RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YIPF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130733

Ensembl transcript IDs: ENST00000253031.6, ENST00000585858.1, ENST00000586575.5, ENST00000586748.6, ENST00000587943.5, ENST00000588347.5, ENST00000588962.1, ENST00000589971.1, ENST00000590329.5, ENST00000591872.1, ENST00000592505.1, ENST00000592646.5

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTaGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCC +
Preference number: 1 (lower is better)
Translates to: WLQALGPEGRPLPAT*GRHRHLKDLSRKAS
Trigger: GGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR GCA 90 bp GTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTaGCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCAC +
Preference number: 1 (lower is better)
Translates to: VRAGGCRPWARREGH*RPLGADTDTSRICH
Trigger: GTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR CCA 90 bp AAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTaGGAGTGGGAGGGCAGCCCCCTTAGCCCAGCTGGGAATAGTCCT +
Preference number: 1 (lower is better)
Translates to: KKELSGSGPRTSRLD*EWEGSPLSPAGNSP
Trigger: AGGACTATTCCCAGCTGGGCTAAGGGGGCTGCCCTCCCACTCCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591872.1
3UTR-3UTR CCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGGGTGGCTGCAGGCCTTaGGCCCGGAGGGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGGGCRP*ARREGH
Trigger: GTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACC...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 2 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
3UTR-3UTR GCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 2 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
3UTR CAA 90 bp GTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTaGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTC +
Preference number: 2 (lower is better)
Translates to: VAAGLGPGGKATAGH*GQTQTPQGSVTEGV
Trigger: GACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR TCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGCAGTCCCTACTACTGTaGCGGCATTTCCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGQSLLL*RHFHPS
Trigger: GGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTG...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 2 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
3UTR-3UTR GCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGGTCCACTTAGGTGTTaGCTGTGGGACCCGGGCCTT +
Preference number: 2 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGGPLRC*LWDPGL
Trigger: AAGGCCCGGGTCCCACAGGCAACACCTAAGTGGACC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 2 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
3UTR-3UTR GCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 2 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
3UTR-3UTR GCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 2 (lower is better)
Translates to: GHCRPLGADTDTSRICHGSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR CCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
3UTR-3UTR CCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
3UTR-3UTR CCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTCCACTGCCGGCCACTTaGGGCAGACACAGACACCTC +
Preference number: 2 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPPLPAT*GRHRHL
Trigger: GAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGG...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR CCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: TQELEQVAAGLGPGGKATPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 2 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
3UTR-3UTR GCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGCCCGGGAAGGGACCTTaGAGGGACCTCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSPGKGP*RDLSLQ
Trigger: TTGGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGG...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTaGAGGGACCTCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLPGKGP*RDLSLQ
Trigger: TTGGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGG...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR CCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGCCCAAACTCAGATGCTaGAGCTCAGGCCCGCCGTGT +
Preference number: 2 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSPKLRC*SSGPPC
Trigger: ACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGGTCCACTTAGGTGTTaGCTGTGGGACCCGGGCCTT +
Preference number: 2 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLGPLRC*LWDPGL
Trigger: AAGGCCCGGGTCCCACAGGCAACACCTAAGTGGACC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTGGTCCACTTAGGTGTTaGCTGAAAGAAAGAATTGTC +
Preference number: 2 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCGPLRC*LKERIV
Trigger: GACAATTCTTTCTTTCAGGCAACACCTAAGTGGACC...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592646.5
3UTR-3UTR GCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTAATGAGGAAACGTGTTaGAGCACAGGCAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPNEETC*STGSFL
Trigger: AAGAAAACTGCCTGTGCTGCAACACGTTTCCTCATT...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR GCA 90 bp AGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTGGTCCACTTAGGTGTTaGCTGAAAGAAAGAATTGTC +
Preference number: 2 (lower is better)
Translates to: RCCLKERIVWEWPQNLSPGPLRC*LKERIV
Trigger: GACAATTCTTTCTTTCAGGCAACACCTAAGTGGACC...AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
3UTR GCA 72 bp GGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTaGCGGCCACTTGGGGCAGACACAGACACCTCAAGG +
Preference number: 3 (lower is better)
Translates to: GGCRPWARREGH*RPLGADTDTSR
Trigger: CCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR CCA 72 bp CCCCACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTaGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGG +
Preference number: 3 (lower is better)
Translates to: PHSRVRAGGCRP*ARREGHCRPLG
Trigger: CCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR-3UTR CAA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTAGGTGGCTGCAGGCCTaGGGCCCGGAGGGAAGGCCA +
Preference number: 3 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPRWLQA*GPEGRP
Trigger: TGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCT...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR CCA 72 bp GCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTaGGGCAGACACAGACACCTCAAGGATCTGTCACGG +
Preference number: 3 (lower is better)
Translates to: ALGPEGRPLPAT*GRHRHLKDLSR
Trigger: CCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
3UTR CCA 72 bp CATCTCAAGGTGTCAAAGGAGCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAGGGGTTGGTCCACTTA +
Preference number: 3 (lower is better)
Translates to: HLKVSKEPSVIV*GAGQAEGLVHL
Trigger: TAAGTGGACCAACCCCTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGGCTCCTTTGACACCTTGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGGCTCCTGGACACCCTTaGGCCACCGCAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGAPGHP*ATAGSP
Trigger: GGGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGC...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGAGGCCGGGGCAGCAGTaGGCCTTTGATCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGRPGQQ*AFDPVQ
Trigger: CTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCT...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp TCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTCCACGGGCCAGAGGGTaGATACCAGCCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SDAGAQARRVCTQAGAGAPRARG*IPARRL
Trigger: CAGCCGCCGGGCTGGTATTCACCCTCTGGCCCGTGG...AGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTGGCCCCATGCGCTCCTaGACACCCTTGCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCGPMRS*TPLRHR
Trigger: GCGGTGGCGCAAGGGTGTCCAGGAGCGCATGGGGCC...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTCCGCAGACCCTCTGTaGAGCCAGGCCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRSADPL*SQAGRA
Trigger: GGCCCGGCCGGCCTGGCTTCACAGAGGGTCTGCGGA...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGAGGGGGCCAGGGACTaGGGCAAGGTAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SDAGAQARRVCTQAGAGAEGARD*GKVGDS
Trigger: GCTGTCCCCTACCTTGCCGCAGTCCCTGGCCCCCTC...AGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCCTCGCTGAGGCCACCTaGGCCGGCGTGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSLAEAT*AGVAGA
Trigger: AGCCCCAGCCACGCCGGCCCAGGTGGCCTCAGCGAG...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253031.6
CDS-3UTR CCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGGGACAAAGGCCAACGTaGCACAGATCCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGGQRPT*HRSRRG
