Pregenerated sensors for YIPF7 (Homo sapiens)
Ensembl gene IDs: ENSG00000177752Ensembl transcript IDs: ENST00000332990.6, ENST00000415895.8, ENST00000415895.9, ENST00000508947.1, ENST00000682193.1, ENST00000682988.1, ENST00000684034.1, ENST00000684496.1, ENST00000684735.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTCTCAGAAATACCTCTATTGAGAAAAGCAGGGTTGATCAGTACAGCAACTGTAGCACCACCCTTAAGTaGTGCTTTGTCTCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLRNTSIEKSRVDQYSNCSTTLK*CFVSLL Trigger: AAGCAGAGAGACAAAGCAGCACTTAAGGGTGGTGCT...ACAGTTGCTGTACTGATCAACCCTGCTTTTCTCAATAGAGGTATTTCTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415895.8 |
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| 3UTR-3UTR GCA 90 bp | CTTACTTTTCTCAGAAATACCTCTATTGAGAAAAGCAGGGTTGATCAGTACAGCGCTGCTTTGTCTCTCTaGTTATTACTCTCTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LTFLRNTSIEKSRVDQYSAALSL*LLLSQK Trigger: CTTTTGAGAGAGTAATAAGCAGAGAGACAAAGCAGC...GCTGTACTGATCAACCCTGCTTTTCTCAATAGAGGTATTTCTGAGAAAAGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000415895.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAAGCAAAACATCATTCAAACCAACAGGCTATTAGAGCACCACCCTTAAGTACAGCAAACAGAGTCTaGAAATGCCATCTCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: SKAKHHSNQQAIRAPPLSTANRV*KCHLKH Trigger: ATGTTTGAGATGGCATTTCAAGACTCTGTTTGCTGT...ACTTAAGGGTGGTGCTCTAATAGCCTGTTGGTTTGAATGATGTTTTGCTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415895.8 |
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| CDS GCA 90 bp | CCACTCCACTACCCGGCGCCAAGACGCGCTGATGTCACGACAGCGTaGGGCGTGCAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PLHYPAPRRADVTTA*GVQTSASCAAASGC Trigger: GCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 90 bp | ACTACCCGGCGCCAAGACGCGCTGATGTCACGACAGCGTGCGGCGTaGAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTTGCTTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: TTRRQDALMSRQRAA*RRRQAAPPLRVASG Trigger: TCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 90 bp | GCGTGCGGCGTGCAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTTaGTTCCGGATCTGGTACTTGGGCAGAGCTCCCCGGGGTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: ACGVQTSASCAAASG*FRIWYLGRAPRGSL Trigger: CAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 90 bp | CGCGCTGATGTCACGACAGCGTGCGGCGTGCAGACGTCGGCAAGCTaGGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTACTTGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RADVTTACGVQTSAS*AAASGCFRIWYLGR Trigger: TCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS TCA 90 bp | GACTTTCCCAAAGTGACCACTCCACTACCCGGCGCCAAGACGCGCTaGTGTCACGACAGCGTGCGGCGTGCAGACGTCGGCAAGCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: DFPKVTTPLPGAKTR*CHDSVRRADVGKLR Trigger: GCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACTTTGGGAAAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS TCA 90 bp | AAGTTTGACATCGTGACCACTCCACTACCCGGCGCCAAGACGCGCTaGTGTCACGACAGCGTGCGGCGTGCAGACGTCGGCAAGCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: KFDIVTTPLPGAKTR*CHDSVRRADVGKLR Trigger: GCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACGATGTCAAACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684496.1 |
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| CDS CCA 90 bp | CAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTTGCTTCCGGATCTaGTACTTGGGCAGAGCTCCCCGGGGTTCATTGTCTTCGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: QTSASCAAASGCFRI*YLGRAPRGSLSSLH Trigger: GTGAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CCA 90 bp | CGGCAAGCTGCGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTACTTaGGCAGAGCTCCCCGGGGTTCATTGTCTTCGCTTCACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: RQAAPPLRVASGSGT*AELPGVHCLRFTGS Trigger: AGATCCTGTGAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS TCA 90 bp | ATCCTGCTCCTGCCCTGTGAGATGACGCTCCTGTGCCTTCCACCATaGGTAAAAGCTCCCTGTGACCTCCCCAGGAGCAGCTGTCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: ILLLPCEMTLLCLPP*VKAPCDLPRSSCRH Trigger: ATGGCGACAGCTGCTCCTGGGGAGGTCACAGGGAGCTTTTACTCATGGTGGAAGGCACAGGAGCGTCATCTCACAGGGCAGGAGCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332990.6 |
