RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YJEFN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000250067

Ensembl transcript IDs: ENST00000436027.9, ENST00000458210.7, ENST00000514277.6

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCCCGTCCT +
Preference number: 1 (lower is better)
Translates to: RPRSGGARRSGQRSA*APRETPARQAAARP
Trigger: AGGACGGGCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp GCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTCGGTaGCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGT +
Preference number: 1 (lower is better)
Translates to: AVWPRVAVTVPRRSR*PCIPAGAERTCGAR
Trigger: ACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp TTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTaGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTGGGCGCCGCGAGA +
Preference number: 1 (lower is better)
Translates to: LRRTSSGTNLPATKW*RPEKRPAQRLGAAR
Trigger: TCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp AACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTaGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTGGGCGCCGCG +
Preference number: 1 (lower is better)
Translates to: NLRRTSSGTNLPATK*WRPEKRPAQRLGAA
Trigger: CGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp GCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCTaGCGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGC +
Preference number: 1 (lower is better)
Translates to: AGAERTCGARHRART*RPRSGGARRSGQRS
Trigger: GCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp TATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTaGCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGC +
Preference number: 1 (lower is better)
Translates to: YWRGSLRCGRGWRSQ*RDAVGARVSRQAQS
Trigger: GCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp GGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTaGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGG +
Preference number: 1 (lower is better)
Translates to: GRAVYWRGSLRCGRG*RSQCRDAVGARVSR
Trigger: CCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp CGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTaGGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGT +
Preference number: 1 (lower is better)
Translates to: RRSRCPCIPAGAERT*GARHRARTCRPRSG
Trigger: ACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp ACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTaGAGACATTCTTCCACCTTTCTCACCGCGGGCCCACCCCCGCCC +
Preference number: 1 (lower is better)
Translates to: TARRPECGLFILRLS*RHSSTFLTAGPPPP
Trigger: GGGCGGGGGTGGGCCCGCGGTGAGAAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 90 bp CAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTaGGTTGCAGACATTCTTCCACCTTTCTCACCGCGGGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: QPLPVARSAVCLFSA*VADILPPFSPRAHP
Trigger: GGGGTGGGCCCGCGGTGAGAAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp CAGAGGCCCGGTCTCAGGCTCTGCCAGGTCGGTGCAGGAAAAACGTaGATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTC +
Preference number: 1 (lower is better)
Translates to: QRPGLRLCQVGAGKT*IQPLPVARSAVCLF
Trigger: GAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCACCGACCTGGCAGAGCCTGAGACCGGGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp CGCACTGGGTGGTCAGGTCCCGATGCAGCAGGTCCAGCGAGCGTGTaGGGTAGAAGATGGTGGGTTCATACTCAAACACCCGCAGGTGCC +
Preference number: 1 (lower is better)
Translates to: RTGWSGPDAAGPASV*GRRWWVHTQTPAGA
Trigger: GGCACCTGCGGGTGTTTGAGTATGAACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGCATCGGGACCTGACCACCCAGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp TCCCCTTTCAAGTATCCTCCCCAAAGGCTTAGCGCAGTCCTGACCTaGCATGAACATGCCTGCGATCCCAGCCACACCGGGCCCAGAGCC +
Preference number: 1 (lower is better)
Translates to: SPFKYPPQRLSAVLT*HEHACDPSHTGPRA
Trigger: GGCTCTGGGCCCGGTGTGGCTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCCTTTGGGGAGGATACTTGAAAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp TCAGGCTCTGCCAGGTCGGTGCAGGAAAAACGTGCATCCAGCCACTaGCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTG +
Preference number: 1 (lower is better)
Translates to: SGSARSVQEKRASSH*PSPGVRFVYSPPEL
Trigger: CAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCACCGACCTGGCAGAGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 90 bp ATTACTCCCCTTTCAAGTATCCTCCCCAAAGGCTTAGCGCAGTCCTaGCCTGCCATGAACATGCCTGCGATCCCAGCCACACCGGGCCCA +
Preference number: 1 (lower is better)
Translates to: ITPLSSILPKGLAQS*PAMNMPAIPATPGP
Trigger: TGGGCCCGGTGTGGCTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCCTTTGGGGAGGATACTTGAAAGGGGAGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 90 bp CGGTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTaGGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACC +
Preference number: 1 (lower is better)
Translates to: RCRKNVHPATARRPE*GLFILRLSCRHSST
Trigger: GGTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp GGCAGGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATaGGACAGTTTTCTGAGGCGTTCACGTTTAGGGACTGACTCGTCA +
Preference number: 1 (lower is better)
Translates to: GRGGRGGSHARASTV*DSFLRRSRLGTDSS
Trigger: TGACGAGTCAGTCCCTAAACGTGAACGCCTCAGAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp AGCCCAACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTaGCTGTCTCTGTGTCTCTCTGTATCTCTCAGACTCTCCGTGTCT +
Preference number: 1 (lower is better)
Translates to: SPTLATMPWGLSVSL*LSLCLSVSLRLSVS
Trigger: AGACACGGAGAGTCTGAGAGATACAGAGAGACACAGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGTTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 90 bp GGCTTCTGGACAGACAAGGGGCTTTCAGTGCAAAAACCAGACAGTTaGCCACTGAGCGCCAGGCGAGTAGTGACTACTGGGTTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: GFWTDKGLSVQKPDS*PLSARRVVTTGFLS
Trigger: AGAAAGAAACCCAGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGTCTGTCCAGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 90 bp CTCGACTGTATGGGACAGTTTTCTGAGGCGTTCACGTTTAGGGACTaGCTCGTCAGTACCATTTATTATGCTGTTGCAGAGGAAACTGAT +
Preference number: 1 (lower is better)
Translates to: LDCMGQFSEAFTFRD*LVSTIYYAVAEETD
Trigger: ATCAGTTTCCTCTGCAACAGCATAATAAATGGTACTGACGAGTCAGTCCCTAAACGTGAACGCCTCAGAAAACTGTCCCATACAGTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp CCGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTaGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCCCGTCC +
Preference number: 2 (lower is better)
Translates to: PATKWWRPEKRPAQR*GAARDTSTSGRSPS
Trigger: GGACGGGCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTCCCACTGCCCCGTTCTaGTCCGGGCCACACACGACC +
Preference number: 2 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSPTAPF*SGPHTT
Trigger: GGTCGTGTGTGGCCCGGAGCAGAACGGGGCAGTGGG...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSTSTVL*FRERAG
Trigger: GCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGT...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACCGTGCATCCAGCCACTaGCCGTCGCCCGGAGTGCGG +
Preference number: 2 (lower is better)
Translates to: DAVGARVSRQAQSELAAHRASSH*PSPGVR
Trigger: CCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACG...GTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCTTAGCCACGATGCCCTaGGGCCTCTCTGTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: SSLSVASARVQGPPTSPGLATMP*GLSVSL
Trigger: GAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAA...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp CGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCCCTCAGTTTCCCCGCTaGAGATGCAGAGGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: RPAQRLGAARDTSTSGRSPQFPR*RCRGPV
Trigger: GACCGGGCCTCTGCATCTCCAGCGGGGAAACTGAGG...GCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACCTGCCGGCCACGAAGTaGTGGCGCCCGGAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: DAVGARVSRQAQSELAAHLPATK*WRPEKR
Trigger: CCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAG...GTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp GCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTaGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGG +
Preference number: 2 (lower is better)
Translates to: ATQSVPVYPGRRRAN*RRTSSGTNLPATKW
Trigger: CCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp CGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCGATGCCCAGCACTGCTaGCTGCACGGTGAAGCACTC +
Preference number: 2 (lower is better)
Translates to: RPAQRLGAARDTSTSGRSDAQHC*LHGEAL
Trigger: GAGTGCTTCACCGTGCAGCCAGCAGTGCTGGGCATC...GCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCA +
Preference number: 2 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVAGQRSA*APRETP
Trigger: TGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCC...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGGCTTCTTTCCCCGCTGGAGATaGAGAGGCCCGGTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: ARLHAGAQYGIHHQPIGFFPRWR*RGPVSG
Trigger: GCCTGAGACCGGGCCTCTGCATCTCCAGCGGGGAAA...GAAGCCTATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGGCTTCCCCTCCTGGAGGCTGTaGAGTAGGGGAGCCCAACCT +
Preference number: 2 (lower is better)
Translates to: ARLHAGAQYGIHHQPIGFPSWRL*SRGAQP
Trigger: AGGTTGGGCTCCCCTACTCCACAGCCTCCAGGAGGG...GAAGCCTATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GACCTCGCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGCCCGTCGCCCGGAGTaGGGTTTGTTTATTCTCCGC +
Preference number: 2 (lower is better)
Translates to: DLARLHAGAQYGIHHQPIARRPE*GLFILR
Trigger: GCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC...TATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGCGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCCAAAAACCAGACAGTTaGCCACTGAGCGCCAGGCGA +
Preference number: 2 (lower is better)
Translates to: AAGGGHSAATQSVPVYPGQKPDS*PLSARR
Trigger: TCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTG...GCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp ACGAACCTGCCGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTCTGGATGAGGGGTTaGGCCTCTTGGGGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: TNLPATKWWRPEKRPAQRFWMRG*ASWGLS
Trigger: ACTGAGGCCCCAAGAGGCCCAACCCCTCATCCAGAA...GCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GTGGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCACCCAGCACTGCTGGCTaGACGGTGAAGCACTCCATA +
Preference number: 2 (lower is better)
Translates to: VAVTVPRRSRCPCIPAGAPSTAG*TVKHSI
Trigger: TATGGAGTGCTTCACCGTGCAGCCAGCAGTGCTGGG...TGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGGTGGTCAGGTCCCGATaGAGCAGGTCCAGCGAGCGT +
Preference number: 2 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVAVVRSR*SRSSER
Trigger: ACGCTCGCTGGACCTGCTGCATCGGGACCTGACCAC...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp TACTCAAACACCCGCAGGTGCCGGGCACAGACCAGCCCCACTGCCCCGTTCTGCGACAGTGCCACCGCCTaGCAGGCACTCTGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: YSNTRRCRAQTSPTAPFCDSATA*QALWVS
Trigger: AGACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTC...GCAGAACGGGGCAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTTTGGCCTTTATCAAATaGGATGACAGTGCCACCGCC +
Preference number: 2 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSLAFIK*DDSATA
Trigger: GGCGGTGGCACTGTCATCGCATTTGATAAAGGCCAA...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp CGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCAGAGCCTCGACTGTATaGGACAGTTTTCTGAGGCGT +
Preference number: 2 (lower is better)
Translates to: RPAQRLGAARDTSTSGRSRASTV*DSFLRR
Trigger: ACGCCTCAGAAAACTGTCCCATACAGTCGAGGCTCT...GCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp CGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGAACGCCTGGTAGTCCTGACCTGCCATaGACATGCCTGCGATCCCAG +
Preference number: 2 (lower is better)
Translates to: RPAPSSASGRERATGTPGSPDLP*TCLRSQ
Trigger: CTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACT...ACCAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp TGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCGGAGGTGAGCTGTTCTaGATGAGGGGTTGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: CIPAGAERTCGARHRARTGGELF*MRGWAS
Trigger: AGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCC...GGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GTGGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAACAAGGGGCTTTCAGTaGAAAAACCAGACAGTTGGC +
Preference number: 2 (lower is better)
Translates to: VAVTVPRRSRCPCIPAGATRGFQ*KNQTVG
Trigger: GCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGT...TGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCCCAGCCTGAGGGGATTCTCCGCCTGAGTTaGAGACATTCTTCCACCTTT +
Preference number: 2 (lower is better)
Translates to: GRSPSSESLPVSASQPEGILRLS*RHSSTF
Trigger: AAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAAT...CCCCTCAGGCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp CGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGCCTCCCAGACTCAGTTTaGCCTTTATCAAATGCGATG +
Preference number: 2 (lower is better)
Translates to: RHRARTCRPRSGGARRSGLPDSV*PLSNAM
Trigger: CATCGCATTTGATAAAGGCCAAACTGAGTCTGGGAG...GCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp GGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCCCAGCCTGAGGGGAAGCACTCCATAGTATaGTTATTGCTATCACCCTTG +
Preference number: 2 (lower is better)
Translates to: GRSPSSESLPVSASQPEGKHSIV*LLLSPL
Trigger: CAAGGGTGATAGCAATAATCATACTATGGAGTGCTT...CCCCTCAGGCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp GGGCCACACACGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGTGTTTATTCTCCGCCTaGGTTGCAGACATTCTTCCA +
Preference number: 2 (lower is better)
Translates to: GPHTTSTVLCFRERAGNGCLFSA*VADILP
Trigger: TGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACA...CCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp TGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCCTCCCCACCTGTCTCTaGCTGTTTCTGTATCTCTCA +
Preference number: 2 (lower is better)
Translates to: CIPAGAERTCGARHRARTLPTCL*LFLYLS
Trigger: TGAGAGATACAGAAACAGCCAGAGACAGGTGGGGAG...GGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp GTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTGTTGCAGAGGAAACTaGTGCCCAGCACTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: VQEKRASSHCPSPGVRFVCCRGN*CPALLA
Trigger: AGCCAGCAGTGCTGGGCATCAGTTTCCTCTGCAACA...AACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp ACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTGTGTGGCTTAGCGCAGTCCTaGCCTGCCATGAACATGCCT +
Preference number: 2 (lower is better)
Translates to: TLATMPWGLSVSLWLSLCGLAQS*PAMNMP
Trigger: AGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCC...ACACAGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp GGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATGGGACAGTTTTCACTGATGCCCAGCACTaGTGGCTGCACGGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: GEEEEAVTLEPRLYGTVFTDAQH*WLHGEA
Trigger: TGCTTCACCGTGCAGCCAGCAGTGCTGGGCATCAGT...GAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp CCACCGCCTGACAGGCACTCTGGGTGTCTCTTGAGCCCCAGCTGTACTTTAAGCAGCGCAGTCCTGACCTaGCATGAACATGCCTGCGAT +
Preference number: 2 (lower is better)
Translates to: PPPDRHSGCLLSPSCTLSSAVLT*HEHACD
Trigger: ATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCT...GCTTAAAGTACAGCTGGGGCTCAAGAGACACCCAGAGTGCCTGTCAGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp TCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACTGCCCTGATTCTGCGTaGCCCCAGCCCCTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SPGVRFVYSPPELQTFFHCPDSA*PQPLLS
Trigger: GGAGAGAAGGGGCTGGGGCCACGCAGAATCAGGGCA...GTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR GCA 90 bp TCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACTGCCATGAACATGCCTaGGATCCCAGCCACACCGGG +
Preference number: 2 (lower is better)
Translates to: SPGVRFVYSPPELQTFFHCHEHA*DPSHTG
Trigger: CCCGGTGTGGCTGGGATCGCAGGCATGTTCATGGCA...GTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp CCACCGCCTGACAGGCACTCTGGGTGTCTCTTGAGCCCCAGCTGTACTTTAAGCATTTTCCTTCTCCTTTaGGCGCCTCACCCGGGATCT +
Preference number: 2 (lower is better)
Translates to: PPPDRHSGCLLSPSCTLSIFLLL*APHPGS
Trigger: AGATCCCGGGTGAGGCGCCCAAAGGAGAAGGAAAAT...GCTTAAAGTACAGCTGGGGCTCAAGAGACACCCAGAGTGCCTGTCAGGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp AATGCGATGACAGTGCCACCGCCTGACAGGCACTCTGGGTGTCTCTaGAGCCCCAGCTGTACTTTAAGCTCCAACCACACAGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: NAMTVPPPDRHSGCL*SPSCTLSSNHTDSR
Trigger: TCTGCTGTCTGTGTGGTTGGAGCTTAAAGTACAGCTGGGGCTCAAGAGACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTCATCGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GAGCCCCAGCTGTACTTTAAGCTCCAACCACACAGACAGCAGATTACTCCCCTTGGGAGGGCTGTTTATTaGCGAGGGTCCCTGCGGTGT +
Preference number: 2 (lower is better)
Translates to: EPQLYFKLQPHRQQITPLGRAVY*RGSLRC
Trigger: ACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCC...AAGGGGAGTAATCTGCTGTCTGTGTGGTTGGAGCTTAAAGTACAGCTGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CCA 90 bp GTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTCTCTCCATCTGTCTCTaGCCATCTCTGTATCTCTCA +
Preference number: 2 (lower is better)