Trigger: GCCCCTTCTGGATCTGTGCCACGTTGGCCTTTGTCC...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGCATAGCAGTAGATGCTaGTGCCTGCCACGGTCACCT +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGHSSRC*CLPRSP
Trigger: AGGTGACCGTGGCAGGCATCAGCATCTACTGCTATG...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGCCACGGGCCAGAGGGTaGATACCAGCCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGPRARG*IPARRL
Trigger: CAGCCGCCGGGCTGGTATTCACCCTCTGGCCCGTGG...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGGGGAGTAGCCGTAGATaGACACAGTCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGGSSRR*TQSPGR
Trigger: CCTTCCTGGAGACTGTGTGCATCTACGGCTACTCCC...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTTCGGCCCCTGCCTCTTaGTGCTGTCCTGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SDAGAQARRVCTQAGAGASAPAS*CCPVPE
Trigger: CTCGGGGACAGGACAGCAGCAAGAGGCAGGGGCCGA...AGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGGCCCCATGCGCTCCTaGACACCCTTGCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGGPMRS*TPLRHR
Trigger: GCGGTGGCGCAAGGGTGTCCAGGAGCGCATGGGGCC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGCCCCATGCGCTCCTaGACACCCTTGCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSGPMRS*TPLRHR
Trigger: GCGGTGGCGCAAGGGTGTCCAGGAGCGCATGGGGCC...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGCCACGGGCCAGAGGGTaGATACCAGCCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPPRARG*IPARRL
Trigger: CAGCCGCCGGGCTGGTATTCACCCTCTGGCCCGTGG...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR TCA 90 bp GCCGGGCCGAGCCAGCAGCCCCTCTCCCTAGACTCAGAGGCGCCGCGGGGAGGGGGTTCACCTCACACTTaGATGTACAACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: AGPSQQPLSLDSEAPRGGGSPHT*MYNPPH
Trigger: GTGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACC...CCCTCCCCGCGGCGCCTCTGAGTCTAGGGAGAGGGGCTGCTGGCTCGGCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCGTGGCTGGGGCTCTCTaGGCCTGCGCGTCTCGCCTA +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLVAGAL*ACASRL
Trigger: TAGGCGAGACGCGCAGGCGCAGAGAGCCCCAGCCAC...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253031.6
CDS-3UTR GCA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTTGCTGCTGCTGCTCCTaGAGGAGCGCGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCCCCCS*RSAALS
Trigger: TGACAAGGCCGCGCTCCTGCAGGAGCAGCAGCAGCA...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCTGCTGCTGCTGCTGCTaGTCCTGCAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLCCCCC*SCRSAA
Trigger: GGCCGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCA...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGTGCTGCTGCTGCTGCTaGTCCTGCAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERCCCCC*SCRSAA
Trigger: GGCCGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCA...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCGGCTGCTGCTGCTGCTaGTGCTCCTGCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSGCCCC*CSCRSA
Trigger: CGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCAGCC...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGCTCCTGGACACCCTTaGGCCACCGCAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGAPGHP*ATAGSP
Trigger: GGGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGCTCCTGGACACCCTTaGGCCACCGCAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSAPGHP*ATAGSP
Trigger: GGGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGC...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGAGGGGGCCAGGGACTaGGGCAAGGTAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESREGARD*GKVGDS
Trigger: GCTGTCCCCTACCTTGCCGCAGTCCCTGGCCCCCTC...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCCGGAGGGAAGGCCACTaGCGGCCACTTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSRREGH*RPLGAD
Trigger: GTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCG...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCCCCTGCCTCTTGCTaGTGTCCTGTCCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERAPASC*CPVPEP
Trigger: GGGCTCGGGGACAGGACAGCAGCAAGAGGCAGGGGC...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGGCCTCCTCGAATTCATaGAAGGTCAGCTCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGASSNS*KVSSSA
Trigger: GGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGC...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGAGGGGTCCCTCCTCTaGGCCAGCACCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESREGSLL*ASTSVR
Trigger: CCTGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTC...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
CDS-3UTR CCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGTCACCTGAGGCCACCTaGGCCGGCGTGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPSPEAT*AGVAGA
Trigger: AGCCCCAGCCACGCCGGCCCAGGTGGCCTCAGGTGA...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586748.6
CDS-3UTR TCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCTCCATAGCTGCCACCTaGGCCCACGGCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSSIAAT*AHGHSH
Trigger: GTGGCTGTGGCCGTGGGCTCAGGTGGCAGCTATGGA...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGCACCCACGGAGGCTTaGACTCGTCGTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPAPTEA*TRRPVP
Trigger: GGGGACGGGACGACGAGTTCAAGCCTCCGTGGGTGC...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCACAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAQLVGR*HGRSGA
Trigger: CGCCCCTGAACGACCATGGCATCGGCCGACGAGCTG...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGTCAGCTGATCGCTTCTaGTGGTGGTGGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGSADRF*WWWLHL
Trigger: CAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGA...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGAGGGGGCCAGGGACTaGGGCAAGGTAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPEGARD*GKVGDS
Trigger: GCTGTCCCCTACCTTGCCGCAGTCCCTGGCCCCCTC...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCCGGAGGGAAGGCCACTaGCGGCCACTTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPRREGH*RPLGAD
Trigger: GTCTGCCCCAAGTGGCCGGCAGTGGCCTTCCCTCCG...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGTTAGAGCAGGTGGCTaGAGGCCTTGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERVRAGG*RPWARR
Trigger: CCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAAC...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGAGATGTGATTTGGGGTaGAGGAGCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGRCDLG*RSHVLR
Trigger: CCGGAGAACGTGGCTCCTCCACCCCAAATCACATCT...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAGGTGGCTGCAGGCCTTaGGCCCGGAGGGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHCRPLGADTDTSRICHGGGCRP*ARREGH
Trigger: GTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACC...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTGGTGGCTGCAGGCCTTaGGCCCGGAGGGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPGGCRP*ARREGH
Trigger: GTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACC...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGCGTCAGGTTGCCAGTaGCGGCCAGGACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRASGCQ*RPGQRP
Trigger: TGGCCTTTGTCCTGGCCGTCACTGGCAACCTGACGC...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCGCCAAGGCACAGGGATaGGCCACAGGACCACCATGG +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSAKAQG*ATGPPW
Trigger: CCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTGGC...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGCCAAGGCACAGGGATaGGCCACAGGACCACCATGG +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRAKAQG*ATGPPW
Trigger: CCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTGGC...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGGCTGCTGCTGCTGCTaGTGCTCCTGCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: TQELEQVAAGLGPGGKATGCCCC*CSCRSA
Trigger: CGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCAGCC...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCGTCCAGAATCCCGGCTaGTGCTGCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLVQNPG*CCCCCS
Trigger: GGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGAC...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGAGCTCCCTGCTCGGCTaGCCCTCGCCCGCCTTTATA +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRSSLLG*PSPAFI
Trigger: TATAAAGGCGGGCGAGGGGCAGCCGAGCAGGGAGCT...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGATGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: GHCRPLGADTDTSRICHGCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCACCCCCAAACTCAGATaGTGGAGCTCAGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSTPKLR*WSSGPP
Trigger: CGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGGGGT...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAACCCCCAAACTCAGATaGTGGAGCTCAGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKATPKLR*WSSGPP
