGTGGCACAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR TCA 90 bp CTACATCATTCAAGCTTTTCTTTCCCTCATATTCAGTTGGTTGGTTaGTCCCTGAAGCAACCTCTGATTTTGATTTCAATTCATTCCACA +
Preference number: 1 (lower is better)
Translates to: LHHSSFSFPHIQLVG*SLKQPLILISIHST
Trigger: TGTGGAATGAATTGAAATCAAAATCAGAGGTTGCTTCAGGGATCAACCAACCAACTGAATATGAGGGAAAGAAAAGCTTGAATGATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 90 bp TGGTCTACATCATTCAAGCTTTTCTTTCCCTCATATTCAGTTGGTTaGTTGATCCCTGAAGCAACCTCTGATTTTGATTTCAATTCATTC +
Preference number: 1 (lower is better)
Translates to: WSTSFKLFFPSYSVG*LIPEATSDFDFNSF
Trigger: GAATGAATTGAAATCAAAATCAGAGGTTGCTTCAGGGATCAACCAACCAACTGAATATGAGGGAAAGAAAAGCTTGAATGATGTAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTSSARP*LQTTSK
Trigger: CTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: YSGGNTLCWNPPADPRLASSARP*LQTTSK
Trigger: CTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCCCATTCTGCTGGCAATaGCCTCCCAGTCACGTTTCC +
Preference number: 2 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFPFCWQ*PPSHVS
Trigger: GGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGG...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR-3UTR CCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGGCTGGGTCTGGAGCTTaGCAGTGGGGCAACCCATCA +
Preference number: 2 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGAGSGA*QWGNPS
Trigger: TGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGC...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp CTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTGGCGCACATTCCATAGGGTGGTCATTTaGCCTGCAGTGGCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: LRGKASVKGEPRCHWRTFHRVVI*PAVAAS
Trigger: GCTTGCTGCCACTGCAGGTCAAATGACCACCCTATG...GAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCTTCTCTTCCAGGTCTaGCCATCTGACCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: YSGGNTLCWNPPADPRLALLFQV*PSDPLL
Trigger: AAGAAGAGGGTCAGATGGGCAGACCTGGAAGAGAAG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR-3UTR GCA 90 bp CTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTGGCGCACATTCGACAGGCAGCACTGCTaGATCTTTCCACATAGGGTG +
Preference number: 2 (lower is better)
Translates to: LRGKASVKGEPRCHWRTFDRQHC*IFPHRV
Trigger: CACCCTATGTGGAAAGATGCAGCAGTGCTGCCTGTC...GAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCATGCTGTATAGCCCATaGATCTCATCGGCTTTATCA +
Preference number: 2 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLMLYSP*ISSALS
Trigger: TGATAAAGCCGATGAGATTCATGGGCTATACAGCAT...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR-3UTR TCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCGACCACTTTCATCTGTaGTCTTCTCCCAATCAGTCT +
Preference number: 2 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSDHFHL*SSPNQS
Trigger: AGACTGATTGGGAGAAGATCACAGATGAAAGTGGTC...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR-3UTR GCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTGGGACAGGCAGCACTaGTGCATCTTTCCACATAGG +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKWDRQH*CIFPHR
Trigger: CCTATGTGGAAAGATGCAGCAGTGCTGCCTGTCCCA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp GAGCCTAGGTGTCACTGGCGCACATTCCTAATCAAGAGATGCATGTaGCCTCATGCACAGCTGACAGCTGTTAGGCTGGCATCTGATTCT +
Preference number: 2 (lower is better)
Translates to: EPRCHWRTFLIKRCM*PHAQLTAVRLASDS
Trigger: AGAATCAGATGCCAGCCTAACAGCTGTCAGCTGTGCATGAGGCAACATGCATCTCTTGATTAGGAATGTGCGCCAGTGACACCTAGGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TTCTGCAGGTGCCGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTTGACTCCCGTCAACCAGCTCTaGAAGCAGGAGTGTAAGCTC +
Preference number: 2 (lower is better)
Translates to: FCRCRVYLVTDYTSLFLTPVNQL*KQECKL
Trigger: GAGCTTACACTCCTGCTTTCAGAGCTGGTTGACGGG...AGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCGGCACCTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACACCTCGGGGATCCCTATaGAGGCACACTGGTGGCACC +
Preference number: 2 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTPRGSL*RHTGGT
Trigger: GGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGG...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRSSARP*LQTTSK
Trigger: CTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCT...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGGGTGCCGGGTATATCTaGTCACAGATTACACTTCCC +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKGAGYI*SQITLP
Trigger: GGGAAGTGTAATCTGTGACCAGATATACCCGGCACC...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp TTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTaGCCCTTCCCTTGGCCCTTTATCCAAGTGGAAGGCCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: FHNSKLLINCSLTYI*PFPWPFIQVEGPRP
Trigger: AGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGGAAGGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp GCAAGTCCTAGGTCATCATATGTGCACTTCAAGCTCCCCTTAGTGTaGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCA +
Preference number: 2 (lower is better)
Translates to: ASPRSSYVHFKLPLV*LMEAMSSSGLRLYP
Trigger: TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCACATATGATGACCTAGGACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTGTACTGGGTTCCCATaGGATCTGATGAGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKCTGFP*DLMSVF
Trigger: GAAGACACTCATCAGATCTCATGGGAACCCAGTACA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGACCCATCATTCATGGTaGCAGTCTGGGTTAGGATTC +
Preference number: 2 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGTHHSW*QSGLGF
Trigger: GAATCCTAACCCAGACTGGCACCATGAATGATGGGT...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAAGGTGGTCATTTGACCTaGAGTGGCAGCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKGGHLT*SGSKPQ
Trigger: TTGGGGCTTGCTGCCACTGCAGGTCAAATGACCACC...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGATTCTAATACCTCTTaGGGACACTGGAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSDSNTS*GHWRTL
Trigger: TAAAGTTCTCCAGTGTCCCCAAGAGGTATTAGAATC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGGGGTCACGGCCAGTATaGGACAGGCAGCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKGSRPV*DRQHCC
Trigger: GCAGCAGTGCTGCCTGTCCCATACTGGCCGTGACCC...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTTCATGGTGCCAGTCTaGGTTAGGATTCTAGAACAG +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKFMVPV*VRILEQ
Trigger: CTGTTCTAGAATCCTAACCCAGACTGGCACCATGAA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAAATGAAGGCACACTGGTaGCACCTCAGAGGTAAAGCG +
Preference number: 2 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKMKAHW*HLRGKA
Trigger: CGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCAT...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGCCATGTCTCCCTTTCTaGGGCTCAAGGGGTCACGGC +
Preference number: 2 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLPCLPF*GSRGHG
Trigger: GCCGTGACCCCTTGAGCCTCAGAAAGGGAGACATGG...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTTGGTCATCCACTGGTTaGCTGGTGAGTCAGAGTATG +
Preference number: 2 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCIWSSTG*LVSQSM
Trigger: CATACTCTGACTCACCAGTCAACCAGTGGATGACCA...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGAGTTACATAACTTCCTaGCCTTTTTGCCTTAGTGCC +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKSYITS*PFCLSA
Trigger: GGCACTAAGGCAAAAAGGTCAGGAAGTTATGTAACT...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp CCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCACCAAATGGAAAAATCTaGCCGGCAAGCAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: PLVLLMEAMSSSGLRLYPPNGKI*PASNFR
Trigger: TCTGAAATTGCTTGCCGGGCAGATTTTTCCATTTGG...TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGATTCTAATACCTCTTaGGGACACTGGAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLDSNTS*GHWRTL
Trigger: TAAAGTTCTCCAGTGTCCCCAAGAGGTATTAGAATC...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGCAGCAGACCCCCGCCTaGCTTCAGCAGTTAAGCTAT +
Preference number: 2 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRQQTPA*LQQLSY
Trigger: ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTG...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp TCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTTGCCCAGAGCCAGGGCAGCCTaGGCCAATCTCTGTATCATC +
Preference number: 2 (lower is better)
Translates to: SFHNSKLLINCSLTYILPRARAA*ANLCII
Trigger: GATGATACAGAGATTGGCCCAGGCTGCCCTGGCTCT...GGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCGGTAAGACCATGTACTaGGTTCCCATGAGATCTGAT +
Preference number: 2 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRGKTMY*VPMRSD
Trigger: ATCAGATCTCATGGGAACCCAGTACATGGTCTTACC...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTGCCTCATGCACAGCTaGCAGCTGTTAGGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KMLVVLRNSELFQALNMHCLMHS*QLLGWH
Trigger: ATGCCAGCCTAACAGCTGTCAGCTGTGCATGAGGCA...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTTGTCCAGTTCTGGGCTaGGACTCTACCCAAATAACC +
Preference number: 2 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCICPVLG*DSTQIT
Trigger: GGTTATTTGGGTAGAGTCTCAGCCCAGAACTGGACA...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGAAGTTGCTAATAAACTaGTCCCTGACCTACATCTTG +
Preference number: 2 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKKLLIN*SLTYIL
Trigger: CAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTT...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp AGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTACACAGAAATCTAGCAGCCAGTaGCAACCCTCTGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RQTSLQRCDRKHFTLGTQKSSSQ*QPSASP
Trigger: TGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTT...CTGTGTACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATCTGGAGCTTGGCAGTaGGGCAACCCATCATTCATG +
Preference number: 2 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGSGAWQ*GNPSFM
Trigger: CATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp CCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCAGAGTCAGAGTATGTTTaGAAAGCTAAGACTACCTGT +
Preference number: 2 (lower is better)
Translates to: PLVLLMEAMSSSGLRLYPESEYV*KAKTTC
Trigger: ACAGGTAGTCTTAGCTTTCCAAACATACTCTGACTC...TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp CAATCTCTGTATCATCCACAAAGATTACAGCCTCAACATCTTCACTaGGGCAACAGGTGGAAGCAGCAAACTGAGTCAACAGCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: QSLYHPQRLQPQHLH*GNRWKQQTESTASL
Trigger: AAGACTGGCTGTTGACTCAGTTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTGGATGATACAGAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTTATGAACCCCTATACTaGGCTGGAAGCAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIYEPLY*AGSRQF
Trigger: GAACTGTCTGCTTCCAGCTCAGTATAGGGGTTCATA...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TTTTTATCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGGTGCCACATATCTGCTaGAATGTAAGAATGCCCTTT +
Preference number: 2 (lower is better)
Translates to: FLSRVLYITHGFDGTTPWVPHIC*NVRMPF
Trigger: AAAGGGCATTCTTACATTCCAGCAGATATGTGGCAC...CCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp AAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCAATTATGCATATGTTaGGTAGGCTGTGCCACATAT +
Preference number: 2 (lower is better)
Translates to: KSSSQWQPSASPFNKFFCQLCIC*VGCATY
Trigger: ATATGTGGCACAGCCTACCCAACATATGCATAATTG...GCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCAAGCCAAGCTGGGTCTaGAGCTTGGCAGTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIKPSWV*SLAVGQ
Trigger: TTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTT...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTCAAATCCCAAAATGCTaGTGGTTCTCCGCAATTCAG +
Preference number: 2 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCIQIPKC*WFSAIQ
Trigger: CTGAATTGCGGAGAACCACCAGCATTTTGGGATTTG...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp TGCAGGTGCCGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTaGACTTCTCCCTTGACTGTGATCACAAAGAGTGGTTTATTGATA +
Preference number: 2 (lower is better)
Translates to: CRCRVYLVTDYTSLF*TSPLTVITKSGLLI
Trigger: TATCAATAAACCACTCTTTGTGATCACAGTCAAGGGAGAAGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCGGCACCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACACCACTGGTTGACTGGTaGGTCAGAGTATGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTPLVDW*VRVCLE
Trigger: TTCCAAACATACTCTGACTCACCAGTCAACCAGTGG...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACAGCCAGTCTTCATTCTaGAGCTTAGTGAGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KMLVVLRNSELFQALNMHSQSSF*SLVRGL
Trigger: CAGCCCTCTCACTAAGCTTCAGAATGAAGACTGGCT...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAACAAGAACTGAAACGTaGAAGCAAGGTGACACACAA +
Preference number: 2 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRTRTET*KQGDTQ
Trigger: TTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGT...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATAGGGTTCTTTTGGTCTaGGGAAAAATAAAGAGTATC +
Preference number: 2 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYRVLLV*GKIKSI
Trigger: GATACTCTTTATTTTTCCCCAGACCAAAAGAACCCT...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGACCAGGGCTTTCTCACTaGAGCTGTCTTATCAAGGTT +
Preference number: 2 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGPGLSH*SCLIKV
Trigger: AACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGG...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGGAGCCTAGGTGTCACTaGCGCACATTCCTAATCAAG +
Preference number: 2 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKEPRCH*RTFLIK
Trigger: CTTGATTAGGAATGTGCGCCAGTGACACCTAGGCTC...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCCAGTGGAATGAGGTATaGCAGTCAGAAGCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIQWNEV*QSEAWG
Trigger: CCCCCAAGCTTCTGACTGTCATACCTCATTCCACTG...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGGGCCCTTTTCCTATCTaGATCCTTCTTCTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWGPFPI*ILLLFQ
Trigger: CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCC...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR-3UTR GCA 90 bp AGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTACACAGATGTTGGGTAGGCTGTaGCACATATCTGCTGGAATG +
Preference number: 2 (lower is better)
Translates to: RQTSLQRCDRKHFTLGTQMLGRL*HISAGM
Trigger: CATTCCAGCAGATATGTGGCACAGCCTACCCAACAT...CTGTGTACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCACAAGAACTGAAACGTaGAAGCAAGGTGACACACAA +
Preference number: 2 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSTRTET*KQGDTQ
Trigger: TTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGT...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTCATTTGACCTGCAGTaGCAGCAAGCCCCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: FNSFHNSKLLINCSLTYISFDLQ*QQAPSQ
Trigger: TTGGCTTGGGGCTTGCTGCCACTGCAGGTCAAATGA...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGACTGTGGTCATCCACTaGTTGACTGGTGAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLTVVIH*LTGESE
Trigger: CTCTGACTCACCAGTCAACCAGTGGATGACCACAGT...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp GAAGCAACCTCTGATTTTGATTTCAATTCATTCCACAATTCAAAGTaGCTAATAAACTGCTCCCTGACCTACATCTTGCCCTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: EATSDFDFNSFHNSK*LINCSLTYILPFPW
Trigger: CCAAGGGAAGGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAAATCAAAATCAGAGGTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR TCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCGCATTACCTCCCAGATaGTCAAGTGGTTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIALPPR*SSGSAT
Trigger: AGTTGCTGAACCACTTGATCATCTGGGAGGTAATGC...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATTGAAAATGTATCAGTaGGCCTTCCATAGCAAGTCA +
Preference number: 2 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGLKMYQ*AFHSKS
Trigger: TGACTTGCTATGGAAGGCCCACTGATACATTTTCAA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CCA 90 bp TCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTTGCCCTTTATTACATCCAAATaGAAAAATCTGCCCGGCAAG +
Preference number: 2 (lower is better)
Translates to: SFHNSKLLINCSLTYILPFITSK*KNLPGK
Trigger: CTTGCCGGGCAGATTTTTCCATTTGGATGTAATAAA...GGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 90 bp TCTACATCATTCAAGCTTTTCTTTCCCTCATATTCAGTTGGTTGGTaGATCCCTGAAGCAACCTCTGATTTTGATTTCAATTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: STSFKLFFPSYSVGW*IPEATSDFDFNSFH
Trigger: GTGGAATGAATTGAAATCAAAATCAGAGGTTGCTTCAGGGATCAACCAACCAACTGAATATGAGGGAAAGAAAAGCTTGAATGATGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp GTACACAGAAACTTTAAACTCACACTATGTAAGCCTCTAATCAGCCTGAGCAAAAAGAAGAGACAATTATaGATATGTTGGGTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: VHRNFKLTLCKPLISLSKKKRQL*ICWVGC
Trigger: ACAGCCTACCCAACATATGCATAATTGTCTCTTCTT...TTTGCTCAGGCTGATTAGAGGCTTACATAGTGTGAGTTTAAAGTTTCTGTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCAAATGTCTGACTGGATaGACCTCTTGTTTGTACAGT +
Preference number: 2 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIKCLTG*TSCLYS
Trigger: ACTGTACAAACAAGAGGTCCATCCAGTCAGACATTT...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR GCA 90 bp ATCCACAATTCAAGTTCAAATGAAGGCAACAAGCTTGAGTTCCACAGAATACATGAAAAATTAACGTCTTaGTTGGGTACAGCAAGATTC +
Preference number: 2 (lower is better)
Translates to: IHNSSSNEGNKLEFHRIHEKLTS*LGTARF
Trigger: GAATCTTGCTGTACCCAAGCAAGACGTTAATTTTTC...ATGTATTCTGTGGAACTCAAGCTTGTTGCCTTCATTTGAACTTGAATTGTGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR CAA 90 bp TGTTACAGAATGGATATGCTCCAGGGAACTGATGAATATTTGAACTaGGTCAGTCTTCAAGACACAAAGATAGAGAAATCAGCTATAAAA +
Preference number: 2 (lower is better)
Translates to: CYRMDMLQGTDEYLN*VSLQDTKIEKSAIK
Trigger: TTTTATAGCTGATTTCTCTATCTTTGTGTCTTGAAGACTGACCAAGTTCAAATATTCATCAGTTCCCTGGAGCATATCCATTCTGTAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR GCA 72 bp GGCCCTTTATCCAAGTGGAAGGCCCCAGGCCTGCCATaGAGTCCACCTGGGTGCAGCAAAATCTGGCACCAC +
Preference number: 3 (lower is better)
Translates to: GPLSKWKAPGLP*SPPGCSKIWHH
Trigger: GTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 72 bp CCCTTGGCCCTTTATCCAAGTGGAAGGCCCCAGGCCTaGCATGCAGTCCACCTGGGTGCAGCAAAATCTGGC +
Preference number: 3 (lower is better)
Translates to: PLALYPSGRPQA*HAVHLGAAKSG
Trigger: GCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp TGGCAGCAAGCCCCAAGCCAAGCTGGGTCTGGAGCTTaGCAGTGGGGCAACCCATCATTCATGGTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: WQQAPSQAGSGA*QWGNPSFMVPV
Trigger: GACTGGCACCATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTTGGGGCTTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp CCTGCAGTGGCAGCAAGCCCCAAGCCAAGCTGGGTCTaGAGCTTGGCAGTGGGGCAACCCATCATTCATGGT +
Preference number: 3 (lower is better)
Translates to: PAVAASPKPSWV*SLAVGQPIIHG
Trigger: ACCATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTTGGGGCTTGCTGCCACTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp CCTACATCTTGCCCTTCCCTTGGCCCTTTATCCAAGTaGAAGGCCCCAGGCCTGCCATGCAGTCCACCTGGG +
Preference number: 3 (lower is better)
Translates to: PTSCPSLGPLSK*KAPGLPCSPPG
Trigger: CCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGGAAGGGCAAGATGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCAAGCTCCGCGAGGCCTaGGCTTCAGACCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSKLREA*ASDHLK
Trigger: TTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTT...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR TCA 72 bp AGGCACACTGGTGGCACCTCAGAGGTAAAGCGTCAGTaGAAGGTGAGCCTAGGTGTCACTGGCGCACATTCC +
Preference number: 3 (lower is better)
Translates to: RHTGGTSEVKRQ*KVSLGVTGAHS
Trigger: GGAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAGGTGCCACCAGTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTaGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: ILSVGILQQTPA*LQQLSYHSLPP
Trigger: GGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR CCA 72 bp GCATCTTTCCACATAGGGTGGTCATTTGACCTGCAGTaGCAGCAAGCCCCAAGCCAAGCTGGGTCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: ASFHIGWSFDLQ*QQAPSQAGSGA
Trigger: AGCTCCAGACCCAGCTTGGCTTGGGGCTTGCTGCCACTGCAGGTCAAATGACCACCCTATGTGGAAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp TCTCCCTTTCTGAGGCTCAAGGGGTCACGGCCAGTATaGGACAGGCAGCACTGCTGCATCTTTCCACATAGG +
Preference number: 3 (lower is better)
Translates to: SPFLRLKGSRPV*DRQHCCIFPHR
Trigger: CCTATGTGGAAAGATGCAGCAGTGCTGCCTGTCCCATACTGGCCGTGACCCCTTGAGCCTCAGAAAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp CTCAGTCCCTCGGGGATCCCTATGAAGGCACACTGGTaGCACCTCAGAGGTAAAGCGTCAGTGAAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: LSPSGIPMKAHW*HLRGKASVKGE
Trigger: CTCACCTTTCACTGACGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGGGACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 72 bp AAACAACACTCAAGCTCAGTCCCTCGGGGATCCCTATaGAGGCACACTGGTGGCACCTCAGAGGTAAAGCGT +
Preference number: 3 (lower is better)
Translates to: KQHSSSVPRGSL*RHTGGTSEVKR
Trigger: ACGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGGGACTGAGCTTGAGTGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp AAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAGCGAACCACCTTAGAG +
Preference number: 3 (lower is better)
Translates to: KQGDTQRSSARP*LQTTSKRTTLE
Trigger: CTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CAA 90 bp CTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTGGCGCACATTCATGACAGTCAGAAGCTaGGGGGCACTCCTTTCCACA +
Preference number: 3 (lower is better)
Translates to: LRGKASVKGEPRCHWRTFMTVRS*GALLST
Trigger: TGTGGAAAGGAGTGCCCCCAAGCTTCTGACTGTCAT...GAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGAGGGCCTCTTTTACTTaGGGTGTTGGGTTAGGGGCT +
Preference number: 3 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKRASFT*GVGLGA
Trigger: AGCCCCTAACCCAACACCCAAAGTAAAAGAGGCCCT...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACAAGCTCCGCGAGGCCTaGGCTTCAGACCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADKLREA*ASDHLK
Trigger: TTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTT...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGAAGCTCCCCTTAGTGTaGCTGATGGAAGCAATGTCC +
Preference number: 3 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKKLPLV*LMEAMS
Trigger: GGACATTGCTTCCATCAGCAACACTAAGGGGAGCTT...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp CTTCTGCAGAACTCCCAAGAGGCAGTGTGTTTTGCCTaGTGTGAGGCAAGTCCTAGGTCATCATATGTGCAC +
Preference number: 3 (lower is better)
Translates to: LLQNSQEAVCFA*CEASPRSSYVH
Trigger: GTGCACATATGATGACCTAGGACTTGCCTCACACCAGGCAAAACACACTGCCTCTTGGGAGTTCTGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp CCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCATACACTTCCCTCTTCTaGACTTCTCCCTTGACTGTG +
Preference number: 3 (lower is better)
Translates to: PLVLLMEAMSSSGLRLYPYTSLF*TSPLTV
Trigger: CACAGTCAAGGGAGAAGTCAAGAAGAGGGAAGTGTA...TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp GGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTaGCGCACATTCCTAATCAAGAGATGCATGTTGCCT +
Preference number: 3 (lower is better)
Translates to: GKASVKGEPRCH*RTFLIKRCMLP
Trigger: AGGCAACATGCATCTCTTGATTAGGAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGCTGTCTTATCAAGGTTaGTGTCTGATGAGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKLSYQG*CLMRKQ
Trigger: CTGCTTCCTCATCAGACACAAACCTTGATAAGACAG...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTCCTCAACATCTTCACTaGGGCAACAGGTGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCIPQHLH*GNRWKQ
Trigger: CTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGG...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp GTTCTAATTCTGAGCACCTCGTGGCAAATGTCTGACTaGATGGACCTCTTGTTTGTACAGTTCAACCGCTGC +
Preference number: 3 (lower is better)
Translates to: VLILSTSWQMSD*MDLLFVQFNRC
Trigger: GCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCACGAGGTGCTCAGAATTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGAGAAAAATTAACGTCTaGCTTGGGTACAGCAAGATT +
Preference number: 3 (lower is better)
Translates to: CTVEEILSVGILQQTPAWRKINV*LGYSKI
Trigger: AATCTTGCTGTACCCAAGCAAGACGTTAATTTTTCT...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CAA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCC +
Preference number: 3 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRRKYSL*ESSSRP
Trigger: GGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCT...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR CCA 72 bp TTTATCAAGAGTCCTCTATATCACACACGGGTTCGATaGGACCACTCCCTGGAGATTCTGTATACTCTAGGG +
Preference number: 3 (lower is better)
Translates to: FIKSPLYHTRVR*DHSLEILYTLG
Trigger: CCCTAGAGTATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR CCA 72 bp AGCTGGAAGCAGACAGTTCTAATTCTGAGCACCTCGTaGCAAATGTCTGACTGGATGGACCTCTTGTTTGTA +
Preference number: 3 (lower is better)
Translates to: SWKQTVLILSTS*QMSDWMDLLFV
Trigger: TACAAACAAGAGGTCCATCCAGTCAGACATTTGCCACGAGGTGCTCAGAATTAGAACTGTCTGCTTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGAGAGGAGTCCTAGGGTaGCAGAATCAGGGGCCACTA +
Preference number: 3 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLRGVLG*QNQGPL
Trigger: TAGTGGCCCCTGATTCTGCAACCCTAGGACTCCTCT...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAGTGGTCATCCACTGGTaGACTGGTGAGTCAGAGTAT +
Preference number: 3 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTVVIHW*TGESEY
Trigger: ATACTCTGACTCACCAGTCAACCAGTGGATGACCAC...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp TCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTTGCCCGACTGGATGGACCTCTaGTTTGTACAGTTCAACCGC +
Preference number: 3 (lower is better)
Translates to: SFHNSKLLINCSLTYILPDWMDL*FVQFNR
Trigger: GCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTC...GGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp ATCATCCACAAAGATTACAGCCTCAACATCTTCACTTaGGCAACAGGTGGAAGCAGCAAACTGAGTCAACAG +
Preference number: 3 (lower is better)
Translates to: IIHKDYSLNIFT*ATGGSSKLSQQ
Trigger: CTGTTGACTCAGTTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTGGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTAAAGCTCCGCGAGGCCTaGGCTTCAGACCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVKLREA*ASDHLK
Trigger: TTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTT...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CAA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAATCAAGAGATGCATGTaGCCTCATGCACAGCTGACA +
Preference number: 3 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTIKRCM*PHAQLT
Trigger: TGTCAGCTGTGCATGAGGCAACATGCATCTCTTGAT...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 72 bp CTGAATACCCTGTCATTATCAAGTTACATAACTTCCTaGCCTTTTTGCCTTAGTGCCAGGAGGCTCAGGACT +
Preference number: 3 (lower is better)
Translates to: LNTLSLSSYITS*PFCLSARRLRT
Trigger: AGTCCTGAGCCTCCTGGCACTAAGGCAAAAAGGTCAGGAAGTTATGTAACTTGATAATGACAGGGTATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 72 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTaGTCCCTGACCTACATCTTGCCCTTCCCTTGGCCC +
Preference number: 3 (lower is better)
Translates to: FNSFHNSKLLIN*SLTYILPFPWP
Trigger: GGGCCAAGGGAAGGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCC +
Preference number: 3 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQRKYSL*ESSSRP
Trigger: GGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCT...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR-3UTR CAA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAAAATACCGAAGTCTCTTaGAGCCACAGATTTACTTTC +
Preference number: 3 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKNTEVS*SHRFTF
Trigger: GAAAGTAAATCTGTGGCTCAAAGAGACTTCGGTATT...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR TCA 72 bp ATATATTTGGTTCGATTGAGGGCTTTTTCAGCCAGGTaGCCACTTTCATCTGTGATCTTCTCCCAATCAGTC +
Preference number: 3 (lower is better)
Translates to: IYLVRLRAFSAR*PLSSVIFSQSV
Trigger: GACTGATTGGGAGAAGATCACAGATGAAAGTGGTCACCTGGCTGAAAAAGCCCTCAATCGAACCAAATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549293.5
3UTR TCA 72 bp ATATCCCAGCTCCAACCTCCTGAAGGTTTATTTTCCTaGTGTTCAGGTAAAGTCACTCAACTAAATGGCAGC +
Preference number: 3 (lower is better)
Translates to: ISQLQPPEGLFS*CSGKVTQLNGS
Trigger: GCTGCCATTTAGTTGAGTGACTTTACCTGAACATCAGGAAAATAAACCTTCAGGAGGTTGGAGCTGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR GCA 72 bp CAAGAACTTGAAAACCTGACAGGCTTAAAGGTTACATaGCAGAGTGCTCTGCATCTTTATACTCTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: QELENLTGLKVT*QSALHLYTLSL
Trigger: CAGGGAAAGAGTATAAAGATGCAGAGCACTCTGGCATGTAACCTTTAAGCCTGTCAGGTTTTCAAGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR GCA 72 bp TTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTaGAGAAGGCCATGCTTTCCAGTAATGAACAATCTG +
Preference number: 3 (lower is better)
Translates to: FHLVLTTREEIL*RRPCFPVMNNL
Trigger: CAGATTGTTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR CCA 72 bp AGTAAATCTCTGCTTGGGGTTTTGAAATGGTTTATCTaGGATAGAATTGCCATCTCTTCCCATCCCACTTGG +
Preference number: 3 (lower is better)
Translates to: SKSLLGVLKWFI*DRIAISSHPTW
Trigger: CCAAGTGGGATGGGAAGAGATGGCAATTCTATCCCAGATAAACCATTTCAAAACCCCAAGCAGAGATTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp CAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTaGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: QFQMVSQIPKCW*FSAIQNFFKLS
Trigger: TGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp AAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTaGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTC +
Preference number: 3 (lower is better)
Translates to: KQFQMVSQIPKC*WFSAIQNFFKL
Trigger: GAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp CTGAAAAGTCAACGTAACTCTATAGGTCGCATATTCTTGAATGACAGGGAAAGGACAATTATGCATATGTaGGGTAGGCTGTGCCACATA +
Preference number: 3 (lower is better)
Translates to: LKSQRNSIGRIFLNDRERTIMHM*GRLCHI
Trigger: TATGTGGCACAGCCTACCCAACATATGCATAATTGT...CCTTTCCCTGTCATTCAAGAATATGCGACCTATAGAGTTACGTTGACTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CAA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGTGTCATCCAGCTTATTaGACCAGAGTTTCCAGAGAC +
Preference number: 3 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLCHPAY*TRVSRD
Trigger: GTCTCTGGAAACTCTGGTCAAATAAGCTGGATGACA...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR-3UTR CAA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGAGAAAAATTAACGTCTaGCTTGGGTACAGCAAGATT +
Preference number: 3 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRRKINV*LGYSKI
Trigger: AATCTTGCTGTACCCAAGCAAGACGTTAATTTTTCT...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR GCA 72 bp AAATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATaGATATGTTGGGTAGGCTGTGCCACATATCTGCTG +
Preference number: 3 (lower is better)
Translates to: KFGDLVAKKRQL*ICWVGCATYLL
Trigger: CAGCAGATATGTGGCACAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR-3UTR CAA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTTCTTGACTTCTCCCTaGACTGTGATCACAAAGAGT +
Preference number: 3 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIFLTSP*TVITKS
Trigger: ACTCTTTGTGATCACAGTCAAGGGAGAAGTCAAGAA...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CCA 72 bp GATTCTTATCTGTATTTTCCCTTGAAAATGTATCAGTaGGCCTTCCATAGCAAGTCACCTCAAATCCTTTCT +
