Pregenerated sensors for YBX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000006047Ensembl transcript IDs: ENST00000570627.1, ENST00000571127.1, ENST00000571485.5, ENST00000571834.5, ENST00000671897.1, ENST00000672514.1, ENST00000672563.1, ENST00000672691.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCCACTTTGGTGCGCAGCTCCCAGCCCAGTTAGCGCTCTGGGCCTaGGGGCCAGGCCGCCTTTGGTTTTCCGGATCCTGCCGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: IHFGAQLPAQLALWA*GPGRLWFSGSCRAP Trigger: TGGAGCCCGGCAGGATCCGGAAAACCAAAGGCGGCCTGGCCCGCAGGCCCAGAGCGCTAACTGGGCTGGGAGCTGCGCACCAAAGTGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 90 bp | AGGGGAATCCACTTTGGTGCGCAGCTCCCAGCCCAGTTAGCGCTCTaGGCCTGCGGGCCAGGCCGCCTTTGGTTTTCCGGATCCTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RGIHFGAQLPAQLAL*ACGPGRLWFSGSCR Trigger: CCGGCAGGATCCGGAAAACCAAAGGCGGCCTGGCCCGCAGGCCCAGAGCGCTAACTGGGCTGGGAGCTGCGCACCAAAGTGGATTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 90 bp | CTCCCAGGAAGGTACGGCAGGATTTCCCACCAGGGGAATCCACTTTaGTGCGCAGCTCCCAGCCCAGTTAGCGCTCTGGGCCTGCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPGRYGRISHQGNPL*CAAPSPVSALGLRA Trigger: GGCCCGCAGGCCCAGAGCGCTAACTGGGCTGGGAGCTGCGCACCAAAGTGGATTCCCCTGGTGGGAAATCCTGCCGTACCTTCCTGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 90 bp | CAGTCAACTAGGCACTGTGTCCCGCCCGGGGGCGTGGCCGGACCCTaGGGCTTTATTCTCCACCCCAAGACCTTAGCTGAACCTGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QSTRHCVPPGGVAGP*GFILHPKTLAEPAG Trigger: GCCGGCAGGTTCAGCTAAGGTCTTGGGGTGGAGAATAAAGCCCCAGGGTCCGGCCACGCCCCCGGGCGGGACACAGTGCCTAGTTGACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 90 bp | CAGGGGTCGATGAGGTTGGGCGGGTGTCCAGTCCCACAGGCCAGCTaGGAAGACACCCATTCCACCCCCGCCCTGGGTTCCTTGGATACC | + |
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Preference number: 5 (lower is better) Translates to: QGSMRLGGCPVPQAS*EDTHSTPALGSLDT Trigger: GGTATCCAAGGAACCCAGGGCGGGGGTGGAATGGGTGTCTTCCCAGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCATCGACCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS TCA 90 bp | CAGCATCAGCTGGACATTGCAACCATGTGCCTCCGCAGGGGTCGATaGGGTTGGGCGGGTGTCCAGTCCCACAGGCCAGCTGGGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: QHQLDIATMCLRRGR*GWAGVQSHRPAGKT Trigger: TGTCTTCCCAGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATGTCCAGCTGATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS CCA 90 bp | CTCTGCTCAGAATCCACTGCCACAGCCTCTCCCGGTGCTGAGGGGTaGGGCTGCCTACTGAAGGAAAGCAGCAGCCTCTGGCTCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LCSESTATASPGAEG*GCLLKESSSLWLLP Trigger: AGGAAGGAGCCAGAGGCTGCTGCTTTCCTTCAGTAGGCAGCCCCACCCCTCAGCACCGGGAGAGGCTGTGGCAGTGGATTCTGAGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS GCA 90 bp | CAATGCAAGGGTCCCCAGTGCACCTGCTTGCCAGGCTCAGAGGTTTaGCTAGTTCTAACCCAGTCAACTAGGCACTGTGTCCCGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: QCKGPQCTCLPGSEV*LVLTQSTRHCVPPG Trigger: CCCGGGCGGGACACAGTGCCTAGTTGACTGGGTTAGAACTAGGCAAACCTCTGAGCCTGGCAAGCAGGTGCACTGGGGACCCTTGCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS GCA 90 bp | GTGATGCTGCTGCCGCTGGTGCAGGGGCCACGCTTTGAGAACCACTaGACCCAAGGACCTTCTCCCTCTGAAAACTGCCTCAGTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VMLLPLVQGPRFENH*TQGPSPSENCLSAS Trigger: GGAAGCACTGAGGCAGTTTTCAGAGGGAGAAGGTCCTTGGGTGCAGTGGTTCTCAAAGCGTGGCCCCTGCACCAGCGGCAGCAGCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000570627.1 ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 ENST00000672563.1 |
