RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YIPF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000058799

Ensembl transcript IDs: ENST00000072644.7, ENST00000371399.5, ENST00000464950.6, ENST00000465897.5, ENST00000469457.5, ENST00000472983.1, ENST00000480151.5

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGTGAAGCATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGC +
Preference number: 1 (lower is better)
Translates to: HSEACHLTVVAKGRH*ACLTYSLAFQSNQR
Trigger: GCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACATGCTTCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR GCA 90 bp TCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTaGTCATTCTGCTTTCCTGCAGTGGATGCCACTTCCCAAAGAACC +
Preference number: 1 (lower is better)
Translates to: SRHWEFVPLHQFCWL*SFCFPAVDATSQRT
Trigger: GGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR GCA 90 bp TGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCCACTTCCCAAAGAACCATGCTCCAA +
Preference number: 1 (lower is better)
Translates to: WEFVPLHQFCWLCSF*FPAVDATSQRTMLQ
Trigger: TTGGAGCATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR CCA 90 bp CCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGA +
Preference number: 1 (lower is better)
Translates to: PPKFLLFGYFRMANI*REEDPPGSLYIIQR
Trigger: TCTCTGAATTATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR TCA 90 bp ATCAGAATTTTCCATGGTTCTATTTCAGGTATTAAGGTACCACAGTaGAGCATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTGAGC +
Preference number: 1 (lower is better)
Translates to: IRIFHGSISGIKVPQ*SMSFDCGGKGTALS
Trigger: GCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAACCATGGAAAATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp AGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCGCACCATCCAGACACTaGGAATTTGTGCCACTCCAT +
Preference number: 2 (lower is better)
Translates to: SSRLIPTKVSTVRLLQDGAPSRH*EFVPLH
Trigger: ATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGC...GCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp ACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATGACACTGGGAATTTGTaGCACTCCATCAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: TALSMPNLFPGISVQSAHDTGNL*HSISSA
Trigger: AGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTC...ATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp ACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATTCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: TALSMPNLFPGISVQSAHSAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...ATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp GTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: VQYQVTKDKFSSSRLIPTCLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...GGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp ATTTGGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: IWREEDPPGSLYIIQREDCLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...GTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp CACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCC +
Preference number: 2 (lower is better)
Translates to: HQSFYCSATSGWLTFGEKAKGRH*ACLTYS
Trigger: GGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGC...CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp CTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTACTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: LPVNPHQSFYCSATSGWLLSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...TAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp AATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: NLCHSISSAGSAHSAFLQSAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...CTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp GGCATTTCAGTCCAATCAGCGCATGCTCGCAATGATCATCCATGGGTGAAAAGGTCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: GISVQSAHARNDHPWVKRSAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...CCTTTTCACCCATGGATGATCATTGCGAGCATGCGCTGATTGGACTGAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp TCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: SPPKFLLFGYFRMANIWRVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...TCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp TGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACTGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCC +
Preference number: 2 (lower is better)
Translates to: CPVSGYQRQIFKLPVNPHWLCSF*FPAVDA
Trigger: GGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCA...GTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGAAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 2 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp CAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: QPFSSAVQYQVTKDKFSSCLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...GCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp TTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGGCAAAGTGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCC +
Preference number: 2 (lower is better)
Translates to: FQVLRYHSEACHLTVVAKWLCSF*FPAVDA
Trigger: GGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCA...CTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp ATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGAGCGCATGCTCGCAATaGTCATCCATGGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: IQFSCPVSGYQRQIFKLPSACSQ*SSMGEK
Trigger: CTTTTCACCCATGGATGATCATTGCGAGCATGCGCT...CGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp GCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: AIQFSCPVSGYQRQIFKLVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...GAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp GGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGAGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: GIYFAAIQFSCPVSGYQRVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...TCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp CAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCCTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: QPFSSAVQYQVTKDKFSSLSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...GCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLILSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCGACACTGGGAATTTGTaGCACTCCATCAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTDTGNL*HSISSA
Trigger: AGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTC...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR GCA 90 bp CAGACACAGACATCATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCGACACTGGGAATTTGTaGCACTCCATCAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: QTQTSCEVFILQPFSSAVDTGNL*HSISSA
Trigger: AGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTC...GACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATGATGTCTGTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464950.6
3UTR-3UTR CCA 90 bp TTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAGCACCATCCAGACACTaGGAATTTGTGCCACTCCAT +
Preference number: 2 (lower is better)
Translates to: LQPFSSAVQYQVTKDKFSAPSRH*EFVPLH
Trigger: ATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGC...TGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp AAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 2 (lower is better)
Translates to: KDKFSSSRLIPTKVSTVRRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...CCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp CCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAGATGATCATCCATGGGTaGAAAGGAAGAGCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: PKFLLFGYFRMANIWREEMIIHG*KGRAER
Trigger: TCTTTCAGCTCTTCCTTTTCACCCATGGATGATCAT...CTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp TCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAATTAAGGTACCACAGTaGAGCATGTCATTTGACTGT +
Preference number: 2 (lower is better)
Translates to: SPPKFLLFGYFRMANIWRIKVPQ*SMSFDC
Trigger: ACAGTCAAATGACATGCTTCACTGTGGTACCTTAAT...TCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp TTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 2 (lower is better)
Translates to: FCSHSVQLSSIRLPKTNFRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...AAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CCA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCTCGGCTACTTCAGGATaGCTAACATTTGGAGAGAAG +
Preference number: 2 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFSATSG*LTFGEK
Trigger: CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGA...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR TCA 90 bp TATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTATGATCATCCATGGGTaGAAAGGAAGAGCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: YQVTKDKFSSSRLIPTKVMIIHG*KGRAER
