Pregenerated sensors for YIF1A (Homo sapiens)
Ensembl gene IDs: ENSG00000174851Ensembl transcript IDs: ENST00000359461.10, ENST00000376899.8, ENST00000376901.9, ENST00000431556.6, ENST00000471387.6, ENST00000474986.2, ENST00000484814.1, ENST00000485820.1, ENST00000494836.2, ENST00000496746.5, ENST00000526497.5, ENST00000528575.1, ENST00000534374.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAATGAAGGCCATCGCCTGGGTGTCCACGATGGGCCTGGCCCTGTaGAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VMKAIAWVSTMGLAL*SQQDREESAVCVGS Trigger: GCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAGGCCCATCGTGGACACCCAGGCGATGGCCTTCATTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCATATATGATGAGGGGCTaGAAGGCTGCAGCTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NSVPSGARGSPDQVESQPYMMRG*KAAAPR Trigger: TCTGGGAGCTGCAGCCTTCCAGCCCCTCATCATATA...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| 3UTR GCA 72 bp | GCCATCGCCTGGGTGTCCACGATGGGCCTGGCCCTGTaGAGCCAACAGGACAGAGAAGAGTCAGCTGTATGT | + |
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Preference number: 3 (lower is better) Translates to: AIAWVSTMGLAL*SQQDREESAVC Trigger: ACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAGGCCCATCGTGGACACCCAGGCGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| 3UTR GCA 72 bp | GAGCACACTGAGGATCATTCTTTTCTGAATGCCCAGTaGCATCCCAGCCAGGAGCACGTAAGTAATGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EHTEDHSFLNAQ*HPSQEHVSNEG Trigger: GCCTTCATTACTTACGTGCTCCTGGCTGGGATGGCACTGGGCATTCAGAAAAGAATGATCCTCAGTGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCATCCCCGAGGGCCCGCTaGGCCGCCTCGTGGGTACGA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPSPRAR*AASWVR Trigger: TCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGA...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCTCCCCGAGGGCCCGCTaGGCCGCCTCGTGGGTACGA | + |
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Preference number: 4 (lower is better) Translates to: LALCSQQDREESAVCVGSSPRAR*AASWVR Trigger: TCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGA...GCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGTCGGGGCCCAGGGCTaGTGTCCGCAAAGAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPVGAQG*CPQRAH Trigger: GTGCGCTCTTTGCGGACAGCAGCCCTGGGCCCCGAC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | GCCATCGCCTGGGTGTCCACGATGGGCCTGGCCCTGTGCAGCCAACAGGACAGACCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AIAWVSTMGLALCSQQDRPSDKP*PRRSLS Trigger: GGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGG...TCTGTCCTGTTGGCTGCACAGGGCCAGGCCCATCGTGGACACCCAGGCGATGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR TCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPVHERR*GPGQRH Trigger: GTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTAC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGGTCACTGCGCACGGTaGCCAGGTAGAGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPGHCAR*PGRGPG Trigger: TCCTGGGCCTCTACCTGGCCACCGTGCGCAGTGACC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPPSDKP*PRRSLS Trigger: GGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCCCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCCTGGGTGTCCACGATaGGCCTGGCCCTGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGPVQPTGQRRVSCMCGQPGCPR*AWPCAA Trigger: GGCTGCACAGGGCCAGGCCCATCGTGGACACCCAGG...CTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR TCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGGAAGAAAGGAGAACTaGAGCCTGGCCAGGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPGRKEN*SLARRG Trigger: CCCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAAGGTGCTCAGGTCACTaGGCACGGTGGCCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPRCSGH*ARWPGR Trigger: TCTACCTGGCCACCGTGCGCAGTGACCTGAGCACCT...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACCAGCAGGTGAAAGGTaGTCAGGTCACTGCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPPAGER*SGHCAR Trigger: CCGTGCGCAGTGACCTGAGCACCTTTCACCTGCTGG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACAGGAGGGGGAGGTTTaGCCTCAAGTGAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPQEGEV*PQVKAG Trigger: CCCTGCCTTCACTTGAGGGCAAACCTCCCCCTCCTG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAAAACTCAGTGCCATCTaGGGCCAGGGGGTCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPKLSAI*GQGVTG Trigger: TCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTTT...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACGCTGCGCCGCCTCGTaGGTACGAATACTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPRCAAS*VRILMR Trigger: CCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAAGGAGAACTGAAGCCTaGCCAGGAGGGGGAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPRRTEA*PGGGGL Trigger: CAAACCTCCCCCTCCTGGCCAGGCTTCAGTTCTCCT...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCTGGTGTCCACGATGGGCCTaGCCCTGTGCAGCCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: ALCSQQDREESAVCVGSWCPRWA*PCAANR Trigger: CCTGTTGGCTGCACAGGGCCAGGCCCATCGTGGACA...CCAGCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR TCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGGGGAGAACCTTTTCTaGATGCCCAGTGCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPGENLF*MPSAIP Trigger: TGGGATGGCACTGGGCATTCAGAAAAGGTTCTCCCC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCATTTCTGAATGCCCAGTaGCATCCCAGCCAGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPFLNAQ*HPSQEH Trigger: GTGCTCCTGGCTGGGATGGCACTGGGCATTCAGAAA...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAGCATCACGACTGTACTaGACTTCCCAGTTCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPASRLY*TSQFVG Trigger: GCCCACGAACTGGGAAGTGCAGTACAGTCGTGATGC...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | GAGCACGTAAGTAATGAAGGCCATCGCCTGGGTGTCCACGATGGGCCTGGCCCTCGCTGCGCCGCCTCGTaGGTACGAATACTAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: EHVSNEGHRLGVHDGPGPRCAAS*VRILMR Trigger: CCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCG...AGGGCCAGGCCCATCGTGGACACCCAGGCGATGGCCTTCATTACTTACGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR CCA 90 bp | GAGCACGTAAGTAATGAAGGCCATCGCCTGGGTGTCCACGATGGGCCTGGCCCTGCAGCCCTAGCTTCTTaGCCACGTAGGCTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EHVSNEGHRLGVHDGPGPAALAS*PRRLCP Trigger: TGGACACAGCCTACGTGGCCAAGAAGCTAGGGCTGC...AGGGCCAGGCCCATCGTGGACACCCAGGCGATGGCCTTCATTACTTACGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR CCA 90 bp | CAGGAGCACGTAAGTAATGAAGGCCATCGCCTGGGTGTCCACGATGGGCCTGGCGTATGTGTGGGCAGCTaGGGATATAGAGGTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QEHVSNEGHRLGVHDGPGVCVGS*GYRGQG Trigger: CCCCTGACCTCTATATCCCCAGCTGCCCACACATAC...GCCAGGCCCATCGTGGACACCCAGGCGATGGCCTTCATTACTTACGTGCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR GCA 90 bp | CCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCTGGGGTTTCTGAATGCCCAGTaGCATCCCAGCCAGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PVQPTGQRRVSCMCGQLGFLNAQ*HPSQEH Trigger: GTGCTCCTGGCTGGGATGGCACTGGGCATTCAGAAA...CCCCAGCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAAGAACCTTTTCTGAATaGCCAGTGCCATCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPRTFSE*PVPSQP Trigger: TGGCTGGGATGGCACTGGGCATTCAGAAAAGGTTCT...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACGCAAAGAGCGCACCTaGAAGAAAGGAGAACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NSVPSGARGSPDQVESQPRKERT*KKGELK Trigger: CTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTGCG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR GCA 90 bp | CCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCTGGGGGCATCACGACTGTACTaGACTTCCCAGTTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PVQPTGQRRVSCMCGQLGASRLY*TSQFWC Trigger: ACACCAGAACTGGGAAGTGCAGTACAGTCGTGATGC...CCCCAGCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR GCA 90 bp | GGGCCTGGCCCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGTCATTCTTTTCTGAATaGCCAGTGCCATCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPGPVQPTGQRRVSCMCGSFFSE*PVPSQP Trigger: TGGCTGGGATGGCACTGGGCATTCAGAAAAGAATGA...CCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR CCA 90 bp | AGCCAGGAGCACGTAAGTAATGAAGGCCATCGCCTGGGTGTCCACGATGGGCCTAGTCAGCTGTATGTGTaGGCAGCTGGGGATATAGAG | + |