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| CDS TCA 90 bp | CAGGCAGTAACCCAGCACGCTGGCCACACAGCCGTACGACACCCCTaGAGAGCTCATCAGGTTCAGCAAGGCATGAATCACAAGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QAVTQHAGHTAVRHP*RAHQVQQGMNHKAA Trigger: GGCTGCCTTGTGATTCATGCCTTGCTGAACCTGATGAGCTCTTCAGGGGTGTCGTACGGCTGTGTGGCCAGCGTGCTGGGTTACTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415895.9 ENST00000682193.1 |
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| CDS TCA 90 bp | TGCTCACCAGCTTGTTGTCTCTCTCTCGATCCTGCTCCTGCCCTGTaGGATGACGCTCCTGTGCCTTCCACCATGAGTAAAAGCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: CSPACCLSLDPAPAL*DDAPVPSTMSKSSL Trigger: CAGGGAGCTTTTACTCATGGTGGAAGGCACAGGAGCGTCATCTCACAGGGCAGGAGCAGGATCGAGAGAGAGACAACAAGCTGGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332990.6 |
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| CDS TCA 90 bp | TCCCAGTTGAGGCCACAGACATCACAGAAACAAGTCATTCCTGCCTaGCTTTCCCAAAGTGACCACTCCACTACCCGGCGCCAAGACGCG | + |
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Preference number: 5 (lower is better) Translates to: SQLRPQTSQKQVIPA*LSQSDHSTTRRQDA Trigger: CGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACTTTGGGAAAGTCAGGCAGGAATGACTTGTTTCTGTGATGTCTGTGGCCTCAACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS TCA 90 bp | ACAGACATCACAGAAACAAGTCATTCCTGCCTGACTTTCCCAAAGTaGCCACTCCACTACCCGGCGCCAAGACGCGCTGATGTCACGACA | + |
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Preference number: 5 (lower is better) Translates to: TDITETSHSCLTFPK*PLHYPAPRRADVTT Trigger: TGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACTTTGGGAAAGTCAGGCAGGAATGACTTGTTTCTGTGATGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS CCA 90 bp | AAGAGCTCATCAGGTTCAGCAAGGCATGAATCACAAGGCAGCCAATaGCACTCATGCCATACACATAACCAAACTGAACTTTTCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: KSSSGSARHESQGSQ*HSCHTHNQTELFLP Trigger: TGGCAGGAAAAGTTCAGTTTGGTTATGTGTATGGCATGAGTGCCATTGGCTGCCTTGTGATTCATGCCTTGCTGAACCTGATGAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415895.9 ENST00000682193.1 |
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| CDS GCA 90 bp | CAGCAATATCACAGAATATCTCATATCTGCACCCAATTTCCCCTATaGAAACATGCAACAAACTTCCAATGGTTTAAGGGTTTTGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QQYHRISHICTQFPL*KHATNFQWFKGFGS Trigger: TGAACCAAAACCCTTAAACCATTGGAAGTTTGTTGCATGTTTGCATAGGGGAAATTGGGTGCAGATATGAGATATTCTGTGATATTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000682988.1 ENST00000684034.1 |
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| CDS CCA 90 bp | CTGTTATGGGTACATCCTAAGGACAGACTCTATAAAGGTCAAAGATaGTTTCCTATGATGGTCAACAAAGCATTACTTGCTATAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LLWVHPKDRLYKGQR*FPMMVNKALLAIRN Trigger: ATTCCTTATAGCAAGTAATGCTTTGTTGACCATCATAGGAAACCATCTTTGACCTTTATAGAGTCTGTCCTTAGGATGTACCCATAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684034.1 |
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| CDS GCA 72 bp | TACCCGGCGCCAAGACGCGCTGATGTCACGACAGCGTaGGGCGTGCAGACGTCGGCAAGCTGCGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: YPAPRRADVTTA*GVQTSASCAAA Trigger: AGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 72 bp | CGCCAAGACGCGCTGATGTCACGACAGCGTGCGGCGTaGAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RQDALMSRQRAA*RRRQAAPPLRV Trigger: AACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 72 bp | GTGCAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTTaGTTCCGGATCTGGTACTTGGGCAGAGCTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VQTSASCAAASG*FRIWYLGRAPR Trigger: CCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS GCA 72 bp | GTCACGACAGCGTGCGGCGTGCAGACGTCGGCAAGCTaGGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: VTTACGVQTSAS*AAASGCFRIWY Trigger: GTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCTGTCGTGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CAA 72 bp | CGTGCAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTaGCTTCCGGATCTGGTACTTGGGCAGAGCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RADVGKLRRRFG*LPDLVLGQSSP Trigger: CGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CAA 90 bp | AGCGTGCGGCGTGCAGACGTCGGCAAGCTGCGCCGCCGCTTCGGGTaGCTTCCGGATCTGGTACTTGGGCAGAGCTCCCCGGGGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SVRRADVGKLRRRFG*LPDLVLGQSSPGFI Trigger: AATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGACGTCTGCACGCCGCACGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS TCA 72 bp | ATCGTGACCACTCCACTACCCGGCGCCAAGACGCGCTaGTGTCACGACAGCGTGCGGCGTGCAGACGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: IVTTPLPGAKTR*CHDSVRRADVG Trigger: GCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684496.1 |
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| CDS TCA 72 bp | AAAGTGACCACTCCACTACCCGGCGCCAAGACGCGCTaGTGTCACGACAGCGTGCGGCGTGCAGACGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: KVTTPLPGAKTR*CHDSVRRADVG Trigger: GCCGACGTCTGCACGCCGCACGCTGTCGTGACATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS CCA 72 bp | GCGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTACTTaGGCAGAGCTCCCCGGGGTTCATTGTCTTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: APPLRVASGSGT*AELPGVHCLRF Trigger: GAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CCA 72 bp | GCAAGCTGCGCCGCCGCTTCGGGTTGCTTCCGGATCTaGTACTTGGGCAGAGCTCCCCGGGGTTCATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ASCAAASGCFRI*YLGRAPRGSLS Trigger: AGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CAA 90 bp | TCGGCAAGCTGCGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTACTaGGGCAGAGCTCCCCGGGGTTCATTGTCTTCGCTTCACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SASCAAASGCFRIWY*GRAPRGSLSSLHRI Trigger: GATCCTGTGAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCAGCTTGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CAA 72 bp | TGCGCCGCCGCTTCGGGTTGCTTCCGGATCTGGTACTaGGGCAGAGCTCCCCGGGGTTCATTGTCTTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: CAAASGCFRIWY*GRAPRGSLSSL Trigger: AAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACCCGAAGCGGCGGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS TCA 72 bp | CTGCCCTGTGAGATGACGCTCCTGTGCCTTCCACCATaGGTAAAAGCTCCCTGTGACCTCCCCAGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPCEMTLLCLPP*VKAPCDLPRSS Trigger: GCTGCTCCTGGGGAGGTCACAGGGAGCTTTTACTCATGGTGGAAGGCACAGGAGCGTCATCTCACAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332990.6 |
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| CDS TCA 72 bp | ACCCAGCACGCTGGCCACACAGCCGTACGACACCCCTaGAGAGCTCATCAGGTTCAGCAAGGCATGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: TQHAGHTAVRHP*RAHQVQQGMNH Trigger: GTGATTCATGCCTTGCTGAACCTGATGAGCTCTTCAGGGGTGTCGTACGGCTGTGTGGCCAGCGTGCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415895.9 ENST00000682193.1 |
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| CDS CAA 90 bp | GGTTGCTTCCGGATCTGGTACTTGGGCAGAGCTCCCCGGGGTTCATaGTCTTCGCTTCACAGGATCTGTTTGAGTCCTGTCCACCGGATC | + |
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Preference number: 6 (lower is better) Translates to: GCFRIWYLGRAPRGS*SSLHRICLSPVHRI Trigger: GATCCGGTGGACAGGACTCAAACAGATCCTGTGAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCGGAAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS CAA 72 bp | CGGATCTGGTACTTGGGCAGAGCTCCCCGGGGTTCATaGTCTTCGCTTCACAGGATCTGTTTGAGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RIWYLGRAPRGS*SSLHRICLSPV Trigger: GACAGGACTCAAACAGATCCTGTGAAGCGAAGACAATGAACCCCGGGGAGCTCTGCCCAAGTACCAGATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508947.1 ENST00000684496.1 |
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| CDS TCA 72 bp | GCTTGTTGTCTCTCTCTCGATCCTGCTCCTGCCCTGTaGGATGACGCTCCTGTGCCTTCCACCATGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: ACCLSLDPAPAL*DDAPVPSTMSK Trigger: TTTACTCATGGTGGAAGGCACAGGAGCGTCATCTCACAGGGCAGGAGCAGGATCGAGAGAGAGACAACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332990.6 |