Trigger: TCTTTCAGCTCTTCCTTTTCACCCATGGATGATCAT...AACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR TCA 72 bp GCATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCCCTGGCATTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: ACHLTVVAKGRH*ACLTYSLAFQS
Trigger: GGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CAA 90 bp CCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCACCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 3 (lower is better)
Translates to: PSRHWEFVPLHQFCWLCSPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...TGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CAA 90 bp ACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATCCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 3 (lower is better)
Translates to: TALSMPNLFPGISVQSAHPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...ATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR TCA 72 bp CCCTGGCATTTCAGTCCAATCAGCGCATGCTCGCAATaGTCATCCATGGGTGAAAAGGAAGAGCTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: PWHFSPISACSQ*SSMGEKEELKD
Trigger: GTCTTTCAGCTCTTCCTTTTCACCCATGGATGATCATTGCGAGCATGCGCTGATTGGACTGAAATGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR CCA 72 bp TTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATA +
Preference number: 3 (lower is better)
Translates to: FLLFGYFRMANI*REEDPPGSLYI
Trigger: TATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CAA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCCCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 3 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR-3UTR CAA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCAGTGAAGCATGTCATTaGACTGTGGTGGCAAAGGGA +
Preference number: 3 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLISEACH*TVVAKG
Trigger: TCCCTTTGCCACCACAGTCAAATGACATGCTTCACT...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
3UTR TCA 72 bp TTCCATGGTTCTATTTCAGGTATTAAGGTACCACAGTaGAGCATGTCATTTGACTGTGGTGGCAAAGGGACG +
Preference number: 3 (lower is better)
Translates to: FHGSISGIKVPQ*SMSFDCGGKGT
Trigger: CGTCCCTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAACCATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGGCTCGGGCCTCAGTTaGTCCGCGCCGGTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMGSGLS*SAPVSV
Trigger: GACCGAAACCGGCGCGGAGCAACTGAGGCCCGAGCC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR TCA 90 bp AAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCC +
Preference number: 4 (lower is better)
Translates to: KRVIRRQCGTIQTLGICAAKGRH*ACLTYS
Trigger: GGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGC...GGCACAAATTCCCAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ATPSVLLALLILLSCSGCCLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...GCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCC +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMAKGRH*ACLTYS
Trigger: GGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp AGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCGAGGAAACCCCAGAGTaGAAGAGGAACCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSRLIPTKVSTVRLLQDGEETPE*KRNQPG
Trigger: GCCTGGCTGGTTCCTCTTGCACTCTGGGGTTTCCTC...GCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCCCTGGCAGACAGAGCTGGGTTTaGTTCCCGATTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FDCGGKGTALSMPNLFPGRQSWV*FPILLL
Trigger: AAGCAGCAGAATCGGGAATCAAACCCAGCTCTGTCT...GCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR TCA 90 bp CAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGATCTTCTTCTCTTCCTaGGCCTCTTGGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: QCGTIQTLGICATPSVLLIFFSS*ASWGSW
Trigger: CCAGGATCCCCAAGAGGCTCAGGAAGAGAAGAAGAT...CAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGCCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCTGCCCAGGGCAATCATaGCTAGAATCCAACGAACAG +
Preference number: 4 (lower is better)
Translates to: ATPSVLLALLILLSCSGCCPGQS*LESNEQ
Trigger: CTGTTCGTTGGATTCTAGTCATGATTGCCCTGGGCA...GCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp AAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCAGCGCATGCTCGCAATaGTCATCCATGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: KRVIRRQCGTIQTLGICASACSQ*SSMGEK
Trigger: CTTTTCACCCATGGATGATCATTGCGAGCATGCGCT...GGCACAAATTCCCAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp CCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PSRHWEFVPLHQFCWLCSWLCSF*FPAVDA
Trigger: GGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCA...TGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGTGCTGTTTCTCCACATaGGGAAACCCCAGAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QCGTIQTLGICATPSVLLCCFST*GNPRVQ
Trigger: TTGCACTCTGGGGTTTCCTCATGTGGAGAAACAGCA...CAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGCCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCCACTTCCTGCCCAGGGCAATCATaGCTAGAATCCAACGAACAG +
Preference number: 4 (lower is better)
Translates to: HQFCWLCSFCFPAVDATSCPGQS*LESNEQ
Trigger: CTGTTCGTTGGATTCTAGTCATGATTGCCCTGGGCA...GGAAGTGGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp AGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTGCCAAGAGAGATCCTaGGATGCCCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: RHWEFVPLHQFCWLCSFCCQERS*DAQGNH
Trigger: ATGATTGCCCTGGGCATCTCAGGATCTCTCTTGGCA...GCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ATPSVLLALLILLSCSGCYCGGI*VCCQRS
Trigger: ACTTCTCTGACAGCAAACCCAGATGCCACCACAGTA...GCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCCAATTGTCACAATTGTaGCCAATGCAACGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: ATPSVLLALLILLSCSGCQLSQL*PMQRVG
Trigger: ACCGACGCGTTGCATTGGCCACAATTGTGACAATTG...GCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGCACCATCCAGACACTaGGAATTTGTGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMAPSRH*EFVPLH
Trigger: ATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp AAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCTTTGCAGGGTTTGTGTaGATGTTTAGAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KRVIRRQCGTIQTLGICAFAGFV*MFREQV
Trigger: CACCTGCTCTCTAAACATTCACACAAACCCTGCAAA...GGCACAAATTCCCAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR GCA 90 bp CCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGATTCTGCTGCTTCTCTaGTGTATGCGCGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PHQSFYCSATSGWLTFGEILLLL*CMRAPR
Trigger: GCGAGGAGCGCGCATACAGCAGAGAAGCAGCAGAAT...CTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR GCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMLSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGACACTGGGAATTTGTaGCACTCCATCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMDTGNL*HSISSA
Trigger: AGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATTGGCAAAGACCAACGTaGCACATATCCAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TALSMPNLFPGISVQSAHWQRPT*HISKRG
Trigger: GCCCCTTTTGGATATGTGCCACGTTGGTCTTTGCCA...ATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGTAGTTGTTGGGAGATaGTCCATCTCTGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMVVVGR*SISGAS
Trigger: TGATGCACCAGAGATGGACCATCTCCCAACAACTAC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCCACTTCCCTCATTAGCTGGACTTaGCTGCAGCAACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: HQFCWLCSFCFPAVDATSLISWT*LQQLFG
Trigger: ACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAG...GGAAGTGGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCCTCATTAGCTGGACTTaGCTGCAGCAACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TIQTLGICATPSVLLALLLISWT*LQQLFG
Trigger: ACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAG...GAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGATCTTCTTCTCTTCCTaGGCCTCTTGGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: PHQSFYCSATSGWLTFGEIFFSS*ASWGSW
Trigger: CCAGGATCCCCAAGAGGCTCAGGAAGAGAAGAAGAT...CTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATGCTCGCAATGATCATCTGCCAAGAGAGATCCTaGGATGCCCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: LTYSLAFQSNQRMLAMIICQERS*DAQGNH
Trigger: ATGATTGCCCTGGGCATCTCAGGATCTCTCTTGGCA...GATGATCATTGCGAGCATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PHQSFYCSATSGWLTFGECLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...CTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCACAAGTCATCTACTGCTaGCATTCGGCCAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: EFVPLHQFCWLCSFCFPAQVIYC*HSASES