Preference number: 3 (lower is better)
Translates to: DSYLYFPLKMYQ*AFHSKSPQILS
Trigger: AGAAAGGATTTGAGGTGACTTGCTATGGAAGGCCCACTGATACATTTTCAAGGGAAAATACAGATAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAGGGCATGCCAGGTGGTaGCACTGTAGCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPGHARW*HCSREG
Trigger: GCCCTCCCTGCTACAGTGCCACCACCTGGCATGCCC...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCGCCAGCCCTCCGAGGTaGTCCCCTTTCTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLASPPR*SPFSAA
Trigger: GGCAGCCGAGAAAGGGGACCACCTCGGAGGGCTGGC...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAAGGCTGGTGGCTCAGTaGAGGAGCTGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPRLVAQ*RSWQRH
Trigger: ATGCCTCTGCCAGCTCCTTCACTGAGCCACCAGCCT...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCGCCAGCCCTCCGAGGTaGTCCCCTTTCTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTASPPR*SPFSAA
Trigger: GGCAGCCGAGAAAGGGGACCACCTCGGAGGGCTGGC...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTATCCTGGGCCTCGACTaGTTGCCTGGCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPILGLD*LPGRDL
Trigger: GAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGAT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCATCCTGGGCCTCGACTaGTTGCCTGGCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTILGLD*LPGRDL
Trigger: GAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGAT...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCCCATGTCTCCCTTTCTaGGGCTCAAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVPCLPF*GSRGHG
Trigger: GCCGTGACCCCTTGAGCCTCAGAAAGGGAGACATGG...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGTCCCCTCTCCTGACTaGCAGCCCTCCGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQVPSPD*QPSEVV
Trigger: GACCACCTCGGAGGGCTGGCAGTCAGGAGAGGGGAC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCGCGCAGGGCTCGTCCTaGCGCCGTTACTCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSAQGSS*RRYSSQ
Trigger: TTGCGACGAGTAACGGCGCCAGGACGAGCCCTGCGC...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGGGCATGCCAGGTGGTaGCACTGTAGCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQGHARW*HCSREG
Trigger: GCCCTCCCTGCTACAGTGCCACCACCTGGCATGCCC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCATGGAGGTGGTGGTATTaGGACAGGTGGCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPWRWWY*DRWPGH
Trigger: GTGACCAGGCCACCTGTCCCAATACCACCACCTCCA...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR CAA 72 bp GTGGCAGCAAGCCCCAAGCCAAGCTGGGTCTGGAGCTaGGCAGTGGGGCAACCCATCATTCATGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VAASPKPSWVWS*AVGQPIIHGAS
Trigger: ACTGGCACCATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTTGGGGCTTGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGTCTCCTTAAGTTACTaGGAGCCAGGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVVSLSY*EPGQPG
Trigger: CCCAGGCTGCCCTGGCTCTCAGTAACTTAAGGAGAC...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGTGGTCCTCTCTCCCTaGTCCCAGCTCTTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTVVLSP*SQLFGV
Trigger: CACCCCGAAGAGCTGGGAGCAGGGAGAGAGGACCAC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAAGTTGGGATTTAGAATaGCCCTGGGAGGGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPSWDLE*PWEGRE
Trigger: TTCCCGCCCCTCCCAGGGCCATTCTAAATCCCAACT...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCATGGCACTTCCTCATTTaGAGGTGGCAATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPWHFLI*RWQWGL
Trigger: GAGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCA...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCTCGACTCGTGGAGCTaGAGGAGGCTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPLDSWS*RRLVAQ
Trigger: CTGAGCCACCAGCCTCCTCCAGCTCCACGAGTCGAG...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGAAGGTGGTGGGGCTaGAGCACGCACTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAGRWWG*STHCIC
Trigger: GCAAATGCAGTGCGTGCTTCAGCCCCACCACCTTCC...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAACTGCAGTGATTGGCTaGGATGGAGCAGCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPTAVIG*DGAAED
Trigger: GTCTTCAGCTGCTCCATCTCAGCCAATCACTGCAGT...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCATTCTGGTGCATCTGCTaGAGCTGCTGGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPFWCIC*SCWSCA
Trigger: GGCGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAA...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATGGGCCTCGACTGATTaGCTGGCCGCGACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAWASTD*LAATSV
Trigger: AACAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCA...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAGCGCAGGGCTCGTCCTaGCGCCGTTACTCGTCGCAA +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRAQGSS*RRYSSQ
Trigger: TTGCGACGAGTAACGGCGCCAGGACGAGCCCTGCGC...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCATGGTGGTGGAGCATCTaGTGTTTGTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPWWWSI*CLYCCC
Trigger: GCAGCAGCAGTACAAACACCAGATGCTCCACCACCA...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTGGGTGGCGGCTGAGGTaGGGGCATGTAAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPGWRLR*GHVRLR
Trigger: TCTCAGTCTTACATGCCCCCACCTCAGCCGCCACCC...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGACTCGATGCTGCTaGTGCTGCTGCCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPPTRCC*CCCQCA
Trigger: AGCACACTGGCAGCAGCACCAGCAGCATCGAGTCGG...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCCCGACTCGATGCTGCTaGTGCTGCTGCCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTPTRCC*CCCQCA
Trigger: AGCACACTGGCAGCAGCACCAGCAGCATCGAGTCGG...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCAGGTGGCATAACAGGTaGGGGCATGCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSRWHNR*GHARWW
Trigger: CCACCACCTGGCATGCCCCCACCTGTTATGCCACCT...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTAGGTGGCATAACAGGTaGGGGCATGCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPRWHNR*GHARWW
Trigger: CCACCACCTGGCATGCCCCCACCTGTTATGCCACCT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCGCGAGCTCTGTGAACTaGAGGCTGGTGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSASSVN*RLVELG
Trigger: CCCCAGTTCCACCAGCCTCCAGTTCACAGAGCTCGC...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGGTTCGCGGAAGCTCATaGAGCCCGAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPVRGSS*SPRRRG
Trigger: CCCCCTCCTCCTCGGGCTTCATGAGCTTCCGCGAAC...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCCTGTCCTGGCTCCCTTaGAGACCACCTGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTLSWLP*RPPGTF
Trigger: GAAAGTGCCAGGTGGTCTTCAAGGGAGCCAGGACAG...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACTGTCCTGGCTCCCTTaGAGACCACCTGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASALSWLP*RPPGTF
Trigger: GAAAGTGCCAGGTGGTCTTCAAGGGAGCCAGGACAG...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGGCAGGAGAATCACTTaGACCCAGGAGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVGRRIT*TQEVDV
Trigger: AACATCCACCTCCTGGGTTCAAGTGATTCTCCTGCC...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAAACGGAGCGCGCCAGTaGGCCGGCGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRNGARQ*AGAPEL
Trigger: CAGCTCGGGAGCGCCGGCGCACTGGCGCGCTCCGTT...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCTGCTTCTGGTGCATCTaGTGCAGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSCFWCI*CSCWSC
Trigger: GCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCA...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGGCTCAGGGGCGGCTTaGTGCTGTTCAGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSGSGAA*CCSVLL
Trigger: CAAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACTCGATGCTGCTGGTaGTGCTGCCAGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTTRCCW*CCQCAA
Trigger: AGCAGCACACTGGCAGCAGCACCAGCAGCATCGAGT...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTGGGCCTCGACTGATTaGCTGGCCGCGACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAWASTD*LAATSV
Trigger: AACAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCA...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAGTCCCCTTTCTCGACTaGCAGGCCCTCGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRVPFLD*QALEVV
Trigger: GACCACCTCGAGGGCCTGGCAGTCGAGAAAGGGGAC...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAATTCTCTCAGGTCTaGTCTCCCGGCCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPQFSQV*SPGPVV
Trigger: AACCACCGGGCCGGGAGAGCAGACCTGAGAGAATTG...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGACAGGCAGCACTGCTaGATCTTTCCACATAGGGTG +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVDRQHC*IFPHRV
Trigger: CACCCTATGTGGAAAGATGCAGCAGTGCTGCCTGTC...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCGCCCCAGGCCTGCCATaGAGTCCACCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRAPGLP*SPPGCS
Trigger: GCTGCACCCAGGTGGACTGCATGGCAGGCCTGGGGC...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCTGGCACTTCCTCATTTaGAGGTGGCAATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLWHFLI*RWQWGL
Trigger: GAGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCA...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGATGGGGGCATGCCAGGTaGTGGCACTGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRWGHAR*WHCSRE
Trigger: CTCCCTGCTACAGTGCCACCACCTGGCATGCCCCCA...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGAAGGAGGCATCCCTaGTGGGGGAACAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSRRRHP*WGNRGW
Trigger: CCAACCTCTGTTCCCCCACCAGGGATGCCTCCTTCT...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCCTTGAAGACCACCTaGCACTTTCTCCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLPLKTT*HFLPTA
Trigger: AGCAGTCGGGAGAAAGTGCCAGGTGGTCTTCAAGGG...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCAGGAGGTGGAGGTGGTaGTATTGGGACAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSRRWRW*YWDRWP
Trigger: AGGCCACCTGTCCCAATACCACCACCTCCACCTCCT...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCCATACCCATAGGCACTaGGCCAGGAGGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSHTHRH*ARRGNG
Trigger: TCCATTCCCCCTCCTGGCCCAGTGCCTATGGGTATG...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCATACCCATAGGCACTaGGCCAGGAGGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPHTHRH*ARRGNG
Trigger: TCCATTCCCCCTCCTGGCCCAGTGCCTATGGGTATG...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCATACCCATAGGCACTaGGCCAGGAGGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSHTHRH*ARRGNG
Trigger: TCCATTCCCCCTCCTGGCCCAGTGCCTATGGGTATG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTSSARP*LQTTSK
Trigger: CTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCT...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCCACTGGTGGTGGCAATaGAGGAGGCAACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSHWWWQ*RRQHWR
Trigger: CCTCCAGTGTTGCCTCCTTCATTGCCACCACCAGTG...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAACTTGCGAGCTCTGTaGACTGGAGGCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTNLRAL*TGGWWN
Trigger: GTTCCACCAGCCTCCAGTTCACAGAGCTCGCAAGTT...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACTGAGATGGAGCAGCTaGAGACTCCCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPLRWSS*RLPKSL
Trigger: CAAGGACTTGGGGAGTCTTCAGCTGCTCCATCTCAG...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCGCCTATCTCCATCATaGGACCGAGATGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPRLSPS*DRDGGA
Trigger: AGCACCACCATCTCGGTCTCATGATGGAGATAGGCG...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGCGGCGGATAGTGGCTaGTCCCGCCATACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAAADSG*SRHTGP
Trigger: GGGGCCGGTATGGCGGGAGCAGCCACTATCCGCCGC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATGGCTCAGGGGCGGCTTaGTGCTGTTCAGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYGSGAA*CCSVLL
Trigger: CAAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCC...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCACTCGATGCTGCTGGTaGTGCTGCCAGTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSTRCCW*CCQCAA
Trigger: AGCAGCACACTGGCAGCAGCACCAGCAGCATCGAGT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTGCACTTTCTCCCGACTaGTTCCAGGCCTCACCAACC +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVALSPD*FQASPT
Trigger: GGTTGGTGAGGCCTGGAAGCAGTCGGGAGAAAGTGC...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCATCTGCTGCAGCTGCTaGAGCTGCGCCAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSICCSC*SCAKCC
Trigger: ACAGCACTTGGCGCAGCTCCAGCAGCTGCAGCAGAT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAGGAGGCCCGTCTCGTTaGTGGTGGAGCATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRGGPSR*WWSIWC
Trigger: ACACCAGATGCTCCACCACCAACGAGACGGGCCTCC...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGGATTCCAGCTCCATTaGAACCAAACCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTGFQLH*NQTRRP
Trigger: GGGCCTCCTGGTTTGGTTCCAATGGAGCTGGAATCC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGCATCGTAGAGGGATCTaGCTCAGGGGCGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMHRRGI*LRGGLL
Trigger: CAGCAAGCCGCCCCTGAGCCAGATCCCTCTACGATG...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGCATCGTAGAGGGATCTaGCTCAGGGGCGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLHRRGI*LRGGLL
Trigger: CAGCAAGCCGCCCCTGAGCCAGATCCCTCTACGATG...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACAAAACGAGGCCCTTTaGGTCTCGGTCCTTCACACC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAQNEAL*VSVLHT
Trigger: GGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTG...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGGTGACCTTCATATCTaGGTCTTGGCCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSGDLHI*VLAHRG
Trigger: GCCCCGATGGGCCAAGACCCAGATATGAAGGTCACC...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCGCTCTTCTCCATaGTTCCATGGAGCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPPRSSP*FHGALG
Trigger: TCCTAGGGCTCCATGGAACCATGGAGAAGAGCGAGG...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCATATCTATCCAAAGGTaGAAGAGGTGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLISIQR*KRWEGR
Trigger: CCGCCCCTCCCACCTCTTCCACCTTTGGATAGATAT...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTTTTAGTACCAGTCCTCGACTCGTGGAGCTaGAGGAGGCTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSILLAMASQSRFLLVPVLDSWS*RRLVAQ
Trigger: CTGAGCCACCAGCCTCCTCCAGCTCCACGAGTCGAG...GACTGGTACTAAAAGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGCTCTCCCGGCCCGGTaGTTTCAAAATATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAALPAR*FQNIVH
Trigger: GTGGACGATATTTTGAAACCACCGGGCCGGGAGAGC...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCGCTCTCCCGGCCCGGTaGTTTCAAAATATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTALPAR*FQNIVH
Trigger: GTGGACGATATTTTGAAACCACCGGGCCGGGAGAGC...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCCCATTCTGCTGGCAATaGCCTCCCAGTCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSPFCWQ*PPSHVS
Trigger: GGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGG...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCCATTCTGCTGGCAATaGCCTCCCAGTCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSPFCWQ*PPSHVS
Trigger: GGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTGGCGCACATTCGCTGGGTCTGGAGCTTaGCAGTGGGGCAACCCATCA +
Preference number: 4 (lower is better)
Translates to: LRGKASVKGEPRCHWRTFAGSGA*QWGNPS
Trigger: TGATGGGTTGCCCCACTGCCAAGCTCCAGACCCAGC...GAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CTCAGAGGTAAAGCGTCAGTGAAAGGTGAGCCTAGGTGTCACTGGCGCACATTCGGCCCTTTATCCAAGTaGAAGGCCCCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRGKASVKGEPRCHWRTFGPLSK*KAPGLP
Trigger: TGGCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCC...GAATGTGCGCCAGTGACACCTAGGCTCACCTTTCACTGACGCTTTACCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAAGAGGTGGAGGCATCTaGGAATATGGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPRGGGI*EYGTKG
Trigger: TCCTTTTGTTCCATATTCTCAGATGCCTCCACCTCT...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCACTGCAGTGATTGGCTaGGATGGAGCAGCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSTAVIG*DGAAED
Trigger: GTCTTCAGCTGCTCCATCTCAGCCAATCACTGCAGT...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTGTCCTTCACTGCAGTaGTTGGCTGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSCPSLQ*LAEMEQ
Trigger: CTGCTCCATCTCAGCCAATCACTGCAGTGAAGGACA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCATGCTGCCTCTGACTaGGAACCATTACCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSHAASD*EPLPLQ
Trigger: TTGGAGGGGTAATGGTTCTCAGTCAGAGGCAGCATG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGGTCACAGGAACAGATaGTCTTGCTGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTGHRNR*SCWWSR
Trigger: TCTGCTCCACCAGCAAGATCATCTGTTCCTGTGACC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGAGGCTGGTGGCTCAGTaGAGGAGCTGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPRLVAQ*RSWQRH
Trigger: ATGCCTCTGCCAGCTCCTTCACTGAGCCACCAGCCT...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCTAGACGCATCATGTaGCGAGGTGCAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTSRRIM*RGAVSQ
Trigger: CTGGGAAACTGCACCTCGTCACATGATGCGTCTAGA...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTCTAGACGCATCATGTaGCGAGGTGCAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPSRRIM*RGAVSQ
Trigger: CTGGGAAACTGCACCTCGTCACATGATGCGTCTAGA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGCATTACCTCCCAGATaGTCAAGTGGTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVALPPR*SSGSAT
Trigger: AGTTGCTGAACCACTTGATCATCTGGGAGGTAATGC...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCTGTGCTGCTGCAGCCTaGAACTGCTTTAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTCAAAA*NCFNLA
Trigger: TGCCAGGTTAAAGCAGTTGCAGGCTGCAGCAGCACA...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCCGTCCCCTCTCCTGACTaGCAGCCCTCCGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSSVIFSQSVCPTTKPMAVPSPD*QPSEVV
Trigger: GACCACCTCGGAGGGCTGGCAGTCAGGAGAGGGGAC...GGCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACAATTCTCTCAGGTCTaGTCTCCCGGCCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRQFSQV*SPGPVV
Trigger: AACCACCGGGCCGGGAGAGCAGACCTGAGAGAATTG...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCACCCATCATTCATGGTaGCAGTCTGGGTTAGGATTC +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVTHHSW*QSGLGF
Trigger: GAATCCTAACCCAGACTGGCACCATGAATGATGGGT...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGGGAGGCCCGTCTCGTTaGTGGTGGAGCATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPGGPSR*WWSIWC
Trigger: ACACCAGATGCTCCACCACCAACGAGACGGGCCTCC...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGGTAGGATTGGGAAGGTaGGGACTGCGAAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPVGLGR*GLRRGR
Trigger: CCGTCCCCTTCGCAGTCCCCACCTTCCCAATCCTAC...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGATTTAGAATGGCCCTaGGAGGGGCGGGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSDLEWP*EGREGD
Trigger: ATCTCCTTCCCGCCCCTCCCAGGGCCATTCTAAATC...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTATTTGGAGGTGGCAATaGGGGCTCCTCAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPIWRWQ*GLLRRR
Trigger: CCTTCTTCTGAGGAGCCCCCATTGCCACCTCCAAAT...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATTTGGAGGTGGCAATaGGGGCTCCTCAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSIWRWQ*GLLRRR
Trigger: CCTTCTTCTGAGGAGCCCCCATTGCCACCTCCAAAT...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGTCCAAAAGCTGGTTTaGGGCCTTTCCACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQVQKLV*GLSTVV
Trigger: GACCACAGTGGAAAGGCCCCAAACCAGCTTTTGGAC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTTGCTTGACCAATCCTaGGCCTCGACTGATTGCCTG +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSLLDQS*ASTDCL
Trigger: CAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGCCAGGCCCTCGAGGTaGTCCTCTCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRARPSR*SSLPAP
Trigger: GGGAGCAGGGAGAGAGGACCACCTCGAGGGCCTGGC...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCGCCAGGCCCTCGAGGTaGTCCTCTCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGARPSR*SSLPAP
Trigger: GGGAGCAGGGAGAGAGGACCACCTCGAGGGCCTGGC...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGAGGTCTATACGACCCTaGAGGCGGATACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQRSIRP*RRIHSR
Trigger: CCTGGAATGTATCCGCCTCCAGGGTCGTATAGACCT...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGAGGAGGTGGAGGTGGTaGTATTGGGACAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLRRWRW*YWDRWP
Trigger: AGGCCACCTGTCCCAATACCACCACCTCCACCTCCT...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTGGCTTGGACATTGGTaGCATACCCATAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPWLGHW*HTHRHW
Trigger: CCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTGGTGGCTTGGACATTaGTGGCATACCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQWWLGH*WHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCTGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSWSFID*SVRLPV
Trigger: GACCGGAAGTCTGACCGACCAGTCTATGAAGGACCA...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATCTCGACTCGTGGAGCTaGAGGAGGCTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYLDSWS*RRLVAQ
Trigger: CTGAGCCACCAGCCTCCTCCAGCTCCACGAGTCGAG...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGCTTCTTCTCGACTCGTaGAGCTGGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMLLLDS*SWRRLV
Trigger: CACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAG...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR CAA 72 bp AATAAACTGCTCCCTGACCTACATCTTGCCCTTCCCTaGGCCCTTTATCCAAGTGGAAGGCCCCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NKLLPDLHLALP*ALYPSGRPQAC
Trigger: GCAGGCCTGGGGCCTTCCACTTGGATAAAGGGCCAAGGGAAGGGCAAGATGTAGGTCAGGGAGCAGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGCTGCTTCTGATAGCTaGGGGCCGGCCCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRAASDS*GPARVA
Trigger: CGCCACCCGGGCCGGCCCTCAGCTATCAGAAGCAGC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTGGAGATTCTGGAACTTaGCTGGTGGCAGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPGDSGT*LVAGTV
Trigger: TACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCC...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTGTTCCTCCCATAGCTaGAACTCTCGCTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSCSSHS*NSRSHS
Trigger: AGAATGGGAGCGAGAGTTTCAGCTATGGGAGGAACA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGGGCTGCTGTTAACTaGGGAGGTATCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLGAAVN*GGIPCG
Trigger: TCCACAAGGGATACCTCCTCAGTTAACAGCAGCCCC...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGAACTTGCGAGCTCTGTaGACTGGAGGCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLNLRAL*TGGWWN
Trigger: GTTCCACCAGCCTCCAGTTCACAGAGCTCGCAAGTT...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CATCGGGGAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACACTGCAGTGATTGGCTaGGATGGAGCAGCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: HRGAEDNPPFCWQWPPSHTAVIG*DGAAED
Trigger: GTCTTCAGCTGCTCCATCTCAGCCAATCACTGCAGT...GTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTCCCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTGACTTAGGTTGCTGCTaGTGCTGCTGTCCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPDLGCC*CCCPKA
Trigger: AGCTTTTGGACAGCAGCATCAGCAGCAACCTAAGTC...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGAAAGTCTTCTTGCTTaGCCAATCCTGGGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWESLLA*PILGLD
Trigger: GTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTC...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCATCACGACCAAAATCTaGTCTTCCCAGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLITTKI*SSQSPF
Trigger: GAAAGGGGACTGGGAAGATCAGATTTTGGTCGTGAT...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATGCAATCTTGATTCCTaGGGTGGTAGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASACNLDS*GGRWSA
Trigger: GGCTGACCATCTACCACCTCAGGAATCAAGATTGCA...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGCGGCGGATAGTGGCTaGTCCCGCCATACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRAADSG*SRHTGP
Trigger: GGGGCCGGTATGGCGGGAGCAGCCACTATCCGCCGC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTGGAGCTGCGCCAAGTaGTGTTCGCGGAAGCTCATG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPWSCAK*CSRKLM
Trigger: CATGAGCTTCCGCGAACAGCACTTGGCGCAGCTCCA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTGCATTTGCTTCTGGTaGATCTGCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFCICFW*ICCSCW
Trigger: CCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCAGGAGTAGGAAGCAGTaGTGGTCTAGGTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTRSRKQ*WSRFLW
Trigger: CCAGAGAAACCTAGACCAGCACTGCTTCCTACTCCT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTCAATTCTCTCAGGTCTaGTCTCCCGGCCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QESSISHTGSMGPLPGDSQFSQV*SPGPVV
Trigger: AACCACCGGGCCGGGAGAGCAGACCTGAGAGAATTG...AGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp TCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTTTTAGTACCAGTCCAATTCTCTCAGGTCTaGTCTCCCGGCCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSILLAMASQSRFLLVPVQFSQV*SPGPVV
Trigger: AACCACCGGGCCGGGAGAGCAGACCTGAGAGAATTG...GACTGGTACTAAAAGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCATCATGTGACGAGGTaGAGTTTCCCAGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSHHVTR*SFPVIS
Trigger: GCTGATCACTGGGAAACTGCACCTCGTCACATGATG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACATCATGTGACGAGGTaGAGTTTCCCAGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAHHVTR*SFPVIS
Trigger: GCTGATCACTGGGAAACTGCACCTCGTCACATGATG...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTTCTCTTCCAGGTCTaGCCATCTGACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSLLFQV*PSDPLL
Trigger: AAGAAGAGGGTCAGATGGGCAGACCTGGAAGAGAAG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCATCTGCTGCAGCTGCTaGAGCTGCGCCAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRICCSC*SCAKCC
Trigger: ACAGCACTTGGCGCAGCTCCAGCAGCTGCAGCAGAT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCGCAACTGCTTTAACCTaGCATCTTCTTCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLATALT*HLLLGP
Trigger: AGGACCCAGAAGAAGATGCCAGGTTAAAGCAGTTGC...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCGGAGATAGCTCTGAGTaGCTTTCATATGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTGDSSE*LSYVPA
Trigger: GGCAGGGACATATGAAAGCCACTCAGAGCTATCTCC...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACGGGCATGCCAGGTGGTaGCACTGTAGCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADGHARW*HCSREG
Trigger: GCCCTCCCTGCTACAGTGCCACCACCTGGCATGCCC...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCAGGAGGTATCCCTTGTaGAACTCCAGGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSRRYPL*NSRGRY
Trigger: ATACCTCCCCCTGGAGTTCCACAAGGGATACCTCCT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGCAAAACGAGGCCCTTTaGGTCTCGGTCCTTCACACC +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMQNEAL*VSVLHT
Trigger: GGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTG...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCTTTAGTGCCCTCTGCTaGGTGACCTTCATATCTGGG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSFSALC*VTFISG
Trigger: CCCAGATATGAAGGTCACCCAGCAGAGGGCACTAAA...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCTGCTGTCCAAAAGCTaGTTTGGGGCCTTTCCACTG +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLALLSKS*FGAFPL
Trigger: CAGTGGAAAGGCCCCAAACCAGCTTTTGGACAGCAG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCTTCTCCATGGTTCCATaGAGCCCTAGGAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSFSMVP*SPRRLI
Trigger: GATGAGCCTCCTAGGGCTCCATGGAACCATGGAGAA...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTATGGTCAGCCATCTGTaGCTCAGACCCGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPMVSHL*LRPEVF
Trigger: AAAGACTTCGGGTCTGAGCCACAGATGGCTGACCAT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTTGGGACAGGTGGCCTaGTCACAGGAACAGATGATC +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFLGQVA*SQEQMI
Trigger: GATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTTGGTATTGGGACAGGTaGCCTGGTCACAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVWYWDR*PGHRNR
Trigger: TCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCA...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCTGGTATTGGGACAGGTaGCCTGGTCACAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSWYWDR*PGHRNR
Trigger: TCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCA...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTGGAGGTGGTGGTATTaGGACAGGTGGCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRWRWWY*DRWPGH
Trigger: GTGACCAGGCCACCTGTCCCAATACCACCACCTCCA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTGGCTTGGACATTGGTaGCATACCCATAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWWLGHW*HTHRHW
Trigger: CCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTGGTGGCTTGGACATTaGTGGCATACCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSWWLGH*WHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCA...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASALLYWW*LGHWWH
Trigger: ATGCCACCAATGTCCAAGCCACCACCAGTACAACAG...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSSLLYW*WLGHWW
Trigger: CCACCAATGTCCAAGCCACCACCAGTACAACAGACT...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAWSFID*SVRLPV
Trigger: GACCGGAAGTCTGACCGACCAGTCTATGAAGGACCA...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
3UTR CAA 72 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSL*ESSSRPPPGFS
Trigger: GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGACTCCCCAAGTCCTTaGTCAGATGAGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSDSPSP*SDENEL
Trigger: CAGTTCATTCTCATCTGATCAAGGACTTGGGGAGTC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTGACTTAGGTTGCTGCTaGTGCTGCTGTCCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVDLGCC*CCCPKA
Trigger: AGCTTTTGGACAGCAGCATCAGCAGCAACCTAAGTC...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTTGACTGAGCCGCCTTaGCATCCTTTACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWLTEPP*HPLHLQ
Trigger: CTGCAGATGTAAAGGATGTCAAGGCGGCTCAGTCAA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTTTGACTGAGCCGCCTTaGCATCCTTTACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVLTEPP*HPLHLQ
Trigger: CTGCAGATGTAAAGGATGTCAAGGCGGCTCAGTCAA...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAATCACGACCAAAATCTaGTCTTCCCAGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAITTKI*SSQSPF
Trigger: GAAAGGGGACTGGGAAGATCAGATTTTGGTCGTGAT...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGCTCCTGGTTCTGGTCTaGATGGACCTCTATCACGAC +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLLLVLV*MDLYHD