Translates to: VQEKRASSHCPSPGVRFVLSICL*PSLYLS
Trigger: TGAGAGATACAGAGATGGCCAGAGACAGATGGAGAG...AACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp GGGCTTCTGGACAGACAAGGGGCTTTCAGTGCAAAAACCAGACAGTaGGCCACTGAGCGCCAGGCGAGTAGTGACTACTGGGTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: GLLDRQGAFSAKTRQ*ATERQASSDYWVSF
Trigger: GAAAGAAACCCAGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGTCTGTCCAGAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp AGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTaGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RKNVHPATARRPECG*FILRLSCRHSSTFL
Trigger: GAGAAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp CTGAGCGCCAGGCGAGTAGTGACTACTGGGTTTCTTTCTGGGGTTTaGATTTTCCTTCTCCTTTGGGCGCCTCACCCGGGATCTATTTCA +
Preference number: 2 (lower is better)
Translates to: LSARRVVTTGFLSGV*IFLLLWAPHPGSIS
Trigger: TGAAATAGATCCCGGGTGAGGCGCCCAAAGGAGAAGGAAAATCAAAACCCCAGAAAGAAACCCAGTAGTCACTACTCGCCTGGCGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 90 bp CGTTCACGTTTAGGGACTGACTCGTCAGTACCATTTATTATGCTGTaGCAGAGGAAACTGATGCCCAGCACTGCTGGCTGCACGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RSRLGTDSSVPFIML*QRKLMPSTAGCTVK
Trigger: CTTCACCGTGCAGCCAGCAGTGCTGGGCATCAGTTTCCTCTGCAACAGCATAATAAATGGTACTGACGAGTCAGTCCCTAAACGTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR TCA 90 bp CAACAGGATAGGACAGGAGGTGAGCTGTTCTGGATGAGGGGTTGGGCCTCTTGGTTCACGTTTAGGGACTaGCTCGTCAGTACCATTTAT +
Preference number: 2 (lower is better)
Translates to: QQDRTGGELFWMRGWASWFTFRD*LVSTIY
Trigger: ATAAATGGTACTGACGAGTCAGTCCCTAAACGTGAA...CCAAGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCCTGTCCTATCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp GGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTaGCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: GSLRCGRGWRSQ*RDAVGARVSRQ
Trigger: CTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp AGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCA +
Preference number: 3 (lower is better)
Translates to: SGGARRSGQRSA*APRETPARQAA
Trigger: TGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp CCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTCGGTaGCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGC +
Preference number: 3 (lower is better)
Translates to: PRVAVTVPRRSR*PCIPAGAERTC
Trigger: GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp ACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTaGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTGGGC +
Preference number: 3 (lower is better)
Translates to: TSSGTNLPATKW*RPEKRPAQRLG
Trigger: GCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp CGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTaGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTG +
Preference number: 3 (lower is better)
Translates to: RTSSGTNLPATK*WRPEKRPAQRL
Trigger: CAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CAA 90 bp GACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGGGATGGACAGCAGCTaGAGCGTGGCCAGCGCGCGG +
Preference number: 3 (lower is better)
Translates to: DAVGARVSRQAQSELAAHGMDSS*SVASAR
Trigger: CCGCGCGCTGGCCACGCTCAAGCTGCTGTCCATCCC...GTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp GAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCTaGCGGCCACGAAGTGGTGGCGCCCGGAGAAGCGGC +
Preference number: 3 (lower is better)
Translates to: ERTCGARHRART*RPRSGGARRSG
Trigger: GCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp CGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTaGGGCGCACGTCATCGGGCACGAACCTGCCGGCCA +
Preference number: 3 (lower is better)
Translates to: RCPCIPAGAERT*GARHRARTCRP
Trigger: TGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp GTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTaGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGT +
Preference number: 3 (lower is better)
Translates to: VYWRGSLRCGRG*RSQCRDAVGAR
Trigger: ACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp CCAGCACGTCAGGCCGCAGCCCGTCCTCCGAATCGCTaGCGGTCTCTGCGTCCCAGCCTGAGGGGATGTCCA +
Preference number: 3 (lower is better)
Translates to: PARQAAARPPNR*RSLRPSLRGCP
Trigger: TGGACATCCCCTCAGGCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCCTGACGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp TGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTaGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGT +
Preference number: 3 (lower is better)
Translates to: WEGCLLARVPAV*PRVAVTVPRRS
Trigger: ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CAA 90 bp AAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACCGCCCGGAGTGCGGTTaGTTTATTCTCCGCCTGAGT +
Preference number: 3 (lower is better)
Translates to: KWWRPEKRPAQRLGAARDRPECG*FILRLS
Trigger: ACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCG...GTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp TTCTGCTCCGGGCCACACACGACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGCAACGGGAACGCCTGG +
Preference number: 3 (lower is better)
Translates to: FCSGPHTTSTVL*FRERAGNGNAW
Trigger: CCAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCCGGAGCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp TCCCCGCTGGAGATGCAGAGGCCCGGTCTCAGGCTCTaGCAGGTCGGTGCAGGAAAAACGTGCATCCAGCCA +
Preference number: 3 (lower is better)
Translates to: SPLEMQRPGLRL*QVGAGKTCIQP
Trigger: TGGCTGGATGCACGTTTTTCCTGCACCGACCTGGCAGAGCCTGAGACCGGGCCTCTGCATCTCCAGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 72 bp ACACCGGGCCCAGAGCCCAAGACCCAAGACTGGGACTaGGGGGCTTCTGGACAGACAAGGGGCTTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: TPGPEPKTQDWD*GASGQTRGFQC
Trigger: GCACTGAAAGCCCCTTGTCTGTCCAGAAGCCCCTCAGTCCCAGTCTTGGGTCTTGGGCTCTGGGCCCGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp GCAGCAGGTCCAGCGAGCGTGTGGGGTAGAAGATGGTaGGTTCATACTCAAACACCCGCAGGTGCCGGGCAC +
Preference number: 3 (lower is better)
Translates to: AAGPASVWGRRW*VHTQTPAGAGH
Trigger: GTGCCCGGCACCTGCGGGTGTTTGAGTATGAACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CAA 90 bp GTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCTATTCTCCGCCTGAGTaGCAGACATTCTTCCACCTT +
Preference number: 3 (lower is better)
Translates to: VPRRSRCPCIPAGAERTCYSPPE*QTFFHL
Trigger: AAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATA...GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp GCCAGGTCGGTGCAGGAAAAACGTGCATCCAGCCACTaGCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCG +
Preference number: 3 (lower is better)
Translates to: ARSVQEKRASSH*PSPGVRFVYSP
Trigger: CGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCACCGACCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp GATGCAGCAGGTCCAGCGAGCGTGTGGGGTAGAAGATaGTGGGTTCATACTCAAACACCCGCAGGTGCCGGG +
Preference number: 3 (lower is better)
Translates to: DAAGPASVWGRR*WVHTQTPAGAG
Trigger: CCCGGCACCTGCGGGTGTTTGAGTATGAACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CAA 90 bp GGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATGGGACAGTTTTCTGGGAGGGCTGTTTATaGGCGAGGGTCCCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: GEEEEAVTLEPRLYGTVFWEGCL*ARVPAV
Trigger: CACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCA...GAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp AAGTATCCTCCCCAAAGGCTTAGCGCAGTCCTGACCTaGCATGAACATGCCTGCGATCCCAGCCACACCGGG +
Preference number: 3 (lower is better)
Translates to: KYPPQRLSAVLT*HEHACDPSHTG
Trigger: CCCGGTGTGGCTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCCTTTGGGGAGGATACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 72 bp CCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTaGGTTGCAGACATTCTTCCACCTTTCTCACCGCGG +
Preference number: 3 (lower is better)
Translates to: PVARSAVCLFSA*VADILPPFSPR
Trigger: CCGCGGTGAGAAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp TGGTCAGGTCCCGATGCAGCAGGTCCAGCGAGCGTGTaGGGTAGAAGATGGTGGGTTCATACTCAAACACCC +
Preference number: 3 (lower is better)
Translates to: WSGPDAAGPASV*GRRWWVHTQTP
Trigger: GGGTGTTTGAGTATGAACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGCATCGGGACCTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 72 bp CTTTCAAGTATCCTCCCCAAAGGCTTAGCGCAGTCCTaGCCTGCCATGAACATGCCTGCGATCCCAGCCACA +
Preference number: 3 (lower is better)
Translates to: LSSILPKGLAQS*PAMNMPAIPAT
Trigger: TGTGGCTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCCTTTGGGGAGGATACTTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 72 bp CTCTCCCAGACTCAGTTTGGCCTTTATCAAATGCGATaGCAGTGCCACCGCCTGACAGGCACTCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: LSQTQFGLYQMR*QCHRLTGTLGV