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| CDS CCA 90 bp | GCACAAGTGCGGCTAATGGTGGTTGACACAGGCACCCAAGGCGGATaGGCCGTTGTGAAGAAGAGCCAGAGAAACATGGCGGAGCGCACT | + |
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Preference number: 5 (lower is better) Translates to: AQVRLMVVDTGTQGG*AVVKKSQRNMAERT Trigger: AGTGCGCTCCGCCATGTTTCTCTGGCTCTTCTTCACAACGGCCCATCCGCCTTGGGTGCCTGTGTCAACCACCATTAGCCGCACTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS CCA 90 bp | TGCACCCAAGGACCTTCTCCCTCTGAAAACTGCCTCAGTGCTTCCTaGAGTGTTAACAGGTCCCGGTGGGTAGTAAGCGTGCCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CTQGPSPSENCLSAS*SVNRSRWVVSVPCP Trigger: TGGGCATGGCACGCTTACTACCCACCGGGACCTGTTAACACTCCAGGAAGCACTGAGGCAGTTTTCAGAGGGAGAAGGTCCTTGGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS GCA 90 bp | ATTTGTGCTGCGGTTAAAGGCTTTCAACCAGCATCAGCTGGACATTaGAACCATGTGCCTCCGCAGGGGTCGATGAGGTTGGGCGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: ICAAVKGFQPASAGH*NHVPPQGSMRLGGC Trigger: ACACCCGCCCAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATGTCCAGCTGATGCTGGTTGAAAGCCTTTAACCGCAGCACAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS GCA 90 bp | AGGGCTCGAATGAGCCACAGCTCTTTAAGGGAGTTGAGTTGTGAGTaGTGCCATAACAGGAAATCAGTTGAGGATTCCAGCCGGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RARMSHSSLRELSCE*CHNRKSVEDSSRGP Trigger: GGGCCCCCGGCTGGAATCCTCAACTGATTTCCTGTTATGGCAGCACTCACAACTCAACTCCCTTAAAGAGCTGTGGCTCATTCGAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS GCA 90 bp | CGCTTTGAGAACCACTGCACCCAAGGACCTTCTCCCTCTGAAAACTaGCTCAGTGCTTCCTGGAGTGTTAACAGGTCCCGGTGGGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: RFENHCTQGPSPSEN*LSASWSVNRSRWVV Trigger: TACTACCCACCGGGACCTGTTAACACTCCAGGAAGCACTGAGGCAGTTTTCAGAGGGAGAAGGTCCTTGGGTGCAGTGGTTCTCAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS TCA 90 bp | GCTCTAAACAGCTGCCAAACTTTATTCTCATCCTCAGCCTGGAGGTaGATCCCAGAGTCAGGACCACTCTCAACACGCGTGGGACCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ALNSCQTLFSSSAWR*IPESGPLSTRVGPR Trigger: CCTTGGTCCCACGCGTGTTGAGAGTGGTCCTGACTCTGGGATTCACCTCCAGGCTGAGGATGAGAATAAAGTTTGGCAGCTGTTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 90 bp | TCTGAAAACTGCCTCAGTGCTTCCTGGAGTGTTAACAGGTCCCGGTaGGTAGTAAGCGTGCCATGCCCAGGGGTAACATGCTCAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: SENCLSASWSVNRSR*VVSVPCPGVTCSIL Trigger: CAGAATTGAGCATGTTACCCCTGGGCATGGCACGCTTACTACCCACCGGGACCTGTTAACACTCCAGGAAGCACTGAGGCAGTTTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS TCA 90 bp | TGCTGCCATAACAGGAAATCAGTTGAGGATTCCAGCCGGGGGCCCTaGGGCACAGAGAACCCTATAATACATTCTGCCCCAAAGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: CCHNRKSVEDSSRGP*GTENPIIHSAPKAC Trigger: ACATGCCTTTGGGGCAGAATGTATTATAGGGTTCTCTGTGCCTCAGGGCCCCCGGCTGGAATCCTCAACTGATTTCCTGTTATGGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS GCA 90 bp | CAAAGCAAAAGGCAGGGACAGCCTTCAGTCGCAAAGTGGGTAGAATaGACTGTGCTTCTTACCTCAGTCCCAGTGAGAGCTCTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QSKRQGQPSVAKWVE*TVLLTSVPVRALST Trigger: GGTGGAAAGAGCTCTCACTGGGACTGAGGTAAGAAGCACAGTGCATTCTACCCACTTTGCGACTGAAGGCTGTCCCTGCCTTTTGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS TCA 90 bp | AGCCAGGTTTGCCAAGTTCCTGAATCATTAATCCTCCGCTACCCTTaGAGATGCGGAGGAGGCTTCCTCTTGTCACGAAGCACACATTTG | + |