Trigger: AGACTCACTGGCCGAATGGCAGCAGTAGATGACTTG...TGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp GAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCATGTCAGAGAAGTGGCTaGATTGCCAAATTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: EFVPLHQFCWLCSFCFPACQRSG*IAKFSR
Trigger: CCGCGAGAATTTGGCAATGCAGCCACTTCTCTGACA...TGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS-3UTR CCA 90 bp CCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCACAATGTTTACTGTGGTaGCATCTGGGTTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PSRHWEFVPLHQFCWLCSQCLLW*HLGLLS
Trigger: TGACAGCAAACCCAGATGCCACCACAGTAAACATTG...TGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGTGGCACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCAATGTTTACTGTGGTaGCATCTGGGTTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CGTIQTLGICATPSVLLAQCLLW*HLGLLS
Trigger: TGACAGCAAACCCAGATGCCACCACAGTAAACATTG...AGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTTCTGCTTGTTAAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: FLLVKRVIRRQCGTIQTLRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...CAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTTAACAAGCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGCTGTTTCTCCACATaGGGAAACCCCAGAGTGCAA +
Preference number: 4 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGCCFST*GNPRVQ
Trigger: TTGCACTCTGGGGTTTCCTCATGTGGAGAAACAGCA...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTAAGGTACCACAGTaGAGCATGTCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: FDCGGKGTALSMPNLFPGIKVPQ*SMSFDC
Trigger: ACAGTCAAATGACATGCTTCACTGTGGTACCTTAAT...GCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCCCTGGCTGTCAGAGAAGTGGCTaGATTGCCAAATTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FDCGGKGTALSMPNLFPGCQRSG*IAKFFK
Trigger: TTTGAAGAATTTGGCAATGCAGCCACTTCTCTGACA...GCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp CAGACACAGACATCATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCGAGGAAACCCCAGAGTaGAAGAGGAACCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QTQTSCEVFILQPFSSAVEETPE*KRNQPG
Trigger: GCCTGGCTGGTTCCTCTTGCACTCTGGGGTTTCCTC...GACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATGATGTCTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTCTGCTTGTTAAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGATGAGGAAGAAAATTTaGAGGGTTCTCGCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: FLLVKRVIRRQCGTIQTLMRKKI*RVLAGL
Trigger: TAACCCCGCGAGAACCCTGCAAATTTTCTTCCTCAT...CAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTTAACAAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS-3UTR CCA 90 bp TGTGGCACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTTTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: CGTIQTLGICATPSVLLALLSEK*LHCQIL
Trigger: AAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAA...AGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CCA 90 bp CTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAGTAGTTGTTGGGAGATaGTCCATCTCTGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: LPVNPHQSFYCSATSGWLVVVGR*SISGAS
Trigger: TGATGCACCAGAGATGGACCATCTCCCAACAACTAC...TAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAATGCCAAGAGAGATCCTaGGATGCCCAGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: PPKFLLFGYFRMANIWRECQERS*DAQGNH
Trigger: ATGATTGCCCTGGGCATCTCAGGATCTCTCTTGGCA...TTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp ACGGCACTGAGCATGCCTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATATGATCATCCATGGGTaGAAAGGAAGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TALSMPNLFPGISVQSAHMIIHG*KGRAER
Trigger: TCTTTCAGCTCTTCCTTTTCACCCATGGATGATCAT...ATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAGGCATGCTCAGTGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAAGCGCATGCTCGCAATaGTCATCCATGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SPPKFLLFGYFRMANIWRSACSQ*SSMGEK
Trigger: CTTTTCACCCATGGATGATCATTGCGAGCATGCGCT...TCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGAGAGATCTGGATTGCTaGGGATATATAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMRDLDC*GYITSQ
Trigger: TTGTGAGGTTATATATCCGCAGCAATCCAGATCTCT...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCCACAATTGTGGCCAATaGAACGCGTCGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: VQYQVTKDKFSSSRLIPTHNCGQ*NASVIL
Trigger: GAGGATAACCGACGCGTTGCATTGGCCACAATTGTG...GGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp CCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTAGCTGGACTTGGCTaGAGCAACTGTTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PVNPHQSFYCSATSGWLTLAGLG*SNCLVW
Trigger: CCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAA...TGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGACCTCAATGTTTACTGTaGTGGCATCTGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGPQCLL*WHLGLL
Trigger: CAGCAAACCCAGATGCCACCACAGTAAACATTGAGG...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAATCCTCACGAACAGCTaGCCAAAATGTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: EFVPLHQFCWLCSFCFPAILTNS*PKCHCQ
Trigger: TTGGCAATGACATTTTGGCCAGCTGTTCGTGAGGAT...TGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGACAATTGTCACAATTGTaGCCAATGCAACGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGQLSQL*PMQRVG
Trigger: ACCGACGCGTTGCATTGGCCACAATTGTGACAATTG...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RHWEFVPLHQFCWLCSFCSNCLV*SSCSCW
Trigger: CCAACAACTACAGCTACTCCAAACCAAACAGTTGCT...GCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCGCACCATCCAGACACTaGGAATTTGTGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: VQYQVTKDKFSSSRLIPTAPSRH*EFVPLH
Trigger: ATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGC...GGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CTAACCTATTCCCTGGCATTTCAGTCCAATCAGCGCATGCTCGCAATGATCATCAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTYSLAFQSNQRMLAMIIRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...GATGATCATTGCGAGCATGCGCTGATTGGACTGAAATGCCAGGGAATAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAGCGCATGCTCGCAATaGTCATCCATGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: HQSFYCSATSGWLTFGEKSACSQ*SSMGEK
Trigger: CTTTTCACCCATGGATGATCATTGCGAGCATGCGCT...CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGCAAAGGGACGGCACTaGGCATGCCTAACCTATTCC +
Preference number: 4 (lower is better)
Translates to: VTKDKFSSSRLIPTKVSTAKGRH*ACLTYS
Trigger: GGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGC...AGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: HQSFYCSATSGWLTFGEKVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGACACAGACATCATGTaGGGTATTTATTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EFVPLHQFCWLCSFCFPADTDIM*GIYFAA
Trigger: GGCTGCAAAATAAATACCTCACATGATGTCTGTGTC...TGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCCCTGGCATGAGGAAGAAAATTTaGAGGGTTTGTGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: FDCGGKGTALSMPNLFPGMRKKI*RVCVNV
Trigger: AACATTCACACAAACCCTGCAAATTTTCTTCCTCAT...GCCAGGGAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR GCA 90 bp TGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACTTGCAAGTCATCTACTaGTGCCATTCGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CPVSGYQRQIFKLPVNPHLQVIY*CHSASE
Trigger: CTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAA...GTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp ATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCATTGCAAGTCATCTACTaGTGCCATTCGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IFKLPVNPHQSFYCSATSLQVIY*CHSASE
Trigger: CTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAA...TGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGCCAAATTCTTCAAATTaGAAGTCATCTACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FVPLHQFCWLCSFCFPAVPNSSN*KSSTAA
Trigger: GGCAGCAGTAGATGACTTGCAATTTGAAGAATTTGG...CACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CCA 90 bp TCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGACCTCAATGTTTACTGTaGTGGCATCTGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPPKFLLFGYFRMANIWRPQCLL*WHLGLL
Trigger: CAGCAAACCCAGATGCCACCACAGTAAACATTGAGG...TCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCTCCTGGCTGATGTTTTaGGGTTTCACCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SCPVSGYQRQIFKLPVNPSWLMF*GFTRIL
Trigger: GAGGATCCTGGTGAAACCCCAAAACATCAGCCAGGA...GGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAGTGGCAAAGACCAACGTaGCACATATCCAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKFLLFGYFRMANIWREEWQRPT*HISKRG