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Preference number: 4 (lower is better) Translates to: SQEHVSNEGHRLGVHDGPSQLYV*AAGDIE Trigger: CTCTATATCCCCAGCTGCCCACACATACAGCTGACT...AGGCCCATCGTGGACACCCAGGCGATGGCCTTCATTACTTACGTGCTCCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTGTGCAGCCAACAGGACAGAGAAGAGTCAGCTGTATGTGTGGGCAGCAGGATCATTCTTTTCTaGATGCCCAGTGCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LALCSQQDREESAVCVGSRIILF*MPSAIP Trigger: TGGGATGGCACTGGGCATTCAGAAAAGAATGATCCT...GCTGCCCACACATACAGCTGACTCTTCTCTGTCCTGTTGGCTGCACAGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS CCA 90 bp | CCCTGTGCTTGGAGCCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGCGCCGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PCAWSRGLRSPSDKP*PRRSLSPRARCAAS Trigger: CGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGGCTCCAAGCACAGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS CCA 90 bp | TGGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGCGCCGCCTCGTaGGTACGAATACTAATGAGGCAGCTGCTCCGCGCCCAGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: WPRRSLSPRARCAAS*VRILMRQLLRAQGT Trigger: GGTACCCTGGGCGCGGAGCAGCTGCCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000471387.6 ENST00000474986.2 ENST00000484814.1 ENST00000534374.1 |
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| CDS CCA 90 bp | CTGCACTTCCCAGTTCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGCGCCGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LHFPVRGLRSPSDKP*PRRSLSPRARCAAS Trigger: CGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGAACTGGGAAGTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS CCA 90 bp | CACAAAACGGTGCAGCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGCGCCGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: HKTVQRGLRSPSDKP*PRRSLSPRARCAAS Trigger: CGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGCTGCACCGTTTTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS GCA 90 bp | AGTGATAAGCCATGGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTaGGCCGCCTCGTGGGTACGAATACTAATGAGGCAGCTGCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SDKPWPRRSLSPRAR*AASWVRILMRQLLR Trigger: GCGGAGCAGCTGCCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000471387.6 ENST00000474986.2 ENST00000484814.1 ENST00000534374.1 |
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| CDS CCA 90 bp | CCCATGCTGTCGGGGCCCAGGGCTGCTGTCCGCAAAGAGCGCACCTaGAAGAAAGGAGAACTGAAGCCTGGCCAGGAGGGGGAGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: PMLSGPRAAVRKERT*KKGELKPGQEGEVC Trigger: GCAAACCTCCCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTGCGGACAGCAGCCCTGGGCCCCGACAGCATGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS-3UTR CAA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCAACACCAGCGCTGTGCTaGCACACAGGCCCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: NSVPSGARGSPDQVESQPTPALC*HTGPAP Trigger: AGGTGCTGGGCCTGTGTGCAAGCACAGCGCTGGTGT...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS-3UTR CAA 90 bp | AACTCAGTGCCATCTGGGGCCAGGGGGTCACCGGACCAGGTGGAAAGTCAGCCACCAGGAGGGGGAGGTTaGCCCTCAAGTGAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NSVPSGARGSPDQVESQPPGGGG*PSSEGR Trigger: CCTGCCTTCACTTGAGGGCAAACCTCCCCCTCCTGG...TGGCTGACTTTCCACCTGGTCCGGTGACCCCCTGGCCCCAGATGGCACTGAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS GCA 90 bp | GGCCATTGGGTCCCCAAGCAAGTGGTTGACACTGAAGGCCACGTCTaGTCCTGTGGCTGGGTATCCCCCGGGCTGGCTGGAATAACCACC | + |
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Preference number: 5 (lower is better) Translates to: GHWVPKQVVDTEGHV*SCGWVSPGLAGITT Trigger: GGTGGTTATTCCAGCCAGCCCGGGGGATACCCAGCCACAGGAGCAGACGTGGCCTTCAGTGTCAACCACTTGCTTGGGGACCCAATGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000431556.6 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS TCA 90 bp | GGCTGCTGTCCGCAAAGAGCGCACAATGAAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCACGTAGTAGCCATCGCTGCCGAACAG | + |