Trigger: GACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTCATCGCATTTGATAAAGGCCAAACTGAGTCTGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR GCA 72 bp AAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTaGGGTTTGTTTATTCTCCGCCTGAGTTGCAGACAT +
Preference number: 3 (lower is better)
Translates to: KNVHPATARRPE*GLFILRLSCRH
Trigger: ATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp ACAGACAAGGGGCTTTCAGTGCAAAAACCAGACAGTTaGCCACTGAGCGCCAGGCGAGTAGTGACTACTGGG +
Preference number: 3 (lower is better)
Translates to: TDKGLSVQKPDS*PLSARRVVTTG
Trigger: CCCAGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp TTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTaGCTGTCTCTGTGTCTCTCTGTATCTCTCAGACTC +
Preference number: 3 (lower is better)
Translates to: LATMPWGLSVSL*LSLCLSVSLRL
Trigger: GAGTCTGAGAGATACAGAGAGACACAGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CCA 72 bp GGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATaGGACAGTTTTCTGAGGCGTTCACGTTTAGGGACT +
Preference number: 3 (lower is better)
Translates to: GRGGSHARASTV*DSFLRRSRLGT
Trigger: AGTCCCTAAACGTGAACGCCTCAGAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR-3UTR CAA 90 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGTTTCTTTCTGGGGTTTaGATTTTCCTTCTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: VHPATARRPECGLFILRLFLSGV*IFLLLW
Trigger: CCAAAGGAGAAGGAAAATCAAAACCCCAGAAAGAAA...CAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR TCA 72 bp ATGGGACAGTTTTCTGAGGCGTTCACGTTTAGGGACTaGCTCGTCAGTACCATTTATTATGCTGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: MGQFSEAFTFRD*LVSTIYYAVAE
Trigger: CTCTGCAACAGCATAATAAATGGTACTGACGAGTCAGTCCCTAAACGTGAACGCCTCAGAAAACTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCCGTGCATCCAGCCACTaGCCGTCGCCCGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SSLSVASARVQGPPTSPGRASSH*PSPGVR
Trigger: CCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACG...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 72 bp AAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTaGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KWWRPEKRPAQR*GAARDTSTSGR
Trigger: GCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGTGCTCATGGCCGAGGTaGGCCCGGGCGCCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVACSWPR*ARAPGA
Trigger: AGCGCCCGGCGCCCGGGCTCACCTCGGCCATGAGCA...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436027.9
CDS-3UTR TCA 90 bp CACCAGCACGTCAGGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCTGCTCATGGCCGAGGTaGGCCCGGGCGCCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HQHVRPQPVLRIAAGLCVCSWPR*ARAPGA
Trigger: AGCGCCCGGCGCCCGGGCTCACCTCGGCCATGAGCA...GACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCCTGACGTGCTGGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCGGTGTGGCCGCGGGTaGCGGTCACAGTGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRRCGRG*RSQCRD
Trigger: GTCGCGGCACTGTGACCGCCACCCGCGGCCACACCG...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR TCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGATGGACAGCAGCTTaGGCGTGGCCAGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGWTAA*AWPARG
Trigger: CCCGCGCGCTGGCCACGCTCAAGCTGCTGTCCATCC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTGGCGCAGAGCGAACTTaGGGCGCACGTCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSGAERT*GARHRA
Trigger: TGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCC...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGGTGGCGGTCACAGTaGCGCGACGCAGTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGWRSQ*RDAVGA
Trigger: GGCACCGACTGCGTCGCGGCACTGTGACCGCCACCC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGGCGGTCACAGTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGGGTGGCGGTCACAGTaGCGCGACGCAGTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VAVTVPRRSRCPCIPAGAGWRSQ*RDAVGA
Trigger: GGCACCGACTGCGTCGCGGCACTGTGACCGCCACCC...TGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCACTGTGACCGCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCCGCTCCAGGGCGGCTaGCTCCGCGGTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGPLQGG*LRGALA
Trigger: TGCCAGAGCACCGCGGAGGCAGCCGCCCTGGAGCGG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCA +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGQRSA*APRETP
Trigger: TGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GACCTCGCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCA +
Preference number: 4 (lower is better)
Translates to: DLARLHAGAQYGIHHQPIGQRSA*APRETP
Trigger: TGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCC...TATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGCGAGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCCGGCCACGAAGTGGTaGCGCCCGGAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRPATKW*RPEKRP
Trigger: TGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGG...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGAGGGTCCCTGCGGTGTaGCCGCGGGTGGCGGTCACA +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRRVPAV*PRVAVT
Trigger: TGTGACCGCCACCCGCGGCCACACCGCAGGGACCCT...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCGGGTCTGGGCCGGCTaGGCTGCTCATGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGRVWAG*AAHGRG
Trigger: ACCTCGGCCATGAGCAGCGCAGCCGGCCCAGACCCG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCCGGGTCTGGGCCGGCTaGGCTGCTCATGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VPRRSRCPCIPAGAERTCRVWAG*AAHGRG
Trigger: ACCTCGGCCATGAGCAGCGCAGCCGGCCCAGACCCG...GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCGGGTCTGGGCCGGCTaGGCTGCTCATGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVARVWAG*AAHGRG
Trigger: ACCTCGGCCATGAGCAGCGCAGCCGGCCCAGACCCG...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCCGCTCCAGGGCGGCTaGCTCCGCGGTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGPLQGG*LRGAEE
Trigger: TTCCTCAGCACCGCGGAGGCAGCCGCCCTGGAGCGG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436027.9
CDS-3UTR GCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCCCACTGCCCCGTTCTaGTCCGGGCCACACACGACC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRPTAPF*SGPHTT
Trigger: GGTCGTGTGTGGCCCGGAGCAGAACGGGGCAGTGGG...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp CGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACACCAGCACGTCAGGCCGCAGCGTGGTCAGGTCCCGATaGAGCAGGTCCAGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: RPAQRLGAARDTSTSGRSVVRSR*SRSSER
Trigger: ACGCTCGCTGGACCTGCTGCATCGGGACCTGACCAC...GCTGCGGCCTGACGTGCTGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCCGCGACGCAGTCGGTaGCCGTGTATCCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAPRRSR*PCIPAG
Trigger: GCCTGCCGGGATACACGGGCACCGACTGCGTCGCGG...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCCCGCGACGCAGTCGGTaGCCGTGTATCCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPRRSRCPCIPAGAERTCPRRSR*PCIPAG
Trigger: GCCTGCCGGGATACACGGGCACCGACTGCGTCGCGG...GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCGCGACGCAGTCGGTaGCCGTGTATCCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWPRRSR*PCIPAG
Trigger: GCCTGCCGGGATACACGGGCACCGACTGCGTCGCGG...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR GCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCCCCAGCACTGCTGGCTaGACGGTGAAGCACTCCATA +
Preference number: 4 (lower is better)
Translates to: SSLSVASARVQGPPTSPGPSTAG*TVKHSI
Trigger: TATGGAGTGCTTCACCGTGCAGCCAGCAGTGCTGGG...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCGCCTCCGACGGGTCTaGGCCGGCTGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGRLRRV*AGCAAH
Trigger: ATGAGCAGCGCAGCCGGCCCAGACCCGTCGGAGGCG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCCTCCGACGGGTCTaGGCCGGCTGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWRLRRV*AGCAAH
Trigger: ATGAGCAGCGCAGCCGGCCCAGACCCGTCGGAGGCG...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGGGCCAGCGCAGCGCTTaGGCGCCGCGAGAGACACCA +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWGQRSA*APRETP
Trigger: TGGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCC...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCCGGCCACGAAGTGGTaGCGCCCGGAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGPATKW*RPEKRP
Trigger: TGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp GACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACCCGGCCACGAAGTGGTaGCGCCCGGAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DAVGARVSRQAQSELAAHPATKW*RPEKRP
