Pregenerated sensors for YEATS4 (Homo sapiens)
Ensembl gene IDs: ENSG00000127337Ensembl transcript IDs: ENST00000247843.7, ENST00000548020.5, ENST00000549685.5, ENST00000552949.1, ENST00000552955.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTaGAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: PLRNITAFAVSPFLQ*SPPYFQFSLLPSSH Trigger: ATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| 3UTR TCA 90 bp | GTACAAATTCCTATTGCTAAGAAATTCATGGTCAACAGCTGTATATaGAGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATT | + |
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Preference number: 1 (lower is better) Translates to: VQIPIAKKFMVNSCI*SSSKKHHSICSKSI Trigger: AATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAGGAATTTGTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| 3UTR TCA 72 bp | AACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTaGAGCCCACCTTATTTTCAGTTTAGCTTACTACCA | + |
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Preference number: 3 (lower is better) Translates to: NITAFAVSPFLQ*SPPYFQFSLLP Trigger: TGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | TTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTCTCATGGGCCGACTGTGCTCCTaGAGGCCATTCAGGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: FSSEAHLIFSLAYYQVLMGRLCS*RPFRPA Trigger: CGCGGGCCTGAATGGCCTTCAGGAGCACAGTCGGCC...CATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | GTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTGGCCGACTGTGCTCCTaGAGGCCATTCAGGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: VHFSSEAHLIFSLAYYQVGRLCS*RPFRPA Trigger: CGCGGGCCTGAATGGCCTTCAGGAGCACAGTCGGCC...AACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CCA 90 bp | AGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGTCAGGCCCGCGCAGGTaGAGAACGCCGCGAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSSKKHHSICSKSISPVKSGPRR*RTPRKE Trigger: CTCTTTTCGCGGCGTTCTCCACCTGCGCGGGCCTGA...CTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCATTGGGCTCACGGCGGTaGGTAACCGTCAACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: HHSICSKSISPVKPTLFSLGSRR*VTVNSS Trigger: TGAGGAGTTGACGGTTACTCACCGCCGTGAGCCCAA...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | AGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGTTGGGCTCACGGCGGTaGGTAACCGTCAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKKHHSICSKSISPVKLGSRR*VTVNSS Trigger: TGAGGAGTTGACGGTTACTCACCGCCGTGAGCCCAA...CTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CCA 90 bp | CTATTGCTAAGAAATTCATGGTCAACAGCTGTATATGAAGTTCCTCTAAGAAACTCAGGCCCGCGCAGGTaGAGAACGCCGCGAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNSWSTAVYEVPLRNSGPRR*RTPRKE Trigger: CTCTTTTCGCGGCGTTCTCCACCTGCGCGGGCCTGA...GTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | AGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGATTCGGCCATTCTCTTaGACATATTGTCCCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKKHHSICSKSISPVKIRPFS*TYCPTE Trigger: TTCCGTGGGACAATATGTTCAAGAGAATGGCCGAAT...CTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | TCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCGCTCCTAATGTTAGCTaGCGAGATGTTGTCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKKHHSICSKSISPVKPTAPNVS*RDVVNN Trigger: ATTATTGACAACATCTCGTCAGCTAACATTAGGAGC...GGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CCA 90 bp | GTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTTCCCCAGCATTGCATTaGTGTCTGATTGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHFSSEAHLIFSLAYYQVSPALH*CLIETA Trigger: AGCTGTTTCAATCAGACACCAATGCAATGCTGGGGA...AACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | TCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCGTCAACAGCTGTATATaGAGTTCCTCTAAGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SKKHHSICSKSISPVKPTVNSCI*SSSKKH Trigger: ATGTTTCTTAGAGGAACTTCATATACAGCTGTTGAC...GGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | TCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCGTTGTCAATAATTGTTaGATCATTGCTGTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKKHHSICSKSISPVKPTVVNNC*IIAVGS Trigger: AGACCCAACAGCAATGATGCAACAATTATTGACAAC...GGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CCA 90 bp | TATGAAGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTCCCCAGCATTGCATTaGTGTCTGATTGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YEVPLRNITAFAVSPFLQSPALH*CLIETA Trigger: AGCTGTTTCAATCAGACACCAATGCAATGCTGGGGA...CTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTGTCAATAATTGTTaGATCATTGCTGTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHSICSKSISPVKPTLFSVVNNC*IIAVGS Trigger: AGACCCAACAGCAATGATGCAACAATTATTGACAAC...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAAAACATCACAGCATTTaGAGTAAGTCCATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHSICSKSISPVKPTLFSKHHSI*SKSISP Trigger: TGGAGAAATGGACTTACTGCAAATGCTGTGATGTTT...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | TATGAAGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGAACAGCTTTAGCAAATaGTACAGGGTTACAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YEVPLRNITAFAVSPFLQNSFSK*YRVTGL Trigger: AAGACCTGTAACCCTGTATCATTTGCTAAAGCTGTT...CTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000247843.7 |