Trigger: GTCGTGATAGAGGTCCATTCAGACCAGAACCAGGAG...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ATCGGGGAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTGGGTACCATCTGTCTaGCAACCGTTCTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IGELKIILHSAGNGLPVTWVPSV*QPFSFP
Trigger: TGGGAAAGAGAACGGTTGTCAGACAGATGGTACCCA...CGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTCCCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAATTTCATGCTGCCTCTaGCTGAGAACCATTACCCCT +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPISCCL*LRTITP
Trigger: AGGGGTAATGGTTCTCAGTCAGAGGCAGCATGAAAT...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTGCAATCTTGATTCCTaGGGTGGTAGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWCNLDS*GGRWSA
Trigger: GGCTGACCATCTACCACCTCAGGAATCAAGATTGCA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCAGAGGGTCTTACAATTaGACCTGGTGGTTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTRGSYN*TWWFAH
Trigger: ATGGGCAAACCACCAGGTTCAATTGTAAGACCCTCT...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTTGTCTCGATATGACTaGGCTCTATCATCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTLSRYD*ALSSRG
Trigger: ACCCCGAGATGATAGAGCTCAGTCATATCGAGACAA...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CAGGCCTGCCATGCAGTCCACCTGGGTGCAGCAAAATCTGGCACCACACTGGTCGGTGCAGTTTCCCAGTaGTCAGCCATCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: QACHAVHLGAAKSGTTLVGAVSQ*SAILFI
Trigger: AATAAATAAGATGGCTGATCACTGGGAAACTGCACC...GACCAGTGTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGCAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTGCTTTTTCAGCCAGGTaGCCACTTTCATCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPAFSAR*PLSSVI
Trigger: GATCACAGATGAAAGTGGTCACCTGGCTGAAAAAGC...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATGTCGATACCAATACTaGTGCTGTTCCTGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASACRYQY*CCSCGV
Trigger: GACTCCACAGGAACAGCAGCAGTATTGGTATCGACA...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATTGGCATGTCCTTCACTaGAGTGATTGGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYWHVLH*SDWLRW
Trigger: CCATCTCAGCCAATCACTGCAGTGAAGGACATGCCA...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTCCCGAAAGTCTTCTTaGTTGACCAATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWSRKSS*LTNPGP
Trigger: AGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGTCCCCTTTCTCGGCTaGCAGCTGCACCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAVPFLG*QLHPCP
Trigger: AGGACAGGGGTGCAGCTGGCAGCCGAGAAAGGGGAC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGTCCCCTTTCTCGGCTaGCAGCTGCACCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRVPFLG*QLHPCP
Trigger: AGGACAGGGGTGCAGCTGGCAGCCGAGAAAGGGGAC...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACGTCCCCTTTCTCGACTaGCAGGCCCTCGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADVPFLD*QALEVV
Trigger: GACCACCTCGAGGGCCTGGCAGTCGAGAAAGGGGAC...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAAATGGAAACTCTTCATaGCCTCGCTCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPNGNSS*PRSSPW
Trigger: CCATGGAGAAGAGCGAGGGCATGAAGAGTTTCCATT...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAATGGAAACTCTTCATaGCCTCGCTCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSNGNSS*PRSSPW
Trigger: CCATGGAGAAGAGCGAGGGCATGAAGAGTTTCCATT...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCTCACGTTGGCCTGCATaGTCTGTCTCAAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLSRWPA*SVSKVD
Trigger: ATCAACTTTTGAGACAGAGCATGCAGGCCAACGTGA...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCACGATCACGTTGGCCTaGATGCTCTGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTTITLA*MLCLKS
Trigger: ACTTTTGAGACAGAGCATGCAGGCCAACGTGATCGT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTCATCATGTGACGAGGTaGAGTTTCCCAGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVHHVTR*SFPVIS
Trigger: GCTGATCACTGGGAAACTGCACCTCGTCACATGATG...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTCTTCTCTTCCAGGTCTaGCCATCTGACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVLLFQV*PSDPLL
Trigger: AAGAAGAGGGTCAGATGGGCAGACCTGGAAGAGAAG...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGGCCCTTTTCCTATCTaGATCCTTCTTCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQGPFPI*ILLLFQ
Trigger: CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCAGGTGGTCATTTGACCTaGAGTGGCAGCAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLVLLMEAMSSSGLRLYPGGHLT*SGSKPQ
Trigger: TTGGGGCTTGCTGCCACTGCAGGTCAAATGACCACC...TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCTTCTTTTACCGGCTCTaGTGTATCCTTTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLFFYRL*CILCYH
Trigger: GTGGTAGCAAAGGATACACCAGAGCCGGTAAAAGAA...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGAGTAGGAAGCAGTGCTaGTCTAGGTTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQSRKQC*SRFLWN
Trigger: GTTCCAGAGAAACCTAGACCAGCACTGCTTCCTACT...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAAGTAGGAAGCAGTGCTaGTCTAGGTTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPSRKQC*SRFLWN
Trigger: GTTCCAGAGAAACCTAGACCAGCACTGCTTCCTACT...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCATGGTAAGTTGTCGGTaGGGCAGAACCAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTMVSCR*GRTKRH
Trigger: GTGTCTTTTGGTTCTGCCCCACCGACAACTTACCAT...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTTCTCCATGGTTCCATaGAGCCCTAGGAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMFSMVP*SPRRLI
Trigger: GATGAGCCTCCTAGGGCTCCATGGAACCATGGAGAA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTTCCTCATCCATATCCTaGTCTCTCTCCCAATCATCC +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPSSSIS*SLSQSS
Trigger: GGATGATTGGGAGAGAGACCAGGATATGGATGAGGA...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGAGGTCTATACGACCCTaGAGGCGGATACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMRSIRP*RRIHSR
Trigger: CCTGGAATGTATCCGCCTCCAGGGTCGTATAGACCT...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTTGGGACAGGTGGCCTaGTCACAGGAACAGATGATC +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMLGQVA*SQEQMI
Trigger: GATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGTTGGGACAGGTGGCCTaGTCACAGGAACAGATGATC +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLLGQVA*SQEQMI
Trigger: GATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAA...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLALLYWW*LGHWWH
Trigger: ATGCCACCAATGTCCAAGCCACCACCAGTACAACAG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLASLLYW*WLGHWW
Trigger: CCACCAATGTCCAAGCCACCACCAGTACAACAGACT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTCCTCCAAACATGGATaGTCCTTCATAGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQSSKHG*SFIDWS
Trigger: CGACCAGTCTATGAAGGACCATCCATGTTTGGAGGA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTGTTGACAGACTTCTTCTCGACTCGTaGAGCTGGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGNPLPPHSISSSASVDRLLLDS*SWRRLV
Trigger: CACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAG...TCTGTCAACAGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCGCTCTCCCGGCCCGGTaGTTTCAAAATATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFALPAR*FQNIVH
Trigger: GTGGACGATATTTTGAAACCACCGGGCCGGGAGAGC...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCCAGGCTTAGAACTCTaGGTGCAGGTCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYPGLEL*VQVLQI
Trigger: AATTTGGAGGACCTGCACCCAGAGTTCTAAGCCTGG...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAGATTCTAATACCTCTTaGGGACACTGGAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPDSNTS*GHWRTL
Trigger: TAAAGTTCTCCAGTGTCCCCAAGAGGTATTAGAATC...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAAGCCAAGCTGGGTCTaGAGCTTGGCAGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRKPSWV*SLAVGQ
Trigger: TTGCCCCACTGCCAAGCTCCAGACCCAGCTTGGCTT...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CAGCTGTTAGGCTGGCATCTGATTCTGCAGGTGCCGGGTATATCTGGTCACAGATCATTTGACCTGCAGTaGCAGCAAGCCCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QLLGWHLILQVPGISGHRSFDLQ*QQAPSQ
Trigger: TTGGCTTGGGGCTTGCTGCCACTGCAGGTCAAATGA...TCTGTGACCAGATATACCCGGCACCTGCAGAATCAGATGCCAGCCTAACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGGAAGGTGGTGGGGCTaGAGCACGCACTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAGRWWG*STHCIC
Trigger: GCAAATGCAGTGCGTGCTTCAGCCCCACCACCTTCC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTGTGTCCTGGCAAATaGACTTTTGTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQLCPGK*TFVLCC
Trigger: GCAACAGAGGACAAAAGTTCATTTGCCAGGACACAA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTGTTCCTCCCATAGCTaGAACTCTCGCTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMCSSHS*NSRSHS
Trigger: AGAATGGGAGCGAGAGTTTCAGCTATGGGAGGAACA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCATGGTTCTTCATGTTCTaGAATGAATTGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PADPRLASAVKLSLPPSPWFFMF*NELTFS
Trigger: GGAGAAAGTCAATTCATTTCAGAACATGAAGAACCA...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGAAGAGGTTCTGCTTGTaGCTTAGGTTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWKRFCL*LRLLLM
Trigger: CATCAGCAGCAACCTAAGTCACAAGCAGAACCTCTT...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGAGGTTCTGCTTGTaGCTTAGGTTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GNTLCWNPPADPRLASAVKRFCL*LRLLLM
Trigger: CATCAGCAGCAACCTAAGTCACAAGCAGAACCTCTT...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTTGTCTCGATATGACTaGGCTCTATCATCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFLSRYD*ALSSRG
Trigger: ACCCCGAGATGATAGAGCTCAGTCATATCGAGACAA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCTGGTGGCTCAGTaGAGGAGCTGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSARLVAQ*RSWQRH
Trigger: ATGCCTCTGCCAGCTCCTTCACTGAGCCACCAGCCT...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTTTTAGTACCAGTCTCTAGACGCATCATGTaGCGAGGTGCAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSILLAMASQSRFLLVPVSRRIM*RGAVSQ
Trigger: CTGGGAAACTGCACCTCGTCACATGATGCGTCTAGA...GACTGGTACTAAAAGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTCTAGACGCATCATGTaGCGAGGTGCAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKSRRIM*RGAVSQ
Trigger: CTGGGAAACTGCACCTCGTCACATGATGCGTCTAGA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAGACCACTTTCATCTGTaGTCTTCTCCCAATCAGTCT +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPDHFHL*SSPNQS
Trigger: AGACTGATTGGGAGAAGATCACAGATGAAAGTGGTC...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGATGCATCTGCTGCAGCTaGTGGAGCTGCGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRCICCS*WSCAKC
Trigger: GCACTTGGCGCAGCTCCAGCAGCTGCAGCAGATGCA...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGAGCACGCACTGCATTTaGTTCTGGTGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPSTHCI*FWCICC
Trigger: GCAGCAGATGCACCAGAAGCAAATGCAGTGCGTGCT...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCCTCTGGTGTATCCTTTaGTACCACAGGACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTLWCIL*YHRTLF
Trigger: AAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAG...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGCTTTCATATGTCCCTaGCATGTTTTCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSAFICP*HVFHCF
Trigger: GAAGCAGTGGAAAACATGGCAGGGACATATGAAAGC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGCTTTCATATGTCCCTaGCATGTTTTCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTAFICP*HVFHCF
Trigger: GAAGCAGTGGAAAACATGGCAGGGACATATGAAAGC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGCTTTTAGTGCCCTCTaGTGGGTGACCTTCATATCT +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWAFSAL*WVTFIS
Trigger: AGATATGAAGGTCACCCAGCAGAGGGCACTAAAAGC...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCACGATCACGTTGGCCTaGATGCTCTGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFTITLA*MLCLKS
Trigger: ACTTTTGAGACAGAGCATGCAGGCCAACGTGATCGT...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGGCCCTTTTCCTATCTaGATCCTTCTTCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWGPFPI*ILLLFQ
Trigger: CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCC...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCGGTTACATGCCAGAGTaGTCTGCATCTTTATACTCT +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLGYMPE*SASLYS
Trigger: AGAGTATAAAGATGCAGAGCACTCTGGCATGTAACC...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCTGCAGTCCACCTGGGTaGAGCAAAATCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRCSPPG*SKIWHH
Trigger: GTGGTGCCAGATTTTGCTGCACCCAGGTGGACTGCA...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAGGAAGGCCCCAGGCCTaGCATGCAGTCCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTGRPQA*HAVHLG
Trigger: ACCCAGGTGGACTGCATGGCAGGCCTGGGGCCTTCC...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCCGTCTCGTTGGTGGTaGAGCATCTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRPSRWW*SIWCLY
Trigger: GTACAAACACCAGATGCTCCACCACCAACGAGACGG...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCAGAAGAAGGAGATTCTaGAACTTGACTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSRRRRF*NLTGGR
Trigger: CCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCGGTCTGTATATGTGGTaGGGGCTGTATAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFGLYMW*GLYNLL
Trigger: CAGCAGATTATACAGCCCCCACCACATATACAGACC...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCAGGTGGCATAACAGGTaGGGGCATGCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGRWHNR*GHARWW
Trigger: CCACCACCTGGCATGCCCCCACCTGTTATGCCACCT...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGCGAGCTCTGTGAACTaGAGGCTGGTGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRASSVN*RLVELG
Trigger: CCCCAGTTCCACCAGCCTCCAGTTCACAGAGCTCGC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTTTAGTGCCCTCTGCTaGGTGACCTTCATATCTGGG +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMFSALC*VTFISG
Trigger: CCCAGATATGAAGGTCACCCAGCAGAGGGCACTAAA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCGGGGCCTTTCCACTGTaGTCCACTCTGTCGAGGACT +
Preference number: 4 (lower is better)
Translates to: CPTTKPMALFLSASFFSSGAFPL*STLSRT
Trigger: AGTCCTCGACAGAGTGGACCACAGTGGAAAGGCCCC...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGACTTCACTTTTAGGTaGCTCTTGTTGAGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASADFTFR*LLLRVA
Trigger: AGCGACTCTCAACAAGAGCCACCTAAAAGTGAAGTC...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTACCATCTCCTGGTTCTaGTCTGAATGGACCTCTATC +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLATISWF*SEWTSI
Trigger: GATAGAGGTCCATTCAGACCAGAACCAGGAGATGGT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTTCCCCACCATCTCCTaGTTCTGGTCTGAATGGACC +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPFPTIS*FWSEWT
Trigger: GGTCCATTCAGACCAGAACCAGGAGATGGTGGGGAA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCATATCTATCCAAAGGTaGAAGAGGTGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRISIQR*KRWEGR
Trigger: CCGCCCCTCCCACCTCTTCCACCTTTGGATAGATAT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CGATGGGACCACTCCCTGGAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTGTACTGGTGGTGGCTTaGACATTGGTGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: RWDHSLEILYTLGGRNQSVLVVA*TLVAYP
Trigger: TGGGTATGCCACCAATGTCCAAGCCACCACCAGTAC...ACTCTGATTCCTACCCCCTAGAGTATACAGAATCTCCAGGGAGTGGTCCCATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGCTTCCGGTCATAGGATaGCCTATCAAAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLLPVIG*PIKTPS
Trigger: AGAGGGGGTTTTGATAGGCCATCCTATGACCGGAAG...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRWSFID*SVRLPV
Trigger: GACCGGAAGTCTGACCGACCAGTCTATGAAGGACCA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCGTTCTCCTCCAAACATaGATGGTCCTTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSVLLQT*MVLHRL
Trigger: CAGTCTATGAAGGACCATCCATGTTTGGAGGAGAAC...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTCCAGGCTTAGAACTCTaGGTGCAGGTCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LAASGNPLPPHSISSSASPGLEL*VQVLQI
Trigger: AATTTGGAGGACCTGCACCCAGAGTTCTAAGCCTGG...AGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGCCAGGCTTAGAACTCTaGGTGCAGGTCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLPGLEL*VQVLQI
Trigger: AATTTGGAGGACCTGCACCCAGAGTTCTAAGCCTGG...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTCCCTTGGGCCTCTTaGACTTTCCAAGTAACTACT +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTFPWAS*TFQVTT
Trigger: AGTAGTTACTTGGAAAGTCCAAGAGGCCCAAGGGAA...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTCTTTCTGTTCCCTTaGGCCTCTTGGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQFFLFP*ASWTFQ
Trigger: TTGGAAAGTCCAAGAGGCCCAAGGGAACAGAAAGAA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552421.5
CDS-3UTR CCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGTCTGGAGCTTGGCAGTaGGGCAACCCATCATTCATG +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGSGAWQ*GNPSFM
Trigger: CATGAATGATGGGTTGCCCCACTGCCAAGCTCCAGA...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTGGGTCACGGCCAGTATaGGACAGGCAGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIGSRPV*DRQHCC
Trigger: GCAGCAGTGCTGCCTGTCCCATACTGGCCGTGACCC...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CAGCTGTTAGGCTGGCATCTGATTCTGCAGGTGCCGGGTATATCTGGTCACAGACTCAACATCTTCACTTaGGCAACAGGTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLLGWHLILQVPGISGHRLNIFT*ATGGSS
Trigger: GCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAG...TCTGTGACCAGATATACCCGGCACCTGCAGAATCAGATGCCAGCCTAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCGCCATGCAGTCCACCTaGGTGCAGCAAAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRAMQST*VQQNLA
Trigger: TGCCAGATTTTGCTGCACCCAGGTGGACTGCATGGC...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGGCTGTATAATCTGCTaGTACTGTTGTAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSGCIIC*YCCRIC
Trigger: GCAGATTCTACAACAGTATCAGCAGATTATACAGCC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTGTTCCTCCCATAGCTaGAACTCTCGCTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPCSSHS*NSRSHS
Trigger: AGAATGGGAGCGAGAGTTTCAGCTATGGGAGGAACA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAGGTGGAGGCATCTaGGAATATGGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFRGGGI*EYGTKG
Trigger: TCCTTTTGTTCCATATTCTCAGATGCCTCCACCTCT...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGACTCCCCAAGTCCTTaGTCAGATGAGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLDSPSP*SDENEL
Trigger: CAGTTCATTCTCATCTGATCAAGGACTTGGGGAGTC...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAAGAGGTCCCCTCTCCTaGCTGCCAGCCCTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKERGPLS*LPALRG
Trigger: ACCTCGGAGGGCTGGCAGTCAGGAGAGGGGACCTCT...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGAGGTCCCCTCTCCTaGCTGCCAGCCCTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWRGPLS*LPALRG
Trigger: ACCTCGGAGGGCTGGCAGTCAGGAGAGGGGACCTCT...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTGGGTACCATCTGTCTaGCAACCGTTCTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPWVPSV*QPFSFP
Trigger: TGGGAAAGAGAACGGTTGTCAGACAGATGGTACCCA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGATTTCATGCTGCCTCTaGCTGAGAACCATTACCCCT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLISCCL*LRTITP
Trigger: AGGGGTAATGGTTCTCAGTCAGAGGCAGCATGAAAT...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTCCTGTTCTACAGCTaGAGTTTGTGGCTTTATCAC +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTFLFYS*SLWLYH
Trigger: GTGATAAAGCCACAAACTTCAGCTGTAGAACAGGAA...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTTCCTGTTCTACAGCTaGAGTTTGTGGCTTTATCAC +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPFLFYS*SLWLYH
Trigger: GTGATAAAGCCACAAACTTCAGCTGTAGAACAGGAA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATTCCTGTTCTACAGCTaGAGTTTGTGGCTTTATCAC +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASAFLFYS*SLWLYH
Trigger: GTGATAAAGCCACAAACTTCAGCTGTAGAACAGGAA...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGTTGTCTCGATATGACTaGGCTCTATCATCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLLSRYD*ALSSRG
Trigger: ACCCCGAGATGATAGAGCTCAGTCATATCGAGACAA...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCGGTGCAGTTTCCCAGTaGTCAGCCATCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTGAVSQ*SAILFI
Trigger: AATAAATAAGATGGCTGATCACTGGGAAACTGCACC...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGACCACTTTCATCTGTaGTCTTCTCCCAATCAGTCT +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSDHFHL*SSPNQS
Trigger: AGACTGATTGGGAGAAGATCACAGATGAAAGTGGTC...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTATATTTGGTTCGATTaGGGGCTTTTTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTYIWFD*GLFQPG
Trigger: ACCTGGCTGAAAAAGCCCTCAATCGAACCAAATATA...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGATAGAGATAGTCTGTaGCATTGTACAGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQDRDSL*HCTVEE
Trigger: TTCCTCCACTGTACAATGTCACAGACTATCTCTATC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTCGTGGCAAATGTCTaGCTGGATGGACCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGLVANV*LDGPLV
Trigger: AACAAGAGGTCCATCCAGTCAGACATTTGCCACGAG...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTGTCCAGTTCTGGGCTaGGACTCTACCCAAATAACC +
Preference number: 4 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKCPVLG*DSTQIT
Trigger: GGTTATTTGGGTAGAGTCTCAGCCCAGAACTGGACA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCTTCTGGTGCATCTGCTaGAGCTGCTGGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSFWCIC*SCWSCA
Trigger: GGCGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAA...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACTCTCCAAAGGCTCTTaGTGGACAGTTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: GGNTLCWNPPADPRLASALSKGS*WTVVLF
Trigger: AAATAAGACAACTGTCCAGCAAGAGCCTTTGGAGAG...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTGCAAACTAAGCAAGTaGTGTCGATACCAATACTGC +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSCKLSK*CRYQYC
Trigger: GCAGTATTGGTATCGACAGCACTTGCTTAGTTTGCA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGGGTTTCTCTGGAACTTaGGAGCTCTGTGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPGFSGT*ELCELE
Trigger: CTCCAGTTCACAGAGCTCGCAAGTTCCAGAGAAACC...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCAGGAGTAGGAAGCAGTaGTGGTCTAGGTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRRSRKQ*WSRFLW
Trigger: CCAGAGAAACCTAGACCAGCACTGCTTCCTACTCCT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAGCTTTTAGTGCCCTCTaGTGGGTGACCTTCATATCT +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRAFSAL*WVTFIS
Trigger: AGATATGAAGGTCACCCAGCAGAGGGCACTAAAAGC...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCTCCCTTGGTTTTTGCTaGACTCCAAAACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSSLGFC*TPKLVK
Trigger: TTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGA...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CAGCTGTTAGGCTGGCATCTGATTCTGCAGGTGCCGGGTATATCTGGTCACAGAGTACAGTTCAACCGCTaGATTACCTCCCAGATGATC +
Preference number: 4 (lower is better)
Translates to: QLLGWHLILQVPGISGHRVQFNR*ITSQMI
Trigger: GATCATCTGGGAGGTAATGCAGCGGTTGAACTGTAC...TCTGTGACCAGATATACCCGGCACCTGCAGAATCAGATGCCAGCCTAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTAAATGGCAGCTTCTaGAGAACTCCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGLNGSF*RTPKRQ
Trigger: CTGCCTCTTGGGAGTTCTGCAGAAGCTGCCATTTAG...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGGCCCGTCTCGTTGGTaGTGGAGCATCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRGPSRW*WSIWCL
Trigger: CAAACACCAGATGCTCCACCACCAACGAGACGGGCC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAGTAGGATTGGGAAGGTaGGGACTGCGAAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGVGLGR*GLRRGR
Trigger: CCGTCCCCTTCGCAGTCCCCACCTTCCCAATCCTAC...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCAACTGCTTTAACCTaGCATCTTCTTCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLATALT*HLLLGP
Trigger: AGGACCCAGAAGAAGATGCCAGGTTAAAGCAGTTGC...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCATGGTCTGTATATGTaGTGGGGGCTGTATAATCTG +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAHGLYM*WGLYNL
Trigger: CAGATTATACAGCCCCCACCACATATACAGACCATG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGAGTAGGAAGCAGTGCTaGTCTAGGTTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLSRKQC*SRFLWN
Trigger: GTTCCAGAGAAACCTAGACCAGCACTGCTTCCTACT...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAATGGTAAGTTGTCGGTaGGGCAGAACCAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRMVSCR*GRTKRH
Trigger: GTGTCTTTTGGTTCTGCCCCACCGACAACTTACCAT...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGATGGTAAGTTGTCGGTaGGGCAGAACCAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMMVSCR*GRTKRH
Trigger: GTGTCTTTTGGTTCTGCCCCACCGACAACTTACCAT...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTAGGACCATCAAATCTTaGGCCTCTTGGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLARTIKS*ASWTFQ
Trigger: TTGGAAAGTCCAAGAGGCCCAAGATTTGATGGTCCT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCAGGACCATCAAATCTTaGGCCTCTTGGACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSRTIKS*ASWTFQ
Trigger: TTGGAAAGTCCAAGAGGCCCAAGATTTGATGGTCCT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGGGGCCTTTCCACTGTaGTCCACTCTGTCGAGGACT +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRGAFPL*STLSRT
Trigger: AGTCCTCGACAGAGTGGACCACAGTGGAAAGGCCCC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTCTGCTGGTTACTACTaGTGTCTGCTAATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQSAGYY*CLLMVL
Trigger: AAGAACCATTAGCAGACACCAGTAGTAACCAGCAGA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGATTATCTCTATTATCTaGCCGAGGCAGGCCTTTATC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQIISII*PRQAFI
Trigger: GATAAAGGCCTGCCTCGGCCAGATAATAGAGATAAT...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGGTCTGCCCCTCGCTCTTCTCCATaGTTCCATGGAGCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: TKPMALFLSASFFSSRSAPRSSP*FHGALG
Trigger: TCCTAGGGCTCCATGGAACCATGGAGAAGAGCGAGG...GGCAGACCTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCATGGTCAGCCATCTGTaGCTCAGACCCGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRMVSHL*LRPEVF
Trigger: AAAGACTTCGGGTCTGAGCCACAGATGGCTGACCAT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCTGGCTTGGACATTGGTaGCATACCCATAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KSSSQWQPSASPFNKFFCWLGHW*HTHRHW
Trigger: CCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCA...GCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRSLLYW*WLGHWW
Trigger: CCACCAATGTCCAAGCCACCACCAGTACAACAGACT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFSLLYW*WLGHWW
Trigger: CCACCAATGTCCAAGCCACCACCAGTACAACAGACT...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCCAAAACCCCCTCTTCTaGATGAGGAATGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTQNPLF*MRNGLF
Trigger: AAAAAGACCATTCCTCATCCAGAAGAGGGGGTTTTG...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGACTTCTTCTCGACTCGTaGAGCTGGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRLLLDS*SWRRLV
Trigger: CACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAG...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCTTGCCACAAGTCTaGTTATCTGCACTCATTTCA +
Preference number: 4 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSLLPQV*LSALIS
Trigger: TGAAATGAGTGCAGATAACCAGACTTGTGGCAAGAG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCTCTTGCCACAAGTCTaGTTATCTGCACTCATTTCA +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPLLPQV*LSALIS
Trigger: TGAAATGAGTGCAGATAACCAGACTTGTGGCAAGAG...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTCTCTTGCCACAAGTCTaGTTATCTGCACTCATTTCA +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPLLPQV*LSALIS
Trigger: TGAAATGAGTGCAGATAACCAGACTTGTGGCAAGAG...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCCGACCACAAAACCTATaGCCCTTTTCCTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSRPQNL*PFSYLH
Trigger: ATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCG...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACAGCTCCGCGAGGCCTTaGCTTCAGACCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADSSARP*LQTTSK
Trigger: CTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCT...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTTCTGCATTATTCCCTaGTACTGGAAACCGACTCGA +
Preference number: 4 (lower is better)
Translates to: REALASDHLKANHLRGIMFCIIP*YWKPTR
Trigger: TCGAGTCGGTTTCCAGTATCAGGGAATAATGCAGAA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCTGTTCTGAAATGAATTaGCTTTCTCCTGGAGATAGC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTCSEMN*LSPGDS
Trigger: GCTATCTCCAGGAGAAAGTCAATTCATTTCAGAACA...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGCTTCATGTTCTGAAATaGATTGACTTTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQLHVLK*IDFLLE
Trigger: CTCCAGGAGAAAGTCAATTCATTTCAGAACATGAAG...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGGGGCTGCTGTTAACTaGGGAGGTATCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRGAAVN*GGIPCG
Trigger: TCCACAAGGGATACCTCCTCAGTTAACAGCAGCCCC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTGAGATGGAGCAGCTaGAGACTCCCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRLRWSS*RLPKSL
Trigger: CAAGGACTTGGGGAGTCTTCAGCTGCTCCATCTCAG...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGATTAGGTGGCTCTTGTTaGGAGTCGCTTAGATTCTCA +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRLGGSC*ESLRFS
Trigger: TGAGAATCTAAGCGACTCTCAACAAGAGCCACCTAA...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCCGCCTATCTCCATCATaGGACCGAGATGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGRLSPS*DRDGGA
Trigger: AGCACCACCATCTCGGTCTCATGATGGAGATAGGCG...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACTCGATGATCTGCTATaGCATTACTTTGACGATCAA +
Preference number: 4 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPLDDLL*HYFDDQ
Trigger: TTGATCGTCAAAGTAATGTCATAGCAGATCATCGAG...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCCTCGATGATCTGCTATaGCATTACTTTGACGATCAA +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSLDDLL*HYFDDQ
Trigger: TTGATCGTCAAAGTAATGTCATAGCAGATCATCGAG...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCGGTGCAGTTTCCCAGTaGTCAGCCATCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSGAVSQ*SAILFI
Trigger: AATAAATAAGATGGCTGATCACTGGGAAACTGCACC...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCATGCTGTATAGCCCATaGATCTCATCGGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSMLYSP*ISSALS
Trigger: TGATAAAGCCGATGAGATTCATGGGCTATACAGCAT...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACTCTGGTGTATCCTTTaGTACCACAGGACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRLWCIL*YHRTLF
Trigger: AAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAG...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCATGGCAGAGCAGACTTaGTCAAAGGAGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSMAEQT*SKELLN