Trigger: GCCCCTTTTGGATATGTGCCACGTTGGTCTTTGCCA...CTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ATTTGGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACCAATTGTCACAATTGTaGCCAATGCAACGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: IWREEDPPGSLYIIQREDQLSQL*PMQRVG
Trigger: ACCGACGCGTTGCATTGGCCACAATTGTGACAATTG...GTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPVNPHQSFYCSATSGWLSNCLV*SSCSCW
Trigger: CCAACAACTACAGCTACTCCAAACCAAACAGTTGCT...TAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATCGGCTACTTCAGGATaGCTAACATTTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGSATSG*LTFGEK
Trigger: CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGA...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAATCTTCTTCTCTTCCTaGGCCTCTTGGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: LQPFSSAVQYQVTKDKFSIFFSS*ASWGSW
Trigger: CCAGGATCCCCAAGAGGCTCAGGAAGAGAAGAAGAT...TGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGGCAAAGTGCCCAGGGCAATCATaGCTAGAATCCAACGAACAG +
Preference number: 4 (lower is better)
Translates to: FQVLRYHSEACHLTVVAKCPGQS*LESNEQ
Trigger: CTGTTCGTTGGATTCTAGTCATGATTGCCCTGGGCA...CTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp ACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTAGAGATCTGGATTGCTaGGGATATATAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: TLGICATPSVLLALLILLRDLDC*GYITSQ
Trigger: TTGTGAGGTTATATATCCGCAGCAATCCAGATCTCT...AAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GGTAGTCTGTACATAATTCAGAGAGAGGACATCAGAATTTTCCATGGTTCTATTGAGGAAACCCCAGAGTaGAAGAGGAACCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSLYIIQREDIRIFHGSIEETPE*KRNQPG
Trigger: GCCTGGCTGGTTCCTCTTGCACTCTGGGGTTTCCTC...AATAGAACCATGGAAAATTCTGATGTCCTCTCTCTGAATTATGTACAGACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGGCAAAGCACAATTGTGGCCAATaGAACGCGTCGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: FQVLRYHSEACHLTVVAKHNCGQ*NASVIL
Trigger: GAGGATAACCGACGCGTTGCATTGGCCACAATTGTG...CTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp ATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCATTAGCTGGACTTGGCTaGAGCAACTGTTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IFKLPVNPHQSFYCSATSLAGLG*SNCLVW
Trigger: CCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAA...TGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp CATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTATGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: HVRYLFCSHSVQLSSIRLWLCSF*FPAVDA
Trigger: GGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCA...TAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp ATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGACACTGGGAATTTGTaGCACTCCATCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IFKLPVNPHQSFYCSATSDTGNL*HSISSA
Trigger: AGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTC...TGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCGAGAAGTGGCTGCATTaGCAAATTCTCGCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLIEKWLH*QILAGL
Trigger: TAACCCCGCGAGAATTTGGCAATGCAGCCACTTCTC...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS-3UTR CCA 90 bp CACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HQSFYCSATSGWLTFGEKYCGGI*VCCQRS
Trigger: ACTTCTCTGACAGCAAACCCAGATGCCACCACAGTA...CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCTCCTGGCTGATGTTTTaGGGTTTCACCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLISWLMF*GFTRIL
Trigger: GAGGATCCTGGTGAAACCCCAAAACATCAGCCAGGA...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGGCACCATCCAGACACTaGGAATTTGTGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: KDKFSSSRLIPTKVSTVRAPSRH*EFVPLH
Trigger: ATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGC...CCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp CCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGCACAATCTCCAGAAATaGATAGGAGACGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: PHQSFYCSATSGWLTFGEHNLQK*IGDDVH
Trigger: ATGAACATCGTCTCCTATTCATTTCTGGAGATTGTG...CTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTTGCTTGTTAAACGGGTaGTTAGGCGCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FCSHSVQLSSIRLPKTNFCLLNG*LGASVA
Trigger: TGCCACACTGGCGCCTAATCACCCGTTTAACAAGCA...AAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TCATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTCAAGTCATCTACTGCTaGCATTCGGCCAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SCEVFILQPFSSAVQYQVQVIYC*HSASES
Trigger: AGACTCACTGGCCGAATGGCAGCAGTAGATGACTTG...AACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp CCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGCATAGAGATCTGGATTaGTGCGGATATATAACCTCA +
Preference number: 4 (lower is better)
Translates to: PHQSFYCSATSGWLTFGEHRDLD*CGYITS
Trigger: TGAGGTTATATATCCGCAGCAATCCAGATCTCTATG...CTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACACAATTGTGGCCAATaGAACGCGTCGGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: GIYFAAIQFSCPVSGYQRHNCGQ*NASVIL
Trigger: GAGGATAACCGACGCGTTGCATTGGCCACAATTGTG...TCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTTGGCTCTGCTCATTCTaGTTTCCTGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: FCSHSVQLSSIRLPKTNFWLCSF*FPAVDA
Trigger: GGCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCA...AAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGTTTTTCCCGGGTATTaGCAAAAGAGATCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: WEFVPLHQFCWLCSFCFPVFPGY*QKRSFN
Trigger: ATTAAAGGATCTCTTTTGCCAATACCCGGGAAAAAC...AGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCATGGCAAAGACCAACGTaGCACATATCCAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPFSSAVQYQVTKDKFSWQRPT*HISKRG
Trigger: GCCCCTTTTGGATATGTGCCACGTTGGTCTTTGCCA...TGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ATTTGGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IWREEDPPGSLYIIQREDSNCLV*SSCSCW
Trigger: CCAACAACTACAGCTACTCCAAACCAAACAGTTGCT...GTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCTCATTAGCTGGACTTaGCTGCAGCAACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: AIQFSCPVSGYQRQIFKLLISWT*LQQLFG
Trigger: ACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAG...GAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTAATTTCCTCATTAGCTaGACTTGGCTGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: RQIFKLPVNPHQSFYCSANFLIS*TWLQQL
Trigger: CAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAATT...AGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000371399.5
CDS-3UTR CCA 90 bp TGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACAATTTCCTCATTAGCTaGACTTGGCTGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: CPVSGYQRQIFKLPVNPHNFLIS*TWLQQL
Trigger: CAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAATT...GTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000371399.5
CDS-3UTR CCA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCTCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTSAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCTCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLISAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGAGGATGGCTAACATTTaGAGAGAAGAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: IQFSCPVSGYQRQIFKLPRMANI*REEDPP
Trigger: TGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCT...CGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTTCGGCTACTTCAGGATaGCTAACATTTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RQIFKLPVNPHQSFYCSASATSG*LTFGEK
Trigger: CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGA...AGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAGTCGGCTACTTCAGGATaGCTAACATTTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PKFLLFGYFRMANIWREESATSG*LTFGEK
Trigger: CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGA...CTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp ATTTGGAGAGAAGAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACCATAGAGATCTGGATTaGTGCGGATATATAACCTCA +
Preference number: 4 (lower is better)
Translates to: IWREEDPPGSLYIIQREDHRDLD*CGYITS
Trigger: TGAGGTTATATATCCGCAGCAATCCAGATCTCTATG...GTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTCTTCTCTCCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCTTAGCTGGACTTGGCTaGAGCAACTGTTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFLAGLG*SNCLVW
Trigger: CCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAA...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCCTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFLSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACTTTCCTGCAGTGGATaGCACTTCCCAAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: GIYFAAIQFSCPVSGYQRLSCSG*HFPKNH