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| CDS-3UTR GCA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCATTTCACTTCAAGCTCTaGAAATTCTGTTTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHSICSKSISPVKPTLFSFHFKL*KFCFML Trigger: AAGCATGAAACAGAATTTGCAGAGCTTGAAGTGAAA...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | GTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTTCTCTCCTTAAGCTCTaGAATCTCAAAGCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHFSSEAHLIFSLAYYQVSLLKL*NLKACF Trigger: AAAACAAGCTTTGAGATTGCAGAGCTTAAGGAGAGA...AACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | AGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGAAACATCACAGCATTTaGAGTAAGTCCATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKKHHSICSKSISPVKKHHSI*SKSISP Trigger: TGGAGAAATGGACTTACTGCAAATGCTGTGATGTTT...CTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR GCA 90 bp | GTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTTTTCACTTCAAGCTCTaGAAATTCTGTTTCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: VHFSSEAHLIFSLAYYQVFHFKL*KFCFML Trigger: AAGCATGAAACAGAATTTGCAGAGCTTGAAGTGAAA...AACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | CTATTGCTAAGAAATTCATGGTCAACAGCTGTATATGAAGTTCCTCTAAGAAACGCTCCTAATGTTAGCTaGCGAGATGTTGTCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRNSWSTAVYEVPLRNAPNVS*RDVVNN Trigger: ATTATTGACAACATCTCGTCAGCTAACATTAGGAGC...GTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR TCA 90 bp | CTATTGCTAAGAAATTCATGGTCAACAGCTGTATATGAAGTTCCTCTAAGAAACAACAGCTTTAGCAAATaGTACAGGGTTACCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: LLLRNSWSTAVYEVPLRNNSFSK*YRVTSF Trigger: AAATGAGGTAACCCTGTATCATTTGCTAAAGCTGTT...GTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548020.5 |
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| CDS CCA 90 bp | CCTCAGGCCGACTGTGCTCCTGAAGGCCATTCAGGCCCGCGCAGGTaGAGAACGCCGCGAAAAGAGGGGCGACGGCCGCACCGCGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: PQADCAPEGHSGPRR*RTPRKEGRRPHRAQ Trigger: CTGCGCGCGGTGCGGCCGTCGCCCCTCTTTTCGCGGCGTTCTCCACCTGCGCGGGCCTGAATGGCCTTCAGGAGCACAGTCGGCCTGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548020.5 |
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| CDS TCA 90 bp | CCTTTACTCTCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTTaGACATATTGTCCCACGGAAGAAGCCGCCGCCGCCAGGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: PLLSRRSQAQIRPFS*TYCPTEEAAAARER Trigger: TCTTTCCCTGGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAGAGTAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS TCA 90 bp | GGTTTAACGATAGTAACACCCTGTAATTCCAGCTATTCAGGAGGCTaGGGCAGGAGAATCGCTTGGAGGCAGGAGAATCGCTTGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: GLTIVTPCNSSYSGG*GRRIAWRQENRLNP Trigger: TGGATTCAAGCGATTCTCCTGCCTCCAAGCGATTCTCCTGCCTCAGCCTCCTGAATAGCTGGAATTACAGGGTGTTACTATCGTTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549685.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTAATTCTCTTGAACATATaGTCCCACGGAAGAAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KKHHSICSKSISPVKPTLILLNI*SHGRSR Trigger: GCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAAT...TAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAAATTCGGCCATTCTCTaGAACATATTGTCCCACGGA | + |
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Preference number: 5 (lower is better) Translates to: HHSICSKSISPVKPTLFSNSAIL*NILSHG Trigger: TCCGTGGGACAATATGTTCAAGAGAATGGCCGAATT...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | TATGAAGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGATTCTCTTGAACATATaGTCCCACGGAAGAAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: YEVPLRNITAFAVSPFLQILLNI*SHGRSR Trigger: GCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAAT...CTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCATCTTTTTCCCCAGCATaGCATTGGTGTCTGATTGAA | + |
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Preference number: 5 (lower is better) Translates to: HHSICSKSISPVKPTLFSSFSPA*HWCLIE Trigger: TTCAATCAGACACCAATGCAATGCTGGGGAAAAAGA...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGTTGCATCATTGCTGTaGGGTCTTGAAATATCATTT | + |
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Preference number: 5 (lower is better) Translates to: HHSICSKSISPVKPTLFSVASLL*GLEISF Trigger: AAATGATATTTCAAGACCCAACAGCAATGATGCAAC...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | CATCACAGCATTTGCAGTAAGTCCATTTCTCCAGTGAAGCCCACCTTATTTTCAGGGGCAGGTAAGAACTaGAAGAAATTAAATATACAC | + |
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Preference number: 5 (lower is better) Translates to: HHSICSKSISPVKPTLFSGAGKN*KKLNIH Trigger: GTGTATATTTAATTTCTTCAAGTTCTTACCTGCCCC...TGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000247843.7 |