Trigger: ATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCAT...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTGTAAGATGAGCTGTTaGCTCTATTGCCTTCTAATC +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPCKMSC*LYCLLI
Trigger: GATTAGAAGGCAATAGAGGCAACAGCTCATCTTACA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATAAATCCCTTGGTTTTTaGTGCACTCCAAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYKSLGF*CTPKLV
Trigger: GACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTT...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATCATCATGTGACGAGGTaGAGTTTCCCAGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYHHVTR*SFPVIS
Trigger: GCTGATCACTGGGAAACTGCACCTCGTCACATGATG...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCA +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFCPSPI*FSECNP
Trigger: TGGGTTACATTCCGAAAAGCAAATGGGAGATGGACA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGCTTAAAGGTTACATaGCAGAGTGCTCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLGLKVT*QSALHL
Trigger: AAGATGCAGAGCACTCTGGCATGTAACCTTTAAGCC...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGAAGAGAGGAAATTCTGTaGAGAAGGCCATGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRREEIL*RRPCFP
Trigger: TGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCT...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACAGTTGGGATTTAGAATaGCCCTGGGAGGGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADSWDLE*PWEGRE
Trigger: TTCCCGCCCCTCCCAGGGCCATTCTAAATCCCAACT...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGATTCTTTTACCGGCTCTaGTGTATCCTTTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRFFYRL*CILCYH
Trigger: GTGGTAGCAAAGGATACACCAGAGCCGGTAAAAGAA...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGAGAAGAAGGAGATTCTaGAACTTGACTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPRRRRF*NLTGGR
Trigger: CCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCT...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTGGGGGCATGCCAGGTaGTGGCACTGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSWGHAR*WHCSRE
Trigger: CTCCCTGCTACAGTGCCACCACCTGGCATGCCCCCA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTAAATCTTGGGCCTCTTaGACTTTCCAAGTAACTACT +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPKSWAS*TFQVTT
Trigger: AGTAGTTACTTGGAAAGTCCAAGAGGCCCAAGATTT...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGGTCTGCCCTGCTGTCCAAAAGCTaGTTTGGGGCCTTTCCACTG +
Preference number: 4 (lower is better)
Translates to: TKPMALFLSASFFSSRSALLSKS*FGAFPL
Trigger: CAGTGGAAAGGCCCCAAACCAGCTTTTGGACAGCAG...GGCAGACCTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCTTAAAATTCTTCTGCTaGTTACTACTGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLLKFFC*LLLVSA
Trigger: AGCAGACACCAGTAGTAACCAGCAGAAGAATTTTAA...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTGGTTGTTTTCTGAATaGGGTAGACCAATACCCACA +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSWLFSE*GRPIPT
Trigger: TGTGGGTATTGGTCTACCCCATTCAGAAAACAACCA...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCATTATCTCTATTATCTaGCCGAGGCAGGCCTTTATC +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSIISII*PRQAFI
Trigger: GATAAAGGCCTGCCTCGGCCAGATAATAGAGATAAT...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCAGCTCTTCGGGGTaGTATTCTCTCTCTACTCCC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADPSSSG*YSLSTP
Trigger: GGGAGTAGAGAGAGAATACCACCCCGAAGAGCTGGG...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTACCATCTCCTGGTTCTaGTCTGAATGGACCTCTATC +
Preference number: 4 (lower is better)
Translates to: ELKIILHSAGNGLPVTFPTISWF*SEWTSI
Trigger: GATAGAGGTCCATTCAGACCAGAACCAGGAGATGGT...AGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCAAAACCCCCTCTTCTaGATGAGGAATGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWQNPLF*MRNGLF
Trigger: AAAAAGACCATTCCTCATCCAGAAGAGGGGGTTTTG...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TTTTTATCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGTGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FLSRVLYITHGFDGTTPWWSFID*SVRLPV
Trigger: GACCGGAAGTCTGACCGACCAGTCTATGAAGGACCA...CCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGCGACCACAAAACCTATaGCCCTTTTCCTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: LYSGGNTLCWNPPADPRLRPQNL*PFSYLH
Trigger: ATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCG...CAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGATTCTAATACCTCTTaGGGACACTGGAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTDSNTS*GHWRTL
Trigger: TAAAGTTCTCCAGTGTCCCCAAGAGGTATTAGAATC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGACAGCAGACCCCCGCCTaGCTTCAGCAGTTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRQQTPA*LQQLSY
Trigger: ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTG...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTGTGACATTGTACAGTaGAGGAAATACTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPCDIVQ*RKYSLL
Trigger: CAACAGAGAGTATTTCCTCCACTGTACAATGTCACA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCGAGCCTAGGTGTCACTaGCGCACATTCCTAATCAAG +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLREPRCH*RTFLIK
Trigger: CTTGATTAGGAATGTGCGCCAGTGACACCTAGGCTC...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTGTTCGCGGAAGCTCATaGAGCCCGAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFVRGSS*SPRRRG
Trigger: CCCCCTCCTCCTCGGGCTTCATGAGCTTCCGCGAAC...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTGTTCTGAAATGAATTaGCTTTCTCCTGGAGATAGC +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWCSEMN*LSPGDS
Trigger: GCTATCTCCAGGAGAAAGTCAATTCATTTCAGAACA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTGGTTCTTCATGTTCTaGAATGAATTGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EEILSVGILQQTPAWLQQWFFMF*NELTFS
Trigger: GGAGAAAGTCAATTCATTTCAGAACATGAAGAACCA...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAACTTGCGAGCTCTGTaGACTGGAGGCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSNLRAL*TGGWWN
Trigger: GTTCCACCAGCCTCCAGTTCACAGAGCTCGCAAGTT...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGTGTCCTTCACTGCAGTaGTTGGCTGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSACPSLQ*LAEMEQ
Trigger: CTGCTCCATCTCAGCCAATCACTGCAGTGAAGGACA...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGATGTCCTTCACTGCAGTaGTTGGCTGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRCPSLQ*LAEMEQ
Trigger: CTGCTCCATCTCAGCCAATCACTGCAGTGAAGGACA...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCGTGCCCTCTGCTGGGTaGCCTTCATATCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSVPSAG*PSYLGL
Trigger: AAGACCCAGATATGAAGGTCACCCAGCAGAGGGCAC...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCAGATTCTCATTTGACTaGGCCGCCTTGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRRFSFD*AALTSF
Trigger: AAAGGATGTCAAGGCGGCTCAGTCAAATGAGAATCT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTTTAGGTGGCTCTTGTTaGGAGTCGCTTAGATTCTCA +
Preference number: 4 (lower is better)
Translates to: ELKIILHSAGNGLPVTFPLGGSC*ESLRFS
Trigger: TGAGAATCTAAGCGACTCTCAACAAGAGCCACCTAA...AGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp TCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGAGGACCTCTGTAAGATaGGCTGTTGCCTCTATTGCC +
Preference number: 4 (lower is better)
Translates to: SDHKTYGPFPICILLLFQRTSVR*AVASIA
Trigger: GGCAATAGAGGCAACAGCTCATCTTACAGAGGTCCT...CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCTCCTGGTTCTGGTCTaGATGGACCTCTATCACGAC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADLLVLV*MDLYHD
Trigger: GTCGTGATAGAGGTCCATTCAGACCAGAACCAGGAG...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGGTCACAGGAACAGATaGTCTTGCTGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAGHRNR*SCWWSR
Trigger: TCTGCTCCACCAGCAAGATCATCTGTTCCTGTGACC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTTTTTCTTTGCAGGATaGAAAAGGGAAGAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFFFFAG*KREESL
Trigger: AAGGGACTCTTCCCTTTTTCATCCTGCAAAGAAAAA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAGCACCACACTGGTCGTaGCCCCTAAGTCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGAPHWS*PLSPTQ
Trigger: TTGAGTGGGACTTAGGGGTCACGACCAGTGTGGTGC...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAATGCATCTGCTGCAGCTaGTGGAGCTGCGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKECICCS*WSCAKC
Trigger: GCACTTGGCGCAGCTCCAGCAGCTGCAGCAGATGCA...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACAGCACGCACTGCATTTaGTTCTGGTGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADSTHCI*FWCICC
Trigger: GCAGCAGATGCACCAGAAGCAAATGCAGTGCGTGCT...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGTGTGCTGCTGCAGCCTaGAACTGCTTTAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSACAAAA*NCFNLA
Trigger: TGCCAGGTTAAAGCAGTTGCAGGCTGCAGCAGCACA...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCCGATGCTGCTGGTGCTaGTGCCAGTGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSRCCWC*CQCAAA
Trigger: TGCAGCAGCACACTGGCAGCAGCACCAGCAGCATCG...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATTCTCGATCATACCCATaGTCTCGATTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYSRSYP*SRFLSS
Trigger: AGAAGAAAGAAATCGAGAGCATGGGTATGATCGAGA...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTCACGTTGGCCTGCATaGTCTGTCTCAAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPSRWPA*SVSKVD
Trigger: ATCAACTTTTGAGACAGAGCATGCAGGCCAACGTGA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCCAAAACTGGTCAAAATaGCTAACTCTGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTQNWSK*LTLSLM
Trigger: CATCAATGACAGAGTTAGGCATTTTGACCAGTTTTG...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGATCCCTTGGTTTTTGCTaGACTCCAAAACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRSLGFC*TPKLVK
Trigger: TTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGA...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCCATGAATATTTCTCTTaGCACAAGTCTGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSHEYFS*HKSGYL
Trigger: CAGATAACCAGACTTGTGGCAAGAGAAATATTCATG...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTGTTACAGAATGGATATaGTCCAGGGAACTGATGAAT +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAVTEWI*SRELMN
Trigger: ATTCATCAGTTCCCTGGAGCATATCCATTCTGTAAC...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCACAAAATGCAAATTATaGTTGAGGAAGAAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSTKCKL*LRKKAL
Trigger: GAGAGCCTTCTTCCTCAAGCATAATTTGCATTTTGT...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATATGTTGGGTAGGCTGTaGCACATATCTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYMLGRL*HISAGM
Trigger: CATTCCAGCAGATATGTGGCACAGCCTACCCAACAT...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGGGGTCTCTTTGGAAATaGAGGTTCCAGATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGGSLWK*RFQIAS
Trigger: AGAAGCAATCTGGAACCTGCATTTCCAAAGAGACCC...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTGGGCTCTGGCACCAGTaGTTCCCAACCTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: DGVTNPKMLVVLRNSELFGLWHQ*FPTSRL
Trigger: AAGACGTGAGGTTGGGAAGCACTGGTGCCAGAGCCC...AAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTTGGGACAGGCAGCACTaGTGCATCTTTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCIWDRQH*CIFPHR
Trigger: CCTATGTGGAAAGATGCAGCAGTGCTGCCTGTCCCA...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCGTCTCGTTGGTGGTaGAGCATCTGGTGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADPSRWW*SIWCLY
Trigger: GTACAAACACCAGATGCTCCACCACCAACGAGACGG...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGGGGTGGCGGCTGAGGTaGGGGCATGTAAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWGWRLR*GHVRLR
Trigger: TCTCAGTCTTACATGCCCCCACCTCAGCCGCCACCC...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGACTGCTGCTGTTCCTGTaGAGTCATCGTAGAGGGATC +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRLLLFL*SHRRGI
Trigger: GATCCCTCTACGATGACTCCACAGGAACAGCAGCAG...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCATGGTCTGTATATGTaGTGGGGGCTGTATAATCTG +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPHGLYM*WGLYNL
Trigger: CAGATTATACAGCCCCCACCACATATACAGACCATG...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCAGGAGGTATCCCTTGTaGAACTCCAGGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGRRYPL*NSRGRY
Trigger: ATACCTCCCCCTGGAGTTCCACAAGGGATACCTCCT...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTTTAAAATTCTTCTGCTaGTTACTACTGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPLKFFC*LLLVSA
Trigger: AGCAGACACCAGTAGTAACCAGCAGAAGAATTTTAA...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGACCTCGACTGATTGCCTaGCCGCGACCTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGPRLIA*PRPLFT
Trigger: AGTAAACAGAGGTCGCGGCCAGGCAATCAGTCGAGG...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGACCCAGCTCTTCGGGGTaGTATTCTCTCTCTACTCCC +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGPSSSG*YSLSTP
Trigger: GGGAGTAGAGAGAGAATACCACCCCGAAGAGCTGGG...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCTTCCCCACCATCTCCTaGTTCTGGTCTGAATGGACC +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGFPTIS*FWSEWT
Trigger: GGTCCATTCAGACCAGAACCAGGAGATGGTGGGGAA...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGTGTATCTCCTCTTTCTaGATACTCTCGAATCCTCAA +
Preference number: 4 (lower is better)
Translates to: CTVEEILSVGILQQTPAWCISSF*ILSNPQ
Trigger: TTGAGGATTCGAGAGTATCCAGAAAGAGGAGATACA...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGACCCCTCCAAGGCCTTaGTCAGAGTCTAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSATPPRP*SESKLA
Trigger: TGCAAGCTTAGACTCTGACCAAGGCCTTGGAGGGGT...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGATGGAGGTGGTGGTATTaGGACAGGTGGCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRWRWWY*DRWPGH
Trigger: GTGACCAGGCCACCTGTCCCAATACCACCACCTCCA...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGAGGTGGAGGTGGTaGTATTGGGACAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRRRWRW*YWDRWP
Trigger: AGGCCACCTGTCCCAATACCACCACCTCCACCTCCT...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGTACTGGTGGTGGCTTaGACATTGGTGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAVLVVA*TLVAYP
Trigger: TGGGTATGCCACCAATGTCCAAGCCACCACCAGTAC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACGTACTGGTGGTGGCTTaGACATTGGTGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADVLVVA*TLVAYP
Trigger: TGGGTATGCCACCAATGTCCAAGCCACCACCAGTAC...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCCTTCCGGTCATAGGATaGCCTATCAAAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CPTTKPMALFLSASFFSSLPVIG*PIKTPS
Trigger: AGAGGGGGTTTTGATAGGCCATCCTATGACCGGAAG...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGCTCGACTCGTGGAGCTaGAGGAGGCTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQLDSWS*RRLVAQ
Trigger: CTGAGCCACCAGCCTCCTCCAGCTCCACGAGTCGAG...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCCCAGGCTTAGAACTCTaGGTGCAGGTCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: CPTTKPMALFLSASFFSSPGLEL*VQVLQI
Trigger: AATTTGGAGGACCTGCACCCAGAGTTCTAAGCCTGG...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCCCATTCTGCTGGCAATaGCCTCCCAGTCACGTTTCC +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSPFCWQ*PPSHVS
Trigger: GGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGG...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTGTGACATTGTACAGTaGAGGAAATACTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLACDIVQ*RKYSLL
Trigger: CAACAGAGAGTATTTCCTCCACTGTACAATGTCACA...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGAGTCACTCAACTAAATaGCAGCTTCTGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGSHSTK*QLLQNS
Trigger: GGAGTTCTGCAGAAGCTGCCATTTAGTTGAGTGACT...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 72 bp AGGTCATCATATGTGCACTTCAAGCTCCCCTTAGTGTaGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RSSYVHFKLPLV*LMEAMSSSGLR
Trigger: TCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCACATATGATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAACACTGGTGGTGGCAATaGAGGAGGCAACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEHWWWQ*RRQHWR
Trigger: CCTCCAGTGTTGCCTCCTTCATTGCCACCACCAGTG...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGCACTGGTGGTGGCAATaGAGGAGGCAACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWHWWWQ*RRQHWR
Trigger: CCTCCAGTGTTGCCTCCTTCATTGCCACCACCAGTG...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAGGGGCTGCTGTTAACTaGGGAGGTATCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRGAAVN*GGIPCG
Trigger: TCCACAAGGGATACCTCCTCAGTTAACAGCAGCCCC...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCGAAAGTCTTCTTGCTTaGCCAATCCTGGGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSESLLA*PILGLD
Trigger: GTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTC...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTATATTTGGTTCGATTaGGGGCTTTTTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPYIWFD*GLFQPG
Trigger: ACCTGGCTGAAAAAGCCCTCAATCGAACCAAATATA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp GATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCCCGTCAACCAGCTCTaGAAGCAGGAGTGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: DGVTNPKMLVVLRNSELFPVNQL*KQECKL
Trigger: GAGCTTACACTCCTGCTTTCAGAGCTGGTTGACGGG...AAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCCCTCGGGGATCCCTATaGAGGCACACTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIPRGSL*RHTGGT
Trigger: GGTGCCACCAGTGTGCCTTCATAGGGATCCCCGAGG...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp GATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAGGAGGCTCAGGACTaGATGCTGAGCTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: DGVTNPKMLVVLRNSELFQEAQD*MLSSVV
Trigger: CACAACTGAGCTCAGCATTCAGTCCTGAGCCTCCTG...AAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTGGAGCTGCGCCAAGTaGTGTTCGCGGAAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSWSCAK*CSRKLM
Trigger: CATGAGCTTCCGCGAACAGCACTTGGCGCAGCTCCA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGTGCTTCTGGTGCATCTaGTGCAGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWCFWCI*CSCWSC
Trigger: GCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCA...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCTGCATTTGCTTCTGGTaGATCTGCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSCICFW*ICCSCW
Trigger: CCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCA...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp TCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTTTTAGTACCAGTCATGGCAGAGCAGACTTaGTCAAAGGAGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSILLAMASQSRFLLVPVMAEQT*SKELLN
Trigger: ATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCAT...GACTGGTACTAAAAGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCGTGTGTCTTCCATTCTaGTTTGCCCAGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGVCLPF*FAQDLC
Trigger: ACAGAGGTCCTGGGCAAAGCAGAATGGAAGACACAC...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCGCACTTTCTCCCGACTaGTTCCAGGCCTCACCAACC +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSALSPD*FQASPT
Trigger: GGTTGGTGAGGCCTGGAAGCAGTCGGGAGAAAGTGC...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTAAAATCTCGATGATCTaGTATGACATTACTTTGACG +
Preference number: 4 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPKISMI*YDITLT
Trigger: CGTCAAAGTAATGTCATAGCAGATCATCGAGATTTT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CGATGGGACCACTCCCTGGAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTAAATCCCTTGGTTTTTaGTGCACTCCAAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: RWDHSLEILYTLGGRNQSKSLGF*CTPKLV
Trigger: GACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTT...ACTCTGATTCCTACCCCCTAGAGTATACAGAATCTCCAGGGAGTGGTCCCATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGAAATCCCTTGGTTTTTaGTGCACTCCAAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPKSLGF*CTPKLV
Trigger: GACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTT...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAATAGCAGCATCTTaGAGCAAAGAACGAATATCT +
Preference number: 4 (lower is better)
Translates to: YSGGNTLCWNPPADPRLASIAAS*SKERIS
Trigger: AGATATTCGTTCTTTGCTGCAAGATGCTGCTATTGA...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTCAATAGCAGCATCTTaGAGCAAAGAACGAATATCT +
Preference number: 4 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSSIAAS*SKERIS
Trigger: AGATATTCGTTCTTTGCTGCAAGATGCTGCTATTGA...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCCTGTTCTTCGATATTTaGATCAAAATCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTLFFDI*IKIFHL
Trigger: GAGATGGAAGATTTTGATGCAAATATCGAAGAACAG...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGATAATCCTCCATTCTaGTGGCAATGGCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRDNPPF*WQWPPS
Trigger: ACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATC...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAAAAATTAACGTCTTaGTTGGGTACAGCAAGATTC +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSEKLTS*LGTARF
Trigger: GAATCTTGCTGTACCCAAGCAAGACGTTAATTTTTC...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGGCCCGTCTCGTTGGTaGTGGAGCATCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEGPSRW*WSIWCL
Trigger: CAAACACCAGATGCTCCACCACCAACGAGACGGGCC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGGATTCCAGCTCCATTaGAACCAAACCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRGFQLH*NQTRRP
Trigger: GGGCCTCCTGGTTTGGTTCCAATGGAGCTGGAATCC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGACATGTAAGACTGAGATaGGGGCATATAGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRHVRLR*GHIGPR
Trigger: CCTGGGTCCTATATGCCCCCATCTCAGTCTTACATG...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACGGTGGAGCTAGTAGTTaGGATTTAGAATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADGGASS*DLEWPW
Trigger: CCAGGGCCATTCTAAATCCCAACTACTAGCTCCACC...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGGTGGAGCTAGTAGTTaGGATTTAGAATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAGGASS*DLEWPW
Trigger: CCAGGGCCATTCTAAATCCCAACTACTAGCTCCACC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTCCAAAGGCTCTTGCTaGACAGTTGTCTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRSKGSC*TVVLFP
Trigger: TGGAAATAAGACAACTGTCCAGCAAGAGCCTTTGGA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCAGAAGGAGGCATCCCTaGTGGGGGAACAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSRRRHP*WGNRGW
Trigger: CCAACCTCTGTTCCCCCACCAGGGATGCCTCCTTCT...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAGTCCAAAAGCTGGTTTaGGGCCTTTCCACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGVQKLV*GLSTVV
Trigger: GACCACAGTGGAAAGGCCCCAAACCAGCTTTTGGAC...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AGGGAAAGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTCATACCCATAGGCACTaGGCCAGGAGGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RERQTSLQRCDRKHFTLGHTHRH*ARRGNG
Trigger: TCCATTCCCCCTCCTGGCCCAGTGCCTATGGGTATG...ACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCTTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCTGGTGGCTTGGACATTaGTGGCATACCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSWWLGH*WHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCA...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCCAAAACCCCCTCTTCTaGATGAGGAATGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFQNPLF*MRNGLF
Trigger: AAAAAGACCATTCCTCATCCAGAAGAGGGGGTTTTG...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATACTGTTCAAAGTGGTTaGTCTGTCTCCTACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYTVQSG*SVSYQF
Trigger: GAACTGGTAGGAGACAGACCAACCACTTTGAACAGT...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp CTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTCAATTATGCATATGTTaGGTAGGCTGTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: LAASGNPLPPHSISSSASQLCIC*VGCATY
Trigger: ATATGTGGCACAGCCTACCCAACATATGCATAATTG...AGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTGGTGCCGGGTATATCTaGTCACAGATTACACTTCCC +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCGAGYI*SQITLP
Trigger: GGGAAGTGTAATCTGTGACCAGATATACCCGGCACC...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTATGAAGGCACACTGGTaGCACCTCAGAGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIMKAHW*HLRGKA
Trigger: CGCTTTACCTCTGAGGTGCCACCAGTGTGCCTTCAT...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CAGCTGTTAGGCTGGCATCTGATTCTGCAGGTGCCGGGTATATCTGGTCACAGATTGAAAATGTATCAGTaGGCCTTCCATAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: QLLGWHLILQVPGISGHRLKMYQ*AFHSKS
Trigger: TGACTTGCTATGGAAGGCCCACTGATACATTTTCAA...TCTGTGACCAGATATACCCGGCACCTGCAGAATCAGATGCCAGCCTAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCTCCCAGATGATCAAGTaGTTCAGCAACTTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRSQMIK*FSNFRE
Trigger: CTCACGAAAGTTGCTGAACCACTTGATCATCTGGGA...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGCTGAGACTCTACCCATGGCAAATGTCTGACTaGATGGACCTCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: PLVLLMEAMSSSGLRLYPWQMSD*MDLLFV
Trigger: TACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA...TGGGTAGAGTCTCAGCCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TTCTGCAGGTGCCGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTTGACTAGCAATGTCCAGTTCTaGGCTGAGACTCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: FCRCRVYLVTDYTSLFLTSNVQF*AETLPK
Trigger: TTTGGGTAGAGTCTCAGCCCAGAACTGGACATTGCT...AGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCGGCACCTGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGTGCCCTCTGCTGGGTaGCCTTCATATCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEVPSAG*PSYLGL
Trigger: AAGACCCAGATATGAAGGTCACCCAGCAGAGGGCAC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGGTCTGCCAGATTCTCATTTGACTaGGCCGCCTTGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: TKPMALFLSASFFSSRSARFSFD*AALTSF
Trigger: AAAGGATGTCAAGGCGGCTCAGTCAAATGAGAATCT...GGCAGACCTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp CAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTCTCGATGATCTGCTATaGCATTACTTTGACGATCAA +
Preference number: 4 (lower is better)
Translates to: QESSISHTGSMGPLPGDSLDDLL*HYFDDQ
Trigger: TTGATCGTCAAAGTAATGTCATAGCAGATCATCGAG...AGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR TCA 90 bp GAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTTCTCATTTTGTACATTTTAGGCTGGTGGCTCAGTaGAGGAGCTGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EILYTLGGRNQSSHFVHFRLVAQ*RSWQRH
Trigger: ATGCCTCTGCCAGCTCCTTCACTGAGCCACCAGCCT...AAAATGTACAAAATGAGAACTCTGATTCCTACCCCCTAGAGTATACAGAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR TCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGCTTTTTCAGCCAGGTaGCCACTTTCATCTGTGATC +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRAFSAR*PLSSVI
Trigger: GATCACAGATGAAAGTGGTCACCTGGCTGAAAAAGC...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGCATAGGGTGGTCATTTaGCCTGCAGTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKHRVVI*PAVAAS
Trigger: GCTTGCTGCCACTGCAGGTCAAATGACCACCCTATG...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAGAGGTAAAGCGTCAGTaGAAGGTGAGCCTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGEVKRQ*KVSLGV
Trigger: GACACCTAGGCTCACCTTTCACTGACGCTTTACCTC...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAATGTACTGGGTTCCCATaGGATCTGATGAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKCTGFP*DLMSVF
Trigger: GAAGACACTCATCAGATCTCATGGGAACCCAGTACA...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGATCAGGGGCGGCTTGCTaGTGTTCAGTACTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGSGAAC*CSVLLF
Trigger: AAACAAGAGTACTGAACAGCAGCAAGCCGCCCCTGA...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCTCAGGGGCGGCTTGCTaGTGTTCAGTACTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSSGAAC*CSVLLF
Trigger: AAACAAGAGTACTGAACAGCAGCAAGCCGCCCCTGA...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAGCTGCAGCCTGCAACTaGTTTAACCTGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGAAACN*FNLASS
Trigger: AGAAGATGCCAGGTTAAAGCAGTTGCAGGCTGCAGC...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTCGATGCTGCTGGTGCTaGTGCCAGTGTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFRCCWC*CQCAAA
Trigger: TGCAGCAGCACACTGGCAGCAGCACCAGCAGCATCG...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCGGTTTCTCTGGAACTTaGGAGCTCTGTGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSGFSGT*ELCELE
Trigger: CTCCAGTTCACAGAGCTCGCAAGTTCCAGAGAAACC...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAGGTTTCTCTGGAACTTaGGAGCTCTGTGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGGFSGT*ELCELE
Trigger: CTCCAGTTCACAGAGCTCGCAAGTTCCAGAGAAACC...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ACAAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTTCACGTTGGCCTGCATaGTCTGTCTCAAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TNLAASGNPLPPHSISSSSRWPA*SVSKVD
Trigger: ATCAACTTTTGAGACAGAGCATGCAGGCCAACGTGA...AGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTCATCATGTGACGAGGTaGAGTTTCCCAGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIHHVTR*SFPVIS
Trigger: GCTGATCACTGGGAAACTGCACCTCGTCACATGATG...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCCTGTTCTTCGATATTTaGATCAAAATCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSLFFDI*IKIFHL
Trigger: GAGATGGAAGATTTTGATGCAAATATCGAAGAACAG...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCCTTCTCTTCCAGGTCTaGCCATCTGACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSLLFQV*PSDPLL
Trigger: AAGAAGAGGGTCAGATGGGCAGACCTGGAAGAGAAG...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGGCCCTTTTCCTATCTaGATCCTTCTTCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRGPFPI*ILLLFQ
Trigger: CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCCCAAATGGAAAAATCTaGCCGGCAAGCAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRPNGKI*PASNFR
Trigger: TCTGAAATTGCTTGCCGGGCAGATTTTTCCATTTGG...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGAAGTTGCTAATAAACTaGTCCCTGACCTACATCTTG +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGKLLIN*SLTYIL
Trigger: CAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTT...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGATTTAGAATGGCCCTaGGAGGGGCGGGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEDLEWP*EGREGD
Trigger: ATCTCCTTCCCGCCCCTCCCAGGGCCATTCTAAATC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAGGAGATAGCTCTGAGTaGCTTTCATATGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGGDSSE*LSYVPA
Trigger: GGCAGGGACATATGAAAGCCACTCAGAGCTATCTCC...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTATGGGGGCATGCCAGGTaGTGGCACTGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVWGHAR*WHCSRE
Trigger: CTCCCTGCTACAGTGCCACCACCTGGCATGCCCCCA...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTGCGAGCTCTGTGAACTaGAGGCTGGTGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFASSVN*RLVELG