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Preference number: 5 (lower is better) Translates to: GCCPQRAHNEVHERR*GPGQRHVVAIAAEQ Trigger: CTGTTCGGCAGCGATGGCTACTACGTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTACTTCATTGTGCGCTCTTTGCGGACAGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000359461.10 ENST00000376901.9 ENST00000494836.2 ENST00000496746.5 |
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| CDS TCA 90 bp | GCTGTCCGCAAAGAGCGCACTCACAATGAAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCACGTAGTAGCCATCGCTGCCGAACAG | + |
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Preference number: 5 (lower is better) Translates to: AVRKERTHNEVHERR*GPGQRHVVAIAAEQ Trigger: CTGTTCGGCAGCGATGGCTACTACGTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTACTTCATTGTGAGTGCGCTCTTTGCGGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526497.5 |
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| CDS CCA 90 bp | CCCAAGACTCGCAGAGTGACTCTCAACACCTCCCCAACCTCTGCATaGCACGCAGATCCTCAGGAGACTGCTGGAGACAGCTGCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: PKTRRVTLNTSPTSA*HADPQETAGDSCSL Trigger: GAGGGAGCAGCTGTCTCCAGCAGTCTCCTGAGGATCTGCGTGCCATGCAGAGGTTGGGGAGGTGTTGAGAGTCACTCTGCGAGTCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496746.5 |
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| CDS GCA 90 bp | TCTCCCCAAGACTCGCAGAGTGACTCTCAACACCTCCCCAACCTCTaGATGGCACGCAGATCCTCAGGAGACTGCTGGAGACAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SPQDSQSDSQHLPNL*MARRSSGDCWRQLL Trigger: GAGCAGCTGTCTCCAGCAGTCTCCTGAGGATCTGCGTGCCATGCAGAGGTTGGGGAGGTGTTGAGAGTCACTCTGCGAGTCTTGGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496746.5 |
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| CDS CCA 90 bp | TGCTGTCCGCAAAGAGCGCACCTGGAAGAAAGGAGAACTGAAGCCTaGCCAGGAGGGGGAGGTTTGCCCTCAAGTGAAGGCAGGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: CCPQRAHLEERRTEA*PGGGGLPSSEGRGM Trigger: CATTCCCCTGCCTTCACTTGAGGGCAAACCTCCCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTGCGGACAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS GCA 90 bp | CAACACCTCCCCAACCTCTGCATGGCACGCAGATCCTCAGGAGACTaGTGGAGACAGCTGCTCCCTCTTAACAGAGCAGTGCTAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: QHLPNLCMARRSSGD*WRQLLPLNRAVLEV Trigger: GACCTCTAGCACTGCTCTGTTAAGAGGGAGCAGCTGTCTCCAGCAGTCTCCTGAGGATCTGCGTGCCATGCAGAGGTTGGGGAGGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496746.5 |
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| CDS CCA 90 bp | CACCTCCCCAACCTCTGCATGGCACGCAGATCCTCAGGAGACTGCTaGAGACAGCTGCTCCCTCTTAACAGAGCAGTGCTAGAGGTCACT | + |
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Preference number: 5 (lower is better) Translates to: HLPNLCMARRSSGDC*RQLLPLNRAVLEVT Trigger: AGTGACCTCTAGCACTGCTCTGTTAAGAGGGAGCAGCTGTCTCCAGCAGTCTCCTGAGGATCTGCGTGCCATGCAGAGGTTGGGGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496746.5 |
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| CDS TCA 90 bp | CAAATCAAGAAACAGGAAGGTCTCAAAAGGGTGTCCTGGGGACACTaGAGGCGCATTCAGGAAGCTCCTTACTGGTCACCCTGCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: QIKKQEGLKRVSWGH*RRIQEAPYWSPCTA Trigger: GGCAGTGCAGGGTGACCAGTAAGGAGCTTCCTGAATGCGCCTTCAGTGTCCCCAGGACACCCTTTTGAGACCTTCCTGTTTCTTGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376899.8 ENST00000474986.2 |
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| CDS GCA 90 bp | CAGGAAGCTCCTTACTGGTCACCCTGCACTGCCTGCCTGGTGTCTTaGAACTGCCACACATACACAAAGCACCAAGAACAGATGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: QEAPYWSPCTACLVS*NCHTYTKHQEQMLT Trigger: AGTCAGCATCTGTTCTTGGTGCTTTGTGTATGTGTGGCAGTTGCAAGACACCAGGCAGGCAGTGCAGGGTGACCAGTAAGGAGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376899.8 ENST00000474986.2 |
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| CDS TCA 90 bp | TGTCTTGCAACTGCCACACATACACAAAGCACCAAGAACAGATGCTaGCTCAGTAGCTGCGCCTCTCTTCCCATTCATCCCTCAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: CLATATHTQSTKNRC*LSSCASLPIHPSRH Trigger: GTGCCTTGAGGGATGAATGGGAAGAGAGGCGCAGCTACTGAGTCAGCATCTGTTCTTGGTGCTTTGTGTATGTGTGGCAGTTGCAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376899.8 ENST00000474986.2 |