Trigger: TGGCCGCTTCTCCGGGCGCCACCACTTCGTGGCCGG...GTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCTGCCGGCCACGAAGTaGTGGCGCCCGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGLPATK*WRPEKR
Trigger: CCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCTGCCGGCCACGAAGTaGTGGCGCCCGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVALPATK*WRPEKR
Trigger: CCGCTTCTCCGGGCGCCACCACTTCGTGGCCGGCAG...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGAGGGTCCCTGCGGTGTaGCCGCGGGTGGCGGTCACA +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVARVPAV*PRVAVT
Trigger: TGTGACCGCCACCCGCGGCCACACCGCAGGGACCCT...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTCCTCAGTTTCCCCGCTaGAGATGCAGAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSPQFPR*RCRGPV
Trigger: GACCGGGCCTCTGCATCTCCAGCGGGGAAACTGAGG...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCGATGGGGCTTGGGCCTaGAGGCAACAGGATAGGACA +
Preference number: 4 (lower is better)
Translates to: SSLSVASARVQGPPTSPGDGAWA*RQQDRT
Trigger: TGTCCTATCCTGTTGCCTCCAGGCCCAAGCCCCATC...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 72 bp TCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTaGCGGCGCACGTCATCGGGCACGAACCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SVPVYPGRRRAN*RRTSSGTNLPA
Trigger: GGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGCCACGGCACTAGCATaGCCGCACAGCTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRATALA*PHSSTS
Trigger: GCTCGTGGAGCTGTGCGGTCATGCTAGTGCCGTGGC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR TCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCTCTGCGTCCCAGCCTaGGGGGATGTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRLCVPA*GDVQAH
Trigger: GTGAGCCTGGACATCCCCTCAGGCTGGGACGCAGAG...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp CGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGAACGCCTGGTCCGCTCCAGGGCGGCTaGCTCCGCGGTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RPAPSSASGRERATGTPGPLQGG*LRGAEE
Trigger: TTCCTCAGCACCGCGGAGGCAGCCGCCCTGGAGCGG...ACCAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCAAACACCCGCAGGTaGCGGGCACAGACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRSNTRR*RAQTSP
Trigger: GGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGA...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCATCGGGCACGAACCTaGCGGCCACGAAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRHRART*RPRSGG
Trigger: GCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATG...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTTGCCATGAACATGCCTaGGATCCCAGCCACACCGGG +
Preference number: 4 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSCHEHA*DPSHTG
Trigger: CCCGGTGTGGCTGGGATCGCAGGCATGTTCATGGCA...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp AAGTGGTGGCGCCCGGAGAAGCGGCCAGCGCAGCGCTTGGGCGCCGCGAGAGACCCCTCCTGGAGGCTGTaGAGTAGGGGAGCCCAACCT +
Preference number: 4 (lower is better)
Translates to: KWWRPEKRPAQRLGAARDPSWRL*SRGAQP
Trigger: AGGTTGGGCTCCCCTACTCCACAGCCTCCAGGAGGG...GTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCGCTTCTCCGGGCGCCACCACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGCCTCCGCGGTGCTCTaGCAAACAGGCCCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRASAVL*QTGPAF
Trigger: GAACGCAGGGCCTGTTTGCCAGAGCACCGCGGAGGC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCGGTGCTGAGGAAATaGCGCTCTTCGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGAVLRK*RSSGAS
Trigger: GGAGGCGCCCGAAGAGCGGCATTTCCTCAGCACCGC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436027.9
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGTSTVL*FRERAG
Trigger: GCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGT...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp CACCAGCACGTCAGGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HQHVRPQPVLRIAAGLCVTSTVL*FRERAG
Trigger: GCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGT...GACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCCTGACGTGCTGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWTSTVL*FRERAG
Trigger: GCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGT...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCTCAAACACCCGCAGGTaGCGGGCACAGACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGSNTRR*RAQTSP
Trigger: GGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGA...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCTCAAACACCCGCAGGTaGCGGGCACAGACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VPRRSRCPCIPAGAERTCSNTRR*RAQTSP
Trigger: GGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGA...GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCGTCCTCCGAATCGCTaGCGGTCTCTGCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVARPPNR*RSLRPS
Trigger: GCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACG...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACCGTCCTCCGAATCGCTaGCGGTCTCTGCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DAVGARVSRQAQSELAAHRPPNR*RSLRPS
Trigger: GCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACG...GTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGCGCAGAGCGAACTTaGGGCGCACGTCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAGAERT*GARHRA
Trigger: TGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCC...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCCCAGCCTGAGGGGGCCCGTCGCCCGGAGTaGGGTTTGTTTATTCTCCGC +
Preference number: 4 (lower is better)
Translates to: GRSPSSESLPVSASQPEGARRPE*GLFILR
Trigger: GCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC...CCCCTCAGGCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGTCGGCAAGTGGGGGCTaGAGCTCCAAGGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVASASGG*SSKALR
Trigger: CCTCAGGGCCTTGGAGCTGCAGCCCCCACTTGCCGA...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp TACTCAAACACCCGCAGGTGCCGGGCACAGACCAGCCCCACTGCCCCGTTCTGCAGGGTCCCTGCGGTGTaGCCGCGGGTGGCGGTCACA +
Preference number: 4 (lower is better)
Translates to: YSNTRRCRAQTSPTAPFCRVPAV*PRVAVT
Trigger: TGTGACCGCCACCCGCGGCCACACCGCAGGGACCCT...GCAGAACGGGGCAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCCCCACTGCCCCGTTCTaGTCCGGGCCACACACGACC +
Preference number: 4 (lower is better)
Translates to: CIPAGAERTCGARHRARTPTAPF*SGPHTT
Trigger: GGTCGTGTGTGGCCCGGAGCAGAACGGGGCAGTGGG...GGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGTGGTCAGGTCCCGATaGAGCAGGTCCAGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGVVRSR*SRSSER
Trigger: ACGCTCGCTGGACCTGCTGCATCGGGACCTGACCAC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTGGTCAGGTCCCGATaGAGCAGGTCCAGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAVVRSR*SRSSER
Trigger: ACGCTCGCTGGACCTGCTGCATCGGGACCTGACCAC...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR GCA 90 bp GACCTCGCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATACCTGGGTTGCAGCTCTaGTTCCATCCCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: DLARLHAGAQYGIHHQPIPGLQL*FHPPLT
Trigger: GGTCAGAGGGGGATGGAAGCAGAGCTGCAACCCAGG...TATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGCGAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCACAGTGCCGCGACGCAGTAGCGCAGTCCTGACCTaGCATGAACATGCCTGCGAT +
Preference number: 4 (lower is better)
Translates to: ARVPAVWPRVAVTVPRRSSAVLT*HEHACD
Trigger: ATCGCAGGCATGTTCATGGCAGGTCAGGACTGCGCT...ACTGCGTCGCGGCACTGTGACCGCCACCCGCGGCCACACCGCAGGGACCCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCTTGGCCTTTATCAAATaGGATGACAGTGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SSLSVASARVQGPPTSPGLAFIK*DDSATA
Trigger: GGCGGTGGCACTGTCATCGCATTTGATAAAGGCCAA...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGAAGGCCCTGAGGAAATaGCGCTCTTCGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAKALRK*RSSGAS
Trigger: GGAGGCGCCCGAAGAGCGGCATTTCCTCAGGGCCTT...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCCCAGCCTGAGGGGTCCATCTTCTCGCACTaGGTGGTCAGGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: GRSPSSESLPVSASQPEGSIFSH*VVRSRC
Trigger: GCATCGGGACCTGACCACCCAGTGCGAGAAGATGGA...CCCCTCAGGCTGGGACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGGAGGGCTGTTTATTaGCGAGGGTCCCTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGRAVY*RGSLRC
Trigger: ACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGGCTTCGATGCCCAGCACTGCTaGCTGCACGGTGAAGCACTC +
Preference number: 4 (lower is better)
Translates to: ARLHAGAQYGIHHQPIGFDAQHC*LHGEAL