Trigger: CCCCAGTTCCACCAGCCTCCAGTTCACAGAGCTCGC...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGCCTCGACTGATTGCCTaGCCGCGACCTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWPRLIA*PRPLFT
Trigger: AGTAAACAGAGGTCGCGGCCAGGCAATCAGTCGAGG...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGTTGCTTGACCAATCCTaGGCCTCGACTGATTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRLLDQS*ASTDCL
Trigger: CAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAA...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGCCCTTGAAGACCACCTaGCACTTTCTCCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWPLKTT*HFLPTA
Trigger: AGCAGTCGGGAGAAAGTGCCAGGTGGTCTTCAAGGG...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCGCTCTCCCGGCCCGGTaGTTTCAAAATATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSALPAR*FQNIVH
Trigger: GTGGACGATATTTTGAAACCACCGGGCCGGGAGAGC...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTTGCCACAAGTCTaGTTATCTGCACTCATTTCA +
Preference number: 4 (lower is better)
Translates to: KSSSQWQPSASPFNKFFCLLPQV*LSALIS
Trigger: TGAAATGAGTGCAGATAACCAGACTTGTGGCAAGAG...GCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCCGACCACAAAACCTATaGCCCTTTTCCTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: CPTTKPMALFLSASFFSSRPQNL*PFSYLH
Trigger: ATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCG...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAACAGCAGACCCCCGCCTaGCTTCAGCAGTTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEQQTPA*LQQLSY
Trigger: ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTG...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AGGGAAAGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTAAATCTAGCAGCCAGTaGCAACCCTCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RERQTSLQRCDRKHFTLGKSSSQ*QPSASP
Trigger: TGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTT...ACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AGGGAAAGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTCACACACGGGTTCGATaGGACCACTCCCTGGAGATT +
Preference number: 4 (lower is better)
Translates to: RERQTSLQRCDRKHFTLGHTRVR*DHSLEI
Trigger: AATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTG...ACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCCCACATTTGAAATCTTaGAATGTAGAGGTTGACACC +
Preference number: 4 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFPHLKS*NVEVDT
Trigger: GGTGTCAACCTCTACATTCCAAGATTTCAAATGTGG...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TTCTGCAGGTGCCGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTTGACTTTCATGGTGCCAGTCTaGGTTAGGATTCTAGAACAG +
Preference number: 4 (lower is better)
Translates to: FCRCRVYLVTDYTSLFLTFMVPV*VRILEQ
Trigger: CTGTTCTAGAATCCTAACCCAGACTGGCACCATGAA...AGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCGGCACCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGAGAGCCAGGGCAGCCTaGGCCAATCTCTGTATCATC +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKRARAA*ANLCII
Trigger: GATGATACAGAGATTGGCCCAGGCTGCCCTGGCTCT...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAGCAGTGTGTTTTGCCTaGTGTGAGGCAAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTAVCFA*CEASPR
Trigger: CCTAGGACTTGCCTCACACCAGGCAAAACACACTGC...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGTTCTGCATTATTCCCTaGTACTGGAAACCGACTCGA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAFCIIP*YWKPTR
Trigger: TCGAGTCGGTTTCCAGTATCAGGGAATAATGCAGAA...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCGCTTTTTCAGCCAGGTaGCCACTTTCATCTGTGATC +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSAFSAR*PLSSVI
Trigger: GATCACAGATGAAAGTGGTCACCTGGCTGAAAAAGC...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTTGGAAATTGCCAGCTTaGCGTTACAGGAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCWKLPA*RYRSSS
Trigger: TGAAGAACTCCTGTAACGTCAAGCTGGCAATTTCCA...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACCAGTGGAATGAGGTATaGCAGTCAGAAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KMLVVLRNSELFQALNMHQWNEV*QSEAWG
Trigger: CCCCCAAGCTTCTGACTGTCATACCTCATTCCACTG...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATGGTCATCCACTGGTTaGCTGGTGAGTCAGAGTATG +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGWSSTG*LVSQSM
Trigger: CATACTCTGACTCACCAGTCAACCAGTGGATGACCA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGTGCCTCATGCACAGCTaGCAGCTGTTAGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLCLMHS*QLLGWH
Trigger: ATGCCAGCCTAACAGCTGTCAGCTGTGCATGAGGCA...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGAAATTCTTAAGCTACTaGGCTGTAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKKFLSY*AVDNPQ
Trigger: TTGGGGATTATCTACAGCTCAGTAGCTTAAGAATTT...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCCGATACCAATACTGCTaGTGTTCCTGTGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSRYQYC*CSCGVI
Trigger: GATGACTCCACAGGAACAGCAGCAGTATTGGTATCG...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCTGTCGATACCAATACTaGTGCTGTTCCTGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSCRYQY*CCSCGV
Trigger: GACTCCACAGGAACAGCAGCAGTATTGGTATCGACA...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGAGGAGTAGGAAGCAGTaGTGGTCTAGGTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRRSRKQ*WSRFLW
Trigger: CCAGAGAAACCTAGACCAGCACTGCTTCCTACTCCT...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGTGGCATGTCCTTCACTaGAGTGATTGGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRWHVLH*SDWLRW
Trigger: CCATCTCAGCCAATCACTGCAGTGAAGGACATGCCA...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGTCCCTTGGTTTTTGCTaGACTCCAAAACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SDHKTYGPFPICILLLFQSLGFC*TPKLVK
Trigger: TTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGA...CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp CGATGGGACCACTCCCTGGAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTTCAATAGCAGCATCTTaGAGCAAAGAACGAATATCT +
Preference number: 4 (lower is better)
Translates to: RWDHSLEILYTLGGRNQSSIAAS*SKERIS
Trigger: AGATATTCGTTCTTTGCTGCAAGATGCTGCTATTGA...ACTCTGATTCCTACCCCCTAGAGTATACAGAATCTCCAGGGAGTGGTCCCATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAGGAGATAGCTCTGAGTaGCTTTCATATGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRGDSSE*LSYVPA
Trigger: GGCAGGGACATATGAAAGCCACTCAGAGCTATCTCC...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp TCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGTGGTTGTTTTCTGAATaGGGTAGACCAATACCCACA +
Preference number: 4 (lower is better)
Translates to: SDHKTYGPFPICILLLFQWLFSE*GRPIPT
Trigger: TGTGGGTATTGGTCTACCCCATTCAGAAAACAACCA...CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTGGTTCTGGTCTGAATaGACCTCTATCACGACCAAA +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADWFWSE*TSITTK
Trigger: TTTGGTCGTGATAGAGGTCCATTCAGACCAGAACCA...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAAGGTCTATACGACCCTaGAGGCGGATACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKERSIRP*RRIHSR
Trigger: CCTGGAATGTATCCGCCTCCAGGGTCGTATAGACCT...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGTGGTATTGGGACAGGTaGCCTGGTCACAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWWYWDR*PGHRNR
Trigger: TCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCA...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGACTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRLLYWW*LGHWWH
Trigger: ATGCCACCAATGTCCAAGCCACCACCAGTACAACAG...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGATCCTCCAAACATGGATaGTCCTTCATAGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGSSKHG*SFIDWS
Trigger: CGACCAGTCTATGAAGGACCATCCATGTTTGGAGGA...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGTTCTCCTCCAAACATaGATGGTCCTTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRVLLQT*MVLHRL
Trigger: CAGTCTATGAAGGACCATCCATGTTTGGAGGAGAAC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTCTTCTTCTCGACTCGTaGAGCTGGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFLLLDS*SWRRLV
Trigger: CACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAG...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp ACAAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGTGCCACATATCTGCTaGAATGTAAGAATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TNLAASGNPLPPHSISSSVPHIC*NVRMPF
Trigger: AAAGGGCATTCTTACATTCCAGCAGATATGTGGCAC...AGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp GATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTGCAACCCATCATTCATaGTGCCAGTCTGGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: DGVTNPKMLVVLRNSELFATHHS*CQSGLG
Trigger: TCCTAACCCAGACTGGCACCATGAATGATGGGTTGC...AAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAACTGTGGTCATCCACTaGTTGACTGGTGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGTVVIH*LTGESE
Trigger: CTCTGACTCACCAGTCAACCAGTGGATGACCACAGT...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAAATCCCAAAATGCTGGTaGTTCTCCGCAATTCAGAAC +
Preference number: 4 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKIPKCW*FSAIQN
Trigger: GTTCTGAATTGCGGAGAACCACCAGCATTTTGGGAT...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGTTTATTACATCCAAATaGAAAAATCTGCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGFITSK*KNLPGK
Trigger: CTTGCCGGGCAGATTTTTCCATTTGGATGTAATAAA...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAGGAGGGTCTAAACCCTaGTCACTTGAAGAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGGGSKP*SLEEGQ
Trigger: TTGGCCTTCTTCAAGTGACCAGGGTTTAGACCCTCC...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCGAGCAAAATATGAGCTaGTATTCAGCCTGCTTAGAT +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLREQNMS*YSACLD
Trigger: ATCTAAGCAGGCTGAATACCAGCTCATATTTTGCTC...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 72 bp CGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTaGACTTCTCCCTTGACTGTGATCACAAAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RVYLVTDYTSLF*TSPLTVITKSG
Trigger: ACCACTCTTTGTGATCACAGTCAAGGGAGAAGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGGAGATTCTGGAACTTaGCTGGTGGCAGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEGDSGT*LVAGTV
Trigger: TACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp TCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGCTTCATGTTCTGAAATaGATTGACTTTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SDHKTYGPFPICILLLFQLHVLK*IDFLLE
Trigger: CTCCAGGAGAAAGTCAATTCATTTCAGAACATGAAG...CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR TCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGAAGGAAAAGTAGATTaGGCAGGTACAGGCTTATTC +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSREGKVD*AGTGLF
Trigger: GAATAAGCCTGTACCTGCTCAATCTACTTTTCCTTC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCAGGACCTCTGTAAGATaGGCTGTTGCCTCTATTGCC +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSRTSVR*AVASIA
Trigger: GGCAATAGAGGCAACAGCTCATCTTACAGAGGTCCT...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGTGCAATCTTGATTCCTaGGGTGGTAGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWCNLDS*GGRWSA
Trigger: GGCTGACCATCTACCACCTCAGGAATCAAGATTGCA...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAAGAGGGTCTTACAATTaGACCTGGTGGTTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRRGSYN*TWWFAH
Trigger: ATGGGCAAACCACCAGGTTCAATTGTAAGACCCTCT...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp GTACACAGAAACTTTAAACTCACACTATGTAAGCCTCTAATCAGCCTGAGCAAATCTAGACGCATCATGTaGCGAGGTGCAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VHRNFKLTLCKPLISLSKSRRIM*RGAVSQ
Trigger: CTGGGAAACTGCACCTCGTCACATGATGCGTCTAGA...TTTGCTCAGGCTGATTAGAGGCTTACATAGTGTGAGTTTAAAGTTTCTGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR TCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTAGTTACATAACTTCCTaGCCTTTTTGCCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCSYITS*PFCLSA
Trigger: GGCACTAAGGCAAAAAGGTCAGGAAGTTATGTAACT...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCACACCAACCTGTATTTaGCATCATCTATGCTACATA +
Preference number: 4 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRTPTCI*HHLCYI
Trigger: TATGTAGCATAGATGATGTCAAATACAGGTTGGTGT...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTACACCAACCTGTATTTaGCATCTAAGACACCACACA +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCTPTCI*HLRHHT
Trigger: TGTGTGGTGTCTTAGATGTCAAATACAGGTTGGTGT...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTCTCTGCTTGGGGTTTTaGAATGGTTTATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCILCLGF*NGLSGI
Trigger: TATCCCAGATAAACCATTTCAAAACCCCAAGCAGAG...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTGGCATGTCCTTCACTaGAGTGATTGGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSWHVLH*SDWLRW
Trigger: CCATCTCAGCCAATCACTGCAGTGAAGGACATGCCA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGTCCCGAAAGTCTTCTTaGTTGACCAATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWSRKSS*LTNPGP
Trigger: AGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGA...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp GAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTAAAATCTCGATGATCTaGTATGACATTACTTTGACG +
Preference number: 4 (lower is better)
Translates to: ELKIILHSAGNGLPVTFPKISMI*YDITLT
Trigger: CGTCAAAGTAATGTCATAGCAGATCATCGAGATTTT...AGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACAAATCCCTTGGTTTTTaGTGCACTCCAAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADKSLGF*CTPKLV
Trigger: GACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTT...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGAAGAGAAAAGGGCCCATaGTGTATAGCCCATGAATCT +
Preference number: 4 (lower is better)
Translates to: INVLLGYSKILIPLGDTGREKGP*CIAHES
Trigger: AGATTCATGGGCTATACAGCATGGGCCCTTTTCTCT...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTGTGCAGAAGGCCATaGTTTCCAGTAATGAACAAT +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRLCRRP*FPVMNN
Trigger: ATTGTTCATTACTGGAAAGCATGGCCTTCTGCACAG...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATAAGAAGAGACAATTATaGATATGTTGGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYKKRQL*ICWVGC
Trigger: ACAGCCTACCCAACATATGCATAATTGTCTCTTCTT...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTTTGCTTCTTGGAAATTaGCAGCTTGACGTTACAGGA +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCLLLGN*QLDVTG
Trigger: TCCTGTAACGTCAAGCTGGCAATTTCCAAGAAGCAA...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTTTCCTAATCAAGAGATaGATGTTGCCTCATGCACAG +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCFLIKR*MLPHAQ
Trigger: CTGTGCATGAGGCAACATGCATCTCTTGATTAGGAA...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCCATGTAAGACTGAGATaGGGGCATATAGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSHVRLR*GHIGPR
Trigger: CCTGGGTCCTATATGCCCCCATCTCAGTCTTACATG...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGATCCAAAGGCTCTTGCTaGACAGTTGTCTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRSKGSC*TVVLFP
Trigger: TGGAAATAAGACAACTGTCCAGCAAGAGCCTTTGGA...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGCTGCTGCTGTTCCTGTaGAGTCATCGTAGAGGGATC +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQLLLFL*SHRRGI
Trigger: GATCCCTCTACGATGACTCCACAGGAACAGCAGCAG...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCGACTTCACTTTTAGGTaGCTCTTGTTGAGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSDFTFR*LLLRVA
Trigger: AGCGACTCTCAACAAGAGCCACCTAAAAGTGAAGTC...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCTGGTTCTGGTCTGAATaGACCTCTATCACGACCAAA +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSWFWSE*TSITTK
Trigger: TTTGGTCGTGATAGAGGTCCATTCAGACCAGAACCA...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGCATATGTTCCGCCATaGGGGAATGTCTATCCACAT +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRAYVPP*GNVYPH
Trigger: ATGTGGATAGACATTCCCCCATGGCGGAACATATGC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGACCCCTCCAAGGCCTTaGTCAGAGTCTAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQTPPRP*SESKLA
Trigger: TGCAAGCTTAGACTCTGACCAAGGCCTTGGAGGGGT...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCATGGTCAGCCATCTGTaGCTCAGACCCGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSMVSHL*LRPEVF
Trigger: AAAGACTTCGGGTCTGAGCCACAGATGGCTGACCAT...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp ACTTTCATCTGTGATCTTCTCCCAATCAGTCTGTCCGACCACAAAACCTATGGCACAAGAACTGAAACGTaGAAGCAAGGTGACACACAA +
Preference number: 4 (lower is better)
Translates to: TFICDLLPISLSDHKTYGTRTET*KQGDTQ
Trigger: TTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGT...GCCATAGGTTTTGTGGTCGGACAGACTGATTGGGAGAAGATCACAGATGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CCA 90 bp ATCCACAATTCAAGTTCAAATGAAGGCAACAAGCTTGAGTTCCACAGAATACATCAGCAGACCCCCGCCTaGCTTCAGCAGTTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: IHNSSSNEGNKLEFHRIHQQTPA*LQQLSY
Trigger: ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTG...ATGTATTCTGTGGAACTCAAGCTTGTTGCCTTCATTTGAACTTGAATTGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTCAAATCCCAAAATGCTaGTGGTTCTCCGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIQIPKC*WFSAIQ
Trigger: CTGAATTGCGGAGAACCACCAGCATTTTGGGATTTG...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGTCTTCCCATCCCACTTaGACACCACACACACACACA +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKSSHPT*TPHTHT
Trigger: TGTGTGTGTGTGTGGTGTCCAAGTGGGATGGGAAGA...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGCAGGCAAATGGAGAGTaGGTACCACCCAACCATTCA +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKQANGE*VPPNHS
Trigger: TGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTG...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 72 bp TATCATCCACAAAGATTACAGCCTCAACATCTTCACTaGGGCAACAGGTGGAAGCAGCAAACTGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: YHPQRLQPQHLH*GNRWKQQTEST
Trigger: TGTTGACTCAGTTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTGGATGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTGTTCTGAAATGAATTaGCTTTCTCCTGGAGATAGC +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADCSEMN*LSPGDS
Trigger: GCTATCTCCAGGAGAAAGTCAATTCATTTCAGAACA...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp ATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGCCATGCTTTCCAGTAATGAAGACTCCCCAAGTCCTTaGTCAGATGAGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: INHKRGNSVQKAMLSSNEDSPSP*SDENEL
Trigger: CAGTTCATTCTCATCTGATCAAGGACTTGGGGAGTC...TTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACTGAGATGGAGCAGCTaGAGACTCCCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVLRWSS*RLPKSL
Trigger: CAAGGACTTGGGGAGTCTTCAGCTGCTCCATCTCAG...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTCATGCTGCCTCTGACTaGGAACCATTACCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFHAASD*EPLPLQ
Trigger: TTGGAGGGGTAATGGTTCTCAGTCAGAGGCAGCATG...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp ACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTCTGGGGTTGTCTCGATATGACTaGGCTCTATCATCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TLLKLSLNTTLEGSFGLGLSRYD*ALSSRG
Trigger: ACCCCGAGATGATAGAGCTCAGTCATATCGAGACAA...CCCCAGACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR TCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGCCACTGGTTGACTGGTaGGTCAGAGTATGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKPLVDW*VRVCLE
Trigger: TTCCAAACATACTCTGACTCACCAGTCAACCAGTGG...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp TTCTGCAGGTGCCGGGTATATCTGGTCACAGATTACACTTCCCTCTTCTTGACTTACACCATCTTAGACTaGATACCCTGTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: FCRCRVYLVTDYTSLFLTYTILD*IPCHYQ
Trigger: TTGATAATGACAGGGTATTCAGTCTAAGATGGTGTA...AGTCAAGAAGAGGGAAGTGTAATCTGTGACCAGATATACCCGGCACCTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCTGCAAACTAAGCAAGTaGTGTCGATACCAATACTGC +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSCKLSK*CRYQYC
Trigger: GCAGTATTGGTATCGACAGCACTTGCTTAGTTTGCA...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGCTGCAGCCTGCAACTaGTTTAACCTGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQAAACN*FNLASS
Trigger: AGAAGATGCCAGGTTAAAGCAGTTGCAGGCTGCAGC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGTGTGTCTTCCATTCTaGTTTGCCCAGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQVCLPF*FAQDLC
Trigger: ACAGAGGTCCTGGGCAAAGCAGAATGGAAGACACAC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGATCTCGATCATACCCATaGTCTCGATTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRSRSYP*SRFLSS
Trigger: AGAAGAAAGAAATCGAGAGCATGGGTATGATCGAGA...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATAAAATCTCGATGATCTaGTATGACATTACTTTGACG +
Preference number: 4 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYKISMI*YDITLT
Trigger: CGTCAAAGTAATGTCATAGCAGATCATCGAGATTTT...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGATAATCCTCCATTCTaGTGGCAATGGCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQDNPPF*WQWPPS
Trigger: ACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGTGTTTTACAACATGTaGTACGGAATCATTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAVFYNM*YGIIEP
Trigger: TGGCTCAATGATTCCGTAGCACATGTTGTAAAACAC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AGGGAAAGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTGCTGTGCCACATATCTaGTGGAATGTAAGAATGCCC +
Preference number: 4 (lower is better)
Translates to: RERQTSLQRCDRKHFTLGAVPHI*WNVRMP
Trigger: GGGCATTCTTACATTCCAGCAGATATGTGGCACAGC...ACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp TCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATACCTGAGCAAAATCCATTaGCTACACAGTCATTTAATT +
Preference number: 4 (lower is better)
Translates to: SSISHTGSMGPLPGDSVYLSKIH*LHSHLI
Trigger: AATTAAATGACTGTGTAGGCAATGGATTTTGCTCAG...GTATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTAGGAGGTATCCCTTGTaGAACTCCAGGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFRRYPL*NSRGRY
Trigger: ATACCTCCCCCTGGAGTTCCACAAGGGATACCTCCT...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCTCATCCATATCCTaGTCTCTCTCCCAATCATCC +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSSSSIS*SLSQSS
Trigger: GGATGATTGGGAGAGAGACCAGGATATGGATGAGGA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTGTATCTCCTCTTTCTaGATACTCTCGAATCCTCAA +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADCISSF*ILSNPQ
Trigger: TTGAGGATTCGAGAGTATCCAGAAAGAGGAGATACA...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTTGGTGGCTTGGACATTaGTGGCATACCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGWWLGH*WHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCA...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTGTACTGGTGGTGGCTTaGACATTGGTGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFVLVVA*TLVAYP
Trigger: TGGGTATGCCACCAATGTCCAAGCCACCACCAGTAC...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp GTACACAGAAACTTTAAACTCACACTATGTAAGCCTCTAATCAGCCTGAGCAAACTTCCGGTCATAGGATaGCCTATCAAAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VHRNFKLTLCKPLISLSKLPVIG*PIKTPS
Trigger: AGAGGGGGTTTTGATAGGCCATCCTATGACCGGAAG...TTTGCTCAGGCTGATTAGAGGCTTACATAGTGTGAGTTTAAAGTTTCTGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGATTCTAATACCTCTTaGGGACACTGGAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSADSNTS*GHWRTL
Trigger: TAAAGTTCTCCAGTGTCCCCAAGAGGTATTAGAATC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AATTCACCTTCTCCCAGGGCTTTCTCACTGGAGCTGTCTTATCAAGGTTTGTGTAAATGTCTGACTGGATaGACCTCTTGTTTGTACAGT +
Preference number: 4 (lower is better)
Translates to: NSPSPRAFSLELSYQGLCKCLTG*TSCLYS
Trigger: ACTGTACAAACAAGAGGTCCATCCAGTCAGACATTT...ACACAAACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGGGAGAAGGTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGATTCTGAGCACCTCGTaGCAAATGTCTGACTGGATG +
Preference number: 4 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKILSTS*QMSDWM
Trigger: CATCCAGTCAGACATTTGCCACGAGGTGCTCAGAAT...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp ATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGCCATGCTTTCCAGTAATGAATTGTGTCCTGGCAAATaGACTTTTGTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: INHKRGNSVQKAMLSSNELCPGK*TFVLCC
Trigger: GCAACAGAGGACAAAAGTTCATTTGCCAGGACACAA...TTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAATCTGCTGTAACTaGGTGTGCTTCTGCATTATT +
Preference number: 4 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSRICCN*VCFCII
Trigger: AATAATGCAGAAGCACACTCAGTTACAGCAGATTCT...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR TCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCAGAGGTGGAGGCATCTaGGAATATGGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSRGGGI*EYGTKG
Trigger: TCCTTTTGTTCCATATTCTCAGATGCCTCCACCTCT...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGATATATTTGGTTCGATTaGGGGCTTTTTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRYIWFD*GLFQPG
Trigger: ACCTGGCTGAAAAAGCCCTCAATCGAACCAAATATA...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAGATAGAGATAGTCTGTaGCATTGTACAGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRDRDSL*HCTVEE
Trigger: TTCCTCCACTGTACAATGTCACAGACTATCTCTATC...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGAACTGATGAATATTTaGACTTGGTCAGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRELMNI*TWSVFK
Trigger: CTTGAAGACTGACCAAGTTCAAATATTCATCAGTTC...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGTATGAACCCCTATACTaGGCTGGAAGCAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLYEPLY*AGSRQF
Trigger: GAACTGTCTGCTTCCAGCTCAGTATAGGGGTTCATA...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACGTCATCCAGCTTATTTaGCCAGAGTTTCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KMLVVLRNSELFQALNMHVIQLI*PEFPET
Trigger: TGTCTCTGGAAACTCTGGTCAAATAAGCTGGATGAC...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGCGATACCAATACTGCTaGTGTTCCTGTGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQRYQYC*CSCGVI
Trigger: GATGACTCCACAGGAACAGCAGCAGTATTGGTATCG...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGATGGCAGAGCAGACTTaGTCAAAGGAGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRMAEQT*SKELLN
Trigger: ATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCAT...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGACGATCACGTTGGCCTaGATGCTCTGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQTITLA*MLCLKS
Trigger: ACTTTTGAGACAGAGCATGCAGGCCAACGTGATCGT...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATGCATATGTTGGGTAGGCTGACGATCACGTTGGCCTaGATGCTCTGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IWRSCSKEETIMHMLGRLTITLA*MLCLKS
Trigger: ACTTTTGAGACAGAGCATGCAGGCCAACGTGATCGT...CAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCAAAACTGGTCAAAATaGCTAACTCTGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADQNWSK*LTLSLM
Trigger: CATCAATGACAGAGTTAGGCATTTTGACCAGTTTTG...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTCAATAGCAGCATCTTaGAGCAAAGAACGAATATCT +
Preference number: 4 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADSIAAS*SKERIS
Trigger: AGATATTCGTTCTTTGCTGCAAGATGCTGCTATTGA...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGCTGTTCTTCGATATTTaGATCAAAATCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SDHKTYGPFPICILLLFQLFFDI*IKIFHL
Trigger: GAGATGGAAGATTTTGATGCAAATATCGAAGAACAG...CTGGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR GCA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGGAAAAATTAACGTCTTaGTTGGGTACAGCAAGATTC +
Preference number: 4 (lower is better)
Translates to: NKTRTETWKQGDTQRSSAEKLTS*LGTARF
Trigger: GAATCTTGCTGTACCCAAGCAAGACGTTAATTTTTC...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTTGCCCTCACAAATCCCAAAATaGTGGTGGTTCTCCGCAATT +
Preference number: 4 (lower is better)
Translates to: SFHNSKLLINCSLTYILPSQIPK*WWFSAI
Trigger: AATTGCGGAGAACCACCAGCATTTTGGGATTTGTGA...GGGCAAGATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAAGCTGGTATTCAGCCTaGTTAGATGTTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGSWYSA*LDVCWL
Trigger: TAACCAGCAAACATCTAAGCAGGCTGAATACCAGCT...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGGTCTGTATATGTGGTaGGGGCTGTATAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQGLYMW*GLYNLL
Trigger: CAGCAGATTATACAGCCCCCACCACATATACAGACC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGTCTGCTGGTTACTACTaGTGTCTGCTAATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRSAGYY*CLLMVL
Trigger: AAGAACCATTAGCAGACACCAGTAGTAACCAGCAGA...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTCTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGLLYWW*LGHWWH
Trigger: ATGCCACCAATGTCCAAGCCACCACCAGTACAACAG...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGACAAAACCCCCTCTTCTaGATGAGGAATGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRQNPLF*MRNGLF
Trigger: AAAAAGACCATTCCTCATCCAGAAGAGGGGGTTTTG...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTCCTCCAAACATGGATaGTCCTTCATAGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQSSKHG*SFIDWS
Trigger: CGACCAGTCTATGAAGGACCATCCATGTTTGGAGGA...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTCTGTCCTCCAAACATGGATaGTCCTTCATAGACTGGTCG +
Preference number: 4 (lower is better)
Translates to: STLLKLSLNTTLEGSFGLSSKHG*SFIDWS
Trigger: CGACCAGTCTATGAAGGACCATCCATGTTTGGAGGA...CAGACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGGTTCTCCTCCAAACATaGATGGTCCTTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWVLLQT*MVLHRL
Trigger: CAGTCTATGAAGGACCATCCATGTTTGGAGGAGAAC...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAACAAGAACTGAAACGTaGAAGCAAGGTGACACACAA +
Preference number: 4 (lower is better)
Translates to: YVSGFHLVLTTREEILCRTRTET*KQGDTQ
Trigger: TTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGT...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCTGTGACATTGTACAGTaGAGGAAATACTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSCDIVQ*RKYSLL
Trigger: CAACAGAGAGTATTTCCTCCACTGTACAATGTCACA...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCCCTATGAAGGCACACTaGTGGCACCTCAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIPMKAH*WHLRGK
Trigger: TTTACCTCTGAGGTGCCACCAGTGTGCCTTCATAGG...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGATCTTGCCCTTCCCTTaGCCCTTTATCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLILPFP*PFIQVE
Trigger: TTCCACTTGGATAAAGGGCCAAGGGAAGGGCAAGAT...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
3UTR CAA 72 bp CTGAAAAGTCAACGTAACTCTATAGGTCGCATATTCTaGAATGACAGGGAAAGGCAAACATCTCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LKSQRNSIGRIF*NDRERQTSLQR
Trigger: CCTCTGTAGAGATGTTTGCCTTTCCCTGTCATTCAAGAATATGCGACCTATAGAGTTACGTTGACTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR TCA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGGGTGCAGTTTCCCAGTaGTCAGCCATCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWGAVSQ*SAILFI
Trigger: AATAAATAAGATGGCTGATCACTGGGAAACTGCACC...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGCTTTCATATGTCCCTaGCATGTTTTCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQAFICP*HVFHCF
Trigger: GAAGCAGTGGAAAACATGGCAGGGACATATGAAAGC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCCATGAATATTTCTCTTaGCACAAGTCTGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSHEYFS*HKSGYL