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| CDS CCA 72 bp | TGGAGCCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WSRGLRSPSDKP*PRRSLSPRARC Trigger: GCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGGCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS CCA 72 bp | GTGCAGCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VQRGLRSPSDKP*PRRSLSPRARC Trigger: GCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGCTGCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484814.1 |
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| CDS CCA 72 bp | CGCTCGCTGTCCCCGAGGGCCCGCTGCGCCGCCTCGTaGGTACGAATACTAATGAGGCAGCTGCTCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RSLSPRARCAAS*VRILMRQLLRA Trigger: GGCGCGGAGCAGCTGCCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000471387.6 ENST00000474986.2 ENST00000484814.1 ENST00000534374.1 |
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| CDS CCA 72 bp | CCAGTTCGTGGGCTCCGTAGCCCGAGTGATAAGCCATaGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PVRGLRSPSDKP*PRRSLSPRARC Trigger: GCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGGCTTATCACTCGGGCTACGGAGCCCACGAACTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471387.6 |
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| CDS GCA 72 bp | CCATGGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTaGGCCGCCTCGTGGGTACGAATACTAATGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PWPRRSLSPRAR*AASWVRILMRQ Trigger: CTGCCTCATTAGTATTCGTACCCACGAGGCGGCGCAGCGGGCCCTCGGGGACAGCGAGCGTCGCGGCCATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000471387.6 ENST00000474986.2 ENST00000484814.1 ENST00000534374.1 |
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| CDS GCA 72 bp | GCCACCCGTGCCCCGGGGGCAGGCCACACCTCCTTGTaGACCATGTCCTTCCCATGGGATGCGATGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATRAPGAGHTSL*TMSFPWDAMEL Trigger: CAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGGTGTGGCCTGCCCCCGGGGCACGGGTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534374.1 |
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| CDS CAA 72 bp | TCTGCCACCCGTGCCCCGGGGGCAGGCCACACCTCCTaGTGCACCATGTCCTTCCCATGGGATGCGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SATRAPGAGHTS*CTMSFPWDAME Trigger: CTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGGTGTGGCCTGCCCCCGGGGCACGGGTGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534374.1 |
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| CDS CCA 72 bp | TCGGGGCCCAGGGCTGCTGTCCGCAAAGAGCGCACCTaGAAGAAAGGAGAACTGAAGCCTGGCCAGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGPRAAVRKERT*KKGELKPGQEG Trigger: CCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTGCGGACAGCAGCCCTGGGCCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS GCA 72 bp | GTCCCCAAGCAAGTGGTTGACACTGAAGGCCACGTCTaGTCCTGTGGCTGGGTATCCCCCGGGCTGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VPKQVVDTEGHV*SCGWVSPGLAG Trigger: TCCAGCCAGCCCGGGGGATACCCAGCCACAGGAGCAGACGTGGCCTTCAGTGTCAACCACTTGCTTGGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000431556.6 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS TCA 72 bp | CCGCAAAGAGCGCACAATGAAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCACGTAGTAGCCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: PQRAHNEVHERR*GPGQRHVVAIA Trigger: AGCGATGGCTACTACGTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTACTTCATTGTGCGCTCTTTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000359461.10 ENST00000376901.9 ENST00000494836.2 ENST00000496746.5 |
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| CDS TCA 72 bp | CTGTCCGCAAAGAGCGCACCTGGAAGAAAGGAGAACTaGAGCCTGGCCAGGAGGGGGAGGTTTGCCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSAKSAPGRKEN*SLARRGRFALK Trigger: CTTGAGGGCAAACCTCCCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTGCGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS TCA 72 bp | GTGCACCAGACTCACAATGAAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCACGTAGTAGCCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: VHQTHNEVHERR*GPGQRHVVAIA Trigger: AGCGATGGCTACTACGTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTACTTCATTGTGAGTCTGGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS GCA 72 bp | GTGCAGCTCCTTGTGCACCATGTCCTTCCCATGGGATaGGATGGAGCTGCCATAGGCCATAGCCACATTGGC | + |