Trigger: GAGTGCTTCACCGTGCAGCCAGCAGTGCTGGGCATC...GAAGCCTATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp CACCAGCACGTCAGGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCTGCCCTGATTCTGCGTaGCCCCAGCCCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HQHVRPQPVLRIAAGLCVCPDSA*PQPLLS
Trigger: GGAGAGAAGGGGCTGGGGCCACGCAGAATCAGGGCA...GACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCCTGACGTGCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCTCCCATGTCGGCAAGTaGGGGCTGCAGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGSHVGK*GLQLQG
Trigger: GCCTTGGAGCTGCAGCCCCCACTTGCCGACATGGGA...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR GCA 90 bp TACTCAAACACCCGCAGGTGCCGGGCACAGACCAGCCCCACTGCCCCGTTCTGCGCGGTGCTGAGGAAATaGCGCTCTTCGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: YSNTRRCRAQTSPTAPFCAVLRK*RSSGAS
Trigger: GGAGGCGCCCGAAGAGCGGCATTTCCTCAGCACCGC...GCAGAACGGGGCAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp AGCAGCTTGAGCGTGGCCAGCGCGCGGGTGCAGGGGCCCCCGACCTCGCCCGGCTGGGGTAGAAGATGGTaGGTTCATACTCAAACACCC +
Preference number: 4 (lower is better)
Translates to: SSLSVASARVQGPPTSPGWGRRW*VHTQTP
Trigger: GGGTGTTTGAGTATGAACCCACCATCTTCTACCCCA...GCCGGGCGAGGTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGTCCAGCGAGCGTGTaGGGTAGAAGATGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGPASV*GRRWWV
Trigger: AACCCACCATCTTCTACCCCACACGCTCGCTGGACC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCTTCTCGCACTGGGTaGTCAGGTCCCGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRSSRTG*SGPDAA
Trigger: TGCTGCATCGGGACCTGACCACCCAGTGCGAGAAGA...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCCATCTTCTCGCACTaGGTGGTCAGGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRSIFSH*VVRSRC
Trigger: GCATCGGGACCTGACCACCCAGTGCGAGAAGATGGA...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGAGGGCTGTTTATTaGCGAGGGTCCCTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGGRAVY*RGSLRC
Trigger: ACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR TCA 90 bp GGGCCACACACGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGGGCTTAGCGCAGTCCTaGCCTGCCATGAACATGCCT +
Preference number: 4 (lower is better)
Translates to: GPHTTSTVLCFRERAGNGGLAQS*PAMNMP
Trigger: AGGCATGTTCATGGCAGGTCAGGACTGCGCTAAGCC...CCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTGCTCTAGCCATGACTaGCTTCCCCAGGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRCSSHD*LPQACF
Trigger: GAAACAGGCCTGGGGAAGGCAGTCATGGCTAGAGCA...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGTCCAGCGAGCGTGTaGGGTAGAAGATGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGGPASV*GRRWWV
Trigger: AACCCACCATCTTCTACCCCACACGCTCGCTGGACC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGTCTTCTCGCACTGGGTaGTCAGGTCCCGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVASSRTG*SGPDAA
Trigger: TGCTGCATCGGGACCTGACCACCCAGTGCGAGAAGA...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGTCCATCTTCTCGCACTaGGTGGTCAGGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWSIFSH*VVRSRC
Trigger: GCATCGGGACCTGACCACCCAGTGCGAGAAGATGGA...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GGGCCACACACGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGGGAGGTGAGCTGTTCTaGATGAGGGGTTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPHTTSTVLCFRERAGNGGGELF*MRGWAS
Trigger: AGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCC...CCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGAGGTGGTAGCATTTaGGCTAAGCTCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGGGGSI*AKLRSS
Trigger: GGAAGAGCGGAGCTTAGCTCAAATGCTACCACCTCC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR GCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGCAGACACACCTGGGTTaGAGCTCTGCTTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVAQTHLG*SSASIP
Trigger: GGGGATGGAAGCAGAGCTGCAACCCAGGTGTGTCTG...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGACTGATGCCCAGCACTaGTGGCTGCACGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVATDAQH*WLHGEA
Trigger: TGCTTCACCGTGCAGCCAGCAGTGCTGGGCATCAGT...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp CATGCCTGCGATCCCAGCCACACCGGGCCCAGAGCCCAAGACCCAAGACTGGGAGGAAGGGATGGGGCTTaGGCCTGGAGGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: HACDPSHTGPRAQDPRLGGRDGA*AWRQQD
Trigger: ATCCTGTTGCCTCCAGGCCCAAGCCCCATCCCTTCC...TCCCAGTCTTGGGTCTTGGGCTCTGGGCCCGGTGTGGCTGGGATCGCAGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCCTGTTTCCTCCTCTaGACAAGGGAGGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAACFLL*TREVVA
Trigger: TGCTACCACCTCCCTTGTCCAGAGGAGGAAACAGGC...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR TCA 90 bp CCCAACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTGCCACGGCACTAGCATaGCCGCACAGCTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: PNLSHDALGPLCLSLAVSATALA*PHSSTS
Trigger: GCTCGTGGAGCTGTGCGGTCATGCTAGTGCCGTGGC...AGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTCATCGGGCACGAACCTaGCGGCCACGAAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VQEKRASSHCPSPGVRFVHRART*RPRSGG
Trigger: GCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATG...AACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp TGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCTTAGCCACGATGCCCTaGGGCCTCTCTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CIPAGAERTCGARHRARTLATMP*GLSVSL
Trigger: GAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAA...GGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp TACTCAAACACCCGCAGGTGCCGGGCACAGACCAGCCCCACTGCCCCGTTCTGCTTCTGGATGAGGGGTTaGGCCTCTTGGGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: YSNTRRCRAQTSPTAPFCFWMRG*ASWGLS
Trigger: ACTGAGGCCCCAAGAGGCCCAACCCCTCATCCAGAA...GCAGAACGGGGCAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GCGATGACAGTGCCACCGCCTGACAGGCACTCTGGGTGTCTCTTGAGCCCCAGCACCCAAGACTGGGACTaGGGGGCTTCTGGACAGACA +
Preference number: 4 (lower is better)
Translates to: AMTVPPPDRHSGCLLSPSTQDWD*GASGQT
Trigger: TGTCTGTCCAGAAGCCCCTCAGTCCCAGTCTTGGGT...GCTGGGGCTCAAGAGACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCCTGCGTTCCAAATCTaGTCTAGCCATGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGPAFQI*SSHDCL
Trigger: AAGGCAGTCATGGCTAGAGCAGATTTGGAACGCAGG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCGCCTCCGACGGGTCTaGGCCGGCTGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: EKRASSHCPSPGVRFVYSRLRRV*AGCAAH
Trigger: ATGAGCAGCGCAGCCGGCCCAGACCCGTCGGAGGCG...AGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGATTTTCCTTCTCCTTTaGGCGCCTCACCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVAIFLLL*APHPGS
Trigger: AGATCCCGGGTGAGGCGCCCAAAGGAGAAGGAAAAT...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp CATGCCTGCGATCCCAGCCACACCGGGCCCAGAGCCCAAGACCCAAGACTGGGAGGACTGAGGGGCTTCTaGACAGACAAGGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HACDPSHTGPRAQDPRLGGLRGF*TDKGLS
Trigger: TGAAAGCCCCTTGTCTGTCCAGAAGCCCCTCAGTCC...TCCCAGTCTTGGGTCTTGGGCTCTGGGCCCGGTGTGGCTGGGATCGCAGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATGGGACAGTTTTCCTCTGCGTCCCAGCCTaGGGGGATGTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GEEEEAVTLEPRLYGTVFLCVPA*GDVQAH
Trigger: GTGAGCCTGGACATCCCCTCAGGCTGGGACGCAGAG...GAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGGGTGCAGGAAAAACGTaGATCCAGCCACTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: VHPATARRPECGLFILRLGAGKT*IQPLPV
Trigger: GACGGGCAGTGGCTGGATGCACGTTTTTCCTGCACC...CAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCTGGGGTAGAAGATGGTaGGTTCATACTCAAACACCC +
Preference number: 4 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGWGRRW*VHTQTP
Trigger: GGGTGTTTGAGTATGAACCCACCATCTTCTACCCCA...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CCA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGTGTGGGGTAGAAGATaGTGGGTTCATACTCAAACA +
Preference number: 4 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRVWGRR*WVHTQT
Trigger: TGTTTGAGTATGAACCCACCATCTTCTACCCCACAC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CCA 90 bp GAGCCCCAGCTGTACTTTAAGCTCCAACCACACAGACAGCAGATTACTCCCCTTCGGTGTGGCCGCGGGTaGCGGTCACAGTGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: EPQLYFKLQPHRQQITPLRCGRG*RSQCRD
Trigger: GTCGCGGCACTGTGACCGCCACCCGCGGCCACACCG...AAGGGGAGTAATCTGCTGTCTGTGTGGTTGGAGCTTAAAGTACAGCTGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTGGGAGGGCTGTTTATTaGCGAGGGTCCCTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: VQEKRASSHCPSPGVRFVGRAVY*RGSLRC
Trigger: ACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCC...AACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp CCCAACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTTGGCCCCTCGAGGTGTaGGGGTTTACTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PNLSHDALGPLCLSLAVSWPLEV*GFTPEP