Trigger: CAGATAACCAGACTTGTGGCAAGAGAAATATTCATG...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp ATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGCCATGCTTTCCAGTAATGAATGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCA +
Preference number: 4 (lower is better)
Translates to: INHKRGNSVQKAMLSSNECPSPI*FSECNP
Trigger: TGGGTTACATTCCGAAAAGCAAATGGGAGATGGACA...TTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTAGATAATCCTCCATTCTaGTGGCAATGGCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVDNPPF*WQWPPS
Trigger: ACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATC...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACTTCCGGTCATAGGATaGCCTATCAAAACCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVLPVIG*PIKTPS
Trigger: AGAGGGGGTTTTGATAGGCCATCCTATGACCGGAAG...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCCCAGGGCTTTCTCACTaGAGCTGTCTTATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIPGLSH*SCLIKV
Trigger: AACCTTGATAAGACAGCTCCAGTGAGAAAGCCCTGG...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAGAGTCAGAGTATGTTTaGAAAGCTAAGACTACCTGT +
Preference number: 4 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTESEYV*KAKTTC
Trigger: ACAGGTAGTCTTAGCTTTCCAAACATACTCTGACTC...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGGGTAAGACCATGTACTaGGTTCCCATGAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLGKTMY*VPMRSD
Trigger: ATCAGATCTCATGGGAACCCAGTACATGGTCTTACC...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTCATATTCAGTTGGTTaGTTGATCCCTGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: KMLVVLRNSELFQALNMHSYSVG*LIPEAT
Trigger: GGTTGCTTCAGGGATCAACCAACCAACTGAATATGA...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTTTGAAATGGTTTATCTaGGATAGAATTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCILKWFI*DRIAIS
Trigger: AGAGATGGCAATTCTATCCCAGATAAACCATTTCAA...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTAAGAGGGTCTTACAATTaGACCTGGTGGTTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVRGSYN*TWWFAH
Trigger: ATGGGCAAACCACCAGGTTCAATTGTAAGACCCTCT...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGATAGAGATAGTCTGTaGCATTGTACAGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQDRDSL*HCTVEE
Trigger: TTCCTCCACTGTACAATGTCACAGACTATCTCTATC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAGAAGGTTTATTTTCCTaGTGTTCAGGTAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGEGLFS*CSGKVT
Trigger: AGTGACTTTACCTGAACATCAGGAAAATAAACCTTC...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGCTCTCCAAAGGCTCTTaGTGGACAGTTGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQLSKGS*WTVVLF
Trigger: AAATAAGACAACTGTCCAGCAAGAGCCTTTGGAGAG...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR GCA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTGTAAGATGAGCTGTTaGCTCTATTGCCTTCTAATC +
Preference number: 4 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSCKMSC*LYCLLI
Trigger: GATTAGAAGGCAATAGAGGCAACAGCTCATCTTACA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR GCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTTCACGTTGGCCTGCATaGTCTGTCTCAAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFSRWPA*SVSKVD
Trigger: ATCAACTTTTGAGACAGAGCATGCAGGCCAACGTGA...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp ATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATGCATATGTTGGGTAGGCTGTCCCTTGGTTTTTGCTaGACTCCAAAACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: IWRSCSKEETIMHMLGRLSLGFC*TPKLVK
Trigger: TTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGA...CAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATCAATAGCAGCATCTTaGAGCAAAGAACGAATATCT +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGSIAAS*SKERIS
Trigger: AGATATTCGTTCTTTGCTGCAAGATGCTGCTATTGA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR GCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTCATGCCAGAGTGCTCTaGATCTTTATACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFHARVL*IFILFP
Trigger: GGGAAAGAGTATAAAGATGCAGAGCACTCTGGCATG...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATTCAAGCTCTCAATATaGACTACAACAAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGFKLSI*TTTREM
Trigger: CATTTCCCTTGTTGTAGTGCATATTGAGAGCTTGAA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTAGCATATGTTCCGCCATaGGGGAATGTCTATCCACAT +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVAYVPP*GNVYPH
Trigger: ATGTGGATAGACATTCCCCCATGGCGGAACATATGC...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CCA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTGTTCTCCTCCAAACATaGATGGTCCTTCATAGACTG +
Preference number: 4 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGVLLQT*MVLHRL
Trigger: CAGTCTATGAAGGACCATCCATGTTTGGAGGAGAAC...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGACAAGAACTGAAACGTaGAAGCAAGGTGACACACAA +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQTRTET*KQGDTQ
Trigger: TTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGT...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CCA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGTCTTGTGGGTCTCTTTaGAAATGCAGGTTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLSCGSL*KCRFQI
Trigger: AATCTGGAACCTGCATTTCCAAAGAGACCCACAAGA...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CCATGCTGTATAGCCCATGAATCTCATCGGCTTTATCATGAAAGTTTATTGTTTGGCTGTATAATCTGCTaGTACTGTTGTAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: PCCIAHESHRLYHESLLFGCIIC*YCCRIC
Trigger: GCAGATTCTACAACAGTATCAGCAGATTATACAGCC...AAACAATAAACTTTCATGATAAAGCCGATGAGATTCATGGGCTATACAGCATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGCTTCATGTTCTGAAATaGATTGACTTTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQLHVLK*IDFLLE
Trigger: CTCCAGGAGAAAGTCAATTCATTTCAGAACATGAAG...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR TCA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTGGTGCAGTTTCCCAGTaGTCAGCCATCTTATTTATT +
Preference number: 4 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGGAVSQ*SAILFI
Trigger: AATAAATAAGATGGCTGATCACTGGGAAACTGCACC...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGAAAATCTCGATGATCTaGTATGACATTACTTTGACG +
Preference number: 4 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRKISMI*YDITLT
Trigger: CGTCAAAGTAATGTCATAGCAGATCATCGAGATTTT...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAACAAAACTGGTCAAAATaGCTAACTCTGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEQNWSK*LTLSLM
Trigger: CATCAATGACAGAGTTAGGCATTTTGACCAGTTTTG...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAACATGAATATTTCTCTTaGCACAAGTCTGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: AVETKQELKRGSKVTHKEHEYFS*HKSGYL
Trigger: CAGATAACCAGACTTGTGGCAAGAGAAATATTCATG...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR GCA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGACTGTTCTTCGATATTTaGATCAAAATCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGLFFDI*IKIFHL
Trigger: GAGATGGAAGATTTTGATGCAAATATCGAAGAACAG...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CCA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCAATCAAACTAATTGTTaGGACCAGACCTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: FNSFHNSKLLINCSLTYINQTNC*DQTSPV
Trigger: AACAGGGGAGGTCTGGTCCCAACAATTAGTTTGATT...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp AAAAACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTAGAAGGAAAAGTAGATTaGGCAGGTACAGGCTTATTC +
Preference number: 4 (lower is better)
Translates to: KNRNSHKAMMIEIVCDIVEGKVD*AGTGLF
Trigger: GAATAAGCCTGTACCTGCTCAATCTACTTTTCCTTC...TACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR TCA 90 bp ATCCACAATTCAAGTTCAAATGAAGGCAACAAGCTTGAGTTCCACAGAATACATCTCGATGATCTGCTATaGCATTACTTTGACGATCAA +
Preference number: 4 (lower is better)
Translates to: IHNSSSNEGNKLEFHRIHLDDLL*HYFDDQ
Trigger: TTGATCGTCAAAGTAATGTCATAGCAGATCATCGAG...ATGTATTCTGTGGAACTCAAGCTTGTTGCCTTCATTTGAACTTGAATTGTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR TCA 90 bp ATCCACAATTCAAGTTCAAATGAAGGCAACAAGCTTGAGTTCCACAGAATACATAATCTGGCAAGAACTTaGAAACCTGACAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: IHNSSSNEGNKLEFHRIHNLART*KPDRLK
Trigger: TTTAAGCCTGTCAGGTTTTCAAGTTCTTGCCAGATT...ATGTATTCTGTGGAACTCAAGCTTGTTGCCTTCATTTGAACTTGAATTGTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR GCA 90 bp ATTTGGAGATCTTGTAGCAAAGAAGAGACAATTATGCATATGTTGGGTAGGCTGCATGAATATTTCTCTTaGCACAAGTCTGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: IWRSCSKEETIMHMLGRLHEYFS*HKSGYL
Trigger: CAGATAACCAGACTTGTGGCAAGAGAAATATTCATG...CAGCCTACCCAACATATGCATAATTGTCTCTTCTTTGCTACAAGATCTCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp CTGAAAAGTCAACGTAACTCTATAGGTCGCATATTCTTGAATGACAGGGAAAGGCTGTTCTTCGATATTTaGATCAAAATCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LKSQRNSIGRIFLNDRERLFFDI*IKIFHL
Trigger: GAGATGGAAGATTTTGATGCAAATATCGAAGAACAG...CCTTTCCCTGTCATTCAAGAATATGCGACCTATAGAGTTACGTTGACTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
3UTR CAA 72 bp ATGGATATGCTCCAGGGAACTGATGAATATTTGAACTaGGTCAGTCTTCAAGACACAAAGATAGAGAAATCA +
Preference number: 4 (lower is better)
Translates to: MDMLQGTDEYLN*VSLQDTKIEKS
Trigger: TGATTTCTCTATCTTTGTGTCTTGAAGACTGACCAAGTTCAAATATTCATCAGTTCCCTGGAGCATATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
3UTR CAA 72 bp TTCAAGCTTTTCTTTCCCTCATATTCAGTTGGTTGGTaGATCCCTGAAGCAACCTCTGATTTTGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: FKLFFPSYSVGW*IPEATSDFDFN
Trigger: ATTGAAATCAAAATCAGAGGTTGCTTCAGGGATCAACCAACCAACTGAATATGAGGGAAAGAAAAGCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR TCA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTATCTCTACAGAGGTGTaGTCGAAAGCATTTTACATT +
Preference number: 4 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGISTEV*SKAFYI
Trigger: AATGTAAAATGCTTTCGATCACACCTCTGTAGAGAT...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR GCA 90 bp GAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTTCTCATTTTGTACATTTTCAAAACTGGTCAAAATaGCTAACTCTGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: EILYTLGGRNQSSHFVHFQNWSK*LTLSLM
Trigger: CATCAATGACAGAGTTAGGCATTTTGACCAGTTTTG...AAAATGTACAAAATGAGAACTCTGATTCCTACCCCCTAGAGTATACAGAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CCA 90 bp GAGATTCTGTATACTCTAGGGGGTAGGAATCAGAGTTCTCATTTTGTACATTTTAGGGTTCTTTTGGTCTaGGGAAAAATAAAGAGTATC +
Preference number: 4 (lower is better)
Translates to: EILYTLGGRNQSSHFVHFRVLLV*GKIKSI
Trigger: GATACTCTTTATTTTTCCCCAGACCAAAAGAACCCT...AAAATGTACAAAATGAGAACTCTGATTCCTACCCCCTAGAGTATACAGAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS CCA 90 bp CCCCAATTCGGGTACATATCGAAAAAGAAGGCGCAGGGCTCGTCCTaGCGCCGTTACTCGTCGCAACCGACCTCCAGGAGCCGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PQFGYISKKKAQGSS*RRYSSQPTSRSRGG
Trigger: GCCGCCGCGGCTCCTGGAGGTCGGTTGCGACGAGTAACGGCGCCAGGACGAGCCCTGCGCCTTCTTTTTCGATATGTACCCGAATTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCCTCCCCAGGGCGCCAGGTAGGATaGGGAAGGTGGGGACTGCGA +
Preference number: 5 (lower is better)
Translates to: PADPRLASAVKLSLPPSPGRQVG*GRWGLR
Trigger: TCGCAGTCCCCACCTTCCCAATCCTACCTGGCGCCC...TGGGGAGGGAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 90 bp TCGGCTGCCAGCTGCACCCCTGTCCTGGCTCCCTTGAAGACCACCTaGCACTTTCTCCCGACTGCTTCCAGGCCTCACCAACCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SAASCTPVLAPLKTT*HFLPTASRPHQPSV
Trigger: GACAGAGGGTTGGTGAGGCCTGGAAGCAGTCGGGAGAAAGTGCCAGGTGGTCTTCAAGGGAGCCAGGACAGGGGTGCAGCTGGCAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp AGGCCCTCGAGGTGGTCCTCTCTCCCTGCTCCCAGCTCTTCGGGGTaGTATTCTCTCTCTACTCCCAGCCCTTCGAAGAGGTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: RPSRWSSLPAPSSSG*YSLSTPSPSKRSPL
Trigger: GAGAGGGGACCTCTTCGAAGGGCTGGGAGTAGAGAGAGAATACCACCCCGAAGAGCTGGGAGCAGGGAGAGAGGACCACCTCGAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS GCA 90 bp ACGCACTGCATTTGCTTCTGGTGCATCTGCTGCAGCTGCTGGAGCTaGGCCAAGTGCTGTTCGCGGAAGCTCATGAAGCCCGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: THCICFWCICCSCWS*AKCCSRKLMKPEEE
Trigger: CTCCTCCTCGGGCTTCATGAGCTTCCGCGAACAGCACTTGGCGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCAGTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS TCA 90 bp AGGCTTCTTCTCGACTCGTGGAGCTGGAGGAGGCTGGTGGCTCAGTaGAGGAGCTGGCAGAGGCATTCGCTCCTCAGGATAAGTCCTTCG +
Preference number: 5 (lower is better)
Translates to: RLLLDSWSWRRLVAQ*RSWQRHSLLRISPS
Trigger: CGAAGGACTTATCCTGAGGAGCGAATGCCTCTGCCAGCTCCTTCACTGAGCCACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAGCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS GCA 90 bp CGATGCTGCTGGTGCTGCTGCCAGTGTGCTGCTGCAGCCTGCAACTaGTTTAACCTGGCATCTTCTTCTGGGTCCTCAGACTGGGGTTCC +
Preference number: 5 (lower is better)
Translates to: RCCWCCCQCAAAACN*FNLASSSGSSDWGS
Trigger: GGAACCCCAGTCTGAGGACCCAGAAGAAGATGCCAGGTTAAAGCAGTTGCAGGCTGCAGCAGCACACTGGCAGCAGCACCAGCAGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 90 bp CCGACTCGATGCTGCTGGTGCTGCTGCCAGTGTGCTGCTGCAGCCTaGAACTGCTTTAACCTGGCATCTTCTTCTGGGTCCTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: PTRCCWCCCQCAAAA*NCFNLASSSGSSDW
Trigger: CCAGTCTGAGGACCCAGAAGAAGATGCCAGGTTAAAGCAGTTGCAGGCTGCAGCAGCACACTGGCAGCAGCACCAGCAGCATCGAGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTGGAGGTGGTGGTATaGGGACAGGTGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GGNTLCWNPPADPRLASAVEVVV*GQVAWS
Trigger: TGACCAGGCCACCTGTCCCAATACCACCACCTCCAC...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCGTGGAGGTGGTGGTATaGGGACAGGTGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTVEVVV*GQVAWS
Trigger: TGACCAGGCCACCTGTCCCAATACCACCACCTCCAC...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCATGGCTCAGGGGCGGCTaGCTGCTGTTCAGTACTCTT +
Preference number: 5 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPWLRGG*LLFSTL
Trigger: AAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCCA...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp TGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCGTGGCACTTCCTCATTaGGAGGTGGCAATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: WKQGDTQRSSARPWLQTTVALPH*EVAMGA
Trigger: AGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCAC...GGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCTGAGGAGGTATCCCTaGTGGAACTCCAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: YSGGNTLCWNPPADPRLALRRYP*WNSRGR
Trigger: CCTCCCCCTGGAGTTCCACAAGGGATACCTCCTCAG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTCTGAGGAGGTATCCCTaGTGGAACTCCAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GNTLCWNPPADPRLASAVLRRYP*WNSRGR
Trigger: CCTCCCCCTGGAGTTCCACAAGGGATACCTCCTCAG...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGGTGGAGGTGGTGGTATaGGGACAGGTGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: CTVEEILSVGILQQTPAWVEVVV*GQVAWS
Trigger: TGACCAGGCCACCTGTCCCAATACCACCACCTCCAC...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAAAGCTCCGCGAGGCCTaGGCTTCAGACCACCTCAAA +
Preference number: 5 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPKLREA*ASDHLK
Trigger: TTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTT...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 90 bp CTCAGGTGGGAGAGGAGGTGGCACTTCCTCATTTGGAGGTGGCAATaGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTTGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LRWERRWHFLIWRWQ*GLLRRRRFWNLTGG
Trigger: GCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCACCTCCTCTCCCACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCAGGAGGCCCGTCTCGTaGGTGGTGGAGCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRRRPVS*VVEHLV
Trigger: CACCAGATGCTCCACCACCAACGAGACGGGCCTCCT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTACGGAGGATGGTAAGTaGTCGGTGGGGCAGAACCAA +
Preference number: 5 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPTEDGK*SVGQNQ
Trigger: TTGGTTCTGCCCCACCGACAACTTACCATCCTCCGT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCTCAAAACGAGGCCCTTaGGGTCTCGGTCCTTCACAC +
Preference number: 5 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSSKRGP*GLGPSH
Trigger: GTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGA...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGATTGAACCTGGTGGTTaGCCCATAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EEILSVGILQQTPAWLQQIEPGG*PIGGGG
Trigger: ACCTCCCCCTCCTATGGGCAAACCACCAGGTTCAAT...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCCAGGAACAGATGATCTaGCTGGTGGAGCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTQEQMI*LVEQRV
Trigger: GACCCTCTGCTCCACCAGCAAGATCATCTGTTCCTG...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCTGTACTGGTGGTGGCTaGGACATTGGTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTCTGGG*DIGGIP
Trigger: GGGTATGCCACCAATGTCCAAGCCACCACCAGTACA...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGAGGAGGTATCCCTaGTGGAACTCCAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRLRRYP*WNSRGR
Trigger: CCTCCCCCTGGAGTTCCACAAGGGATACCTCCTCAG...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTATCCCGAAAGTCTTCTaGCTTGACCAATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPIPKVF*LDQSWA
Trigger: GGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGAT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCTCCAGAGGGTCTTACAATaGAACCTGGTGGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: GILQQTPAWLQQLSYHSLQRVLQ*NLVVCP
Trigger: TGGGCAAACCACCAGGTTCAATTGTAAGACCCTCTG...GAGGGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTGTACTGGTGGTGGCTaGGACATTGGTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSCTGGG*DIGGIP
Trigger: GGGTATGCCACCAATGTCCAAGCCACCACCAGTACA...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 90 bp CTGGAAGCAGGCCACCTGATCTCACTGGCATGTCCTTCACTGCAGTaGTTGGCTGAGATGGAGCAGCTGAAGACTCCCCAAGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: LEAGHLISLACPSLQ*LAEMEQLKTPQVLD
Trigger: ATCAAGGACTTGGGGAGTCTTCAGCTGCTCCATCTCAGCCAATCACTGCAGTGAAGGACATGCCAGTGAGATCAGGTGGCCTGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 90 bp ATCTCCTGGTTCTGGTCTGAATGGACCTCTATCACGACCAAAATCTaGTCTTCCCAGTCCCCTTTCTCGACTGCCAGGCCCTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ISWFWSEWTSITTKI*SSQSPFSTARPSRW
Trigger: CCACCTCGAGGGCCTGGCAGTCGAGAAAGGGGACTGGGAAGATCAGATTTTGGTCGTGATAGAGGTCCATTCAGACCAGAACCAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS TCA 90 bp TCTGCTCTCCCGGCCCGGTGGTTTCAAAATATCGTCCACATTCTTTaGTTCAGGCTTCTTCTCGACTCGTGGAGCTGGAGGAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SALPARWFQNIVHIL*FRLLLDSWSWRRLV
Trigger: CACCAGCCTCCTCCAGCTCCACGAGTCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATATTTTGAAACCACCGGGCCGGGAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTGCTGTTCAGTACTCTaGTTTTTGGCCCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSCCSVL*FLAPLS
Trigger: GGAGAGTGGGGCCAAAAACAAGAGTACTGAACAGCA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTGGCTCAGGGGCGGCTaGCTGCTGTTCAGTACTCTT +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRWLRGG*LLFSTL
Trigger: AAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCCA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGCTCTGGTGTATCCTTaGCTACCACAGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: EEILSVGILQQTPAWLQQALVYP*LPQDPF
Trigger: AAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTAGGAGATTCTGGAACTaGACTGGTGGCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPRRFWN*TGGRYC
Trigger: ACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCT...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGACGGAGGATGGTAAGTaGTCGGTGGGGCAGAACCAA +
Preference number: 5 (lower is better)
Translates to: REALASDHLKANHLRGIMTEDGK*SVGQNQ
Trigger: TTGGTTCTGCCCCACCGACAACTTACCATCCTCCGT...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCGAGGACCATCAAATCTaGGGCCTCTTGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTEDHQI*GLLDFP
Trigger: TGGAAAGTCCAAGAGGCCCAAGATTTGATGGTCCTC...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTTGTCCAAAAGCTGGTTaGGGGCCTTTCCACTGTGGT +
Preference number: 5 (lower is better)
Translates to: GNTLCWNPPADPRLASAVCPKAG*GPFHCG
Trigger: ACCACAGTGGAAAGGCCCCAAACCAGCTTTTGGACA...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGATCCCGAAAGTCTTCTaGCTTGACCAATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CTVEEILSVGILQQTPAWIPKVF*LDQSWA
Trigger: GGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGAT...CCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTGGTCAGAGTCTAAGCTaGCATCGGACCCCATCATTT +
Preference number: 5 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPGQSLS*HRTPSF
Trigger: AAATGATGGGGTCCGATGCAAGCTTAGACTCTGACC...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCATCATAACGATCACGTaGGCCTGCATGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTIITIT*ACMLCL
Trigger: GAGACAGAGCATGCAGGCCAACGTGATCGTTATGAT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 90 bp TGGGTCTTGGCCCATCGGGGCGATTTCCTTCAAAACGAGGCCCTTTaGGTCTCGGTCCTTCACACCTTGACCCTAAATCCTCAAATCTTC +
Preference number: 5 (lower is better)
Translates to: WVLAHRGDFLQNEAL*VSVLHTLTLNPQIF
Trigger: GAAGATTTGAGGATTTAGGGTCAAGGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGAAGGAAATCGCCCCGATGGGCCAAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp CGAAAGTCTTCTTGCTTGACCAATCCTGGGCCTCGACTGATTGCCTaGCCGCGACCTCTGTTTACTAGACCTTTATCCCGTGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RKSSCLTNPGPRLIA*PRPLFTRPLSRVSS
Trigger: GGAAGACACACGGGATAAAGGTCTAGTAAACAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp TATATCTCGGCCATGGCCATAATCAACAGTCTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCATACCCATAGGCACTGGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: YISAMAIINSLLYWW*LGHWWHTHRHWARR
Trigger: CCTCCTGGCCCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGCCGAGATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS CCA 90 bp GGATATATCTCGGCCATGGCCATAATCAACAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGGCATACCCATAGGCACTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GYISAMAIINSLLYW*WLGHWWHTHRHWAR
Trigger: CCTGGCCCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGCCGAGATATATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCATGGCTCAAATAGGATaGCGAGGAAGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSMAQIG*RGRGGG
Trigger: TCCTCCTCCTCTTCCTCGCAATCCTATTTGAGCCAT...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCTGCTGTTCAGTACTCTaGTTTTTGGCCCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: LKRGSKVTHKEAPRGLGFCCSVL*FLAPLS
Trigger: GGAGAGTGGGGCCAAAAACAAGAGTACTGAACAGCA...GAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCGCTCTGGTGTATCCTTaGCTACCACAGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSALVYP*LPQDPF
Trigger: AAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGC...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCGAGGACCATCAAATCTaGGGCCTCTTGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSEDHQI*GLLDFP
Trigger: TGGAAAGTCCAAGAGGCCCAAGATTTGATGGTCCTC...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTCAGAGGGTCTTACAATaGAACCTGGTGGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAQRVLQ*NLVVCP
Trigger: TGGGCAAACCACCAGGTTCAATTGTAAGACCCTCTG...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTTGTACTGGTGGTGGCTaGGACATTGGTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: QESSISHTGSMGPLPGDSCTGGG*DIGGIP
Trigger: GGGTATGCCACCAATGTCCAAGCCACCACCAGTACA...AGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATATCATAACGATCACGTaGGCCTGCATGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYIITIT*ACMLCL
Trigger: GAGACAGAGCATGCAGGCCAACGTGATCGTTATGAT...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTATCATAACGATCACGTaGGCCTGCATGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAIITIT*ACMLCL
Trigger: GAGACAGAGCATGCAGGCCAACGTGATCGTTATGAT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCATGCCTAACTCTGTCATaGATGGCATCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPCLTLS*MASRMM
Trigger: CATCATCCTGGATGCCATCAATGACAGAGTTAGGCA...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTTGCCTAACTCTGTCATaGATGGCATCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPCLTLS*MASRMM
Trigger: CATCATCCTGGATGCCATCAATGACAGAGTTAGGCA...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: YSGGNTLCWNPPADPRLARKYSL*ESSSRP
Trigger: GGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 90 bp GGAGGTGGCAATGGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTTaGCTGGTGGCAGGTACTGTAACTTCTTCTTTTACCGGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GGGNGGSSEEGDSGT*LVAGTVTSSFTGSG
Trigger: ACCAGAGCCGGTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 90 bp CGACTATCTTCTCTTCTACCCATCATCTTATCCCGAAAGTCTTCTTaGTTGACCAATCCTGGGCCTCGACTGATTGCCTGGCCGCGACCT +
Preference number: 5 (lower is better)
Translates to: RLSSLLPIILSRKSS*LTNPGPRLIAWPRP
Trigger: AGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAGAGAAGATAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp ATACCAATACTGCTGCTGTTCCTGTGGAGTCATCGTAGAGGGATCTaGCTCAGGGGCGGCTTGCTGCTGTTCAGTACTCTTGTTTTTGGC +
Preference number: 5 (lower is better)
Translates to: IPILLLFLWSHRRGI*LRGGLLLFSTLVFG
Trigger: GCCAAAAACAAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCCAGATCCCTCTACGATGACTCCACAGGAACAGCAGCAGTATTGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 90 bp AGTGGATATATCTCGGCCATGGCCATAATCAACAGTCTGTTGTACTaGTGGTGGCTTGGACATTGGTGGCATACCCATAGGCACTGGGCC +
Preference number: 5 (lower is better)
Translates to: SGYISAMAIINSLLY*WWLGHWWHTHRHWA
Trigger: GGCCCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGCCGAGATATATCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGGAGGCCCGTCTCGTaGGTGGTGGAGCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSRRPVS*VVEHLV
Trigger: CACCAGATGCTCCACCACCAACGAGACGGGCCTCCT...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGAGGGCGCCAGGTAGGATaGGGAAGGTGGGGACTGCGA +
Preference number: 5 (lower is better)
Translates to: YVSGFHLVLTTREEILCRGRQVG*GRWGLR
Trigger: TCGCAGTCCCCACCTTCCCAATCCTACCTGGCGCCC...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACTCTCGCTCCCATTCTaGGTAAAGATGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPLSLPF*VKMLKL
Trigger: CAGTTTCAACATCTTTACCAAGAATGGGAGCGAGAG...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCCAAAAGGAGGTGGCATaGACATGTTCCCCATATACT +
Preference number: 5 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSQKEVA*TCSPYT
Trigger: AGTATATGGGGAACATGTCAATGCCACCTCCTTTTG...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTATGGCAGAGCAGACTaGCTCAAAGGAGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTYGRAD*LKGAFE
Trigger: TTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATA...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCATATGGCAGAGCAGACTaGCTCAAAGGAGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: GGNTLCWNPPADPRLASAYGRAD*LKGAFE
Trigger: TTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATA...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCCAAATCTTGGGCCTCTaGGACTTTCCAAGTAACTAC +
Preference number: 5 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTQILGL*DFPSNY
Trigger: GTAGTTACTTGGAAAGTCCAAGAGGCCCAAGATTTG...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGGGAATCATTCCCCACTaGCTTTTAGTGCCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: REALASDHLKANHLRGIMGIIPH*LLVPSA
Trigger: AGCAGAGGGCACTAAAAGCAAGTGGGGAATGATTCC...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATAGGCTGAGTAACAGCTaGGGCTTTGTCGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYRLSNS*GFVDLS
Trigger: ACTCAAATCGACAAAGCCCAAGCTGTTACTCAGCCT...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCGAAAGTCTTCTTGCTaGACCAATCCTGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRRKSSC*TNPGPR
Trigger: TCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCG...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp CTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTATCATAACGATCACGTaGGCCTGCATGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LAASGNPLPPHSISSSASIITIT*ACMLCL
Trigger: GAGACAGAGCATGCAGGCCAACGTGATCGTTATGAT...AGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGCATCTTGCCCTTCCCTaGGCCCTTTATCCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKHLALP*ALYPSG
Trigger: TCCACTTGGATAAAGGGCCAAGGGAAGGGCAAGATG...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTCAGTACTCTTGTTTTaGGCCCCACTCTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRSVLLF*APLSKG
Trigger: GCCTTTGGAGAGTGGGGCCAAAAACAAGAGTACTGA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCAACTTTTGTCCTCTGTaGCAAACTAAGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTNFCPL*QTKQVL
Trigger: CAGCACTTGCTTAGTTTGCAACAGAGGACAAAAGTT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCCAAAAGGAGGTGGCATaGACATGTTCCCCATATACT +
Preference number: 5 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSQKEVA*TCSPYT
Trigger: AGTATATGGGGAACATGTCAATGCCACCTCCTTTTG...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCCAAATCTTGGGCCTCTaGGACTTTCCAAGTAACTAC +
Preference number: 5 (lower is better)
Translates to: ILSVGILQQTPAWLQQLSQILGL*DFPSNY
Trigger: GTAGTTACTTGGAAAGTCCAAGAGGCCCAAGATTTG...GCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCCTTCATATCTGGGTCTaGGCCCATCGGGGCGATTTC +
Preference number: 5 (lower is better)
Translates to: CPTTKPMALFLSASFFSSLHIWV*AHRGDF
Trigger: GAAATCGCCCCGATGGGCCAAGACCCAGATATGAAG...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CAA 90 bp GGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAAGGCCTTTATCTTGGTaGTTTTCTGAATGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: GGNTLCWNPPADPRLASARPLSW*FSEWGR
Trigger: TCTACCCCATTCAGAAAACAACCAAGATAAAGGCCT...TGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp ACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCGCTCTGTCTCAAAAGTaGATCTTTCAGGTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: TWKQGDTQRSSARPWLQTALSQK*IFQVVD
Trigger: ATCCACTACCTGAAAGATCAACTTTTGAGACAGAGC...GGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGGCTCTGTCTCAAAAGTaGATCTTTCAGGTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: EEILSVGILQQTPAWLQQALSQK*IFQVVD
Trigger: ATCCACTACCTGAAAGATCAACTTTTGAGACAGAGC...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCAACTTGTCTAGCTTaGCCTCAGATGTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRPTCLA*PQMCPS
Trigger: AGATGGACACATCTGAGGCAAAGCTAGACAAGTTGG...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CAGCTGTTAGGCTGGCATCTGATTCTGCAGGTGCCGGGTATATCTGGTCACAGATACACTTCCCTCTTCTaGACTTCTCCCTTGACTGTG +
Preference number: 5 (lower is better)
Translates to: QLLGWHLILQVPGISGHRYTSLF*TSPLTV
Trigger: CACAGTCAAGGGAGAAGTCAAGAAGAGGGAAGTGTA...TCTGTGACCAGATATACCCGGCACCTGCAGAATCAGATGCCAGCCTAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCCCTCAACATCTTCACTaGGGCAACAGGTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRPQHLH*GNRWKQ