Trigger: CGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGGGGT...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCATCCGTCCTCGGCCCCTaGCTCTTGCTGCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKASVLGP*LLLLSC
Trigger: ACAGGACAGCAGCAAGAGGCAGGGGCCGAGGACGGA...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTGCCTCCTCGAATTCATaGAAGGTCAGCTCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCASSNS*KVSSSA
Trigger: GGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGC...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGCGGACAGCAGCACTGTaGCCACCAGCCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRRTAAL*PPAWCP
Trigger: AGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCG...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGCGGACAGCAGCACTGTaGCCACCAGCCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERRTAAL*PPAWCP
Trigger: AGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCG...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGAC +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPMARRA*SSTTTD
Trigger: GTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCAT...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGAC +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPMARRA*SSTTTD
Trigger: GTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCAT...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGCCACTGCCGGCCACTTaGGGCAGACACAGACACCTC +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERPLPAT*GRHRHL
Trigger: GAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGG...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTGCAGCAGTGAGCCTTTaGTCCGGTCCAGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: RHFHPSPAREGTLQGPLPAAVSL*SGPGPV
Trigger: CACAGGTCCTGGACCGGATCAAAGGCTCACTGCTGC...AGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTAGGCCGGGGCAGCAGTaGGCCTTTGATCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TQELEQVAAGLGPGGKATRPGQQ*AFDPVQ
Trigger: CTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCT...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTGGACCACCATGGGGATaGAGACAAAGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCGPPWG*RQRGSS
Trigger: GCTACTCCCTCTTTGTCTTCATCCCCATGGTGGTCC...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp TCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTCAGTCCCTACTACTGTaGCGGCATTTCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: SDAGAQARRVCTQAGAGAQSLLL*RHFHPS
Trigger: GGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTG...AGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGGGGCTCTCTGCGCCTaGGCGTCTCGCCTACCCGTC +
Preference number: 4 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSGALCA*ASRLPV
Trigger: GACGGGTAGGCGAGACGCGCAGGCGCAGAGAGCCCC...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253031.6
CDS-3UTR GCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCTCTGCTGGTGGTGGCTaGATCTGGGGTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSSAGGG*IWGVSQ
Trigger: CTGGCTGACACCCCAGATGCAGCCACCACCAGCAGA...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGAATCCCGGCTGCTGCTaGTGCTGCTGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWNPGCC*CCCSCR
Trigger: CCTGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATT...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCAGGTGTAGGGCCCCATaGGCTCCTGGACACCCTTGC +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPRCRAP*APGHPC
Trigger: GCAAGGGTGTCCAGGAGCGCATGGGGCCCTACACCT...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAAPKSH*SQGTGM
Trigger: CATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSAPKSH*SQGTGM
Trigger: CATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGC...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTCCACTTAGGTGTTaGCTGTGGGACCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAGPLRC*LWDPGL
Trigger: AAGGCCCGGGTCCCACAGGCAACACCTAAGTGGACC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
CDS-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCACCCCCAAACTCAGATaGTGGAGCTCAGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPTPKLR*WSSGPP
Trigger: CGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGGGGT...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTTTCCATCCCTCCCCTaGCCGGGAAGGGACCTTGCA +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRFPSLP*PGRDLA
Trigger: TGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAA...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCGCTTCTGCTGGTGGTaGCTGCATCTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RHFHPSPAREGTLQGPLPRFCWW*LHLGCQ
Trigger: CTGACACCCCAGATGCAGCCACCACCAGCAGAAGCG...AGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGCTGATCGCTTCTGCTaGTGGTGGCTGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGADRFC*WWLHLG
Trigger: CCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCTGATCGCTTCTGCTaGTGGTGGCTGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERADRFC*WWLHLG
Trigger: CCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGC...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCGGACAGCAGCACTGTaGCCACCAGCCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWRTAAL*PPAWCP
Trigger: AGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCG...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCCCAAACTCAGATGCTaGAGCTCAGGCCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLPKLRC*SSGPPC
Trigger: ACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCCCCAAACTCAGATGCTaGAGCTCAGGCCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: AFPSLPCPGRDLAGTSPSPKLRC*SSGPPC
Trigger: ACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG...GGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCCCCAAACTCAGATGCTaGAGCTCAGGCCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSPKLRC*SSGPPC
Trigger: ACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCCTCCGCATCCCTCGCTaGGGCCACCTGGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPLRIPR*GHLGRR
Trigger: ACGCCGGCCCAGGTGGCCTCAGCGAGGGATGCGGAG...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253031.6
CDS-3UTR TCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCCCGGTCCAGGACCTGTaGGGTGTCCACGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSPVQDL*GVHVKE
Trigger: TTCTTTGACGTGGACACCTCACAGGTCCTGGACCGG...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGCCCGCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VDAPVPTTVTAFPSLPCPQLVGR*HGRSGA
Trigger: CGCCCCTGAACGACCATGGCATCGGCCGACGAGCTG...CGGGCAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGTCCAGAATCCCGGCTaGTGCTGCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TQELEQVAAGLGPGGKATVQNPG*CCCCCS
Trigger: GGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGAC...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTAGGTGTAGGGCCCCATaGGCTCCTGGACACCCTTGC +
Preference number: 4 (lower is better)
Translates to: TQELEQVAAGLGPGGKATRCRAP*APGHPC
Trigger: GCAAGGGTGTCCAGGAGCGCATGGGGCCCTACACCT...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TACTGTGACGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCCCGGGAAGGGACCTTaGAGGGACCTCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: YCDGISIPPLPGKGPCRDPGKGP*RDLSLQ
Trigger: TTGGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGG...GTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCCGTCACAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGATCCGTCCTCGGCCCCTaGCTCTTGCTGCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GHCRPLGADTDTSRICHGSVLGP*LLLLSC
Trigger: ACAGGACAGCAGCAAGAGGCAGGGGCCGAGGACGGA...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGATCGCTTCTGCTGGTaGTGGCTGCATCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKADRFCW*WLHLGC
Trigger: ACACCCCAGATGCAGCCACCACCAGCAGAAGCGATC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ACTCAAGAGTTAGAGCAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTTGCCGCACAAAGTTGTaGCCAGGCCGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TQELEQVAAGLGPGGKATCRTKL*PGRGSS
Trigger: ACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCA...AGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAACTCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTTGCCGCACAAAGTTGTaGCCAGGCCGGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPCRTKL*PGRGSS
Trigger: ACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCA...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGCCGATTCCGCAGATaGTGCCGCACAAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSGRFRR*CRTKLW
Trigger: CCACAACTTTGTGCGGCACCATCTGCGGAATCGGCC...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGGCCGATTCCGCAGATaGTGCCGCACAAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGGRFRR*CRTKLW