Trigger: TGGCTCTGGAGTAAACCCCCACACCTCGAGGGGCCA...AGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp CAACAGGATAGGACAGGAGGTGAGCTGTTCTGGATGAGGGGTTGGGCCTCTTGGGACAGTGCCACCGCCTaGCAGGCACTCTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QQDRTGGELFWMRGWASWDSATA*QALWVS
Trigger: AGACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTC...CCAAGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCCTGTCCTATCCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp CACCAGCACGTCAGGCCGCAGCCCGTCCTCCGAATCGCTGCCGGTCTCTGCGTCGTGTGGGGTAGAAGATaGTGGGTTCATACTCAAACA +
Preference number: 4 (lower is better)
Translates to: HQHVRPQPVLRIAAGLCVVWGRR*WVHTQT
Trigger: TGTTTGAGTATGAACCCACCATCTTCTACCCCACAC...GACGCAGAGACCGGCAGCGATTCGGAGGACGGGCTGCGGCCTGACGTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGGTGTGGGGTAGAAGATaGTGGGTTCATACTCAAACA +
Preference number: 4 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWVWGRR*WVHTQT
Trigger: TGTTTGAGTATGAACCCACCATCTTCTACCCCACAC...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CCA 90 bp GCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTCTTGTGTCATCCTCCTaGCCCCTCGAGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARRPECGLFILRLSCRHSLVSSS*PLEVWG
Trigger: CCCCCACACCTCGAGGGGCCAGGAGGATGACACAAG...AGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp ACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTGTGTAGTCCTGACCTGCCATaGACATGCCTGCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: TLATMPWGLSVSLWLSLCSPDLP*TCLRSQ
Trigger: CTGGGATCGCAGGCATGTTCATGGCAGGTCAGGACT...ACACAGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GCGATGACAGTGCCACCGCCTGACAGGCACTCTGGGTGTCTCTTGAGCCCCAGCCTTTATCAAATGCGATaGCAGTGCCACCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: AMTVPPPDRHSGCLLSPSLYQMR*QCHRLT
Trigger: TGTCAGGCGGTGGCACTGTCATCGCATTTGATAAAG...GCTGGGGCTCAAGAGACACCCAGAGTGCCTGTCAGGCGGTGGCACTGTCATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GAACTTGCGGCGCACGTCATCGGGCACGAACCTGCCGGCCACGAAGTGGTGGCGATTCTCCGCCTGAGTTaGAGACATTCTTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ELAAHVIGHEPAGHEVVAILRLS*RHSSTF
Trigger: AAAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAAT...CGCCACCACTTCGTGGCCGGCAGGTTCGTGCCCGATGACGTGCGCCGCAAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GTGCAGGAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTGCTCTGCCAGGTCGGTaGAGGAAAAACGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: VQEKRASSHCPSPGVRFVALPGR*RKNVHP
Trigger: TGGATGCACGTTTTTCCTGCACCGACCTGGCAGAGC...AACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTCCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTGACCTCAGCCCCTCCTaGAGGCTGTGGAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: EKRASSHCPSPGVRFVYSDLSPS*RLWSRG
Trigger: TCCCCTACTCCACAGCCTCCAGGAGGGGCTGAGGTC...AGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp TGTATCCCGGCAGGCGCAGAGCGAACTTGCGGCGCACGTCATCGGGCACGAACCTGTTTATTCTCCGCCTaGGTTGCAGACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CIPAGAERTCGARHRARTCLFSA*VADILP
Trigger: TGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACA...GGTTCGTGCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCTGCCGGGATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TCAGTGCAAAAACCAGACAGTTGGCCACTGAGCGCCAGGCGAGTAGTGACTACTTTTCCCCGCTGGAGATaGAGAGGCCCGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVQKPDSWPLSARRVVTTFPRWR*RGPVSG
Trigger: GCCTGAGACCGGGCCTCTGCATCTCCAGCGGGGAAA...AGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGAGCCTCGACTGTATaGGACAGTTTTCTGAGGCGT +
Preference number: 4 (lower is better)
Translates to: VHPATARRPECGLFILRLRASTV*DSFLRR
Trigger: ACGCCTCAGAAAACTGTCCCATACAGTCGAGGCTCT...CAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGCTCCCCACCTGTCTCTaGCTGTTTCTGTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VHPATARRPECGLFILRLLPTCL*LFLYLS
Trigger: TGAGAGATACAGAAACAGCCAGAGACAGGTGGGGAG...CAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 72 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTaGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHPATARRPECG*FILRLSCRHSS
Trigger: GGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp CAACAGGATAGGACAGGAGGTGAGCTGTTCTGGATGAGGGGTTGGGCCTCTTGGTGTTGCAGAGGAAACTaGTGCCCAGCACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QQDRTGGELFWMRGWASWCCRGN*CPALLA
Trigger: AGCCAGCAGTGCTGGGCATCAGTTTCCTCTGCAACA...CCAAGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCCTGTCCTATCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp TCAGTGCAAAAACCAGACAGTTGGCCACTGAGCGCCAGGCGAGTAGTGACTACTGTGAGCTGTTCTGGATaGGGGGTTGGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SVQKPDSWPLSARRVVTTVSCSG*GVGPLG
Trigger: CCCAAGAGGCCCAACCCCTCATCCAGAACAGCTCAC...AGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp TCAGTGCAAAAACCAGACAGTTGGCCACTGAGCGCCAGGCGAGTAGTGACTACTCCCGGTCTCAGGCTCTaGCAGGTCGGTGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVQKPDSWPLSARRVVTTPGLRL*QVGAGK
Trigger: TTTTCCTGCACCGACCTGGCAGAGCCTGAGACCGGG...AGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GAAAAACGTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTTCTTCTCGCACTGGGTaGTCAGGTCCCGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: EKRASSHCPSPGVRFVYSSSRTG*SGPDAA
Trigger: TGCTGCATCGGGACCTGACCACCCAGTGCGAGAAGA...AGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCACGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTAGAGCCAGACACACCTaGGTTGCAGCTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ARRPECGLFILRLSCRHSRARHT*VAALLP
Trigger: TGGAAGCAGAGCTGCAACCCAGGTGTGTCTGGCTCT...AGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATGGGACAGTTTTCCAAAAACCAGACAGTTaGCCACTGAGCGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GEEEEAVTLEPRLYGTVFQKPDS*PLSARR
Trigger: TCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTG...GAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp CCCAACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTACAAGGGGCTTTCAGTaGAAAAACCAGACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PNLSHDALGPLCLSLAVSTRGFQ*KNQTVG
Trigger: GCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGT...AGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR GCA 90 bp GGGGAGGAAGAGGAGGCAGTCACGCTAGAGCCTCGACTGTATGGGACAGTTTTCGTCCAGATTCCTCCTTaGCTGGAGAGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: GEEEEAVTLEPRLYGTVFVQIPP*LERKLR
Trigger: CCTCAGTTTCCTCTCCAGGCAAGGAGGAATCTGGAC...GAAAACTGTCCCATACAGTCGAGGCTCTAGCGTGACTGCCTCCTCTTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp TCAGTGCAAAAACCAGACAGTTGGCCACTGAGCGCCAGGCGAGTAGTGACTACTGGTCCAGCGAGCGTGTaGGGTAGAAGATGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SVQKPDSWPLSARRVVTTGPASV*GRRWWV
Trigger: AACCCACCATCTTCTACCCCACACGCTCGCTGGACC...AGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
3UTR CAA 72 bp GACAGACAAGGGGCTTTCAGTGCAAAAACCAGACAGTaGGCCACTGAGCGCCAGGCGAGTAGTGACTACTGG +
Preference number: 4 (lower is better)
Translates to: DRQGAFSAKTRQ*ATERQASSDYW
Trigger: CCAGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGAAAGCCCCTTGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR TCA 90 bp GTGCATCCAGCCACTGCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGTTCACGTTTAGGGACTaGCTCGTCAGTACCATTTAT +
Preference number: 4 (lower is better)
Translates to: VHPATARRPECGLFILRLFTFRD*LVSTIY
Trigger: ATAAATGGTACTGACGAGTCAGTCCCTAAACGTGAA...CAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGCAGTGGCTGGATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp ACCTTAGCCACGATGCCCTGGGGCCTCTCTGTCTCTCTCTGGCTGTCTCTGTGTCTCCCAGACTCAGTTTaGCCTTTATCAAATGCGATG +
Preference number: 4 (lower is better)
Translates to: TLATMPWGLSVSLWLSLCLPDSV*PLSNAM
Trigger: CATCGCATTTGATAAAGGCCAAACTGAGTCTGGGAG...ACACAGAGACAGCCAGAGAGAGACAGAGAGGCCCCAGGGCATCGTGGCTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CCA 90 bp GCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTCTCTCCATCTGTCTCTaGCCATCTCTGTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: ARRPECGLFILRLSCRHSLSICL*PSLYLS
Trigger: TGAGAGATACAGAGATGGCCAGAGACAGATGGAGAG...AGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS CCA 90 bp CGCGGTGCTGAGGAAATGCCGCTCTTCGGGCGCCTCCGACGGGTCTaGGCCGGCTGCGCTGCTCATGGCCGAGGTGAGCCCGGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: RGAEEMPLFGRLRRV*AGCAAHGRGEPGRR
Trigger: CCGGCGCCCGGGCTCACCTCGGCCATGAGCAGCGCAGCCGGCCCAGACCCGTCGGAGGCGCCCGAAGAGCGGCATTTCCTCAGCACCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000458210.7