Trigger: CTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGG...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGGACTGGATGGACCTCTaGTTTGTACAGTTCAACCGC +
Preference number: 5 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKDWMDL*FVQFNR
Trigger: GCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTC...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp ACTTTCCAAGTAACTACTTCTAGGAGGATCTGGAAGCAGGCCACCTaGTCTCACTGGCATGTCCTTCACTGCAGTGATTGGCTGAGATGG +
Preference number: 5 (lower is better)
Translates to: TFQVTTSRRIWKQAT*SHWHVLHCSDWLRW
Trigger: CCATCTCAGCCAATCACTGCAGTGAAGGACATGCCAGTGAGATCAGGTGGCCTGCTTCCAGATCCTCCTAGAAGTAGTTACTTGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 90 bp TCTCGTTCCATTGGAGCATTTCTACCATCTAATGGAAACTCTTCATaGCCTCGCTCTTCTCCATGGTTCCATGGAGCCCTAGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SRSIGAFLPSNGNSS*PRSSPWFHGALGGS
Trigger: TGAGCCTCCTAGGGCTCCATGGAACCATGGAGAAGAGCGAGGGCATGAAGAGTTTCCATTAGATGGTAGAAATGCTCCAATGGAACGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp CTCATTTGGAGGTGGCAATGGGGGCTCCTCAGAAGAAGGAGATTCTaGAACTTGACTGGTGGCAGGTACTGTAACTTCTTCTTTTACCGG +
Preference number: 5 (lower is better)
Translates to: LIWRWQWGLLRRRRF*NLTGGRYCNFFFYR
Trigger: CCGGTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCTCCAAATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 90 bp ATAAGTCCTTCGTTCTCCTCCAAACATGGATGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTCATAGGATGGCCTATCAAAACCCCC +
Preference number: 5 (lower is better)
Translates to: ISPSFSSKHGWSFID*SVRLPVIGWPIKTP
Trigger: GGGGGTTTTGATAGGCCATCCTATGACCGGAAGTCTGACCGACCAGTCTATGAAGGACCATCCATGTTTGGAGGAGAACGAAGGACTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCAAGATGTTGAAACTGTaGCTGCTGCATCTCATAATG +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTKMLKL*LLHLIM
Trigger: CATTATGAGATGCAGCAGCAACAGTTTCAACATCTT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGAAGATGTTGAAACTGTaGCTGCTGCATCTCATAATG +
Preference number: 5 (lower is better)
Translates to: EEILSVGILQQTPAWLQQKMLKL*LLHLIM
Trigger: CATTATGAGATGCAGCAGCAACAGTTTCAACATCTT...CTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAACGGAGGATGGTAAGTaGTCGGTGGGGCAGAACCAA +
Preference number: 5 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRTEDGK*SVGQNQ
Trigger: TTGGTTCTGCCCCACCGACAACTTACCATCCTCCGT...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATCACTCCTGCTCAAAGGAGCTTTaGAATTCACTTGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: VGILQQTPAWLQQLSYHSCSKEL*NSLVLM
Trigger: CATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCA...GGAGTGATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTATGGCAGAGCAGACTaGCTCAAAGGAGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: REALASDHLKANHLRGIMYGRAD*LKGAFE
Trigger: TTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACTCAAAACGAGGCCCTTaGGGTCTCGGTCCTTCACAC +
Preference number: 5 (lower is better)
Translates to: SVTLYSGGNTLCWNPPADSKRGP*GLGPSH
Trigger: GTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGA...GTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATTTGGGCTTTGTCGATTaGAGTCTCCATACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYLGFVD*SLHTLN
Trigger: GTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAA...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCGATACATTCCAGGTCTaGAAGATGTATTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: WRKYSLLESSSRPPPGFSDTFQV*KMYSAI
Trigger: GATTGCAGAATACATCTTCAAGACCTGGAATGTATC...GCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATTATCGTCCACATTCTTaGATTCAGGCTTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYYRPHS*IQASSR
Trigger: TCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATA...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCTATCGTCCACATTCTTaGATTCAGGCTTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSYRPHS*IQASSR
Trigger: TCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATA...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGCCTAACTCTGTCATaGATGGCATCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFCLTLS*MASRMM
Trigger: CATCATCCTGGATGCCATCAATGACAGAGTTAGGCA...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp GGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTTTCAATAGCAGCATCTaGCAGCAAAGAACGAATATC +
Preference number: 5 (lower is better)
Translates to: GSKVTHKEAPRGLGFRPPFNSSI*QQRTNI
Trigger: GATATTCGTTCTTTGCTGCAAGATGCTGCTATTGAA...AGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTATGAAGGCAACAAGCTaGAGTTCCACAGAATACATC +
Preference number: 5 (lower is better)
Translates to: YSGGNTLCWNPPADPRLAMKATS*SSTEYI
Trigger: GATGTATTCTGTGGAACTCAAGCTTGTTGCCTTCAT...AGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCAAATGCAAATTATGCTaGAGGAAGAAGGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTKCKLC*RKKALS
Trigger: TGAGAGAGCCTTCTTCCTCAAGCATAATTTGCATTT...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp CACAAAGATTACAGCCTCAACATCTTCACTTGGGCAACAGGTGGAAGCAGCAAAAGAGGAGTCCTAGGGTaGCAGAATCAGGGGCCACTA +
Preference number: 5 (lower is better)
Translates to: HKDYSLNIFTWATGGSSKRGVLG*QNQGPL
Trigger: TAGTGGCCCCTGATTCTGCAACCCTAGGACTCCTCT...TTTGCTGCTTCCACCTGTTGCCCAAGTGAAGATGTTGAGGCTGTAATCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp GTGCACTTCAAGCTCCCCTTAGTGTTGCTGATGGAAGCAATGTCCAGTTCTGGGATCAAGAGATGCATGTaGCCTCATGCACAGCTGACA +
Preference number: 5 (lower is better)
Translates to: VHFKLPLVLLMEAMSSSGIKRCM*PHAQLT
Trigger: TGTCAGCTGTGCATGAGGCAACATGCATCTCTTGAT...CCCAGAACTGGACATTGCTTCCATCAGCAACACTAAGGGGAGCTTGAAGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp TCTTTGTTTCCTGAAAGAGGTTCTGCTTGTGACTTAGGTTGCTGCTaGTGCTGCTGTCCAAAAGCTGGTTTGGGGCCTTTCCACTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLFPERGSACDLGCC*CCCPKAGLGPFHCG
Trigger: ACCACAGTGGAAAGGCCCCAAACCAGCTTTTGGACAGCAGCATCAGCAGCAACCTAAGTCACAAGCAGAACCTCTTTCAGGAAACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp CCATCATTTCTGAGGAATGATGTGAGGAGGGCATATGTTCCGCCATaGGGGAATGTCTATCCACATCAGATGGGTACCATCTGTCTGACA +
Preference number: 5 (lower is better)
Translates to: PSFLRNDVRRAYVPP*GNVYPHQMGTICLT
Trigger: TGTCAGACAGATGGTACCCATCTGATGTGGATAGACATTCCCCCATGGCGGAACATATGCCCTCCTCACATCATTCCTCAGAAATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTCTCGCTCCCATTCTaGGTAAAGATGTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPLSLPF*VKMLKL
Trigger: CAGTTTCAACATCTTTACCAAGAATGGGAGCGAGAG...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATTGCTCAAAGGAGCTTTaGAATTCACTTGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYCSKEL*NSLVLM
Trigger: CATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCA...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCTTGAGTCTCCATACTTaGAACATTCTGGTCCCAATT +
Preference number: 5 (lower is better)
Translates to: KVTHKEAPRGLGFRPPQSLSLHT*NILVPI
Trigger: AATTGGGACCAGAATGTTCAAAGTATGGAGACTCAA...GCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp AAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGATTGGGCTTTGTCGATTaGAGTCTCCATACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: KRGSKVTHKEAPRGLGFRLGFVD*SLHTLN
Trigger: GTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAA...TCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp CTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTAAGCTATGATACATTCCAGGTCTaGAAGATGTATTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: LSVGILQQTPAWLQQLSYDTFQV*KMYSAI
Trigger: GATTGCAGAATACATCTTCAAGACCTGGAATGTATC...ATAGCTTAACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCATTGAACCTGGTGGTTaGCCCATAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSIEPGG*PIGGGG
Trigger: ACCTCCCCCTCCTATGGGCAAACCACCAGGTTCAAT...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCCAGGAACAGATGATCTaGCTGGTGGAGCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSQEQMI*LVEQRV
Trigger: GACCCTCTGCTCCACCAGCAAGATCATCTGTTCCTG...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTGCTATGACATTACTTaGACGATCAAAATAAGGCTC +
Preference number: 5 (lower is better)
Translates to: HKEAPRGLGFRPPQSEPPCYDIT*TIKIRL
Trigger: GAGCCTTATTTTGATCGTCAAAGTAATGTCATAGCA...AGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTATCGTCCACATTCTTaGATTCAGGCTTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: REALASDHLKANHLRGIMYRPHS*IQASSR
Trigger: TCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCATCATCCAGAGTCTTTTaGAAAGTTTTGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: RGSKVTHKEAPRGLGFRPSSRVF*KVLNML
Trigger: CAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGA...TGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACACAAAGAAGCTCCGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTCATCCAGAGTCTTTTaGAAAGTTTTGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: TQRSSARPWLQTTSKRTTSSRVF*KVLNML
Trigger: CAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGA...GGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTTCTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTCAAATCCCTTGGTTTTaGCTGCACTCCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: QESSISHTGSMGPLPGDSQIPWF*LHSKTG
Trigger: ACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTG...AGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS TCA 90 bp GGATACATTCCAGGTCTTGAAGATGTATTCTGCAATCTTGATTCCTaGGGTGGTAGATGGTCAGCCATCTGTGGCTCAGACCCGAAGTCT +
Preference number: 5 (lower is better)
Translates to: GYIPGLEDVFCNLDS*GGRWSAICGSDPKS
Trigger: AGACTTCGGGTCTGAGCCACAGATGGCTGACCATCTACCACCTCAGGAATCAAGATTGCAGAATACATCTTCAAGACCTGGAATGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 90 bp CCACATGGCATACTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCAGTTCGCTTTCCTCTTCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PHGILALPQMCPSPI*FSECNPVRFPLPLH
Trigger: ATGCAGAGGAAGAGGAAAGCGAACTGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGTATGCCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS CCA 90 bp CGGCTCTGGTGTATCCTTTGCTACCACAGGACCCTTTTTGTGTCCTaGCAAATGAACTTTTGTCCTCTGTTGCAAACTAAGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RLWCILCYHRTLFVS*QMNFCPLLQTKQVL
Trigger: CAGCACTTGCTTAGTTTGCAACAGAGGACAAAAGTTCATTTGCCAGGACACAAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 90 bp AACTTGACTGGTGGCAGGTACTGTAACTTCTTCTTTTACCGGCTCTaGTGTATCCTTTGCTACCACAGGACCCTTTTTGTGTCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: NLTGGRYCNFFFYRL*CILCYHRTLFVSWQ
Trigger: TTGCCAGGACACAAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGCCGGTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 90 bp GTCAGGAACATAATCTCGCTTTTCCCGCCATGTATCTCCTCTTTCTaGATACTCTCGAATCCTCAACTCACCCCTATCACGGAAATCTCG +
Preference number: 5 (lower is better)
Translates to: VRNIISLFPPCISSF*ILSNPQLTPITEIS
Trigger: CGAGATTTCCGTGATAGGGGTGAGTTGAGGATTCGAGAGTATCCAGAAAGAGGAGATACATGGCGGGAAAAGCGAGATTATGTTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 90 bp GGCTCTGGCACCAGTGCTTCCCAACCTCACGTCTTTTCTTTCTTGTaGGTCTCTTTGGAAATGCAGGTTCCAGATTGCTTCTTGGAAATT +
Preference number: 5 (lower is better)
Translates to: GSGTSASQPHVFSFL*VSLEMQVPDCFLEI
Trigger: AATTTCCAAGAAGCAATCTGGAACCTGCATTTCCAAAGAGACCCACAAGAAAGAAAAGACGTGAGGTTGGGAAGCACTGGTGCCAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553381.1
ENST00000554107.2
CDS-3UTR CAA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGATCAGTACTCTTGTTTTaGGCCCCACTCTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRSVLLF*APLSKG
Trigger: GCCTTTGGAGAGTGGGGCCAAAAACAAGAGTACTGA...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCAACTTTTGTCCTCTGTaGCAAACTAAGCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRNFCPL*QTKQVL
Trigger: CAGCACTTGCTTAGTTTGCAACAGAGGACAAAAGTT...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAAGGAGATTCTGGAACTaGACTGGTGGCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRRRFWN*TGGRYC
Trigger: ACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCT...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGTGGCACTTCCTCATTaGGAGGTGGCAATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AVETKQELKRGSKVTHKEVALPH*EVAMGA
Trigger: AGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCAC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGACGAAAGTCTTCTTGCTaGACCAATCCTGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: INVLLGYSKILIPLGDTGRKSSC*TNPGPR
Trigger: TCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCG...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TATGTTTCTGGGTTCCACCTGGTATTAACCACAAGAGAGGAAATTCTGTGCAGATGTACTGGTGGTGGCTaGGACATTGGTGGCATACCC +
Preference number: 5 (lower is better)
Translates to: YVSGFHLVLTTREEILCRCTGGG*DIGGIP
Trigger: GGGTATGCCACCAATGTCCAAGCCACCACCAGTACA...TCTGCACAGAATTTCCTCTCTTGTGGTTAATACCAGGTGGAACCCAGAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp GGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCCTGGCTTCAGCAGTTTGCTATGACATTACTTaGACGATCAAAATAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GNTLCWNPPADPRLASAVCYDIT*TIKIRL
Trigger: GAGCCTTATTTTGATCGTCAAAGTAATGTCATAGCA...AACTGCTGAAGCCAGGCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATCGGGGAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTGCTATGACATTACTTaGACGATCAAAATAAGGCTC +
Preference number: 5 (lower is better)
Translates to: IGELKIILHSAGNGLPVTCYDIT*TIKIRL
Trigger: GAGCCTTATTTTGATCGTCAAAGTAATGTCATAGCA...CGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTCCCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CAA 90 bp CGCGAGGCCTTGGCTTCAGACCACCTCAAAGCGAACCACCTTAGAGGAATAATGTTCAATAGCAGCATCTaGCAGCAAAGAACGAATATC +
Preference number: 5 (lower is better)
Translates to: REALASDHLKANHLRGIMFNSSI*QQRTNI
Trigger: GATATTCGTTCTTTGCTGCAAGATGCTGCTATTGAA...CATTATTCCTCTAAGGTGGTTCGCTTTGAGGTGGTCTGAAGCCAAGGCCTCGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAAAGCTCCGCGAGGCCTaGGCTTCAGACCACCTCAAA +
Preference number: 5 (lower is better)
Translates to: AVETKQELKRGSKVTHKEKLREA*ASDHLK
Trigger: TTTGAGGTGGTCTGAAGCCAAGGCCTCGCGGAGCTT...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: NKTRTETWKQGDTQRSSARKYSL*ESSSRP
Trigger: GGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCT...CGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TGGCAAATGTCTGACTGGATGGACCTCTTGTTTGTACAGTTCAACCGCTGCATTGTGGTCATCCACTGGTaGACTGGTGAGTCAGAGTAT +
Preference number: 5 (lower is better)
Translates to: WQMSDWMDLLFVQFNRCIVVIHW*TGESEY
Trigger: ATACTCTGACTCACCAGTCAACCAGTGGATGACCAC...AATGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCCAGTCAGACATTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTAAGAGGCAGTGTGTTTaGCCTGGTGTGAGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCIKRQCV*PGVRQV
Trigger: GACTTGCCTCACACCAGGCAAAACACACTGCCTCTT...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTCTCTGCTTGGGGTTTaGAAATGGTTTATCTGGGAT +
Preference number: 5 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKSLLGV*KWFIWD
Trigger: ATCCCAGATAAACCATTTCAAAACCCCAAGCAGAGA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS GCA 90 bp CATCCAACTTGTCTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCAGTTCGCTTTCCTCTTCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: HPTCLALPQMCPSPI*FSECNPVRFPLPLH
Trigger: ATGCAGAGGAAGAGGAAAGCGAACTGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGACAAGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp ACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGCTGCTCAAAGGAGCTTTaGAATTCACTTGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: TLYSGGNTLCWNPPADPRCSKEL*NSLVLM
Trigger: CATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCA...GCGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGCTTCATATCTGGGTCTaGGCCCATCGGGGCGATTTC +
Preference number: 5 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWLHIWV*AHRGDF
Trigger: GAAATCGCCCCGATGGGCCAAGACCCAGATATGAAG...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCGGAATCATTCCCCACTaGCTTTTAGTGCCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSGIIPH*LLVPSA
Trigger: AGCAGAGGGCACTAAAAGCAAGTGGGGAATGATTCC...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCCCCGTTGAGTCTCCATACTTaGAACATTCTGGTCCCAATT +
Preference number: 5 (lower is better)
Translates to: DIVQWRKYSLLESSSRPPLSLHT*NILVPI
Trigger: AATTGGGACCAGAATGTTCAAAGTATGGAGACTCAA...CGGGGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCCAGGAACAGATGATCTaGCTGGTGGAGCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSQEQMI*LVEQRV
Trigger: GACCCTCTGCTCCACCAGCAAGATCATCTGTTCCTG...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCTGTATGCTCTGTCTCAAAAGTaGATCTTTCAGGTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: SPLYHTRVRWDHSLEILYALSQK*IFQVVD
Trigger: ATCCACTACCTGAAAGATCAACTTTTGAGACAGAGC...ATACAGAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGACCAACTTGTCTAGCTTaGCCTCAGATGTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRPTCLA*PQMCPS
Trigger: AGATGGACACATCTGAGGCAAAGCTAGACAAGTTGG...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp TCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGAGATTCCCTGAGCAAAATCCATaGCCTACACAGTCATTTAAT +
Preference number: 5 (lower is better)
Translates to: SRVLYITHGFDGTTPWRFPEQNP*PTQSFN
Trigger: ATTAAATGACTGTGTAGGCAATGGATTTTGCTCAGG...GAATCTCCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp AGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTGTTGACAGAATAGGTCGCATATTCTaGAATGACAGGGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: SGNPLPPHSISSSASVDRIGRIF*NDRERQ
Trigger: TTGCCTTTCCCTGTCATTCAAGAATATGCGACCTAT...TCTGTCAACAGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS TCA 90 bp GGTGTATCCTTTGCTACCACAGGACCCTTTTTGTGTCCTGGCAAATaGACTTTTGTCCTCTGTTGCAAACTAAGCAAGTGCTGTCGATAC +
Preference number: 5 (lower is better)
Translates to: GVSFATTGPFLCPGK*TFVLCCKLSKCCRY
Trigger: GTATCGACAGCACTTGCTTAGTTTGCAACAGAGGACAAAAGTTCATTTGCCAGGACACAAAAAGGGTCCTGTGGTAGCAAAGGATACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS TCA 90 bp GCTCTTGTTGAGAGTCGCTTAGATTCTCATTTGACTGAGCCGCCTTaGCATCCTTTACATCTGCAGCAATGGAAAATGCAGCTGATTGCA +
Preference number: 5 (lower is better)
Translates to: ALVESRLDSHLTEPP*HPLHLQQWKMQLIA
Trigger: TGCAATCAGCTGCATTTTCCATTGCTGCAGATGTAAAGGATGTCAAGGCGGCTCAGTCAAATGAGAATCTAAGCGACTCTCAACAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS GCA 90 bp CATCCAACTTGTCTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCTAAATCGTACACAGAGAGAAGCTCG +
Preference number: 5 (lower is better)
Translates to: HPTCLALPQMCPSPI*FSECNPKSYTERSS
Trigger: CGAGCTTCTCTCTGTGTACGATTTAGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550021.1
CDS-3UTR CAA 90 bp TGTCCGACCACAAAACCTATGGCCCTTTTCCTATCTGCATCCTTCTTCTCTTCCAGGCCTTTATCTTGGTaGTTTTCTGAATGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: CPTTKPMALFLSASFFSSRPLSW*FSEWGR
Trigger: TCTACCCCATTCAGAAAACAACCAAGATAAAGGCCT...GGAAGAGAAGAAGGATGCAGATAGGAAAAGGGCCATAGGTTTTGTGGTCGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CAA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGATTGAACCTGGTGGTTaGCCCATAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQIEPGG*PIGGGG
Trigger: ACCTCCCCCTCCTATGGGCAAACCACCAGGTTCAAT...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACAAATCTAGCAGCCAGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTTATCGTCCACATTCTTaGATTCAGGCTTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: TNLAASGNPLPPHSISSSYRPHS*IQASSR
Trigger: TCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATA...AGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACTGGCTGCTAGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp ATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCTGCCTAACTCTGTCATaGATGGCATCCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: IVCDIVQWRKYSLLESSSCLTLS*MASRMM
Trigger: CATCATCCTGGATGCCATCAATGACAGAGTTAGGCA...GCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TTTTTATCAAGAGTCCTCTATATCACACACGGGTTCGATGGGACCACTCCCTGGTATACCTCAAATCCCTaGGTTTTTGCTGCACTCCAA +
Preference number: 5 (lower is better)
Translates to: FLSRVLYITHGFDGTTPWYTSNP*VFAALQ
Trigger: TTGGAGTGCAGCAAAAACCAAGGGATTTGAGGTATA...CCAGGGAGTGGTCCCATCGAACCCGTGTGTGATATAGAGGACTCTTGATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp AGTGGCAACCCTCTGCCTCCCCATTCAATAAGTTCTTCTGCCTCTGTTGACAGATTCAATAGCAGCATCTaGCAGCAAAGAACGAATATC +
Preference number: 5 (lower is better)
Translates to: SGNPLPPHSISSSASVDRFNSSI*QQRTNI
Trigger: GATATTCGTTCTTTGCTGCAAGATGCTGCTATTGAA...TCTGTCAACAGAGGCAGAAGAACTTATTGAATGGGGAGGCAGAGGGTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp GAGCTGAAGATAATCCTCCATTCTGCTGGCAATGGCCTCCCAGTCACGTTTCCTAGAAAAATTAACGTCTaGCTTGGGTACAGCAAGATT +
Preference number: 5 (lower is better)
Translates to: ELKIILHSAGNGLPVTFPRKINV*LGYSKI
Trigger: AATCTTGCTGTACCCAAGCAAGACGTTAATTTTTCT...AGGAAACGTGACTGGGAGGCCATTGCCAGCAGAATGGAGGATTATCTTCAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS-3UTR CAA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATACCGAAGTCTCTTaGAGCCACAGATTTACTTTC +
Preference number: 5 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRNTEVS*SHRFTF
Trigger: GAAAGTAAATCTGTGGCTCAAAGAGACTTCGGTATT...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp CTTCCCTATATGATTCGAGTTTTAGGAAAGATCCCTCTTCTGTGTCTCCTTAAGATGACAGTCAGAAGCTaGGGGGCACTCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: LPYMIRVLGKIPLLCLLKMTVRS*GALLST
Trigger: TGTGGAAAGGAGTGCCCCCAAGCTTCTGACTGTCAT...CTTAAGGAGACACAGAAGAGGGATCTTTCCTAAAACTCGAATCATATAGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp CGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCTTCCACAATTCAAAGTaGCTAATAAACTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RQAISDGVTNPKMLVVLRFHNSK*LINCSL
Trigger: CAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAA...GCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATCTGAAATTGCTTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGAAAGCTCCCCTTAGTGTaGCTGATGGAAGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGKLPLV*LMEAMS
Trigger: GGACATTGCTTCCATCAGCAACACTAAGGGGAGCTT...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGCCAGGCAAATGGAGAGTGGGTACCACCCAACCATTCAAGCTTCTTGAGCAAGTACACCAACCTGTATTaGACATCATCTATGCTACAT +
Preference number: 5 (lower is better)
Translates to: CQANGEWVPPNHSSFLSKYTNLY*TSSMLH
Trigger: ATGTAGCATAGATGATGTCAAATACAGGTTGGTGTA...CTTGCTCAAGAAGCTTGAATGGTTGGGTGGTACCCACTCTCCATTTGCCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp TTCCAACAACAGAGCACAGCCAGGCAGCAATACAGAAGGGCAGTGTaGAAACTGCAAGAACTTTTCCTCATACACTGGGTATATATGACA +
Preference number: 5 (lower is better)
Translates to: FQQQSTARQQYRRAV*KLQELFLIHWVYMT
Trigger: TGTCATATATACCCAGTGTATGAGGAAAAGTTCTTGCAGTTTTCACACTGCCCTTCTGTATTGCTGCCTGGCTGTGCTCTGTTGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS GCA 90 bp CAAGTCCTTGATCAGATGAGAATGAACTGTATGGCAGAGCAGACTTaGTCAAAGGAGCTTTTGAATTCACTTGTTCTGATGGACCAGCTG +
Preference number: 5 (lower is better)
Translates to: QVLDQMRMNCMAEQT*SKELLNSLVLMDQL
Trigger: CAGCTGGTCCATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATACAGTTCATTCTCATCTGATCAAGGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGCCATGCTTTCCAGTAATGAACAGAGGGTCTTACAATaGAACCTGGTGGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: INHKRGNSVQKAMLSSNEQRVLQ*NLVVCP
Trigger: TGGGCAAACCACCAGGTTCAATTGTAAGACCCTCTG...TTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCCAAATCCCTTGGTTTTaGCTGCACTCCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSQIPWF*LHSKTG
Trigger: ACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTG...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATTAACGTCTTGCTTGGGTACAGCAAGATTCTAATACCTCTTGGGGACACTGGACAAATCCCTTGGTTTTaGCTGCACTCCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: INVLLGYSKILIPLGDTGQIPWF*LHSKTG
Trigger: ACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTG...TCCAGTGTCCCCAAGAGGTATTAGAATCTTGCTGTACCCAAGCAAGACGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTaGGAATCCTCCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWRKYSL*ESSSRP
Trigger: GGGTCTGCTGGAGGATTCCAACAGAGAGTATTTCCT...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp CACCACACACACACACACACACACACACACACACAAAATACACCAACCTGTATTTTGGAAATTGCCAGCTaGACGTTACAGGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HHTHTHTHTHTQNTPTCILEIAS*TLQEFF
Trigger: GAAGAACTCCTGTAACGTCAAGCTGGCAATTTCCAA...AATACAGGTTGGTGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCGTTCTTTCTGTTCCCTaGGGCCTCTTGGACTTTCCA +
Preference number: 5 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSVLSVP*GLLDFP
Trigger: TGGAAAGTCCAAGAGGCCCAAGGGAACAGAAAGAAC...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552421.5
CDS TCA 90 bp TATATGACGGGCCGTATTATACATGATCTTAAAGAAGTGACCCCCTaGCTGCACAGGGACACAGGTTATGGTATTAGAAAACCAACGAAG +
Preference number: 5 (lower is better)
Translates to: YMTGRIIHDLKEVTP*LHRDTGYGIRKPTK
Trigger: CTTCGTTGGTTTTCTAATACCATAACCTGTGTCCCTGTGCAGTCAGGGGGTCACTTCTTTAAGATCATGTATAATACGGCCCGTCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS-3UTR CAA 90 bp AACAGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGGGTCAGAGTCTAAGCTaGCATCGGACCCCATCATTT +
Preference number: 5 (lower is better)
Translates to: NRNSHKAMMIEIVCDIVQGQSLS*HRTPSF
Trigger: AAATGATGGGGTCCGATGCAAGCTTAGACTCTGACC...CTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCTATACCTCAAATCCCTaGGTTTTTGCTGCACTCCAA +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSYTSNP*VFAALQ
Trigger: TTGGAGTGCAGCAAAAACCAAGGGATTTGAGGTATA...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCCGCGATTCAATAGCAGCATCTaGCAGCAAAGAACGAATATC +
Preference number: 5 (lower is better)
Translates to: TKQELKRGSKVTHKEAPRFNSSI*QQRTNI
Trigger: GATATTCGTTCTTTGCTGCAAGATGCTGCTATTGAA...TCGCGGAGCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACGTTCCAGATTGCTTCTaGGAAATTGCCAGCTTGACG +
Preference number: 5 (lower is better)
Translates to: KMLVVLRNSELFQALNMHVPDCF*EIASLT
Trigger: CGTCAAGCTGGCAATTTCCAAGAAGCAATCTGGAAC...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACATTCTTGTGGGTCTCTTaGGAAATGCAGGTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTFLWVS*EMQVPD
Trigger: ATCTGGAACCTGCATTTCCAAAGAGACCCACAAGAA...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGGGATGGACCTCTTGTTaGTACAGTTCAACCGCTGCA +
Preference number: 5 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLGWTSC*YSSTAA
Trigger: TGCAGCGGTTGAACTGTACAAACAAGAGGTCCATCC...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCAGGGCCTCTTTTACTTaGGGTGTTGGGTTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIRASFT*GVGLGA
Trigger: AGCCCCTAACCCAACACCCAAAGTAAAAGAGGCCCT...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS CCA 90 bp CTATTATCTGGCCGAGGCAGGCCTTTATCTTGGTTGTTTTCTGAATaGGGTAGACCAATACCCACAGGTTTAAAATCATTATCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLSGRGRPLSWLFSE*GRPIPTGLKSLSAV
Trigger: AACAGCAGATAATGATTTTAAACCTGTGGGTATTGGTCTACCCCATTCAGAAAACAACCAAGATAAAGGCCTGCCTCGGCCAGATAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAACTCTCCAAAGGCTCTaGCTGGACAGTTGTCTTATT +
Preference number: 5 (lower is better)
Translates to: AVETKQELKRGSKVTHKETLQRL*LDSCLI
Trigger: AATAAGACAACTGTCCAGCAAGAGCCTTTGGAGAGT...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS-3UTR CAA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAACAAAAGGAGGTGGCATaGACATGTTCCCCATATACT +
Preference number: 5 (lower is better)
Translates to: AVETKQELKRGSKVTHKEQKEVA*TCSPYT
Trigger: AGTATATGGGGAACATGTCAATGCCACCTCCTTTTG...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGCTCTGTCTCAAAAGTaGATCTTTCAGGTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRALSQK*IFQVVD
Trigger: ATCCACTACCTGAAAGATCAACTTTTGAGACAGAGC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGCAAATCCCTTGGTTTTaGCTGCACTCCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWQIPWF*LHSKTG
Trigger: ACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTG...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp GTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGCAGAGATGAATATTTGAACTaGGTCAGTCTTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: VCDIVQWRKYSLLESSSRDEYLN*VSLQDT
Trigger: TGTGTCTTGAAGACTGACCAAGTTCAAATATTCATC...TCTGCTGGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp AGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTCTGCACTGTTCAAAGTGGTaGGTCTGTCTCCTACCAGTT +
Preference number: 5 (lower is better)
Translates to: STLLKLSLNTTLEGSFGLHCSKW*VCLLPV
Trigger: AACTGGTAGGAGACAGACCAACCACTTTGAACAGTG...CAGACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACCTGTCTTATCAAGGTTaGTGTCTGATGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: KMLVVLRNSELFQALNMHLSYQG*CLMRKQ
Trigger: CTGCTTCCTCATCAGACACAAACCTTGATAAGACAG...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TGGGTTCCCATGAGATCTGATGAGTGTCTTCCCTATATGATTCGAGTTTTAGGATTCTTGACTTCTCCCTaGACTGTGATCACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: WVPMRSDECLPYMIRVLGFLTSP*TVITKS
Trigger: ACTCTTTGTGATCACAGTCAAGGGAGAAGTCAAGAA...TCCTAAAACTCGAATCATATAGGGAAGACACTCATCAGATCTCATGGGAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp AAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTGTCATCCAGCTTATTaGACCAGAGTTTCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KMLVVLRNSELFQALNMHCHPAY*TRVSRD
Trigger: GTCTCTGGAAACTCTGGTCAAATAAGCTGGATGACA...GTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp TTGACATGTTCCCCATATACTGGTTCTTCATGTTCTGAAATGAATTaGCTTTCTCCTGGAGATAGCTCTGAGTGGCTTTCATATGTCCCT +
Preference number: 5 (lower is better)
Translates to: LTCSPYTGSSCSEMN*LSPGDSSEWLSYVP
Trigger: AGGGACATATGAAAGCCACTCAGAGCTATCTCCAGGAGAAAGTCAATTCATTTCAGAACATGAAGAACCAGTATATGGGGAACATGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp ATTAACCACAAGAGAGGAAATTCTGTGCAGAAGGCCATGCTTTCCAGTAATGAAGTCTTTCTCGTTCCATaGGAGCATTTCTACCATCTA +
Preference number: 5 (lower is better)
Translates to: INHKRGNSVQKAMLSSNEVFLVP*EHFYHL
Trigger: TAGATGGTAGAAATGCTCCAATGGAACGAGAAAGAC...TTCATTACTGGAAAGCATGGCCTTCTGCACAGAATTTCCTCTCTTGTGGTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325680.12
CDS-3UTR CAA 90 bp GCAGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGTCTTTCTCGTTCCATaGGAGCATTTCTACCATCTA +
Preference number: 5 (lower is better)
Translates to: AVETKQELKRGSKVTHKEVFLVP*EHFYHL
Trigger: TAGATGGTAGAAATGCTCCAATGGAACGAGAAAGAC...TTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp AACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGAGGGATACATTCCAGGTCTaGAAGATGTATTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: NSHKAMMIEIVCDIVQWRDTFQV*KMYSAI
Trigger: GATTGCAGAATACATCTTCAAGACCTGGAATGTATC...CCTCCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTATACCTCAAATCCCTaGGTTTTTGCTGCACTCCAA +
Preference number: 5 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSYTSNP*VFAALQ
Trigger: TTGGAGTGCAGCAAAAACCAAGGGATTTGAGGTATA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGAAACAGCCACAAAGCAATGATGATAGAGATAGTCTGTGACATTGTACAGTGGTATACCTCAAATCCCTaGGTTTTTGCTGCACTCCAA +