Trigger: CCACAACTTTGTGCGGCACCATCTGCGGAATCGGCC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGAGGGGTCCCTCCTCTaGGCCAGCACCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLEGSLL*ASTSVR
Trigger: CCTGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTC...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGAGGGGTCCCTCCTCTaGGCCAGCACCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSEGSLL*ASTSVR
Trigger: CCTGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTC...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCTTAGGTGTTGCCTGTaGGACCCGGGCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWLRCCL*DPGLPR
Trigger: CCTAGGAAGGCCCGGGTCCCACAGGCAACACCTAAG...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
CDS-3UTR TCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCCCGGTCCAGGACCTGTaGGGTGTCCACGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPPVQDL*GVHVKE
Trigger: TTCTTTGACGTGGACACCTCACAGGTCCTGGACCGG...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCATAGCAGTAGATGCTaGTGCCTGCCACGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLHSSRC*CLPRSP
Trigger: AGGTGACCGTGGCAGGCATCAGCATCTACTGCTATG...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CCCAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCCATAGCAGTAGATGCTaGTGCCTGCCACGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PKLRCWSSGPPCVHPGRSHSSRC*CLPRSP
Trigger: AGGTGACCGTGGCAGGCATCAGCATCTACTGCTATG...GCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGGACCACCATGGGGATaGAGACAAAGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERGPPWG*RQRGSS
Trigger: GCTACTCCCTCTTTGTCTTCATCCCCATGGTGGTCC...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGACCACCATGGGGATaGAGACAAAGAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAGPPWG*RQRGSS
Trigger: GCTACTCCCTCTTTGTCTTCATCCCCATGGTGGTCC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR TCA 90 bp CCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTGGGCCACGGGCCAGAGGGTaGATACCAGCCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PERKNCLGVAPEPLALTGPRARG*IPARRL
Trigger: CAGCCGCCGGGCTGGTATTCACCCTCTGGCCCGTGG...CCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR GCA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCTCAGCTGATCGCTTCTaGTGGTGGTGGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLSADRF*WWWLHL
Trigger: CAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGA...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGCCCGTGCTGCTGCTGCTCCTaGAGGAGCGCGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VDAPVPTTVTAFPSLPCPCCCCS*RSAALS
Trigger: TGACAAGGCCGCGCTCCTGCAGGAGCAGCAGCAGCA...CGGGCAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCACGATTCCGCAGATGGTaGCGCACAAAGTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKARFRRW*RTKLWP
Trigger: TGGCCACAACTTTGTGCGGCACCATCTGCGGAATCG...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGCTCCTGGACACCCTTaGGCCACCGCAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLAPGHP*ATAGSP
Trigger: GGGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGGGAGTAGCCGTAGATaGACACAGTCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGGSSRR*TQSPGR
Trigger: CCTTCCTGGAGACTGTGTGCATCTACGGCTACTCCC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGGGAGTAGCCGTAGATaGACACAGTCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRGSSRR*TQSPGR
Trigger: CCTTCCTGGAGACTGTGTGCATCTACGGCTACTCCC...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: GHCRPLGADTDTSRICHGAPKSH*SQGTGM
Trigger: CATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGC...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTGGTCCACTTAGGTGTTaGCTGTGGGACCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPGPLRC*LWDPGL
Trigger: AAGGCCCGGGTCCCACAGGCAACACCTAAGTGGACC...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGCCCCTGCCTCTTGCTaGTGTCCTGTCCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLAPASC*CPVPEP
Trigger: GGGCTCGGGGACAGGACAGCAGCAAGAGGCAGGGGC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTTCGCTGGCGACCAACTaGACCCACGGAGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPSLATN*THGGLN
Trigger: GTTCAAGCCTCCGTGGGTGCAGTTGGTCGCCAGCGA...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586748.6
CDS-3UTR CCA 90 bp CGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTGGTGGTGGCTGCATCTaGGGTGTCAGCCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: RHFHPSPAREGTLQGPLPGGGCI*GVSQKI
Trigger: AATCTTCTGGCTGACACCCCAGATGCAGCCACCACC...AGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGTGGCTGCATCTaGGGTGTCAGCCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAGGGCI*GVSQKI
Trigger: AATCTTCTGGCTGACACCCCAGATGCAGCCACCACC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GGCCACTGCCGGCCACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGACGCTTCTGCTGGTGGTaGCTGCATCTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GHCRPLGADTDTSRICHGRFCWW*LHLGCQ
Trigger: CTGACACCCCAGATGCAGCCACCACCAGCAGAAGCG...TCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGAGCCACGTGCCCTTGTaGGGTCAGCTGATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWSHVPL*GQLIAS
Trigger: AGAAGCGATCAGCTGACCCCACAAGGGCACGTGGCT...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGAC +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLMARRA*SSTTTD
Trigger: GTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCAT...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGAGATGTGATTTGGGGTaGAGGAGCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERRCDLG*RSHVLR
Trigger: CCGGAGAACGTGGCTCCTCCACCCCAAATCACATCT...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp CCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGAGATGTGATTTGGGGTaGAGGAGCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PPPWLSLLFQGSHRRESRRCDLG*RSHVLR
Trigger: CCGGAGAACGTGGCTCCTCCACCCCAAATCACATCT...CCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAAGATGTGATTTGGGGTaGAGGAGCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKARCDLG*RSHVLR
Trigger: CCGGAGAACGTGGCTCCTCCACCCCAAATCACATCT...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp TACTGTGACGGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YCDGISIPPLPGKGPCRDPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...GTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCCGTCACAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp GTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGCCCGCCACTGCCGGCCACTTaGGGCAGACACAGACACCTC +
Preference number: 4 (lower is better)
Translates to: VDAPVPTTVTAFPSLPCPPLPAT*GRHRHL
Trigger: GAGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGG...CGGGCAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCCTCCGCATCCCTCGCTaGCGACCAACTGCACCCACG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLLRIPR*RPTAPT
Trigger: CGTGGGTGCAGTTGGTCGCCAGCGAGGGATGCGGAG...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586748.6
CDS-3UTR TCA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGAGCTCTGATAGTAGCTaGAGGTCCAGAATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QTQMLELRPAVCAPRQERSSDSS*RSRIPA
Trigger: AGCCGGGATTCTGGACCTTCAGCTACTATCAGAGCT...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGCCAAGGCACAGGGATaGGCCACAGGACCACCATGG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLAKAQG*ATGPPW
Trigger: CCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTGGC...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGAATCCCGGCTGCTGCTaGTGCTGCTGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSNPGCC*CCCSCR
Trigger: CCTGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATT...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGAGTAGCCGTAGATaGACACAGTCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPGSSRR*TQSPGR
Trigger: CCTTCCTGGAGACTGTGTGCATCTACGGCTACTCCC...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR GCA 90 bp CAGGTGGCTGCAGGCCTTGGGCCCGGAGGGAAGGCCACTGCCGGCCACTTGGGGAATGAGGAAACGTGTTaGAGCACAGGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QVAAGLGPGGKATAGHLGNEETC*STGSFL
Trigger: AAGAAAACTGCCTGTGCTGCAACACGTTTCCTCATT...CCCCAAGTGGCCGGCAGTGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGTTAGAGCAGGTGGCTaGAGGCCTTGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLVRAGG*RPWARR
Trigger: CCTCCGGGCCCAAGGCCTGCAGCCACCTGCTCTAAC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp AGGGTTCACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVHLTLECTTHPTVGKASRRPMP*SFRGVS
Trigger: GGAGACGCCCCTGAACGACCATGGCATCGGCCGACG...GGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCCTTTTTCGGCCCCATGCGCTCCTaGACACCCTTGCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: TWGRHRHLKDLSRKASFFGPMRS*TPLRHR