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| CDS TCA 72 bp | ACAGAAACAAGTCATTCCTGCCTGACTTTCCCAAAGTaGCCACTCCACTACCCGGCGCCAAGACGCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: TETSHSCLTFPK*PLHYPAPRRAD Trigger: ATCAGCGCGTCTTGGCGCCGGGTAGTGGAGTGGTCACTTTGGGAAAGTCAGGCAGGAATGACTTGTTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS TCA 72 bp | AGGCCACAGACATCACAGAAACAAGTCATTCCTGCCTaGCTTTCCCAAAGTGACCACTCCACTACCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPQTSQKQVIPA*LSQSDHSTTRR Trigger: GCGCCGGGTAGTGGAGTGGTCACTTTGGGAAAGTCAGGCAGGAATGACTTGTTTCTGTGATGTCTGTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS TCA 72 bp | GATTTTCAAGTCCCCAGCTGGTCGAGTCATCCCAGTTaGGGCCACAGACATCACAGAAACAAGTCATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: DFQVPSWSSHPS*GHRHHRNKSFL Trigger: CAGGAATGACTTGTTTCTGTGATGTCTGTGGCCTCAACTGGGATGACTCGACCAGCTGGGGACTTGAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS CCA 72 bp | TCAGGTTCAGCAAGGCATGAATCACAAGGCAGCCAATaGCACTCATGCCATACACATAACCAAACTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: SGSARHESQGSQ*HSCHTHNQTEL Trigger: AAGTTCAGTTTGGTTATGTGTATGGCATGAGTGCCATTGGCTGCCTTGTGATTCATGCCTTGCTGAACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415895.9 ENST00000682193.1 |
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| CDS CCA 72 bp | AGAAAATTGTTAGGAGGGCAAAAAGTCCATAAAGTATaGCACAAGGGTAGGCAACAAGAAGCTGCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RKLLGGQKVHKV*HKGRQQEAAVL Trigger: AAGGACAGCAGCTTCTTGTTGCCTACCCTTGTGCCATACTTTATGGACTTTTTGCCCTCCTAACAATTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415895.9 ENST00000684735.1 |
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| CDS GCA 72 bp | CACAGAATATCTCATATCTGCACCCAATTTCCCCTATaGAAACATGCAACAAACTTCCAATGGTTTAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: HRISHICTQFPL*KHATNFQWFKG Trigger: ACCCTTAAACCATTGGAAGTTTGTTGCATGTTTGCATAGGGGAAATTGGGTGCAGATATGAGATATTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000682988.1 ENST00000684034.1 |
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| CDS TCA 72 bp | AGATTGGTAAAAATCAGAGTCAAATTGTGCCAAGTTTaGCATCCTGAGATTGTGATGCTGAAGAGGCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RLVKIRVKLCQV*HPEIVMLKRLY Trigger: ATACAGCCTCTTCAGCATCACAATCTCAGGATGTCAAACTTGGCACAATTTGACTCTGATTTTTACCAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508947.1 |
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| CDS CCA 72 bp | GTACATCCTAAGGACAGACTCTATAAAGGTCAAAGATaGTTTCCTATGATGGTCAACAAAGCATTACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VHPKDRLYKGQR*FPMMVNKALLA Trigger: AGCAAGTAATGCTTTGTTGACCATCATAGGAAACCATCTTTGACCTTTATAGAGTCTGTCCTTAGGATGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684034.1 |
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| CDS CAA 90 bp | TTCCCCTATGCAAACATGCAACAAACTTCCAATGGTTTAAGGGTTTaGGTTCAGCAAACTCTTGTTATATGTGAAACAATCAAACATAAG | + |
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Preference number: 6 (lower is better) Translates to: FPYANMQQTSNGLRV*VQQTLVICETIKHK Trigger: CTTATGTTTGATTGTTTCACATATAACAAGAGTTTGCTGAACCAAAACCCTTAAACCATTGGAAGTTTGTTGCATGTTTGCATAGGGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000682988.1 ENST00000684034.1 |
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| CDS CCA 72 bp | CCTACAAAATTGACAAAGACATGTCATATTCTACTCTaGAAGTGGAGTAGAACACCATTTTTGAGATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PTKLTKTCHILL*KWSRTPFLRSV Trigger: AACTGATCTCAAAAATGGTGTTCTACTCCACTTCCAGAGTAGAATATGACATGTCTTTGTCAATTTTGTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000684034.1 |
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| CDS CAA 72 bp | GCAAACATGCAACAAACTTCCAATGGTTTAAGGGTTTaGGTTCAGCAAACTCTTGTTATATGTGAAACAATC | + |
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Preference number: 6 (lower is better) Translates to: ANMQQTSNGLRV*VQQTLVICETI Trigger: GATTGTTTCACATATAACAAGAGTTTGCTGAACCAAAACCCTTAAACCATTGGAAGTTTGTTGCATGTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682988.1 ENST00000684034.1 |
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