Preference number: 5 (lower is better)
Translates to: RNSHKAMMIEIVCDIVQWYTSNP*VFAALQ
Trigger: TTGGAGTGCAGCAAAAACCAAGGGATTTGAGGTATA...CCACTGTACAATGTCACAGACTATCTCTATCATCATTGCTTTGTGGCTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TGCTGGTGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACATTCAATAGCAGCATCTaGCAGCAAAGAACGAATATC +
Preference number: 5 (lower is better)
Translates to: CWWFSAIQNFFKLSICTTFNSSI*QQRTNI
Trigger: GATATTCGTTCTTTGCTGCAAGATGCTGCTATTGAA...TGTAGTGCATATTGAGAGCTTGAAAAAGTTCTGAATTGCGGAGAACCACCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp GAGATAGTCTGTGACATTGTACAGTGGAGGAAATACTCTCTGTTGGAATCCTCCAGAAAAATTAACGTCTaGCTTGGGTACAGCAAGATT +
Preference number: 5 (lower is better)
Translates to: EIVCDIVQWRKYSLLESSRKINV*LGYSKI
Trigger: AATCTTGCTGTACCCAAGCAAGACGTTAATTTTTCT...GGAGGATTCCAACAGAGAGTATTTCCTCCACTGTACAATGTCACAGACTATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp AGGCAAACATCTCTACAGAGGTGTGATCGAAAGCATTTTACATTAGGTACACAGACAATTATGCATATGTaGGGTAGGCTGTGCCACATA +
Preference number: 5 (lower is better)
Translates to: RQTSLQRCDRKHFTLGTQTIMHM*GRLCHI
Trigger: TATGTGGCACAGCCTACCCAACATATGCATAATTGT...CTGTGTACCTAATGTAAAATGCTTTCGATCACACCTCTGTAGAGATGTTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp GATGGTGTCACAAATCCCAAAATGCTGGTGGTTCTCCGCAATTCAGAACTTTTTGGGCTGTTAATACTTTaGGTCTACATCATTCAAGCT +
Preference number: 5 (lower is better)
Translates to: DGVTNPKMLVVLRNSELFGLLIL*VYIIQA
Trigger: AGCTTGAATGATGTAGACCAAAAGTATTAACAGCCC...AAAAAGTTCTGAATTGCGGAGAACCACCAGCATTTTGGGATTTGTGACACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TCACAGTCTAGACGAGACAAACATACAGTAAAAATTCCAATAAGGTCATCGCTGTTATCTGGGATAGAATaGCCATCTCTTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: SQSRRDKHTVKIPIRSSLLSGIE*PSLPIP
Trigger: TGGGATGGGAAGAGATGGCAATTCTATCCCAGATAA...CAGCGATGACCTTATTGGAATTTTTACTGTATGTTTGTCTCGTCTAGACTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp GAAGCTCGAAGGGTTAGAAAGAGACACATACATGCATATCACGTTTaGACTGGAAAAGCATTAAAACTGGGAATGGATTCAGTTTCCACT +
Preference number: 5 (lower is better)
Translates to: EARRVRKRHIHAYHV*TGKALKLGMDSVST
Trigger: AGTGGAAACTGAATCCATTCCCAGTTTTAATGCTTTTCCAGTTCAAACGTGATATGCATGTATGTGTCTCTTTCTAACCCTTCGAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550021.1
CDS CCA 90 bp TCTAATCTATTATCTCTATTATCTGGCCGAGGCAGGCCTTTATCTTaGTTGTTTTCTGAATGGGGTAGACCAATACCCACAGGTTTAAAA +
Preference number: 5 (lower is better)
Translates to: SNLLSLLSGRGRPLS*LFSEWGRPIPTGLK
Trigger: TTTTAAACCTGTGGGTATTGGTCTACCCCATTCAGAAAACAACCAAGATAAAGGCCTGCCTCGGCCAGATAATAGAGATAATAGATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS-3UTR CAA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTATTCAGTTGGTTGGTaGATCCCTGAAGCAACCTCT +
Preference number: 5 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIYSVGW*IPEATS
Trigger: AGAGGTTGCTTCAGGGATCAACCAACCAACTGAATA...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS TCA 90 bp CAGTGTGAAAACTGCAAGAACTTTTCCTCATACACTGGGTATATATaGCAGGAGTTACAGTTGCAACATGGAATTTCAGAAGAGCATGTA +
Preference number: 5 (lower is better)
Translates to: QCENCKNFSSYTGYI*QELQLQHGISEEHV
Trigger: TACATGCTCTTCTGAAATTCCATGTTGCAACTGTAACTCCTGTCATATATACCCAGTGTATGAGGAAAAGTTCTTGCAGTTTTCACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS CCA 90 bp TTCCTCATACACTGGGTATATATGACAGGAGTTACAGTTGCAACATaGAATTTCAGAAGAGCATGTATTTCTAGTCTGAGCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: FLIHWVYMTGVTVAT*NFRRACISSLSTLF
Trigger: AAAAAGGGTGCTCAGACTAGAAATACATGCTCTTCTGAAATTCCATGTTGCAACTGTAACTCCTGTCATATATACCCAGTGTATGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS-3UTR CAA 90 bp AGTAGAAACAAAACAAGAACTGAAACGTGGAAGCAAGGTGACACACAAAGAAGCTCATCCAGAGTCTTTTaGAAAGTTTTGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SRNKTRTETWKQGDTQRSSSRVF*KVLNML
Trigger: CAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGA...GCTTCTTTGTGTGTCACCTTGCTTCCACGTTTCAGTTCTTGTTTTGTTTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS-3UTR CAA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCCACGTCTTTTCTTTCTaGTGGGTCTCTTTGGAAATG +
Preference number: 5 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIHVFSF*WVSLEM
Trigger: CATTTCCAAAGAGACCCACAAGAAAGAAAAGACGTG...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp TTCAATTCATTCCACAATTCAAAGTTGCTAATAAACTGCTCCCTGACCTACATCTACACCAACCTGTATTaGACATCTAAGACACCACAC +
Preference number: 5 (lower is better)
Translates to: FNSFHNSKLLINCSLTYIYTNLY*TSKTPH
Trigger: GTGTGGTGTCTTAGATGTCAAATACAGGTTGGTGTA...GATGTAGGTCAGGGAGCAGTTTATTAGCAACTTTGAATTGTGGAATGAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554107.2
CDS-3UTR CAA 90 bp GTACACAGAAACTTTAAACTCACACTATGTAAGCCTCTAATCAGCCTGAGCAAATGCTATGACATTACTTaGACGATCAAAATAAGGCTC +
Preference number: 5 (lower is better)
Translates to: VHRNFKLTLCKPLISLSKCYDIT*TIKIRL
Trigger: GAGCCTTATTTTGATCGTCAAAGTAATGTCATAGCA...TTTGCTCAGGCTGATTAGAGGCTTACATAGTGTGAGTTTAAAGTTTCTGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS-3UTR CAA 90 bp CTTAGCACTCTGTTAAAACTTTCTCTTAACACCACATTAGAGGGTTCTTTTGGTTCATCCAGAGTCTTTTaGAAAGTTTTGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: LSTLLKLSLNTTLEGSFGSSRVF*KVLNML
Trigger: CAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGA...ACCAAAAGAACCCTCTAATGTGGTGTTAAGAGAAAGTTTTAACAGAGTGCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS CCA 72 bp ATAGCTGAGGGCCGGCCCGGGTGGCGGGGGCATCGGTaGCGGTGGCGGCTGCCAGTCTCCGTAGCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: IAEGRPGWRGHR*RWRLPVSVAAP
Trigger: GGGGGCGGCTACGGAGACTGGCAGCCGCCACCGCCACCGATGCCCCCGCCACCCGGGCCGGCCCTCAGCTAT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp GCGGCGGCGGTGGGACCGGTGGCGGCGGATAGTGGCTaGTCCCGCCATACCGGCCCCAATTCGGGTACATAT +
Preference number: 6 (lower is better)
Translates to: AAAVGPVAADSG*SRHTGPNSGTY
Trigger: ATATGTACCCGAATTGGGGCCGGTATGGCGGGAGCAGCCACTATCCGCCGCCACCGGTCCCACCGCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp TACTCCCAGCCCTTCGAAGAGGTCCCCTCTCCTGACTaGCAGCCCTCCGAGGTGGTCCCCTTTCTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: YSQPFEEVPSPD*QPSEVVPFLGC
Trigger: GCAGCCGAGAAAGGGGACCACCTCGGAGGGCTGGCAGTCAGGAGAGGGGACCTCTTCGAAGGGCTGGGAGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp AGAAGGTGGCATAACAGGTGGGGGCATGCCAGGTGGTaGCACTGTAGCAGGGAGGGCAGGGGGCATCACTGG +
Preference number: 6 (lower is better)
Translates to: RRWHNRWGHARW*HCSREGRGHHW
Trigger: CCAGTGATGCCCCCTGCCCTCCCTGCTACAGTGCCACCACCTGGCATGCCCCCACCTGTTATGCCACCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp GGGTACATATCGAAAAAGAAGGCGCAGGGCTCGTCCTaGCGCCGTTACTCGTCGCAACCGACCTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GYISKKKAQGSS*RRYSSQPTSRS
Trigger: GCTCCTGGAGGTCGGTTGCGACGAGTAACGGCGCCAGGACGAGCCCTGCGCCTTCTTTTTCGATATGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp ACGCACTGCATTTGCTTCTGGTGCATCTGCTGCAGCTaGTGGAGCTGCGCCAAGTGCTGTTCGCGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: THCICFWCICCS*WSCAKCCSRKL
Trigger: GAGCTTCCGCGAACAGCACTTGGCGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCAGTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp GACCAAAATCTGATCTTCCCAGTCCCCTTTCTCGACTaGCAGGCCCTCGAGGTGGTCCTCTCTCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: DQNLIFPVPFLD*QALEVVLSPCS
Trigger: GGAGCAGGGAGAGAGGACCACCTCGAGGGCCTGGCAGTCGAGAAAGGGGACTGGGAAGATCAGATTTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp CTGGAGGAGGAGGAGGTAGAGGTGGAGGAGGTGGAGGTGGTGGTATaGGGACAGGTGGCCTGGTCACAGGAACAGATGATCTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LEEEEVEVEEVEVVV*GQVAWSQEQMILLV
Trigger: CACCAGCAAGATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCACCACCTCCACCTCCTCCACCTCTACCTCCTCCTCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 72 bp GAACTGGAGGCTGGTGGAACTGGGGCTGCTGTTAACTaGGGAGGTATCCCTTGTGGAACTCCAGGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: ELEAGGTGAAVN*GGIPCGTPGGG
Trigger: ACCTCCCCCTGGAGTTCCACAAGGGATACCTCCTCAGTTAACAGCAGCCCCAGTTCCACCAGCCTCCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp TGCTGCTGGTGCTGCTGCCAGTGTGCTGCTGCAGCCTaGAACTGCTTTAACCTGGCATCTTCTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: CCWCCCQCAAAA*NCFNLASSSGS
Trigger: GGACCCAGAAGAAGATGCCAGGTTAAAGCAGTTGCAGGCTGCAGCAGCACACTGGCAGCAGCACCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 72 bp CACTGCATTTGCTTCTGGTGCATCTGCTGCAGCTGCTaGAGCTGCGCCAAGTGCTGTTCGCGGAAGCTCATG +
Preference number: 6 (lower is better)
Translates to: HCICFWCICCSC*SCAKCCSRKLM
Trigger: CATGAGCTTCCGCGAACAGCACTTGGCGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 72 bp AGTGCCCTCTGCTGGGTGACCTTCATATCTGGGTCTTaGCCCATCGGGGCGATTTCCTTCAAAACGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SALCWVTFISGS*PIGAISFKTRP
Trigger: GGGCCTCGTTTTGAAGGAAATCGCCCCGATGGGCCAAGACCCAGATATGAAGGTCACCCAGCAGAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp GAGGAGGTGGAGGTGGTGGTATTGGGACAGGTGGCCTaGTCACAGGAACAGATGATCTTGCTGGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: EEVEVVVLGQVA*SQEQMILLVEQ
Trigger: CTGCTCCACCAGCAAGATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCACCACCTCCACCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp AGCTCCATTGGAACCAAACCAGGAGGCCCGTCTCGTTaGTGGTGGAGCATCTGGTGTTTGTACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSIGTKPGGPSR*WWSIWCLYCCC
Trigger: GCAGCAGCAGTACAAACACCAGATGCTCCACCACCAACGAGACGGGCCTCCTGGTTTGGTTCCAATGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 72 bp CTGCTGCTGTTCCTGTGGAGTCATCGTAGAGGGATCTaGCTCAGGGGCGGCTTGCTGCTGTTCAGTACTCTT +
Preference number: 6 (lower is better)
Translates to: LLLFLWSHRRGI*LRGGLLLFSTL
Trigger: AAGAGTACTGAACAGCAGCAAGCCGCCCCTGAGCCAGATCCCTCTACGATGACTCCACAGGAACAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 72 bp CAGCTCCATTGGAACCAAACCAGGAGGCCCGTCTCGTaGGTGGTGGAGCATCTGGTGTTTGTACTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QLHWNQTRRPVS*VVEHLVFVLLL
Trigger: CAGCAGCAGTACAAACACCAGATGCTCCACCACCAACGAGACGGGCCTCCTGGTTTGGTTCCAATGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 72 bp GGCCCATCGGGGCGATTTCCTTCAAAACGAGGCCCTTaGGGTCTCGGTCCTTCACACCTTGACCCTAAATCC +
Preference number: 6 (lower is better)
Translates to: GPSGRFPSKRGP*GLGPSHLDPKS
Trigger: GGATTTAGGGTCAAGGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGAAGGAAATCGCCCCGATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp GGGGGATTCCAGCTCCATTGGAACCAAACCAGGAGGCCCGTCTCGTaGGTGGTGGAGCATCTGGTGTTTGTACTGCTGCTGCTTCTGATA +
Preference number: 6 (lower is better)
Translates to: GGFQLHWNQTRRPVS*VVEHLVFVLLLLLI
Trigger: TATCAGAAGCAGCAGCAGTACAAACACCAGATGCTCCACCACCAACGAGACGGGCCTCCTGGTTTGGTTCCAATGGAGCTGGAATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 90 bp GATCTTGCTGGTGGAGCAGAGGGTCTTACAATTGAACCTGGTGGTTaGCCCATAGGAGGGGGAGGTCTATACGACCCTGGAGGCGGATAC +
Preference number: 6 (lower is better)
Translates to: DLAGGAEGLTIEPGG*PIGGGGLYDPGGGY
Trigger: GTATCCGCCTCCAGGGTCGTATAGACCTCCCCCTCCTATGGGCAAACCACCAGGTTCAATTGTAAGACCCTCTGCTCCACCAGCAAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 72 bp GGCCACCTGATCTCACTGGCATGTCCTTCACTGCAGTaGTTGGCTGAGATGGAGCAGCTGAAGACTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GHLISLACPSLQ*LAEMEQLKTPQ
Trigger: TTGGGGAGTCTTCAGCTGCTCCATCTCAGCCAATCACTGCAGTGAAGGACATGCCAGTGAGATCAGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 72 bp CAATCATCCCACCAAGGGCCTCGCCTATCTCCATCATaGGACCGAGATGGTGGTGCTGAGAACCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: QSSHQGPRLSPS*DRDGGAENLSS
Trigger: AGAGGACAGGTTCTCAGCACCACCATCTCGGTCTCATGATGGAGATAGGCGAGGCCCTTGGTGGGATGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp GCCCATCGGGGCGATTTCCTTCAAAACGAGGCCCTTTaGGTCTCGGTCCTTCACACCTTGACCCTAAATCCT +
Preference number: 6 (lower is better)
Translates to: AHRGDFLQNEAL*VSVLHTLTLNP
Trigger: AGGATTTAGGGTCAAGGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGAAGGAAATCGCCCCGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp GGGAATCATTCCCCACTTGCTTTTAGTGCCCTCTGCTaGGTGACCTTCATATCTGGGTCTTGGCCCATCGGG +
Preference number: 6 (lower is better)
Translates to: GNHSPLAFSALC*VTFISGSWPIG
Trigger: CCCGATGGGCCAAGACCCAGATATGAAGGTCACCCAGCAGAGGGCACTAAAAGCAAGTGGGGAATGATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp GGTGGAGCAGAGGGTCTTACAATTGAACCTGGTGGTTaGCCCATAGGAGGGGGAGGTCTATACGACCCTGGA +
Preference number: 6 (lower is better)
Translates to: GGAEGLTIEPGG*PIGGGGLYDPG
Trigger: TCCAGGGTCGTATAGACCTCCCCCTCCTATGGGCAAACCACCAGGTTCAATTGTAAGACCCTCTGCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp GAGAGGAGGTGGCACTTCCTCATTTGGAGGTGGCAATaGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTTG +
Preference number: 6 (lower is better)
Translates to: ERRWHFLIWRWQ*GLLRRRRFWNL
Trigger: CAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCTCCAAATGAGGAAGTGCCACCTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 72 bp TCTTGCTTGACCAATCCTGGGCCTCGACTGATTGCCTaGCCGCGACCTCTGTTTACTAGACCTTTATCCCGT +
Preference number: 6 (lower is better)
Translates to: SCLTNPGPRLIA*PRPLFTRPLSR
Trigger: ACGGGATAAAGGTCTAGTAAACAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp CATCTTATCCCGAAAGTCTTCTTGCTTGACCAATCCTaGGCCTCGACTGATTGCCTGGCCGCGACCTCTGTT +
Preference number: 6 (lower is better)
Translates to: HLIPKVFLLDQS*ASTDCLAATSV
Trigger: AACAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp CTGGGTCTTGGCCCATCGGGGCGATTTCCTTCAAAACGAGGCCCTTaGGGTCTCGGTCCTTCACACCTTGACCCTAAATCCTCAAATCTT +
Preference number: 6 (lower is better)
Translates to: LGLGPSGRFPSKRGP*GLGPSHLDPKSSNL
Trigger: AAGATTTGAGGATTTAGGGTCAAGGTGTGAAGGACCGAGACCCAAAGGGCCTCGTTTTGAAGGAAATCGCCCCGATGGGCCAAGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp GTGGTGGTATTGGGACAGGTGGCCTGGTCACAGGAACAGATGATCTaGCTGGTGGAGCAGAGGGTCTTACAATTGAACCTGGTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: VVVLGQVAWSQEQMI*LVEQRVLQLNLVVC
Trigger: GCAAACCACCAGGTTCAATTGTAAGACCCTCTGCTCCACCAGCAAGATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAATACCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 72 bp TTCTGGTCTGAATGGACCTCTATCACGACCAAAATCTaGTCTTCCCAGTCCCCTTTCTCGACTGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: FWSEWTSITTKI*SSQSPFSTARP
Trigger: GGGCCTGGCAGTCGAGAAAGGGGACTGGGAAGATCAGATTTTGGTCGTGATAGAGGTCCATTCAGACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS TCA 72 bp CCGGCCCGGTGGTTTCAAAATATCGTCCACATTCTTTaGTTCAGGCTTCTTCTCGACTCGTGGAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PARWFQNIVHIL*FRLLLDSWSWR
Trigger: CCTCCAGCTCCACGAGTCGAGAAGAAGCCTGAATCAAAGAATGTGGACGATATTTTGAAACCACCGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp TGGGGCAGAACCAAAAGACACAGGAGTAGGAAGCAGTaGTGGTCTAGGTTTCTCTGGAACTTGCGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: WGRTKRHRSRKQ*WSRFLWNLRAL
Trigger: CAGAGCTCGCAAGTTCCAGAGAAACCTAGACCAGCACTGCTTCCTACTCCTGTGTCTTTTGGTTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp GCCATGGCCATAATCAACAGTCTGTTGTACTGGTGGTaGCTTGGACATTGGTGGCATACCCATAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: AMAIINSLLYWW*LGHWWHTHRHW
Trigger: CCAGTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp TCGGCCATGGCCATAATCAACAGTCTGTTGTACTGGTaGTGGCTTGGACATTGGTGGCATACCCATAGGCAC +
Preference number: 6 (lower is better)
Translates to: SAMAIINSLLYW*WLGHWWHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS CAA 72 bp CTTCTACCCATCATCTTATCCCGAAAGTCTTCTTGCTaGACCAATCCTGGGCCTCGACTGATTGCCTGGCCG +
Preference number: 6 (lower is better)
Translates to: LLPIILSRKSSC*TNPGPRLIAWP
Trigger: CGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp TTGGGACAGGTGGCCTGGTCACAGGAACAGATGATCTaGCTGGTGGAGCAGAGGGTCTTACAATTGAACCTG +
Preference number: 6 (lower is better)
Translates to: LGQVAWSQEQMI*LVEQRVLQLNL
Trigger: CAGGTTCAATTGTAAGACCCTCTGCTCCACCAGCAAGATCATCTGTTCCTGTGACCAGGCCACCTGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CAA 90 bp TGGAGGTGGCAATGGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTaGACTGGTGGCAGGTACTGTAACTTCTTCTTTTACCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: WRWQWGLLRRRRFWN*TGGRYCNFFFYRLW
Trigger: CCAGAGCCGGTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 90 bp CTATCTTCTCTTCTACCCATCATCTTATCCCGAAAGTCTTCTTGCTaGACCAATCCTGGGCCTCGACTGATTGCCTGGCCGCGACCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSLLPIILSRKSSC*TNPGPRLIAWPRPL
Trigger: CAGAGGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAGAGAAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp TCGACTATCTTCTCTTCTACCCATCATCTTATCCCGAAAGTCTTCTaGCTTGACCAATCCTGGGCCTCGACTGATTGCCTGGCCGCGACC +
Preference number: 6 (lower is better)
Translates to: STIFSSTHHLIPKVF*LDQSWASTDCLAAT
Trigger: GGTCGCGGCCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAGAGAAGATAGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS TCA 72 bp GTAACTACTTCTAGGAGGATCTGGAAGCAGGCCACCTaGTCTCACTGGCATGTCCTTCACTGCAGTGATTGG +
Preference number: 6 (lower is better)
Translates to: VTTSRRIWKQAT*SHWHVLHCSDW
Trigger: CCAATCACTGCAGTGAAGGACATGCCAGTGAGATCAGGTGGCCTGCTTCCAGATCCTCCTAGAAGTAGTTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp AGGTGGCAATGGGGGCTCCTCAGAAGAAGGAGATTCTaGAACTTGACTGGTGGCAGGTACTGTAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: RWQWGLLRRRRF*NLTGGRYCNFF
Trigger: GAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTGCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CCA 72 bp CTGAGGAATGATGTGAGGAGGGCATATGTTCCGCCATaGGGGAATGTCTATCCACATCAGATGGGTACCATC +
Preference number: 6 (lower is better)
Translates to: LRNDVRRAYVPP*GNVYPHQMGTI
Trigger: GATGGTACCCATCTGATGTGGATAGACATTCCCCCATGGCGGAACATATGCCCTCCTCACATCATTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp TCGTTCTCCTCCAAACATGGATGGTCCTTCATAGACTaGTCGGTCAGACTTCCGGTCATAGGATGGCCTATC +
Preference number: 6 (lower is better)
Translates to: SFSSKHGWSFID*SVRLPVIGWPI
Trigger: GATAGGCCATCCTATGACCGGAAGTCTGACCGACCAGTCTATGAAGGACCATCCATGTTTGGAGGAGAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS CAA 72 bp CCATTACCCCTCCAAGGCCTTGGTCAGAGTCTAAGCTaGCATCGGACCCCATCATTTCTGAGGAATGATGTG +
Preference number: 6 (lower is better)
Translates to: PLPLQGLGQSLS*HRTPSFLRNDV
Trigger: CACATCATTCCTCAGAAATGATGGGGTCCGATGCAAGCTTAGACTCTGACCAAGGCCTTGGAGGGGTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp GAGGGCTCTGGCACCAGTGCTTCCCAACCTCACGTCTTTTCTTTCTaGTGGGTCTCTTTGGAAATGCAGGTTCCAGATTGCTTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: EGSGTSASQPHVFSF*WVSLEMQVPDCFLE
Trigger: TTCCAAGAAGCAATCTGGAACCTGCATTTCCAAAGAGACCCACAAGAAAGAAAAGACGTGAGGTTGGGAAGCACTGGTGCCAGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553381.1
ENST00000554107.2
CDS GCA 72 bp TCTCTTCTACCCATCATCTTATCCCGAAAGTCTTCTTaGTTGACCAATCCTGGGCCTCGACTGATTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SLLPIILSRKSS*LTNPGPRLIAW
Trigger: CCAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS TCA 72 bp GGAATGTCTATCCACATCAGATGGGTACCATCTGTCTaGCAACCGTTCTCTTTCCCAGTCCATTCTGTCAGG +
Preference number: 6 (lower is better)
Translates to: GMSIHIRWVPSV*QPFSFPVHSVR
Trigger: CCTGACAGAATGGACTGGGAAAGAGAACGGTTGTCAGACAGATGGTACCCATCTGATGTGGATAGACATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS TCA 72 bp CCAGGTCTTGAAGATGTATTCTGCAATCTTGATTCCTaGGGTGGTAGATGGTCAGCCATCTGTGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PGLEDVFCNLDS*GGRWSAICGSD
Trigger: GTCTGAGCCACAGATGGCTGACCATCTACCACCTCAGGAATCAAGATTGCAGAATACATCTTCAAGACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CCA 72 bp GGTGGCAGGTACTGTAACTTCTTCTTTTACCGGCTCTaGTGTATCCTTTGCTACCACAGGACCCTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: GGRYCNFFFYRL*CILCYHRTLFV
Trigger: CACAAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGCCGGTAAAAGAAGAAGTTACAGTACCTGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 72 bp TTCTCTTCTACCCATCATCTTATCCCGAAAGTCTTCTaGCTTGACCAATCCTGGGCCTCGACTGATTGCCTG +
Preference number: 6 (lower is better)
Translates to: FSSTHHLIPKVF*LDQSWASTDCL
Trigger: CAGGCAATCAGTCGAGGCCCAGGATTGGTCAAGCAAGAAGACTTTCGGGATAAGATGATGGGTAGAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp ATTCGCAAGGGGTACAGGCTGAGTAACAGCTTGGGCTTTGTCGATTaGAGTCTCCATACTTTGAACATTCTGGTCCCAATTAGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: IRKGYRLSNSLGFVD*SLHTLNILVPIRGL
Trigger: GAGCCCTCTAATTGGGACCAGAATGTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAAGCTGTTACTCAGCCTGTACCCCTTGCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp AGCAGGTACAGGCTTATTCGCAAGGGGTACAGGCTGAGTAACAGCTaGGGCTTTGTCGATTTGAGTCTCCATACTTTGAACATTCTGGTC +
Preference number: 6 (lower is better)
Translates to: SRYRLIRKGYRLSNS*GFVDLSLHTLNILV
Trigger: GACCAGAATGTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAAGCTGTTACTCAGCCTGTACCCCTTGCGAATAAGCCTGTACCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 90 bp TTTATTAGTGGATATATCTCGGCCATGGCCATAATCAACAGTCTGTaGTACTGGTGGTGGCTTGGACATTGGTGGCATACCCATAGGCAC +
Preference number: 6 (lower is better)
Translates to: FISGYISAMAIINSL*YWWWLGHWWHTHRH
Trigger: GTGCCTATGGGTATGCCACCAATGTCCAAGCCACCACCAGTACAACAGACTGTTGATTATGGCCATGGCCGAGATATATCCACTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325680.12
ENST00000547879.5
ENST00000549293.5
ENST00000552421.5
CDS CAA 90 bp ACCAGTGCTTCCCAACCTCACGTCTTTTCTTTCTTGTGGGTCTCTTaGGAAATGCAGGTTCCAGATTGCTTCTTGGAAATTGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: TSASQPHVFSFLWVS*EMQVPDCFLEIASL
Trigger: CAAGCTGGCAATTTCCAAGAAGCAATCTGGAACCTGCATTTCCAAAGAGACCCACAAGAAAGAAAAGACGTGAGGTTGGGAAGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553381.1
ENST00000554107.2
CDS TCA 72 bp AATGGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTTaGCTGGTGGCAGGTACTGTAACTTCTTCTTTTACC +
Preference number: 6 (lower is better)
Translates to: NGGSSEEGDSGT*LVAGTVTSSFT
Trigger: GGTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS TCA 72 bp GAAAGAATCTTCATCCCATCGTTCCTGTTCTACAGCTaGAGTTTGTGGCTTTATCACTGGAGGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: ERIFIPSFLFYS*SLWLYHWRRRR
Trigger: CCTCCTCCTCCTCCAGTGATAAAGCCACAAACTTCAGCTGTAGAACAGGAACGATGGGATGAAGATTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp ATTGGAGCATTTCTACCATCTAATGGAAACTCTTCATaGCCTCGCTCTTCTCCATGGTTCCATGGAGCCCTA +
Preference number: 6 (lower is better)
Translates to: IGAFLPSNGNSS*PRSSPWFHGAL
Trigger: TAGGGCTCCATGGAACCATGGAGAAGAGCGAGGGCATGAAGAGTTTCCATTAGATGGTAGAAATGCTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp ATAATCTCGCTTTTCCCGCCATGTATCTCCTCTTTCTaGATACTCTCGAATCCTCAACTCACCCCTATCACG +
Preference number: 6 (lower is better)
Translates to: IISLFPPCISSF*ILSNPQLTPIT
Trigger: CGTGATAGGGGTGAGTTGAGGATTCGAGAGTATCCAGAAAGAGGAGATACATGGCGGGAAAAGCGAGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp CAATGGGGGCTCCTCAGAAGAAGGAGATTCTGGAACTaGACTGGTGGCAGGTACTGTAACTTCTTCTTTTAC +
Preference number: 6 (lower is better)
Translates to: QWGLLRRRRFWN*TGGRYCNFFFY
Trigger: GTAAAAGAAGAAGTTACAGTACCTGCCACCAGTCAAGTTCCAGAATCTCCTTCTTCTGAGGAGCCCCCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 72 bp CTCTCGCTCCCATTCTTGGTAAAGATGTTGAAACTGTaGCTGCTGCATCTCATAATGCCGCAGCTGCATATC +
Preference number: 6 (lower is better)
Translates to: LSLPFLVKMLKL*LLHLIMPQLHI
Trigger: GATATGCAGCTGCGGCATTATGAGATGCAGCAGCAACAGTTTCAACATCTTTACCAAGAATGGGAGCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS CAA 72 bp AGGCTTATTCGCAAGGGGTACAGGCTGAGTAACAGCTaGGGCTTTGTCGATTTGAGTCTCCATACTTTGAAC +
Preference number: 6 (lower is better)
Translates to: RLIRKGYRLSNS*GFVDLSLHTLN
Trigger: GTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAAGCTGTTACTCAGCCTGTACCCCTTGCGAATAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp TCTCTATTATCTGGCCGAGGCAGGCCTTTATCTTGGTaGTTTTCTGAATGGGGTAGACCAATACCCACAGGT +
Preference number: 6 (lower is better)
Translates to: SLLSGRGRPLSW*FSEWGRPIPTG
Trigger: ACCTGTGGGTATTGGTCTACCCCATTCAGAAAACAACCAAGATAAAGGCCTGCCTCGGCCAGATAATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp GTCTATACGACCCTGGAGGCGGATACATTCCAGGTCTaGAAGATGTATTCTGCAATCTTGATTCCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: VYTTLEADTFQV*KMYSAILIPEV
Trigger: CACCTCAGGAATCAAGATTGCAGAATACATCTTCAAGACCTGGAATGTATCCGCCTCCAGGGTCGTATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp TGTAACTTCTTCTTTTACCGGCTCTGGTGTATCCTTTaGTACCACAGGACCCTTTTTGTGTCCTGGCAAATG +
Preference number: 6 (lower is better)
Translates to: CNFFFYRLWCIL*YHRTLFVSWQM
Trigger: CATTTGCCAGGACACAAAAAGGGTCCTGTGGTAGCAAAGGATACACCAGAGCCGGTAAAAGAAGAAGTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp TGTCTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCAGTTCGCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: CLALPQMCPSPI*FSECNPVRFPL
Trigger: AAGAGGAAAGCGAACTGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS GCA 72 bp TTCTTGTGGGTCTCTTTGGAAATGCAGGTTCCAGATTaGTTCTTGGAAATTGCCAGCTTGACGTTACAGGAG +
Preference number: 6 (lower is better)
Translates to: FLWVSLEMQVPD*FLEIASLTLQE
Trigger: CTCCTGTAACGTCAAGCTGGCAATTTCCAAGAAGCAATCTGGAACCTGCATTTCCAAAGAGACCCACAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553381.1
ENST00000554107.2
CDS CAA 72 bp GGGTACAGGCTGAGTAACAGCTTGGGCTTTGTCGATTaGAGTCTCCATACTTTGAACATTCTGGTCCCAATT +
Preference number: 6 (lower is better)
Translates to: GYRLSNSLGFVD*SLHTLNILVPI
Trigger: AATTGGGACCAGAATGTTCAAAGTATGGAGACTCAAATCGACAAAGCCCAAGCTGTTACTCAGCCTGTACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp CGTTTCCTTTTAGTACCAGTCCTCAAGCCATCCAACTaGTCAGTTCGCTTTCCTCTTCCTCTGCATCTTTCT +
Preference number: 6 (lower is better)
Translates to: RFLLVPVLKPSN*SVRFPLPLHLS
Trigger: AGAAAGATGCAGAGGAAGAGGAAAGCGAACTGACAAGTTGGATGGCTTGAGGACTGGTACTAAAAGGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549293.5
CDS CAA 90 bp ATGAGAATGAACTGTATGGCAGAGCAGACTTGCTCAAAGGAGCTTTaGAATTCACTTGTTCTGATGGACCAGCTGATTGCAACGGAGGAT +
Preference number: 6 (lower is better)
Translates to: MRMNCMAEQTCSKEL*NSLVLMDQLIATED
Trigger: ATCCTCCGTTGCAATCAGCTGGTCCATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATACAGTTCATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS TCA 72 bp TTTGCTACCACAGGACCCTTTTTGTGTCCTGGCAAATaGACTTTTGTCCTCTGTTGCAAACTAAGCAAGTGC +
Preference number: 6 (lower is better)
Translates to: FATTGPFLCPGK*TFVLCCKLSKC
Trigger: GCACTTGCTTAGTTTGCAACAGAGGACAAAAGTTCATTTGCCAGGACACAAAAAGGGTCCTGTGGTAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000552421.5
CDS TCA 72 bp AGGTGGAAGAGATGGAATATCCCGTTCACGAAACTGTaGTTCTTGTTCATCCAGTGGTCTCCCATAATCTCT +
Preference number: 6 (lower is better)
Translates to: RWKRWNIPFTKL*FLFIQWSPIIS
Trigger: AGAGATTATGGGAGACCACTGGATGAACAAGAATCACAGTTTCGTGAACGGGATATTCCATCTCTTCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS GCA 72 bp TGTCTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCTAAATCGTACACAGAG +
Preference number: 6 (lower is better)
Translates to: CLALPQMCPSPI*FSECNPKSYTE
Trigger: CTCTGTGTACGATTTAGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550021.1
CDS GCA 72 bp ATACTAGCTTTGCCTCAGATGTGTCCATCTCCCATTTaGTTTTCGGAATGTAACCCAGTTCGCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: ILALPQMCPSPI*FSECNPVRFPL
Trigger: AAGAGGAAAGCGAACTGGGTTACATTCCGAAAAGCAAATGGGAGATGGACACATCTGAGGCAAAGCTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS CCA 72 bp TTATCTCTATTATCTGGCCGAGGCAGGCCTTTATCTTaGTTGTTTTCTGAATGGGGTAGACCAATACCCACA +
Preference number: 6 (lower is better)
Translates to: LSLLSGRGRPLS*LFSEWGRPIPT
Trigger: TGTGGGTATTGGTCTACCCCATTCAGAAAACAACCAAGATAAAGGCCTGCCTCGGCCAGATAATAGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CAA 72 bp AACTGTATGGCAGAGCAGACTTGCTCAAAGGAGCTTTaGAATTCACTTGTTCTGATGGACCAGCTGATTGCA +
Preference number: 6 (lower is better)
Translates to: NCMAEQTCSKEL*NSLVLMDQLIA
Trigger: TGCAATCAGCTGGTCCATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS CAA 90 bp GTAGAGGTGGAGGCATCTGAGAATATGGAACAAAAGGAGGTGGCATaGACATGTTCCCCATATACTGGTTCTTCATGTTCTGAAATGAAT +
Preference number: 6 (lower is better)
Translates to: VEVEASENMEQKEVA*TCSPYTGSSCSEMN
Trigger: ATTCATTTCAGAACATGAAGAACCAGTATATGGGGAACATGTCAATGCCACCTCCTTTTGTTCCATATTCTCAGATGCCTCCACCTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp GATCAGATGAGAATGAACTGTATGGCAGAGCAGACTTaGTCAAAGGAGCTTTTGAATTCACTTGTTCTGATG +
Preference number: 6 (lower is better)
Translates to: DQMRMNCMAEQT*SKELLNSLVLM
Trigger: CATCAGAACAAGTGAATTCAAAAGCTCCTTTGAGCAAGTCTGCTCTGCCATACAGTTCATTCTCATCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325680.12
ENST00000549293.5
ENST00000552421.5
CDS GCA 72 bp TGGTCTGTCTCCTACCAGTTCGCTTTCCTCTTCCTCTaGATCTTTCTTTTCTTCTTTCTGTTCTTCGATATT +
Preference number: 6 (lower is better)
Translates to: WSVSYQFAFLFL*IFLFFFLFFDI
Trigger: AATATCGAAGAACAGAAAGAAGAAAAGAAAGATGCAGAGGAAGAGGAAAGCGAACTGGTAGGAGACAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS TCA 72 bp ATTATCCAAACTTCTATCATACATATCCATAGGTCTTaGAATCCGATCCACATCCCTGTCCATGTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: IIQTSIIHIHRS*NPIHIPVHVPF
Trigger: GAAAGGGACATGGACAGGGATGTGGATCGGATTTCAAGACCTATGGATATGTATGATAGAAGTTTGGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325680.12
ENST00000549293.5
CDS CCA 72 bp CACTGGGTATATATGACAGGAGTTACAGTTGCAACATaGAATTTCAGAAGAGCATGTATTTCTAGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: HWVYMTGVTVAT*NFRRACISSLS
Trigger: GCTCAGACTAGAAATACATGCTCTTCTGAAATTCCATGTTGCAACTGTAACTCCTGTCATATATACCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS CAA 90 bp AAACCTTCTTTAAGAATTTTAATAAAGAGACACTGTTCAAAGTGGTaGGTCTGTCTCCTACCAGTTCGCTTTCCTCTTCCTCTGCATCTT +
Preference number: 6 (lower is better)
Translates to: KPSLRILIKRHCSKW*VCLLPVRFPLPLHL
Trigger: AAGATGCAGAGGAAGAGGAAAGCGAACTGGTAGGAGACAGACCAACCACTTTGAACAGTGTCTCTTTATTAAAATTCTTAAAGAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547879.5
CDS CCA 72 bp AAGCCATATATTTTAAGTCACAAAGAGAAAACTCTCTaGACAATCCAAGTCCTAACCATTCCAGCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: KPYILSHKEKTL*TIQVLTIPAPE
Trigger: TTCAGGAGCTGGAATGGTTAGGACTTGGATTGTCCAGAGAGTTTTCTCTTTGTGACTTAAAATATATGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549197.1
CDS TCA 72 bp AGGGTTAGAAAGAGACACATACATGCATATCACGTTTaGACTGGAAAAGCATTAAAACTGGGAATGGATTCA +
Preference number: 6 (lower is better)
Translates to: RVRKRHIHAYHV*TGKALKLGMDS
Trigger: TGAATCCATTCCCAGTTTTAATGCTTTTCCAGTTCAAACGTGATATGCATGTATGTGTCTCTTTCTAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550021.1
CDS TCA 72 bp AACTGCAAGAACTTTTCCTCATACACTGGGTATATATaGCAGGAGTTACAGTTGCAACATGGAATTTCAGAA +
Preference number: 6 (lower is better)
Translates to: NCKNFSSYTGYI*QELQLQHGISE
Trigger: TTCTGAAATTCCATGTTGCAACTGTAACTCCTGTCATATATACCCAGTGTATGAGGAAAAGTTCTTGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546901.1
CDS CAA 90 bp ACTAGCTGTAAATACATCCTTAGGGGAAACACAATCTCATTATCTTaGAAGAAACTAAATGACCAAATTCACCAAACTTCACTGTCCACA +
Preference number: 6 (lower is better)
Translates to: TSCKYILRGNTISLS*KKLNDQIHQTSLST
Trigger: TGTGGACAGTGAAGTTTGGTGAATTTGGTCATTTAGTTTCTTCAAAGATAATGAGATTGTGTTTCCCCTAAGGATGTATTTACAGCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550021.1