Trigger: GCGGTGGCGCAAGGGTGTCCAGGAGCGCATGGGGCC...GAAAAAGGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCCCTTGTGGGGTCAGCTaGTCGCTTCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLPCGVS*SLLLVV
Trigger: CACCACCAGCAGAAGCGATCAGCTGACCCCACAAGG...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGACAGCGCGATGTTTaGGGGCAGAGATGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPGQRDV*GQRCDL
Trigger: CAAATCACATCTCTGCCCTCAAACATCGCGCTGTCC...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR TCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGGGTTCACCTCACACTTaGATGTACAACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWGSPHT*MYNPPH
Trigger: GTGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACC...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGGTAGATGCTGATGCCTaGCACGGTCACCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWVDADA*HGHLVE
Trigger: TTCCACAAGGTGACCGTGGCAGGCATCAGCATCTAC...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGTAGATGCTGATGCCTaGCACGGTCACCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPVDADA*HGHLVE
Trigger: TTCCACAAGGTGACCGTGGCAGGCATCAGCATCTAC...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp AGGGTTCACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCAGGTGTAGGGCCCCATaGGCTCCTGGACACCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVHLTLECTTHPTVGKASRCRAP*APGHPC
Trigger: GCAAGGGTGTCCAGGAGCGCATGGGGCCCTACACCT...GGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp AGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTGAGGGGGCCAGGGACTaGGGCAAGGTAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RCCLKERIVWEWPQNLSPEGARD*GKVGDS
Trigger: GCTGTCCCCTACCTTGCCGCAGTCCCTGGCCCCCTC...AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR GCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGTCCACTTAGGTGTTaGCTGTGGGACCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLGPLRC*LWDPGL
Trigger: AAGGCCCGGGTCCCACAGGCAACACCTAAGTGGACC...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCTTTCCATCCCTCCCCTaGCCGGGAAGGGACCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLFPSLP*PGRDLA
Trigger: TGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAA...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPRRPMP*SFRGVS
Trigger: GGAGACGCCCCTGAACGACCATGGCATCGGCCGACG...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGTCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAG +
Preference number: 4 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGSGGSD*KKYNLQ
Trigger: CTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGA...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCATCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAG +
Preference number: 4 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKASGGSD*KKYNLQ
Trigger: CTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGA...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGCTTAGGTGTTGCCTGTaGGACCCGGGCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSLRCCL*DPGLPR
Trigger: CCTAGGAAGGCCCGGGTCCCACAGGCAACACCTAAG...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCCTTAGGTGTTGCCTGTaGGACCCGGGCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLLRCCL*DPGLPR
Trigger: CCTAGGAAGGCCCGGGTCCCACAGGCAACACCTAAG...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp AGGGTTCACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCCCTTGTGGGGTCAGCTaGTCGCTTCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVHLTLECTTHPTVGKASPCGVS*SLLLVV
Trigger: CACCACCAGCAGAAGCGATCAGCTGACCCCACAAGG...GGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCGCGTCAGGTTGCCAGTaGCGGCCAGGACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGASGCQ*RPGQRP
Trigger: TGGCCTTTGTCCTGGCCGTCACTGGCAACCTGACGC...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp CACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCCCTGGACAGCGCGATGTTTaGGGGCAGAGATGTGATTTG +
Preference number: 4 (lower is better)
Translates to: HLNVQPTPLSGRPPSSAPGQRDV*GQRCDL
Trigger: CAAATCACATCTCTGCCCTCAAACATCGCGCTGTCC...AGGGGCCGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp ACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCCTTTTTCCCTCGGCTCCATAGCTaGCACCTGAGCCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TWGRHRHLKDLSRKASFFPRLHS*HLSPRP
Trigger: TGGCCGTGGGCTCAGGTGGCAGCTATGGAGCCGAGG...GAAAAAGGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCAGGTGTAGGGCCCCATaGGCTCCTGGACACCCTTGC +
Preference number: 4 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGRCRAP*APGHPC
Trigger: GCAAGGGTGTCCAGGAGCGCATGGGGCCCTACACCT...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCCCCGGGAAGGGACCTTaGAGGGACCTCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPPGKGP*RDLSLQ
Trigger: TTGGAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGG...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGATCGCTTCTGCTGGTaGTGGCTGCATCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSDRFCW*WLHLGC
Trigger: ACACCCCAGATGCAGCCACCACCAGCAGAAGCGATC...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCAGCCACGTGCCCTTGTaGGGTCAGCTGATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLSHVPL*GQLIAS
Trigger: AGAAGCGATCAGCTGACCCCACAAGGGCACGTGGCT...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGACAAAGGCCAACGTaGCACAGATCCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HLTLECTTHPTVGKASVLGQRPT*HRSRRG
Trigger: GCCCCTTCTGGATCTGTGCCACGTTGGCCTTTGTCC...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTGGGCGGACAGCAGCACTGTaGCCACCAGCCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PERKNCLGVAPEPLALTGRTAAL*PPAWCP
Trigger: AGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCG...CCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR CCA 90 bp AGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTCGCCTTGACTGGGAGTaGGAGGGCAGCCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: RCCLKERIVWEWPQNLSPRLDWE*EGSPLS
Trigger: GCTAAGGGGGCTGCCCTCCCACTCCCAGTCAAGGCG...AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR TCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCGCAGCAGTGAGCCTTTaGTCCGGTCCAGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGAAVSL*SGPGPV
Trigger: CACAGGTCCTGGACCGGATCAAAGGCTCACTGCTGC...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGAPKSH*SQGTGM
Trigger: CATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGC...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp CTTAGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGAC +
Preference number: 4 (lower is better)
Translates to: LRCCLKERIVWEWPQNLSMARRA*SSTTTD
Trigger: GTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCAT...CGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR CCA 90 bp CCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTGGGCCTTCAGTCATCGTCTaGGGGGCAGGACAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PERKNCLGVAPEPLALTGPSVIV*GAGQAE
Trigger: CTCTGCCTGTCCTGCCCCCCAGACGATGACTGAAGG...CCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR TCA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGGACAGCGCGATGTTTaGGGGCAGAGATGTGATTTG +
Preference number: 4 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLGQRDV*GQRCDL
Trigger: CAAATCACATCTCTGCCCTCAAACATCGCGCTGTCC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCCAGTCCCTACTACTGTaGCGGCATTTCCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPQSLLL*RHFHPS
Trigger: GGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTG...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCCGATTCCGCAGATGGTaGCGCACAAAGTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGRFRRW*RTKLWP
Trigger: TGGCCACAACTTTGTGCGGCACCATCTGCGGAATCG...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGGGTCCACTTAGGTGTTaGCTGAAAGAAAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWGPLRC*LKERIV
Trigger: GACAATTCTTTCTTTCAGGCAACACCTAAGTGGACC...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592646.5
CDS-3UTR GCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCGTAGATGCTGATGCCTaGCACGGTCACCTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPVDADA*HGHLVE
Trigger: TTCCACAAGGTGACCGTGGCAGGCATCAGCATCTAC...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp AGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTAGAATTGTCTGGGAGTaGCCCCAGAACCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RCCLKERIVWEWPQNLSPRIVWE*PQNLSP
Trigger: AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCT...AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR TCA 90 bp ACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCCTTTTTCAGCTCTGATAGTAGCTaGAGGTCCAGAATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TWGRHRHLKDLSRKASFFSSDSS*RSRIPA