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| CDS-3UTR CAA 90 bp | CTATTGCTAAGAAATTCATGGTCAACAGCTGTATATGAAGTTCCTCTAAGAAACAATTCGGCCATTCTCTaGAACATATTGTCCCACGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLRNSWSTAVYEVPLRNNSAIL*NILSHG Trigger: TCCGTGGGACAATATGTTCAAGAGAATGGCCGAATT...GTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | TTCTCCAGTGAAGCCCACCTTATTTTCAGTTTAGCTTACTACCAAGTTCTCATGTTAGCTGACGAGATGTaGTCAATAATTGTTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: FSSEAHLIFSLAYYQVLMLADEM*SIIVAS Trigger: TGATGCAACAATTATTGACAACATCTCGTCAGCTAA...CATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS-3UTR CAA 90 bp | TATGAAGTTCCTCTAAGAAACATCACAGCATTTGCAGTAAGTCCATTTCTCCAGGTTGCATCATTGCTGTaGGGTCTTGAAATATCATTT | + |
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Preference number: 5 (lower is better) Translates to: YEVPLRNITAFAVSPFLQVASLL*GLEISF Trigger: AAATGATATTTCAAGACCCAACAGCAATGATGCAAC...CTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247843.7 ENST00000548020.5 |
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| CDS CCA 72 bp | GACTGTGCTCCTGAAGGCCATTCAGGCCCGCGCAGGTaGAGAACGCCGCGAAAAGAGGGGCGACGGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: DCAPEGHSGPRR*RTPRKEGRRPH Trigger: GTGCGGCCGTCGCCCCTCTTTTCGCGGCGTTCTCCACCTGCGCGGGCCTGAATGGCCTTCAGGAGCACAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548020.5 ENST00000549685.5 |
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| CDS CAA 90 bp | CTCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTTGAACATATaGTCCCACGGAAGAAGCCGCCGCCGCCAGGGAAAGAGACCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LPPESGPNSAILLNI*SHGRSRRRQGKRPG Trigger: CCCCGGTCTCTTTCCCTGGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS TCA 72 bp | AGCCGAAGGAGGGCGAGTTACTTGGGCTCACGGCGGTaGGTAACCGTCAACTCCTCAGGCCGACTGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRRRASYLGSRR*VTVNSSGRLCS Trigger: GGAGCACAGTCGGCCTGAGGAGTTGACGGTTACTCACCGCCGTGAGCCCAAGTAACTCGCCCTCCTTCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS TCA 72 bp | TCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTTaGACATATTGTCCCACGGAAGAAGCCGCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SRRSQAQIRPFS*TYCPTEEAAAA Trigger: GGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS CAA 72 bp | CTCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTaGAACATATTGTCCCACGGAAGAAGCCGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LPPESGPNSAIL*NILSHGRSRRR Trigger: GCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS CAA 90 bp | CCCTTTACTCTCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTaGAACATATTGTCCCACGGAAGAAGCCGCCGCCGCCAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PFTLPPESGPNSAIL*NILSHGRSRRRQGK Trigger: CTTTCCCTGGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAGAGTAAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS CAA 90 bp | GCCTTTACTCTCCCGCCGGAGTCAGGCCCAAATTCGGCCATTCTCTaGAACATATTGTCCCACGGAAGAAGCCGCCGCCGCCAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: AFTLPPESGPNSAIL*NILSHGRSRRRQGK Trigger: CTTTCCCTGGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAGAGTAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549685.5 |
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| CDS CAA 72 bp | GAGTCAGGCCCAAATTCGGCCATTCTCTTGAACATATaGTCCCACGGAAGAAGCCGCCGCCGCCAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ESGPNSAILLNI*SHGRSRRRQGK Trigger: CTTTCCCTGGCGGCGGCGGCTTCTTCCGTGGGACAATATGTTCAAGAGAATGGCCGAATTTGGGCCTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552949.1 ENST00000552955.1 |
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| CDS TCA 72 bp | CCGCTTGGGCCTCCCATAGTGCTGAGATTACAGGAATaGGCCATTTTGCCTCATTTCTATATGGTTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: PLGPPIVLRLQE*AILPHFYMVSH Trigger: ATGTGAAACCATATAGAAATGAGGCAAAATGGCTCATTCCTGTAATCTCAGCACTATGGGAGGCCCAAGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552955.1 |
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| CDS CAA 72 bp | CATAGAACTCTGAAACCACTGTCTTTTTCCCCAGCATaGCATTGGTGTCTGATTGAAACAGCTTTAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HRTLKPLSFSPA*HWCLIETALAN Trigger: ATTTGCTAAAGCTGTTTCAATCAGACACCAATGCAATGCTGGGGAAAAAGACAGTGGTTTCAGAGTTCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552955.1 |
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| CDS CAA 72 bp | CATGCTTATAGGCTCCTAATGTTAGCTGACGAGATGTaGTCAATAATTGTTGCATCATTGCTGTTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HAYRLLMLADEM*SIIVASLLLGL Trigger: AAGACCCAACAGCAATGATGCAACAATTATTGACAACATCTCGTCAGCTAACATTAGGAGCCTATAAGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000247843.7 ENST00000548020.5 ENST00000549685.5 ENST00000552955.1 |
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