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Preference number: 6 (lower is better) Translates to: VQLLVHHVLPMG*DGAAIGHSHIG Trigger: GCCAATGTGGCTATGGCCTATGGCAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000431556.6 ENST00000528575.1 |
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| CDS GCA 72 bp | CCCAACCTCTGCATGGCACGCAGATCCTCAGGAGACTaGTGGAGACAGCTGCTCCCTCTTAACAGAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PNLCMARRSSGD*WRQLLPLNRAV Trigger: CACTGCTCTGTTAAGAGGGAGCAGCTGTCTCCAGCAGTCTCCTGAGGATCTGCGTGCCATGCAGAGGTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496746.5 |
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| CDS GCA 72 bp | CCACACCTCCTTGTGCACCATGTCCTTCCCATGGGATaGGATGGAGCTGCCATAGGCCATAGCCACATTGGC | + |
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Preference number: 6 (lower is better) Translates to: PHLLVHHVLPMG*DGAAIGHSHIG Trigger: GCCAATGTGGCTATGGCCTATGGCAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534374.1 |
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| CDS CCA 72 bp | GCCATAGCCACATTGGCCATTGGGTCCCCAAGCAAGTaGTTGACACTGAAGGCCACGTCTGCTCCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AIATLAIGSPSK*LTLKATSAPVA Trigger: AGCCACAGGAGCAGACGTGGCCTTCAGTGTCAACCACTTGCTTGGGGACCCAATGGCCAATGTGGCTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000431556.6 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS CCA 72 bp | CAAAGAGCGCACCTGGAAGAAAGGAGAACTGAAGCCTaGCCAGGAGGGGGAGGTTTGCCCTCAAGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QRAHLEERRTEA*PGGGGLPSSEG Trigger: GCCTTCACTTGAGGGCAAACCTCCCCCTCCTGGCCAGGCTTCAGTTCTCCTTTCTTCCAGGTGCGCTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471387.6 ENST00000485820.1 |
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| CDS TCA 72 bp | AAAGAGCGCACTCACAATGAAGTACATGAGCGCCGATaGGGTCCAGGCCAGCGCCACGTAGTAGCCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: KERTHNEVHERR*GPGQRHVVAIA Trigger: AGCGATGGCTACTACGTGGCGCTGGCCTGGACCTCATCGGCGCTCATGTACTTCATTGTGAGTGCGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526497.5 |
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| CDS GCA 72 bp | CAGCACCTCCGGGGAGAACCTTTTCTGAATGCCCAGTaGCATCCCAGCCAGGAGCACGTAAGTAATGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QHLRGEPFLNAQ*HPSQEHVSNEG Trigger: GCCTTCATTACTTACGTGCTCCTGGCTGGGATGGCACTGGGCATTCAGAAAAGGTTCTCCCCGGAGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376901.9 ENST00000471387.6 ENST00000526497.5 |
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| CDS GCA 72 bp | CCAGTTCTCCTTGTGCACCATGTCCTTCCCATGGGATaGGATGGAGCTGCCATAGGCCATAGCCACATTGGC | + |
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Preference number: 6 (lower is better) Translates to: PVLLVHHVLPMG*DGAAIGHSHIG Trigger: GCCAATGTGGCTATGGCCTATGGCAGCTCCATCGCATCCCATGGGAAGGACATGGTGCACAAGGAGAACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474986.2 |
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| CDS CCA 72 bp | GATGGAGCTGCCATAGGCCATAGCCACATTGGCCATTaGGTCCCCAAGCAAGTGGTTGACACTGAAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DGAAIGHSHIGH*VPKQVVDTEGH Trigger: GTGGCCTTCAGTGTCAACCACTTGCTTGGGGACCCAATGGCCAATGTGGCTATGGCCTATGGCAGCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000359461.10 ENST00000376899.8 ENST00000376901.9 ENST00000431556.6 ENST00000474986.2 ENST00000528575.1 ENST00000534374.1 |
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| CDS GCA 72 bp | CCTTACTGGTCACCCTGCACTGCCTGCCTGGTGTCTTaGAACTGCCACACATACACAAAGCACCAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: PYWSPCTACLVS*NCHTYTKHQEQ Trigger: CTGTTCTTGGTGCTTTGTGTATGTGTGGCAGTTGCAAGACACCAGGCAGGCAGTGCAGGGTGACCAGTAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376899.8 ENST00000474986.2 |
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