Trigger: AGCCGGGATTCTGGACCTTCAGCTACTATCAGAGCT...GAAAAAGGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR TCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCTCCGCAGACCCTCTGTaGAGCCAGGCCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVSADPL*SQAGRA
Trigger: GGCCCGGCCGGCCTGGCTTCACAGAGGGTCTGCGGA...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAG +
Preference number: 4 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPSGGSD*KKYNLQ
Trigger: CTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGA...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp CTTAGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGAGATGTGATTTGGGGTaGAGGAGCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LRCCLKERIVWEWPQNLSRCDLG*RSHVLR
Trigger: CCGGAGAACGTGGCTCCTCCACCCCAAATCACATCT...CGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR CCA 90 bp CTTAGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGAATAGTCCTTACCTGTaGGACCCGGGCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LRCCLKERIVWEWPQNLSNSPYL*DPGLPR
Trigger: CCTAGGAAGGCCCGGGTCCCACAGGTAAGGACTATT...CGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR TCA 90 bp CTTAGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGGGACAGCGCGATGTTTaGGGGCAGAGATGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LRCCLKERIVWEWPQNLSGQRDV*GQRCDL
Trigger: CAAATCACATCTCTGCCCTCAAACATCGCGCTGTCC...CGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR CCA 90 bp ACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCCTTTTTCTCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAG +
Preference number: 4 (lower is better)
Translates to: TWGRHRHLKDLSRKASFFSGGSD*KKYNLQ
Trigger: CTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGA...GAAAAAGGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp AGGTGTTGCCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAG +
Preference number: 4 (lower is better)
Translates to: RCCLKERIVWEWPQNLSPSGGSD*KKYNLQ
Trigger: CTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGA...AGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGGCAACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR GCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCTGTCCCAAAGCTCCCTaGTCGGCTGCCCCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVCPKAP*SAAPRP
Trigger: CGGGCGAGGGGCAGCCGAGCAGGGAGCTTTGGGACA...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR TCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCTCCATAGCTGCCACCTaGGCCCACGGCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVSIAAT*AHGHSH
Trigger: GTGGCTGTGGCCGTGGGCTCAGGTGGCAGCTATGGA...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCTCGGCCCCTGCCTCTTaGTGCTGTCCTGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVSAPAS*CCPVPE
Trigger: CTCGGGGACAGGACAGCAGCAAGAGGCAGGGGCCGA...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR GCA 90 bp CCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTGGGGGTCCACTTAGGTGTTaGCTGAAAGAAAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: PERKNCLGVAPEPLALTGGPLRC*LKERIV
Trigger: GACAATTCTTTCTTTCAGGCAACACCTAAGTGGACC...CCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR TCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCGCCAAGGCACAGGGATaGGCCACAGGACCACCATGG +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVAKAQG*ATGPPW
Trigger: CCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTGGC...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR GCA 90 bp ACTTGGGGCAGACACAGACACCTCAAGGATCTGTCACGGAAGGCGTCCTTTTTCAATGAGGAAACGTGTTaGAGCACAGGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TWGRHRHLKDLSRKASFFNEETC*STGSFL
Trigger: AAGAAAACTGCCTGTGCTGCAACACGTTTCCTCATT...GAAAAAGGACGCCTTCCGTGACAGATCCTTGAGGTGTCTGTGTCTGCCCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCCGGACAGCAGCACTGTaGCCACCAGCCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVRTAAL*PPAWCP
Trigger: AGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCG...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CCA 90 bp AGTGTTTGCTTTGTAAGAAAAGTCTGGAAAGTAGCAGAATCATCTCAAGGTGTCAGAAAGAATTGTCTGTaGGACCCGGGCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SVCFVRKVWKVAESSQGVRKNCL*DPGLPR
Trigger: CCTAGGAAGGCCCGGGTCCCACAGACAATTCTTTCT...GACACCTTGAGATGATTCTGCTACTTTCCAGACTTTTCTTACAAAGCAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592646.5
CDS-3UTR CAA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTCGCTCCTGGACACCCTaGCGCCACCGCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCRSWTP*RHRRKP
Trigger: GGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGCG...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CAA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTAGGTGGCTGCAGGCCTaGGGCCCGGAGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCRWLQA*GPEGRP
Trigger: TGGCCTTCCCTCCGGGCCCAAGGCCTGCAGCCACCT...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS GCA 90 bp AGCCCGGCGGCTGACAGGCCCAGGGCCAGCGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATGAGCCACAGGACCACCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: SPAADRPRASAPKSH*SQGTGMSHRTTMGM
Trigger: CATCCCCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000589971.1
ENST00000590329.5
ENST00000592646.5
CDS CCA 90 bp TGGGTCAGCTGGGGGCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: WVSWGHGRSARRPMP*SFRGVSASLAEATW
Trigger: CCAGGTGGCCTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGCCCCCAGCTGACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587943.5
CDS-3UTR CAA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTCACAGCCACGTGCCCTaGTGGGGTCAGCTGATCGCT +
Preference number: 5 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCHSHVP*WGQLIA
Trigger: AGCGATCAGCTGACCCCACAAGGGCACGTGGCTGTG...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp CCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCCGCTCCTGGACACCCTaGCGCCACCGCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PWLSLLFQGSHRRESRWPRSWTP*RHRRKP
Trigger: GGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGCG...GGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS-3UTR CAA 90 bp GGCATTTCCATCCCTCCCCTGCCCGGGAAGGGACCTTGCAGGGACCTCTCCCTCCTCGGCCCCTGCCTCTaGCTGCTGTCCTGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: GISIPPLPGKGPCRDLSLLGPCL*LLSCPR
Trigger: TCGGGGACAGGACAGCAGCAAGAGGCAGGGGCCGAG...GAGGGAGAGGTCCCTGCAAGGTCCCTTCCCGGGCAGGGGAGGGATGGAAATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp AGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGTGGCAGCAGTGAGCCTTaGATCCGGTCCAGGACCTGT +
Preference number: 5 (lower is better)
Translates to: RCWSSGPPCVHPGRSGRCGSSEP*IRSRTC
Trigger: ACAGGTCCTGGACCGGATCAAAGGCTCACTGCTGCC...ACAGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp CTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGCTCGGCCCCTGCCTCTaGCTGCTGTCCTGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: LGSPSCSRGAIGGKAGGPLGPCL*LLSCPR
Trigger: TCGGGGACAGGACAGCAGCAAGAGGCAGGGGCCGAG...CGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCATGCACCCACGGAGGCTaGAACTCGTCGTCCCGTCCC +
Preference number: 5 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKACTHGG*NSSSRP
Trigger: GGGACGGGACGACGAGTTCAAGCCTCCGTGGGTGCA...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586748.6
CDS TCA 90 bp CCGCAGATGGTGCCGCACAAAGTTGTGGCCAGGCCGGGGCAGCAGTaGGCCTTTGATCCGGTCCAGGACCGCGGCCTTGTCACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PQMVPHKVVARPGQQ*AFDPVQDRGLVTLL
Trigger: GAGGAGAGTGACAAGGCCGCGGTCCTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585858.1
CDS CCA 90 bp GCCTGCCCGTCTGCTTACCCTTGTGGAACTGGGGGCTGTAGTGGATaGAGGGGTCCCTCCTCTGGGCCAGCACCAGCGTCAGGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: ACPSAYPCGTGGCSG*RGPSSGPAPASGCQ
Trigger: CTGGCAACCTGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTCCATCCACTACAGCCCCCAGTTCCACAAGGGTAAGCAGACGGGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588962.1
CDS-3UTR CAA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGTGCAGGAGCGCGGCCTaGTCACTCTCCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWCRSAA*SLSSST
Trigger: GGTGGAGGAGGAGAGTGACAAGGCCGCGCTCCTGCA...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp TCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGCGCTGGGCAGAGATGTGATTaGGGGTGGAGGAGCCACGTT +
Preference number: 5 (lower is better)
Translates to: SDAGAQARRVCTQAGAGAGQRCD*GWRSHV
Trigger: AACGTGGCTCCTCCACCCCAAATCACATCTCTGCCC...AGCGCCCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS CCA 90 bp TGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: WPPRIHGRSARRPMP*SFRGVSASLAEATW