Trigger: ATGGTTCTTTGGGAAGTGGCATCCACTGCAGGAAAG...TCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp GTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VTKDKFSSSRLIPTKVSTYCGGI*VCCQRS
Trigger: ACTTCTCTGACAGCAAACCCAGATGCCACCACAGTA...AGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCCAATGTTTACTGTGGTaGCATCTGGGTTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTQCLLW*HLGLLS
Trigger: TGACAGCAAACCCAGATGCCACCACAGTAAACATTG...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TCATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTCCTCAATGTTTACTGTaGTGGCATCTGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SCEVFILQPFSSAVQYQVPQCLL*WHLGLL
Trigger: CAGCAAACCCAGATGCCACCACAGTAAACATTGAGG...AACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ATGGTTCTATTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGTCCTGGCTGATGTTTTaGGGTTTCACCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: MVLFQVLRYHSEACHLTVSWLMF*GFTRIL
Trigger: GAGGATCCTGGTGAAACCCCAAAACATCAGCCAGGA...CACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp AGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTCAACGAACAGCTTTCTaGGGGATAATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: RQIFKLPVNPHQSFYCSAQRTAF*GIIHSI
Trigger: AATACTGTGGATTATCCCCCAGAAAGCTGTTCGTTG...AGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTATCTGCTTTCCTGCAGTaGATGCCACTTCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HVRYLFCSHSVQLSSIRLSAFLQ*MPLPKE
Trigger: TTCTTTGGGAAGTGGCATCCACTGCAGGAAAGCAGA...TAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTTTCCTCATTAGCTaGACTTGGCTGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: YQVTKDKFSSSRLIPTKVSFLIS*TWLQQL
Trigger: CAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAAGA...AACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS-3UTR TCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCATGATCATCCATGGGTaGAAAGGAAGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLIMIIHG*KGRAER
Trigger: TCTTTCAGCTCTTCCTTTTCACCCATGGATGATCAT...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GGTAGTCTGTACATAATTCAGAGAGAGGACATCAGAATTTTCCATGGTTCTATTGTGAAGCATGTCATTTaGCTGTGGTGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSLYIIQREDIRIFHGSIVKHVI*LWWQRD
Trigger: GTCCCTTTGCCACCACAGTCAAATGACATGCTTCAC...AATAGAACCATGGAAAATTCTGATGTCCTCTCTCTGAATTATGTACAGACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp AGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCATTAAGGTACCACAGTaGAGCATGTCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: SCPVSGYQRQIFKLPVNPIKVPQ*SMSFDC
Trigger: ACAGTCAAATGACATGCTTCACTGTGGTACCTTAAT...GGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp AGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCATAGAGATCTGGATTaGTGCGGATATATAACCTCA +
Preference number: 4 (lower is better)
Translates to: SCPVSGYQRQIFKLPVNPHRDLD*CGYITS
Trigger: TGAGGTTATATATCCGCAGCAATCCAGATCTCTATG...GGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp AGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTAAGATTCCCACTAATTaGTATGGCAAAGACCAACGT +
Preference number: 4 (lower is better)
Translates to: RQIFKLPVNPHQSFYCSAKIPTN*YGKDQR
Trigger: ACGTTGGTCTTTGCCATAGCAATTAGTGGGAATCTT...AGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp CACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAAGATTCCCACTAATTaGTATGGCAAAGACCAACGT +
Preference number: 4 (lower is better)
Translates to: HQSFYCSATSGWLTFGEKKIPTN*YGKDQR
Trigger: ACGTTGGTCTTTGCCATAGCAATTAGTGGGAATCTT...CTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCTTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTLLSEK*LHCQIL
Trigger: AAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAA...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCAACGAACAGCTTTCTaGGGGATAATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLIQRTAF*GIIHSI
Trigger: AATACTGTGGATTATCCCCCAGAAAGCTGTTCGTTG...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTATCCTCACGAACAGCTaGCCAAAATGTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: TKDKFSSSRLIPTKVSTVILTNS*PKCHCQ
Trigger: TTGGCAATGACATTTTGGCCAGCTGTTCGTGAGGAT...AACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp TTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCATTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTC +
Preference number: 4 (lower is better)
Translates to: LQPFSSAVQYQVTKDKFSLLSEK*LHCQIL
Trigger: GAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAA...TGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS-3UTR TCA 90 bp ATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGCACAATCTCCAGAAATaGATAGGAGACGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: IQFSCPVSGYQRQIFKLPHNLQK*IGDDVH
Trigger: ATGAACATCGTCTCCTATTCATTTCTGGAGATTGTG...CGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GTTCTATTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGATGATCATCCATGGGTaGAAAGGAAGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VLFQVLRYHSEACHLTVVMIIHG*KGRAER
Trigger: TCTTTCAGCTCTTCCTTTTCACCCATGGATGATCAT...CACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp TCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCTGTCAGAGAAGTGGCTaGATTGCCAAATTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SAVQYQVTKDKFSSSRLICQRSG*IAKFFK
Trigger: TTTGAAGAATTTGGCAATGCAGCCACTTCTCTGACA...GATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR GCA 90 bp GCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCAAGATTCCCACTAATTaGTATGGCAAAGACCAACGT +
Preference number: 4 (lower is better)
Translates to: AIQFSCPVSGYQRQIFKLKIPTN*YGKDQR
Trigger: ACGTTGGTCTTTGCCATAGCAATTAGTGGGAATCTT...GAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp CCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAGAGGTTTTTCCCGGGTATTaGCAAAAGAGATCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: PKFLLFGYFRMANIWREEVFPGY*QKRSFN
Trigger: ATTAAAGGATCTCTTTTGCCAATACCCGGGAAAAAC...CTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCAACGAACAGCTTTCTaGGGGATAATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: TKDKFSSSRLIPTKVSTVQRTAF*GIIHSI
Trigger: AATACTGTGGATTATCCCCCAGAAAGCTGTTCGTTG...AACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CCA 90 bp ATGGTTCTATTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGATCCTCACGAACAGCTaGCCAAAATGTCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: MVLFQVLRYHSEACHLTVILTNS*PKCHCQ
Trigger: TTGGCAATGACATTTTGGCCAGCTGTTCGTGAGGAT...CACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp ACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTATTAAGGTACCACAGTaGAGCATGTCATTTGACTGT +
Preference number: 4 (lower is better)
Translates to: TKDKFSSSRLIPTKVSTVIKVPQ*SMSFDC
Trigger: ACAGTCAAATGACATGCTTCACTGTGGTACCTTAAT...AACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR GCA 90 bp GTTCTATTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGCCAAATTCTTCAAATTaGAAGTCATCTACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLFQVLRYHSEACHLTVVPNSSN*KSSTAA
Trigger: GGCAGCAGTAGATGACTTGCAATTTGAAGAATTTGG...CACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CCA 90 bp GTTCTATTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGGTTTTTCCCGGGTATTaGCAAAAGAGATCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: VLFQVLRYHSEACHLTVVVFPGY*QKRSFN
Trigger: ATTAAAGGATCTCTTTTGCCAATACCCGGGAAAAAC...CACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAATAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR TCA 90 bp GGTAGTCTGTACATAATTCAGAGAGAGGACATCAGAATTTTCCATGGTTCTATTCACAATCTCCAGAAATaGATAGGAGACGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: GSLYIIQREDIRIFHGSIHNLQK*IGDDVH
Trigger: ATGAACATCGTCTCCTATTCATTTCTGGAGATTGTG...AATAGAACCATGGAAAATTCTGATGTCCTCTCTCTGAATTATGTACAGACTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CCA 90 bp TGCATTGCCAAATTCTTGTGTCAGCTTTCCCCACCATCCGTGATCTaGAACACAAGTGTTCTCCCAATCCTCGCGGGGTTAGGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: CIAKFLCQLSPPSVI*NTSVLPILAGLGVP
Trigger: GGGGACGCCTAACCCCGCGAGGATTGGGAGAACACTTGTGTTCCAGATCACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS-3UTR CAA 90 bp CCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PSRHWEFVPLHQFCWLCSWWHLG*LSEKWL
Trigger: CAGCCACTTCTCTGACAGCAAACCCAGATGCCACCA...TGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGAGAGAAGTGGCTGCATaGCCAAATTCTCGCGGGGTT +
Preference number: 5 (lower is better)
Translates to: LCHSISSAGSAHSAFLQWREVAA*PNSRGV
Trigger: AACCCCGCGAGAATTTGGCAATGCAGCCACTTCTCT...CCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS-3UTR CAA 90 bp TGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: WEFVPLHQFCWLCSFCFPWWHLG*LSEKWL