CDS-3UTR CAA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGCGGCCAGCGCAGCGCTaGGGCGCCGCGAGAGACACC +
Preference number: 5 (lower is better)
Translates to: WWEGCLLARVPAVWPRVARPAQR*GAARDT
Trigger: GGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCCGGCCAGCGCAGCGCTaGGGCGCCGCGAGAGACACC +
Preference number: 5 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGRPAQR*GAARDT
Trigger: GGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGGGATGGACAGCAGCTaGAGCGTGGCCAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: GGRAVYWRGSLRCGRGWRGMDSS*SVASAR
Trigger: CCGCGCGCTGGCCACGCTCAAGCTGCTGTCCATCCC...CCGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436027.9
ENST00000458210.7
ENST00000514277.6
CDS-3UTR CAA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGATGGACAGCAGCTaGAGCGTGGCCAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGGMDSS*SVASAR
Trigger: CCGCGCGCTGGCCACGCTCAAGCTGCTGTCCATCCC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGAGGCGCAGAGCGAACTaGCGGCGCACGTCATCGGGC +
Preference number: 5 (lower is better)
Translates to: WWEGCLLARVPAVWPRVARRRAN*RRTSSG
Trigger: GCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCT...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GGTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGAGGCGCAGAGCGAACTaGCGGCGCACGTCATCGGGC +
Preference number: 5 (lower is better)
Translates to: GGGRAVYWRGSLRCGRGWRRRAN*RRTSSG
Trigger: GCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCT...CCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS-3UTR CAA 90 bp CGACCAGCACCGTCCTCTGCTTCCGGGAGAGAGCGGGCAACGGGAACGCCTGGTAGGCGCAGAGCGAACTaGCGGCGCACGTCATCGGGC +
Preference number: 5 (lower is better)
Translates to: RPAPSSASGRERATGTPGRRRAN*RRTSSG
Trigger: GCCCGATGACGTGCGCCGCAAGTTCGCTCTGCGCCT...ACCAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS GCA 90 bp ACTGCCCCGTTCTGCTCCGGGCCACACACGACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGCAACGGGAACGCCTTGGTCACAGCC +
Preference number: 5 (lower is better)
Translates to: TAPFCSGPHTTSTVL*FRERAGNGNALVTA
Trigger: GGCTGTGACCAAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCCGGAGCAGAACGGGGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGCAACGGGAACGCCTaGGTCACAGCCACGGCACTA +
Preference number: 5 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGGNGNA*VTATAL
Trigger: TAGTGCCGTGGCTGTGACCAAGGCGTTCCCGTTGCC...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGGGCAACGGGAACGCCTaGGTCACAGCCACGGCACTA +
Preference number: 5 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAGNGNA*VTATAL
Trigger: TAGTGCCGTGGCTGTGACCAAGGCGTTCCCGTTGCC...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp TGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCGTGGGAGGGCTGTTTATaGGCGAGGGTCCCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: WWEGCLLARVPAVWPRVAWEGCL*ARVPAV
Trigger: CACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCA...CGCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GTGGTGGGAGGGCTGTTTATTGGCGAGGGTCCCTGCGGTGTGGCCGCGGGTGGCTGGGAGGGCTGTTTATaGGCGAGGGTCCCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: VVGGLFIGEGPCGVAAGGWEGCL*ARVPAV
Trigger: CACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCA...GCCACCCGCGGCCACACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS-3UTR CAA 90 bp GCCCGGCTCCACGCCGGGGCCCAGTACGGCATCCACCACCAGCCCATAGGCTTCGCAAAAACCAGACAGTaGGCCACTGAGCGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ARLHAGAQYGIHHQPIGFAKTRQ*ATERQA
Trigger: CGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGC...GAAGCCTATGGGCTGGTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp GTGCCGCGACGCAGTCGGTGCCCGTGTATCCCGGCAGGCGCAGAGCGAACTTGCCCAGACACACCTGGGTaGCAGCTCTGCTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: VPRRSRCPCIPAGAERTCPDTPG*QLCFHP
Trigger: GGGATGGAAGCAGAGCTGCAACCCAGGTGTGTCTGG...GCAAGTTCGCTCTGCGCCTGCCGGGATACACGGGCACCGACTGCGTCGCGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp CAACAGGATAGGACAGGAGGTGAGCTGTTCTGGATGAGGGGTTGGGCCTCTTGGGGGATGGACAGCAGCTaGAGCGTGGCCAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: QQDRTGGELFWMRGWASWGMDSS*SVASAR
Trigger: CCGCGCGCTGGCCACGCTCAAGCTGCTGTCCATCCC...CCAAGAGGCCCAACCCCTCATCCAGAACAGCTCACCTCCTGTCCTATCCTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp CATGCCTGCGATCCCAGCCACACCGGGCCCAGAGCCCAAGACCCAAGACTGGGACGCCCGGAGTGCGGTTaGTTTATTCTCCGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: HACDPSHTGPRAQDPRLGRPECG*FILRLS
Trigger: ACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCG...TCCCAGTCTTGGGTCTTGGGCTCTGGGCCCGGTGTGGCTGGGATCGCAGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp GAGCCCCAGCTGTACTTTAAGCTCCAACCACACAGACAGCAGATTACTCCCCTTCGGCCAGCGCAGCGCTaGGGCGCCGCGAGAGACACC +
Preference number: 5 (lower is better)
Translates to: EPQLYFKLQPHRQQITPLRPAQR*GAARDT
Trigger: GGTGTCTCTCGCGGCGCCCAAGCGCTGCGCTGGCCG...AAGGGGAGTAATCTGCTGTCTGTGTGGTTGGAGCTTAAAGTACAGCTGGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp GCCCGTCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTGGGAGGGCTGTTTATaGGCGAGGGTCCCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: ARRPECGLFILRLSCRHSWEGCL*ARVPAV
Trigger: CACCGCAGGGACCCTCGCCAATAAACAGCCCTCCCA...AGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp TCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACTTCAGTTTCCCCACCTaGGTCACAGCCACGGCACTA +
Preference number: 5 (lower is better)
Translates to: SPGVRFVYSPPELQTFFHFSFPT*VTATAL
Trigger: TAGTGCCGTGGCTGTGACCAAGGTGGGGAAACTGAA...GTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS CCA 90 bp GCACTCCATAGTATGATTATTGCTATCACCCTTGTGTCATCCTCCTaGCCCCTCGAGGTGTGGGGGTTTACTCCAGAGCCAGACACACCT +
Preference number: 5 (lower is better)
Translates to: ALHSMIIAITLVSSS*PLEVWGFTPEPDTP
Trigger: AGGTGTGTCTGGCTCTGGAGTAAACCCCCACACCTCGAGGGGCCAGGAGGATGACACAAGGGTGATAGCAATAATCATACTATGGAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp TCAGTGCAAAAACCAGACAGTTGGCCACTGAGCGCCAGGCGAGTAGTGACTACTTATTCTCCGCCTGAGTaGCAGACATTCTTCCACCTT +
Preference number: 5 (lower is better)
Translates to: SVQKPDSWPLSARRVVTTYSPPE*QTFFHL
Trigger: AAGGTGGAAGAATGTCTGCAACTCAGGCGGAGAATA...AGTAGTCACTACTCGCCTGGCGCTCAGTGGCCAACTGTCTGGTTTTTGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS-3UTR CAA 90 bp TCGCCCGGAGTGCGGTTTGTTTATTCTCCGCCTGAGTTGCAGACATTCTTCCACTTTCTTTCTGGGGTTTaGATTTTCCTTCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SPGVRFVYSPPELQTFFHFLSGV*IFLLLW
Trigger: CCAAAGGAGAAGGAAAATCAAAACCCCAGAAAGAAA...GTGGAAGAATGTCTGCAACTCAGGCGGAGAATAAACAAACCGCACTCCGGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS GCA 72 bp TTCTGCTCCGGGCCACACACGACCAGCACCGTCCTCTaGTTCCGGGAGAGAGCGGGCAACGGGAACGCCTTG +
Preference number: 6 (lower is better)
Translates to: FCSGPHTTSTVL*FRERAGNGNAL
Trigger: CAAGGCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGTGCTGGTCGTGTGTGGCCCGGAGCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436027.9
ENST00000514277.6
CDS GCA 72 bp TTTACTCCAGAGCCAGACACACCTGGGTTGCAGCTCTaGTTCCATCCCCCTCTGACCCAGGGCAGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: FTPEPDTPGLQL*FHPPLTQGRPL
Trigger: GAGGGGCCTGCCCTGGGTCAGAGGGGGATGGAAGCAGAGCTGCAACCCAGGTGTGTCTGGCTCTGGAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS GCA 72 bp CTAAGCTCCGCTCTTCCCATGTCGGCAAGTGGGGGCTaGAGCTCCAAGGCCCTGAGGAAATGCCGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: LSSALPMSASGG*SSKALRKCRSS
Trigger: CGAAGAGCGGCATTTCCTCAGGGCCTTGGAGCTGCAGCCCCCACTTGCCGACATGGGAAGAGCGGAGCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS CCA 72 bp ATCACCCTTGTGTCATCCTCCTGGCCCCTCGAGGTGTaGGGGTTTACTCCAGAGCCAGACACACCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: ITLVSSSWPLEV*GFTPEPDTPGL
Trigger: CAACCCAGGTGTGTCTGGCTCTGGAGTAAACCCCCACACCTCGAGGGGCCAGGAGGATGACACAAGGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458210.7
CDS TCA 72 bp CTGTTTCCTCCTCTGGACAAGGGAGGTGGTAGCATTTaGGCTAAGCTCCGCTCTTCCCATGTCGGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: LFPPLDKGGGSI*AKLRSSHVGKW
Trigger: CCACTTGCCGACATGGGAAGAGCGGAGCTTAGCTCAAATGCTACCACCTCCCTTGTCCAGAGGAGGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514277.6
CDS CCA 72 bp AGTATGATTATTGCTATCACCCTTGTGTCATCCTCCTaGCCCCTCGAGGTGTGGGGGTTTACTCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SMIIAITLVSSS*PLEVWGFTPEP
Trigger: TGGCTCTGGAGTAAACCCCCACACCTCGAGGGGCCAGGAGGATGACACAAGGGTGATAGCAATAATCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458210.7