Trigger: CCAGGTGGCCTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000585858.1
CDS-3UTR CAA 90 bp CCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCACAGCCACGTGCCCTaGTGGGGTCAGCTGATCGCT +
Preference number: 5 (lower is better)
Translates to: PPWLSLLFQGSHRRESRWHSHVP*WGQLIA
Trigger: AGCGATCAGCTGACCCCACAAGGGCACGTGGCTGTG...CCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp CACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCCGCTCCTGGACACCCTaGCGCCACCGCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: HLTLECTTHPTVGKASVLRSWTP*RHRRKP
Trigger: GGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGCG...GAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS CCA 90 bp TGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGGCGACCAACTG +
Preference number: 5 (lower is better)
Translates to: WPPRIHGRSARRPMP*SFRGVSASLAGDQL
Trigger: CAGTTGGTCGCCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586748.6
ENST00000588962.1
ENST00000590329.5
CDS-3UTR CAA 90 bp CAAACTCAGATGCTGGAGCTCAGGCCCGCCGTGTGTGCACCCAGGCAGGAGCGGGGGCAGAGATGTGATTaGGGGTGGAGGAGCCACGTT +
Preference number: 5 (lower is better)
Translates to: QTQMLELRPAVCAPRQERGQRCD*GWRSHV
Trigger: AACGTGGCTCCTCCACCCCAAATCACATCTCTGCCC...CCGCTCCTGCCTGGGTGCACACACGGCGGGCCTGAGCTCCAGCATCTGAGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CAA 90 bp TGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGTGGCCCGGGGGGCAGAGATGTGATTaGGGGTGGAGGAGCCACGTT +
Preference number: 5 (lower is better)
Translates to: WLSLLFQGSHRRESRWPGGQRCD*GWRSHV
Trigger: AACGTGGCTCCTCCACCCCAAATCACATCTCTGCCC...CCCGGGCCACCTGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000589971.1
ENST00000592646.5
CDS GCA 90 bp ATTAGTGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGGCGACC +
Preference number: 5 (lower is better)
Translates to: ISGLLEFMEGQLVGR*HGRSGASPHPSLAT
Trigger: GGTCGCCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCACTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586748.6
ENST00000588962.1
ENST00000590329.5
CDS CCA 90 bp AGCGACTGGAAGAAGTACAACTTACAGCCCATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGACAGCAGCACTGTGGCCACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SDWKKYNLQPMARRA*SSTTTDSSTVATSL
Trigger: CAGGCTGGTGGCCACAGTGCTGCTGTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCATGGGCTGTAAGTTGTACTTCTTCCAGTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000589971.1
ENST00000590329.5
ENST00000591872.1
ENST00000592646.5
CDS CCA 90 bp TGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAGGACAGAGAC +
Preference number: 5 (lower is better)
Translates to: WPPRIHGRSARRPMP*SFRGVSASLAEDRD
Trigger: GTCTCTGTCCTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588347.5
ENST00000592505.1
CDS-3UTR CAA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCCGCTCCTGGACACCCTaGCGCCACCGCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGRSWTP*RHRRKP
Trigger: GGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGCG...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253031.6
ENST00000586748.6
ENST00000592646.5
CDS-3UTR CAA 90 bp ACCTCACACTTGAATGTACAACCCACCCCACTGTCGGGAAGGCCTCCGTCCTCGGCCACTGCCGGCCACTaGGGGCAGACACAGACACCT +
Preference number: 5 (lower is better)
Translates to: TSHLNVQPTPLSGRPPSSATAGH*GQTQTP
Trigger: AGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGC...CGAGGACGGAGGCCTTCCCGACAGTGGGGTGGGTTGTACATTCAAGTGTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS GCA 90 bp ATTAGTGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ISGLLEFMEGQLVGR*HGRSGASPHPSLRP
Trigger: TGGCCTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCACTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000585858.1
CDS-3UTR CAA 90 bp GGCCGCCCCCTTGGCTCTCCCTCCTGTTCCAGGGGAGCCATAGGAGGGAAAGCAGGGTTCACCTCACACTaGAATGTACAACCCACCCCA +
Preference number: 5 (lower is better)
Translates to: GRPLGSPSCSRGAIGGKAGFTSH*NVQPTP
Trigger: TGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACCC...TGCTTTCCCTCCTATGGCTCCCCTGGAACAGGAGGGAGAGCCAAGGGGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS GCA 90 bp ATTAGTGGCCTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: ISGLLEFMEGQLVGR*HGRSGASPHPSLRT
Trigger: TGTCCTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCACTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588347.5
ENST00000592505.1
CDS-3UTR CAA 90 bp ATCCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGCAGGAGCGCGGCCTaGTCACTCTCCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: ILVDAPVPTTVTAFPSLPCRSAA*SLSSST
Trigger: GGTGGAGGAGGAGAGTGACAAGGCCGCGCTCCTGCA...GGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGAGCACCAGCGTCAGGTaGCCAGTGACGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLSTSVR*PVTART
Trigger: TGTCCTGGCCGTCACTGGCAACCTGACGCTGGTGCT...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS-3UTR CAA 90 bp TCCTTCTGCTCCCCTGTTTCTCATACCCCCAAACTCAGATGCTGGAGCTCAGGCGCCACTGCCGGCCACTaGGGGCAGACACAGACACCT +
Preference number: 5 (lower is better)
Translates to: SFCSPVSHTPKLRCWSSGATAGH*GQTQTP
Trigger: AGGTGTCTGTGTCTGCCCCAAGTGGCCGGCAGTGGC...GCCTGAGCTCCAGCATCTGAGTTTGGGGGTATGAGAAACAGGGGAGCAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS GCA 90 bp CACGTGCCCTTGTGGGGTCAGCTGATCGCTTCTGCTGGTGGTGGCTaGATCTGGGGTGTCAGCCAGAAGATTAGTGGCCTCCTCGAATTC +
Preference number: 5 (lower is better)
Translates to: HVPLWGQLIASAGGG*IWGVSQKISGLLEF
Trigger: GAATTCGAGGAGGCCACTAATCTTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAAGGGCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS TCA 90 bp CCAGGACCTGTGAGGTGTCCACGTCAAAGAAGCTCTGATAGTAGCTaGAGGTCCAGAATCCCGGCTGCTGCTGCTGCTGCTGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PGPVRCPRQRSSDSS*RSRIPAAAAAAAPA
Trigger: TGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGACCTTCAGCTACTATCAGAGCTTCTTTGACGTGGACACCTCACAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
CDS CCA 90 bp CCCTTGTGGGGTCAGCTGATCGCTTCTGCTGGTGGTGGCTGCATCTaGGGTGTCAGCCAGAAGATTAGTGGCCTCCTCGAATTCATGGAA +
Preference number: 5 (lower is better)
Translates to: PLWGQLIASAGGGCI*GVSQKISGLLEFME
Trigger: TTCCATGAATTCGAGGAGGCCACTAATCTTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS-3UTR CAA 90 bp CCTGAAAGAAAGAATTGTCTGGGAGTGGCCCCAGAACCTCTCGCCTTGACTGGGGGGCAGAGATGTGATTaGGGGTGGAGGAGCCACGTT +
Preference number: 5 (lower is better)
Translates to: PERKNCLGVAPEPLALTGGQRCD*GWRSHV
Trigger: AACGTGGCTCCTCCACCCCAAATCACATCTCTGCCC...CCCAGTCAAGGCGAGAGGTTCTGGGGCCACTCCCAGACAATTCTTTCTTTCAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591872.1
CDS-3UTR CAA 90 bp CCTTGTAGACGCTCCAGTCCCTACTACTGTGACGGCATTTCCATCCCTCCCCTGGGGTTCACCTCACACTaGAATGTACAACCCACCCCA +
Preference number: 5 (lower is better)
Translates to: PCRRSSPYYCDGISIPPLGFTSH*NVQPTP
Trigger: TGGGGTGGGTTGTACATTCAAGTGTGAGGTGAACCC...CAGGGGAGGGATGGAAATGCCGTCACAGTAGTAGGGACTGGAGCGTCTACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253031.6
ENST00000586748.6
CDS TCA 72 bp ATCCCTCGCTGGCGACCAACTGCACCCACGGAGGCTTaGACTCGTCGTCCCGTCCCCACAGGTGCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: IPRWRPTAPTEA*TRRPVPTGALR
Trigger: GCGGAGCGCACCTGTGGGGACGGGACGACGAGTTCAAGCCTCCGTGGGTGCAGTTGGTCGCCAGCGAGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586748.6
ENST00000590329.5
CDS GCA 72 bp GCTGACAGGCCCAGGGCCAGCGCCCCAAAGAGCCACTaGAGCCAAGGCACAGGGATGAGCCACAGGACCACC +
Preference number: 6 (lower is better)
Translates to: ADRPRASAPKSH*SQGTGMSHRTT
Trigger: GGTGGTCCTGTGGCTCATCCCTGTGCCTTGGCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000589971.1
ENST00000590329.5
ENST00000592646.5
CDS GCA 72 bp CTGCTCCTGCAGGAGCTGCACATTGCGGGCATTCAGTaGCTGCCCGGAGAGCCTGGGTCAGCTGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LLLQELHIAGIQ*LPGEPGSAGGC
Trigger: GCAGCCCCCAGCTGACCCAGGCTCTCCGGGCAGGCACTGAATGCCCGCAATGTGCAGCTCCTGCAGGAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592505.1
CDS CAA 72 bp CATCCCTCGCTGGCGACCAACTGCACCCACGGAGGCTaGAACTCGTCGTCCCGTCCCCACAGGTGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: HPSLATNCTHGG*NSSSRPHRCAP
Trigger: CGGAGCGCACCTGTGGGGACGGGACGACGAGTTCAAGCCTCCGTGGGTGCAGTTGGTCGCCAGCGAGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586748.6
ENST00000590329.5
CDS GCA 72 bp GTCCAGAATCCCGGCTGCTGCTGCTGCTGCTGCTCCTaGAGGAGCGCGGCCTTGTCACTCTCCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: VQNPGCCCCCCS*RSAALSLSSST
Trigger: GGTGGAGGAGGAGAGTGACAAGGCCGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
CDS GCA 72 bp TCAGCTGGGGGCATGGAAGGTCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCGTCTCCGCATCCCTCG +
Preference number: 6 (lower is better)
Translates to: SAGGMEGQLVGR*HGRSGASPHPS