Trigger: CAGCCACTTCTCTGACAGCAAACCCAGATGCCACCA...AGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp ATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: MSFDCGGKGTALSMPNLFWWHLG*LSEKWL
Trigger: CAGCCACTTCTCTGACAGCAAACCCAGATGCCACCA...GAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp GCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGCACACAATTGTCACAATaGTGGCCAATGCAACGCGTC +
Preference number: 5 (lower is better)
Translates to: ATPSVLLALLILLSCSGCTQLSQ*WPMQRV
Trigger: GACGCGTTGCATTGGCCACAATTGTGACAATTGTGT...GCATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGGATGGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: CHSISSAGSAHSAFLQWMGCSNC*VWSSCS
Trigger: ACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCC...CATCCACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp AAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGGGAATTTGTGCCAGTGAAGCATGTCATTaGACTGTGGTGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: KRVIRRQCGTIQTLGICASEACH*TVVAKG
Trigger: TCCCTTTGCCACCACAGTCAAATGACATGCTTCACT...GGCACAAATTCCCAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGATCCTGGCTGATGTTTaGGGGTTTCACCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: FVPLHQFCWLCSFCFPAVILADV*GFHQDP
Trigger: AGGATCCTGGTGAAACCCCAAAACATCAGCCAGGAT...CACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp ACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCAGTGAAGCATGTCATTaGACTGTGGTGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: TIQTLGICATPSVLLALLSEACH*TVVAKG
Trigger: TCCCTTTGCCACCACAGTCAAATGACATGCTTCACT...GAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TGTGGCACCATCCAGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTTATGAGGAAGAAAATTaGCAGGGTTCTCGCGGGGTT +
Preference number: 5 (lower is better)
Translates to: CGTIQTLGICATPSVLLAYEEEN*QGSRGV
Trigger: AACCCCGCGAGAACCCTGCAAATTTTCTTCCTCATA...AGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGGATGGTGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS GCA 90 bp TTACTGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTGGCTGCATTaGCAAATTCTTGTGTCAGCTTTCCCCACCATCCGTGATCTGGAA +
Preference number: 5 (lower is better)
Translates to: LLWWHLGLLSEKWLH*QILVSAFPTIRDLE
Trigger: TTCCAGATCACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CCA 90 bp AGCCCACAGAAAGCAGCATATGGAGCAACACAATTGTCACAATTGTaGCCAATGCAACGCGTCGGTTATCCTCACGAACAGCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SPQKAAYGATQLSQL*PMQRVGYPHEQLAK
Trigger: TTTGGCCAGCTGTTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CCA 90 bp TTTTGGGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTCGCGG +
Preference number: 5 (lower is better)
Translates to: FWGFTRILNVYCGGI*VCCQRSGCIAKFSR
Trigger: CCGCGAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS CCA 90 bp CCTCAATGTTTACTGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTTGTGTCAGCTTTCCCCACCATCCGT +
Preference number: 5 (lower is better)
Translates to: PQCLLWWHLGLLSEK*LHCQILVSAFPTIR
Trigger: ACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS GCA 90 bp AATGTTTACTGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTGGCTaGATTGCCAAATTCTTGTGTCAGCTTTCCCCACCATCCGTGATC +
Preference number: 5 (lower is better)
Translates to: NVYCGGIWVCCQRSG*IAKFLCQLSPPSVI
Trigger: GATCACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CCA 90 bp AGTCTTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGGGAGATGGTCCATCTCTGGTGCATC +
Preference number: 5 (lower is better)
Translates to: SLSSLAGLGCSNCLV*SSCSCWEMVHLWCI
Trigger: GATGCACCAGAGATGGACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS-3UTR CAA 90 bp CCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACACCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PVNPHQSFYCSATSGWLTPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...TGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CCA 90 bp AGAATTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGGGAGATGGTCCATCTCTGGTGCATC +
Preference number: 5 (lower is better)
Translates to: RISSLAGLGCSNCLV*SSCSCWEMVHLWCI
Trigger: GATGCACCAGAGATGGACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000371399.5
CDS-3UTR CAA 90 bp AGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCAGAGAAGTGGCTGCATaGCCAAATTCTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: SSRLIPTKVSTVRLLQDGREVAA*PNSSNC
Trigger: GCAATTTGAAGAATTTGGCAATGCAGCCACTTCTCT...GCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CAA 90 bp TTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGAGAGAAGTGGCTGCATaGCCAAATTCTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: FVPLHQFCWLCSFCFPAVREVAA*PNSSNC
Trigger: GCAATTTGAAGAATTTGGCAATGCAGCCACTTCTCT...CACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CAA 90 bp AGACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCGCAAGTAACTCAGTTTaGTCAGAGTCATCATTTCCC +
Preference number: 5 (lower is better)
Translates to: RHWEFVPLHQFCWLCSFCASNSV*SESSFP
Trigger: GGGAAATGATGACTCTGACAAAACTGAGTTACTTGC...GCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGTGTATGGAGCAACACAATaGTCACAATTGTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: FVPLHQFCWLCSFCFPAVYGATQ*SQLWPM
Trigger: CATTGGCCACAATTGTGACAATTGTGTTGCTCCATA...CACTGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTTCTGCTTGTTAAACGGGTGATTAGGCGCCAGTGTGGCACCATCCAGACACTGTATGGAGCAACACAATaGTCACAATTGTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: FLLVKRVIRRQCGTIQTLYGATQ*SQLWPM
Trigger: CATTGGCCACAATTGTGACAATTGTGTTGCTCCATA...CAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTTAACAAGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS GCA 90 bp AGAAAGCAGCATATGGAGCAACACAATTGTCACAATTGTGGCCAATaGAACGCGTCGGTTATCCTCACGAACAGCTGGCCAAAATGTCAT +
Preference number: 5 (lower is better)
Translates to: RKQHMEQHNCHNCGQ*NASVILTNSWPKCH
Trigger: ATGACATTTTGGCCAGCTGTTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CCA 90 bp TTTTGGGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: FWGFTRILNVYCGGI*VCCQRSGCIAKFLC
Trigger: ACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS-3UTR CAA 90 bp ATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCGCCAAATTCTTCAAATaGCAAGTCATCTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: MSFDCGGKGTALSMPNLFAKFFK*QVIYCC
Trigger: GCAGCAGTAGATGACTTGCAATTTGAAGAATTTGGC...GAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CAA 90 bp GAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTTCCTGCAGCCAAATTCTTCAAATaGCAAGTCATCTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: EFVPLHQFCWLCSFCFPAAKFFK*QVIYCC
Trigger: GCAGCAGTAGATGACTTGCAATTTGAAGAATTTGGC...TGCAGGAAAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000464950.6
CDS-3UTR CAA 90 bp ATGTCATTTGACTGTGGTGGCAAAGGGACGGCACTGAGCATGCCTAACCTATTCACGATGTTCATAACTTaGCTGTTTCTCCACATGAGG +
Preference number: 5 (lower is better)
Translates to: MSFDCGGKGTALSMPNLFTMFIT*LFLHMR
Trigger: CCTCATGTGGAGAAACAGCAAAGTTATGAACATCGT...GAATAGGTTAGGCATGCTCAGTGCCGTCCCTTTGCCACCACAGTCAAATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp GTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCACACAATTGTCACAATaGTGGCCAATGCAACGCGTC +
Preference number: 5 (lower is better)
Translates to: VQYQVTKDKFSSSRLIPTTQLSQ*WPMQRV
Trigger: GACGCGTTGCATTGGCCACAATTGTGACAATTGTGT...GGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp GAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACATCAGAATTTTCCCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: EDPPGSLYIIQREDIRIFPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...GAAAATTCTGATGTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CCA 90 bp TTTTGGGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FWGFTRILNVYCGGI*VCCQRSGCIAKFFK
Trigger: TTTGAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
CDS-3UTR CAA 90 bp CATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACAGACAGAGCTGGGTTaGATTCCCGATTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: HVRYLFCSHSVQLSSIRLQTELG*IPDSAA
Trigger: AGCAGCAGAATCGGGAATCAAACCCAGCTCTGTCTG...TAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR CAA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCATCCTGGCTGATGTTTaGGGGTTTCACCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTILADV*GFHQDP
Trigger: AGGATCCTGGTGAAACCCCAAAACATCAGCCAGGAT...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: CEVFILQPFSSAVQYQVTGCSNC*VWSSCS
Trigger: ACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCC...GGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp GCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAAGCTCCCAGACACTGGGAATTaGTGCCACTCCATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: AIQFSCPVSGYQRQIFKLPDTGN*CHSISS
Trigger: AGAACTGATGGAGTGGCACAAATTCCCAGTGTCTGG...GAGCTTGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGAGAAAATTTGCAGGGTTaGTGTGAATGTTTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGENLQG*CECLES
Trigger: GCTCTCTAAACATTCACACAAACCCTGCAAATTTTC...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR CAA 90 bp TTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCAATCCTGGCTGATGTTTaGGGGTTTCACCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: LQPFSSAVQYQVTKDKFSILADV*GFHQDP
Trigger: AGGATCCTGGTGAAACCCCAAAACATCAGCCAGGAT...TGAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp ACACTGGGAATTTGTGCCACTCCATCAGTTCTGCTGGCTCTGCTCATTCTGCTTAGATGGATCAAGAAGTaGGAAAGATTCCCACTAATT +
Preference number: 5 (lower is better)
Translates to: TLGICATPSVLLALLILLRWIKK*ERFPLI
Trigger: AATTAGTGGGAATCTTTCCAACTTCTTGATCCATCT...AAGCAGAATGAGCAGAGCCAGCAGAACTGATGGAGTGGCACAAATTCCCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TTTCAGGTATTAAGGTACCACAGTGAAGCATGTCATTTGACTGTGGTGGCAAAGACACAATTGTCACAATaGTGGCCAATGCAACGCGTC +
Preference number: 5 (lower is better)
Translates to: FQVLRYHSEACHLTVVAKTQLSQ*WPMQRV
Trigger: GACGCGTTGCATTGGCCACAATTGTGACAATTGTGT...CTTTGCCACCACAGTCAAATGACATGCTTCACTGTGGTACCTTAATACCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TCATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SCEVFILQPFSSAVQYQVGCSNC*VWSSCS
Trigger: ACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCC...AACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS GCA 90 bp AGTGGCTGCATTGCCAAATTCTTCAAATTGCAAGTCATCTACTGCTaGCATTCGGCCAGTGAGTCTTCTCCCAATTATGAGGAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: SGCIAKFFKLQVIYC*HSASESSPNYEEEN
Trigger: ATTTTCTTCCTCATAATTGGGAGAAGACTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAATTTGAAGAATTTGGCAATGCAGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
CDS-3UTR CAA 90 bp TTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATATGAGGAAGAAAATTaGCAGGGTTTGTGTGAATGT +
Preference number: 5 (lower is better)
Translates to: FKLPVNPHQSFYCSATSGYEEEN*QGLCEC
Trigger: ACATTCACACAAACCCTGCAAATTTTCTTCCTCATA...TCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000072644.7
CDS-3UTR CAA 90 bp TCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATAGATGGATCAAGAAGTaGGAAAGATTCCCACTAATT +
Preference number: 5 (lower is better)
Translates to: SSSRLIPTKVSTVRLLQDRWIKK*ERFPLI
Trigger: AATTAGTGGGAATCTTTCCAACTTCTTGATCCATCT...ATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp GAGGATCCCCCAGGTAGTCTGTACATAATTCAGAGAGAGGACATCAGAATTTTCACGATGTTCATAACTTaGCTGTTTCTCCACATGAGG +
Preference number: 5 (lower is better)
Translates to: EDPPGSLYIIQREDIRIFTMFIT*LFLHMR
Trigger: CCTCATGTGGAGAAACAGCAAAGTTATGAACATCGT...GAAAATTCTGATGTCCTCTCTCTGAATTATGTACAGACTACCTGGGGGATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp CATGTGAGGTATTTATTTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTAAGTGAAGCATGTCATTaGACTGTGGTGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: HVRYLFCSHSVQLSSIRLSEACH*TVVAKG
Trigger: TCCCTTTGCCACCACAGTCAAATGACATGCTTCACT...TAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAAATAAATACCTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS GCA 90 bp TTCTTCTGTCCAGCAAGTAACTTCAAATTGCAAGTCATCTACTGCTaGCATTCGGCCAGTGAGTCTTCTCCCAATTATGAGGAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: FFCPASNFKLQVIYC*HSASESSPNYEEEN
Trigger: ATTTTCTTCCTCATAATTGGGAGAAGACTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAATTTGAAGTTACTTGCTGGACAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469457.5
CDS-3UTR CAA 90 bp TTTGCAGCCATTCAGTTCAGCTGTCCAGTATCAGGTTACCAAAGACAAATTTTCGCAAGTAACTCAGTTTaGTCAGAGTCATCATTTCCC +
Preference number: 5 (lower is better)
Translates to: FAAIQFSCPVSGYQRQIFASNSV*SESSFP
Trigger: GGGAAATGATGACTCTGACAAAACTGAGTTACTTGC...GAAAATTTGTCTTTGGTAACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp ACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTGCAAGTAACTCAGTTTaGTCAGAGTCATCATTTCCC +
Preference number: 5 (lower is better)
Translates to: TKDKFSSSRLIPTKVSTVASNSV*SESSFP
Trigger: GGGAAATGATGACTCTGACAAAACTGAGTTACTTGC...AACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp CCACCAAAGTTTCTACTGTTCGGCTACTTCAGGATGGCTAACATTTGGAGAGAAAGATGGATCAAGAAGTaGGAAAGATTCCCACTAATT +
Preference number: 5 (lower is better)
Translates to: PPKFLLFGYFRMANIWRERWIKK*ERFPLI
Trigger: AATTAGTGGGAATCTTTCCAACTTCTTGATCCATCT...TTCTCTCCAAATGTTAGCCATCCTGAAGTAGCCGAACAGTAGAAACTTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp ACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTCTACTGTTACGATGTTCATAACTTaGCTGTTTCTCCACATGAGG +
Preference number: 5 (lower is better)
Translates to: TKDKFSSSRLIPTKVSTVTMFIT*LFLHMR
Trigger: CCTCATGTGGAGAAACAGCAAAGTTATGAACATCGT...AACAGTAGAAACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS-3UTR CAA 90 bp TATCAGGTTACCAAAGACAAATTTTCAAGCTCCCGGTTAATCCCCACCAAAGTTTATGGAGCAACACAATaGTCACAATTGTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: YQVTKDKFSSSRLIPTKVYGATQ*SQLWPM
Trigger: CATTGGCCACAATTGTGACAATTGTGTTGCTCCATA...AACTTTGGTGGGGATTAACCGGGAGCTTGAAAATTTGTCTTTGGTAACCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CAA 72 bp GGCGTCCCCCGGGTCCCGAGAAGGCTCGGGCCTCAGTaGCTCCGCGCCGGTTTCGGTCCAGCCCAGTTGCCG +
Preference number: 6 (lower is better)
Translates to: GVPRVPRRLGPQ*LRAGFGPAQLP
Trigger: CGGCAACTGGGCTGGACCGAAACCGGCGCGGAGCAACTGAGGCCCGAGCCTTCTCGGGACCCGGGGGACGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000480151.5
CDS GCA 72 bp CTGGGGTCAGACAGAGCTGGGTTTGATTCCCGATTCTaGTGCTTCTCTGCTGTATGCGCGCTCCTCGCGGCC +
Preference number: 6 (lower is better)
Translates to: LGSDRAGFDSRF*CFSAVCALLAA
Trigger: GGCCGCGAGGAGCGCGCATACAGCAGAGAAGCAGCAGAATCGGGAATCAAACCCAGCTCTGTCTGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000469457.5
ENST00000472983.1
CDS GCA 72 bp GGGTCAGACAGAGCTGGGTTTGATTCCCGATTCTGCTaGTTCTCTGCTGTATGCGCGCTCCTCGCGGCCTCA +
Preference number: 6 (lower is better)
Translates to: GSDRAGFDSRFC*FSAVCALLAAS
Trigger: TGAGGCCGCGAGGAGCGCGCATACAGCAGAGAAGCAGCAGAATCGGGAATCAAACCCAGCTCTGTCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000469457.5
ENST00000472983.1
CDS CCA 72 bp TTACTGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTCGCGGGGTTAGGCGTC +
Preference number: 6 (lower is better)
Translates to: LLWWHLGLLSEK*LHCQILAGLGV
Trigger: GACGCCTAACCCCGCGAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS CAA 90 bp AGCAGCCCACAGAAAGCAGCATATGGAGCAACACAATTGTCACAATaGTGGCCAATGCAACGCGTCGGTTATCCTCACGAACAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SSPQKAAYGATQLSQ*WPMQRVGYPHEQLA
Trigger: GGCCAGCTGTTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCTGTGGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CAA 90 bp GGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTCGCGGGGTTA +
Preference number: 6 (lower is better)
Translates to: GFHQDPQCLLWWHLG*LSEKWLHCQILAGL
Trigger: TAACCCCGCGAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS TCA 72 bp TTGCCAAATTCTTGTGTCAGCTTTCCCCACCATCCGTaGTCTGGAACACAAGTGTTCTCCCAATCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: LPNSCVSFPHHP*SGTQVFSQSSR
Trigger: CCGCGAGGATTGGGAGAACACTTGTGTTCCAGATCACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS GCA 72 bp TGGCATCTGGGTTTGCTGTCAGAGAAGTGGCTGCATTaGCAAATTCTTGTGTCAGCTTTCCCCACCATCCGT +
Preference number: 6 (lower is better)
Translates to: WHLGLLSEKWLH*QILVSAFPTIR
Trigger: ACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CAA 72 bp CTCTTCCTGAGCCTCTTGGGGATCCTGGCTGATGTTTaGGGGTTTCACCAGGATCCTCAATGTTTACTGTGG +
Preference number: 6 (lower is better)
Translates to: LFLSLLGILADV*GFHQDPQCLLW
Trigger: CCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAACATCAGCCAGGATCCCCAAGAGGCTCAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS CAA 90 bp CATCTTCTTCTCTTCCTGAGCCTCTTGGGGATCCTGGCTGATGTTTaGGGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: HLLLFLSLLGILADV*GFHQDPQCLLWWHL
Trigger: CAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAACATCAGCCAGGATCCCCAAGAGGCTCAGGAAGAGAAGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS GCA 72 bp CATATGGAGCAACACAATTGTCACAATTGTGGCCAATaGAACGCGTCGGTTATCCTCACGAACAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: HMEQHNCHNCGQ*NASVILTNSWP
Trigger: TGGCCAGCTGTTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CCA 72 bp TTGGGGTTTCACCAGGATCCTCAATGTTTACTGTGGTaGCATCTGGGTTTGCTGTCAGAGAAGTGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: LGFHQDPQCLLW*HLGLLSEKWLH