Trigger: CGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGCCCCCAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587943.5
CDS GCA 72 bp CTGCTCCTGCAGGAGCTGCACATTGCGGGCATTCAGTaGCTGCCCGGAGAGCCTGGGTCAGCTGGGGGCATG +
Preference number: 6 (lower is better)
Translates to: LLLQELHIAGIQ*LPGEPGSAGGM
Trigger: CATGCCCCCAGCTGACCCAGGCTCTCCGGGCAGGCACTGAATGCCCGCAATGTGCAGCTCCTGCAGGAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587943.5
CDS GCA 72 bp TCCTGCAGGAGCTGCACATTGCGGGCATTCAGTGCCTaGCCGGAGAGCCTGGGTCAGCTGGGGGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: SCRSCTLRAFSA*PESLGQLGAAR
Trigger: CCTTGCAGCCCCCAGCTGACCCAGGCTCTCCGGGCAGGCACTGAATGCCCGCAATGTGCAGCTCCTGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592505.1
CDS CCA 72 bp TGGGGGCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAG +
Preference number: 6 (lower is better)
Translates to: WGHGRSARRPMP*SFRGVSASLAE
Trigger: CTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587943.5
CDS CCA 72 bp CAGTCACCCCCTGTACCCCAGGGCCCTGCCAGGCATTaGGCCTGCCCGTCTGCTTACCCTTGTGGAACTGGG +
Preference number: 6 (lower is better)
Translates to: QSPPVPQGPARH*ACPSAYPCGTG
Trigger: CCCAGTTCCACAAGGGTAAGCAGACGGGCAGGCCCAATGCCTGGCAGGGCCCTGGGGTACAGGGGGTGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588962.1
CDS CAA 72 bp GAGGGGTCCCTCCTCTGGGCCAGCACCAGCGTCAGGTaGCCAGTGACGGCCAGGACAAAGGCCAACGTGGCA +
Preference number: 6 (lower is better)
Translates to: EGSLLWASTSVR*PVTARTKANVA
Trigger: TGCCACGTTGGCCTTTGTCCTGGCCGTCACTGGCAACCTGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
CDS CAA 72 bp GCAGTCACCCCCTGTACCCCAGGGCCCTGCCAGGCATaGGGCCTGCCCGTCTGCTTACCCTTGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: AVTPCTPGPCQA*GLPVCLPLWNW
Trigger: CCAGTTCCACAAGGGTAAGCAGACGGGCAGGCCCAATGCCTGGCAGGGCCCTGGGGTACAGGGGGTGACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588962.1
CDS TCA 72 bp GGGCCAGGGGCACCAGCCACGCATAGCAGTAGATGCTaGTGCCTGCCACGGTCACCTTGTGGAACTGGGGGC +
Preference number: 6 (lower is better)
Translates to: GPGAPATHSSRC*CLPRSPCGTGG
Trigger: GCCCCCAGTTCCACAAGGTGACCGTGGCAGGCATCAGCATCTACTGCTATGCGTGGCTGGTGCCCCTGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000592646.5
CDS GCA 72 bp CTGAAGGTCCAGAATCCCGGCTGCTGCTGCTGCTGCTaGTCCTGCAGGAGCGCGGCCTTGTCACTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LKVQNPGCCCCC*SCRSAALSLSS
Trigger: GGAGGAGAGTGACAAGGCCGCGCTCCTGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGACCTTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
CDS GCA 72 bp TCCTGCAGGAGCTGCACATTGCGGGCATTCAGTGCCTaGCCGGAGAGCCTGGGTCAGCTGGGGGCATGGAAG +
Preference number: 6 (lower is better)
Translates to: SCRSCTLRAFSA*PESLGQLGAWK
Trigger: CTTCCATGCCCCCAGCTGACCCAGGCTCTCCGGGCAGGCACTGAATGCCCGCAATGTGCAGCTCCTGCAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587943.5
CDS CCA 72 bp CAGAAGGGGCCATACAGATCCGGCCGATTCCGCAGATaGTGCCGCACAAAGTTGTGGCCAGGCCGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: QKGPYRSGRFRR*CRTKLWPGRGS
Trigger: GCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGGCCCCTTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
CDS CCA 72 bp GCCACGGTCACATACAGATCCGGCCGATTCCGCAGATaGTGCCGCACAAAGTTGTGGCCAGGCCGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: ATVTYRSGRFRR*CRTKLWPGRGS
Trigger: GCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGTGACCGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590329.5
CDS CAA 90 bp GGGCCATACAGATCCGGCCGATTCCGCAGATGGTGCCGCACAAAGTaGTGGCCAGGCCGGGGCAGCAGTGAGCCTTTGATCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GPYRSGRFRRWCRTK*WPGRGSSEPLIRSR
Trigger: CCTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
CDS GCA 72 bp AAGGGGCCATACAGATCCGGCCGATTCCGCAGATGGTaGCGCACAAAGTTGTGGCCAGGCCGGGGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: KGPYRSGRFRRW*RTKLWPGRGSS
Trigger: ACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
CDS GCA 72 bp GTCCAGAATCCCGGCTGCTGCTGCTGCTGCTGCTCCTaGAGGAGCTGCACATTGCGGGCATTCAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: VQNPGCCCCCCS*RSCTLRAFSAC
Trigger: GCAGGCACTGAATGCCCGCAATGTGCAGCTCCTGCAGGAGCAGCAGCAGCAGCAGCAGCCGGGATTCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587943.5
ENST00000592505.1
CDS CCA 72 bp CGAATTCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGGC +
Preference number: 6 (lower is better)
Translates to: RIHGRSARRPMP*SFRGVSASLAG
Trigger: GCCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586748.6
ENST00000588962.1
ENST00000590329.5
CDS CAA 90 bp GTCACATACAGATCCGGCCGATTCCGCAGATGGTGCCGCACAAAGTaGTGGCCAGGCCGGGGCAGCAGTGAGCCTTTGATCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VTYRSGRFRRWCRTK*WPGRGSSEPLIRSR
Trigger: CCTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590329.5
CDS TCA 72 bp GGGCCAGGGGCACCAGCCACGCATAGCAGTAGATGCTaGTGCCTGCCACGGTCACATACAGATCCGGCCGAT +
Preference number: 6 (lower is better)
Translates to: GPGAPATHSSRC*CLPRSHTDPAD
Trigger: ATCGGCCGGATCTGTATGTGACCGTGGCAGGCATCAGCATCTACTGCTATGCGTGGCTGGTGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590329.5
CDS GCA 72 bp CTCCTCGAATTCATGGAAGGTCAGCTCGTCGGCCGATaGCATGGTCGTTCAGGGGCGTCTCCGCATCCCTCG +
Preference number: 6 (lower is better)
Translates to: LLEFMEGQLVGR*HGRSGASPHPS
Trigger: CGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS GCA 72 bp CAGCCACGTGCCCTTGTGGGGTCAGCTGATCGCTTCTaGTGGTGGTGGCTGCATCTGGGGTGTCAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: QPRALVGSADRF*WWWLHLGCQPE
Trigger: TTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAAGGGCACGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS GCA 72 bp ACGGTCACATACAGATCCGGCCGATTCCGCAGATGGTaGCGCACAAAGTTGTGGCCAGGCCGGGGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: TVTYRSGRFRRW*RTKLWPGRGSS
Trigger: ACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAATCGGCCGGATCTGTATGTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590329.5
CDS CCA 72 bp CGAATTCATGGAAGGTCAGCTCGTCGGCCGATGCCATaGTCGTTCAGGGGCGTCTCCGCATCCCTCGCTGAG +
Preference number: 6 (lower is better)
Translates to: RIHGRSARRPMP*SFRGVSASLAE
Trigger: CTCAGCGAGGGATGCGGAGACGCCCCTGAACGACCATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000588347.5
ENST00000592505.1
CDS CCA 72 bp TCTGCTTACCCTTGTGGAACTGGGGGCTGTAGTGGATaGAGGGGTCCCTCCTCTGGGCCAGCACCAGCGTCA +
Preference number: 6 (lower is better)
Translates to: SAYPCGTGGCSG*RGPSSGPAPAS
Trigger: TGACGCTGGTGCTGGCCCAGAGGAGGGACCCCTCCATCCACTACAGCCCCCAGTTCCACAAGGGTAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588962.1
CDS CCA 72 bp CCACGTGCCCTTGTGGGGTCAGCTGATCGCTTCTGCTaGTGGTGGCTGCATCTGGGGTGTCAGCCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: PRALVGSADRFC*WWLHLGCQPED
Trigger: ATCTTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAAGGGCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS CCA 72 bp AAGAAGTACAACTTACAGCCCATGGCCAGGAGGGCGTaGAGCAGCACGACCACGGACAGCAGCACTGTGGCC +
Preference number: 6 (lower is better)
Translates to: KKYNLQPMARRA*SSTTTDSSTVA
Trigger: GGCCACAGTGCTGCTGTCCGTGGTCGTGCTGCTCCACGCCCTCCTGGCCATGGGCTGTAAGTTGTACTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000589971.1
ENST00000590329.5
ENST00000591872.1
ENST00000592646.5
CDS CCA 72 bp TGGGGTGGAGGAGCCACGTTCTCCGGAGGCAGCGACTaGAAGAAGTACAACTTACAGCCCATGGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: WGGGATFSGGSD*KKYNLQPMARR
Trigger: CCTCCTGGCCATGGGCTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGAGAACGTGGCTCCTCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000589971.1
ENST00000590329.5
ENST00000591872.1
ENST00000592646.5
CDS GCA 72 bp TTGTGGGGTCAGCTGATCGCTTCTGCTGGTGGTGGCTaGATCTGGGGTGTCAGCCAGAAGATTAGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: LWGQLIASAGGG*IWGVSQKISGL
Trigger: GAGGCCACTAATCTTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS CCA 72 bp GGTCAGCTGATCGCTTCTGCTGGTGGTGGCTGCATCTaGGGTGTCAGCCAGAAGATTAGTGGCCTCCTCGAA +
Preference number: 6 (lower is better)
Translates to: GQLIASAGGGCI*GVSQKISGLLE
Trigger: TTCGAGGAGGCCACTAATCTTCTGGCTGACACCCCAGATGCAGCCACCACCAGCAGAAGCGATCAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000585858.1
ENST00000586575.5
ENST00000586748.6
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1
CDS TCA 72 bp GTGAGGTGTCCACGTCAAAGAAGCTCTGATAGTAGCTaGAGGTCCAGAATCCCGGCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VRCPRQRSSDSS*RSRIPAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCGGGATTCTGGACCTTCAGCTACTATCAGAGCTTCTTTGACGTGGACACCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000253031.6
ENST00000586575.5
ENST00000586748.6
ENST00000587943.5
ENST00000588347.5
ENST00000588962.1
ENST00000590329.5
ENST00000592505.1