Trigger: ATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS CCA 72 bp GTTTTGGGGTTTCACCAGGATCCTCAATGTTTACTGTaGTGGCATCTGGGTTTGCTGTCAGAGAAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: VLGFHQDPQCLL*WHLGLLSEKWL
Trigger: CAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS CCA 72 bp AAATTCTTGTGTCAGCTTTCCCCACCATCCGTGATCTaGAACACAAGTGTTCTCCCAATCCTCGCGGGGTTA +
Preference number: 6 (lower is better)
Translates to: KFLCQLSPPSVI*NTSVLPILAGL
Trigger: TAACCCCGCGAGGATTGGGAGAACACTTGTGTTCCAGATCACGGATGGTGGGGAAAGCTGACACAAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CCA 72 bp TTACTGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTaGCTGCATTGCCAAATTCTTGTGTCAGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: LLWWHLGLLSEK*LHCQILVSAFP
Trigger: GGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CAA 72 bp GTTTGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTaGTGTCAGCTTTCCCCACCATCCGTGATCTGGAAC +
Preference number: 6 (lower is better)
Translates to: VCCQRSGCIAKF*CQLSPPSVIWN
Trigger: GTTCCAGATCACGGATGGTGGGGAAAGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CAA 90 bp AGTATGCCAAGCAGCCCACAGAAAGCAGCATATGGAGCAACACAATaGTCACAATTGTGGCCAATGCAACGCGTCGGTTATCCTCACGAA +
Preference number: 6 (lower is better)
Translates to: SMPSSPQKAAYGATQ*SQLWPMQRVGYPHE
Trigger: TTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCTGTGGGCTGCTTGGCATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CAA 90 bp CAAGTGAGTCTTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGTTGTTGGGAGATGGTCCATCTCTGG +
Preference number: 6 (lower is better)
Translates to: QVSLSSLAGLGCSNC*VWSSCSCWEMVHLW
Trigger: CCAGAGATGGACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAAGACTCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS CAA 90 bp GGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTTGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: GFHQDPQCLLWWHLG*LSEKWLHCQILVSA
Trigger: AGCTGACACAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480151.5
CDS CCA 72 bp TTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTaGGTTTGCTGTCAGAGAAGTGGCTGCATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: FTRILNVYCGGI*VCCQRSGCIAK
Trigger: TTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS CCA 72 bp TCATTAGCTGGACTTGGCTGCAGCAACTGTTTGGTTTaGAGTAGCTGTAGTTGTTGGGAGATGGTCCATCTC +
Preference number: 6 (lower is better)
Translates to: SLAGLGCSNCLV*SSCSCWEMVHL
Trigger: GAGATGGACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS CAA 72 bp CAGGATCCTCAATGTTTACTGTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTC +
Preference number: 6 (lower is better)
Translates to: QDPQCLLWWHLG*LSEKWLHCQIL
Trigger: GAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371399.5
CDS CAA 72 bp CTTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGTTGTTGGGAGATGGTC +
Preference number: 6 (lower is better)
Translates to: LSSLAGLGCSNC*VWSSCSCWEMV
Trigger: GACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464950.6
CDS CAA 72 bp TCTTCTGTCCAGCAAGTAAGGAAAGTAATGGTCTGTTaGCCTGTTTCCCCCACCAAGGAAGAGGCCATGTGT +
Preference number: 6 (lower is better)
Translates to: SSVQQVRKVMVC*PVSPTKEEAMC
Trigger: ACACATGGCCTCTTCCTTGGTGGGGGAAACAGGCAAACAGACCATTACTTTCCTTACTTGCTGGACAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465897.5
ENST00000472983.1
CDS CAA 90 bp GGGAGCTTTTCTTCTGTCCAGCAAGTAAGGAAAGTAATGGTCTGTTaGCCTGTTTCCCCCACCAAGGAAGAGGCCATGTGTCATTTACCT +
Preference number: 6 (lower is better)
Translates to: GSFSSVQQVRKVMVC*PVSPTKEEAMCHLP
Trigger: AGGTAAATGACACATGGCCTCTTCCTTGGTGGGGGAAACAGGCAAACAGACCATTACTTTCCTTACTTGCTGGACAGAAGAAAAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465897.5
ENST00000472983.1
CDS CAA 90 bp GGGTTTCACCAGGATCCTCAATGTTTACTGTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTTCAAATTGCA +
Preference number: 6 (lower is better)
Translates to: GFHQDPQCLLWWHLG*LSEKWLHCQILQIA
Trigger: TGCAATTTGAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTGGTGAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
CDS CAA 90 bp CAAAAGAGAATTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGTTGTTGGGAGATGGTCCATCTCTGG +
Preference number: 6 (lower is better)
Translates to: QKRISSLAGLGCSNC*VWSSCSCWEMVHLW
Trigger: CCAGAGATGGACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAATTCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000371399.5
CDS GCA 72 bp GAAGAGGCCATGTGTCATTTACCTCTGAGCTGTCATTaGCTGACACTGTACCTCAGTTTTGTCAGAGTCATC +
Preference number: 6 (lower is better)
Translates to: EEAMCHLPLSCH*LTLYLSFVRVI
Trigger: GATGACTCTGACAAAACTGAGGTACAGTGTCAGGCAATGACAGCTCAGAGGTAAATGACACATGGCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465897.5
ENST00000472983.1
CDS CCA 72 bp AAAGCAGCATATGGAGCAACACAATTGTCACAATTGTaGCCAATGCAACGCGTCGGTTATCCTCACGAACAG +
Preference number: 6 (lower is better)
Translates to: KAAYGATQLSQL*PMQRVGYPHEQ
Trigger: CTGTTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CAA 72 bp CAGGATCCTCAATGTTTACTGTGGTGGCATCTGGGTTaGCTGTCAGAGAAGTGGCTGCATTGCCAAATTCTT +
Preference number: 6 (lower is better)
Translates to: QDPQCLLWWHLG*LSEKWLHCQIL
Trigger: AAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACAGTAAACATTGAGGATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
ENST00000480151.5
CDS CAA 72 bp CAGAAAGCAGCATATGGAGCAACACAATTGTCACAATaGTGGCCAATGCAACGCGTCGGTTATCCTCACGAA +
Preference number: 6 (lower is better)
Translates to: QKAAYGATQLSQ*WPMQRVGYPHE
Trigger: TTCGTGAGGATAACCGACGCGTTGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000469457.5
ENST00000480151.5
CDS CAA 72 bp ATTTCCTCATTAGCTGGACTTGGCTGCAGCAACTGTTaGGTTTGGAGTAGCTGTAGTTGTTGGGAGATGGTC +
Preference number: 6 (lower is better)
Translates to: ISSLAGLGCSNC*VWSSCSCWEMV
Trigger: GACCATCTCCCAACAACTACAGCTACTCCAAACCAAACAGTTGCTGCAGCCAAGTCCAGCTAATGAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000072644.7
ENST00000371399.5
CDS CAA 72 bp GGAAGAGGCCATGTGTCATTTACCTCTGAGCTGTCATaGCCTGACACTGTACCTCAGTTTTGTCAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: GRGHVSFTSELS*PDTVPQFCQSH
Trigger: ATGACTCTGACAAAACTGAGGTACAGTGTCAGGCAATGACAGCTCAGAGGTAAATGACACATGGCCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465897.5
ENST00000472983.1
CDS GCA 72 bp TGTGGTGGCATCTGGGTTTGCTGTCAGAGAAGTGGCTaGATTGCCAAATTCTTCAAATTGCAAGTCATCTAC +
Preference number: 6 (lower is better)
Translates to: CGGIWVCCQRSG*IAKFFKLQVIY
Trigger: GTAGATGACTTGCAATTTGAAGAATTTGGCAATGCAGCCACTTCTCTGACAGCAAACCCAGATGCCACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
CDS GCA 72 bp CCAGCAAGTAACTTCAAATTGCAAGTCATCTACTGCTaGCATTCGGCCAGTGAGTCTTCTCCCAATTATGAG +
Preference number: 6 (lower is better)
Translates to: PASNFKLQVIYC*HSASESSPNYE
Trigger: CTCATAATTGGGAGAAGACTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAATTTGAAGTTACTTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469457.5
CDS GCA 72 bp TGTCCAGCAAGTAACTTCAAATTGCAAGTCATCTACTaGTGCCATTCGGCCAGTGAGTCTTCTCCCAATTAT +
Preference number: 6 (lower is better)
Translates to: CPASNFKLQVIY*CHSASESSPNY
Trigger: ATAATTGGGAGAAGACTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAATTTGAAGTTACTTGCTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469457.5
CDS CCA 72 bp AAAAAGTATGCCAAGCAGCCCACAGAAAGCAGCATATaGAGCAACACAATTGTCACAATTGTGGCCAATGCA +
Preference number: 6 (lower is better)
Translates to: KKYAKQPTESSI*SNTIVTIVANA
Trigger: TGCATTGGCCACAATTGTGACAATTGTGTTGCTCCATATGCTGCTTTCTGTGGGCTGCTTGGCATACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
CDS GCA 72 bp TGCATTGCCAAATTCTTCAAATTGCAAGTCATCTACTaGTGCCATTCGGCCAGTGAGTCTTCTCCCAATTAT +
Preference number: 6 (lower is better)
Translates to: CIAKFFKLQVIY*CHSASESSPNY
Trigger: ATAATTGGGAGAAGACTCACTGGCCGAATGGCAGCAGTAGATGACTTGCAATTTGAAGAATTTGGCAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000072644.7
ENST00000464950.6
ENST00000465897.5
ENST00000472983.1
CDS CAA 72 bp GTCAAAGACCTGGTAGGTGTCCACATCAAAGAATGTTaGGTAGTATTCAAATGTCCAGAAGGGGGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: VKDLVGVHIKEC*VVFKCPEGGAF
Trigger: AAAAGCTCCCCCTTCTGGACATTTGAATACTACCAAACATTCTTTGATGTGGACACCTACCAGGTCTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000469457.5
ENST00000472983.1
ENST00000480151.5
CDS CAA 90 bp TTTAATTCTGTCAAAGACCTGGTAGGTGTCCACATCAAAGAATGTTaGGTAGTATTCAAATGTCCAGAAGGGGGAGCTTTTCTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FNSVKDLVGVHIKEC*VVFKCPEGGAFLLS
Trigger: GGACAGAAGAAAAGCTCCCCCTTCTGGACATTTGAATACTACCAAACATTCTTTGATGTGGACACCTACCAGGTCTTTGACAGAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000072644.7
ENST00000371399.5
ENST00000464950.6
ENST00000465897.5
ENST00000469457.5
ENST00000472983.1
ENST00000480151.5