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Preference number: 5 (lower is better) Translates to: SQVCQVPESLILRYP*RCGGGFLLSRSTHL Trigger: CAAATGTGTGCTTCGTGACAAGAGGAAGCCTCCTCCGCATCTTCAAGGGTAGCGGAGGATTAATGATTCAGGAACTTGGCAAACCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS CCA 90 bp | TATGAACTCCAAAGCAAAAGGCAGGGACAGCCTTCAGTCGCAAAGTaGGTAGAATGCACTGTGCTTCTTACCTCAGTCCCAGTGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: YELQSKRQGQPSVAK*VECTVLLTSVPVRA Trigger: AGCTCTCACTGGGACTGAGGTAAGAAGCACAGTGCATTCTACCCACTTTGCGACTGAAGGCTGTCCCTGCCTTTTGCTTTGGAGTTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS CCA 90 bp | TTCCAGTCTTCTTCCTTCTATAGTCAAGGAGGCAGAAAGTGCAGATaGGGCCAGAGGGGCAGAACAAGTTTGAGAAGGGAACAATGTGTC | + |
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Preference number: 5 (lower is better) Translates to: FQSSSFYSQGGRKCR*GQRGRTSLRREQCV Trigger: GACACATTGTTCCCTTCTCAAACTTGTTCTGCCCCTCTGGCCCCATCTGCACTTTCTGCCTCCTTGACTATAGAAGGAAGAAGACTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 72 bp | CAGTTAGCGCTCTGGGCCTGCGGGCCAGGCCGCCTTTaGTTTTCCGGATCCTGCCGGGCTCCACACTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QLALWACGPGRL*FSGSCRAPHCP Trigger: GGGGCAGTGTGGAGCCCGGCAGGATCCGGAAAACCAAAGGCGGCCTGGCCCGCAGGCCCAGAGCGCTAACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 72 bp | CACTTTGGTGCGCAGCTCCCAGCCCAGTTAGCGCTCTaGGCCTGCGGGCCAGGCCGCCTTTGGTTTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: HFGAQLPAQLAL*ACGPGRLWFSG Trigger: TCCGGAAAACCAAAGGCGGCCTGGCCCGCAGGCCCAGAGCGCTAACTGGGCTGGGAGCTGCGCACCAAAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 72 bp | ATGAGGTTGGGCGGGTGTCCAGTCCCACAGGCCAGCTaGGAAGACACCCATTCCACCCCCGCCCTGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: MRLGGCPVPQAS*EDTHSTPALGS Trigger: GGAACCCAGGGCGGGGGTGGAATGGGTGTCTTCCCAGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS CCA 72 bp | CTTCCACCCCAGGCTAGCCTTACAACCTGCCAGCGCTaGGTGCAACTGTCCCTGGCCAACACCCCCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LPPQASLTTCQR*VQLSLANTPSP Trigger: GGGGGAGGGGGTGTTGGCCAGGGACAGTTGCACCCAGCGCTGGCAGGTTGTAAGGCTAGCCTGGGGTGGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 72 bp | AGGCACTGTGTCCCGCCCGGGGGCGTGGCCGGACCCTaGGGCTTTATTCTCCACCCCAAGACCTTAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RHCVPPGGVAGP*GFILHPKTLAE Trigger: TTCAGCTAAGGTCTTGGGGTGGAGAATAAAGCCCCAGGGTCCGGCCACGCCCCCGGGCGGGACACAGTGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS TCA 72 bp | CTGGACATTGCAACCATGTGCCTCCGCAGGGGTCGATaGGGTTGGGCGGGTGTCCAGTCCCACAGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LDIATMCLRRGR*GWAGVQSHRPA Trigger: AGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATGTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS CAA 72 bp | CATTGCAACCATGTGCCTCCGCAGGGGTCGATGAGGTaGGGCGGGTGTCCAGTCCCACAGGCCAGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HCNHVPPQGSMR*GGCPVPQASWE Trigger: TTCCCAGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS CAA 90 bp | TCAGCTGGACATTGCAACCATGTGCCTCCGCAGGGGTCGATGAGGTaGGGCGGGTGTCCAGTCCCACAGGCCAGCTGGGAAGACACCCAT | + |
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Preference number: 6 (lower is better) Translates to: SAGHCNHVPPQGSMR*GGCPVPQASWEDTH Trigger: ATGGGTGTCTTCCCAGCTGGCCTGTGGGACTGGACACCCGCCCAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATGTCCAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS TCA 72 bp | TGGTTGACACAGGCACCCAAGGCGGATGGGCCGTTGTaGAGAAGAGCCAGAGAAACATGGCGGAGCGCACTG | + |
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Preference number: 6 (lower is better) Translates to: WLTQAPKADGPL*RRARETWRSAL Trigger: CAGTGCGCTCCGCCATGTTTCTCTGGCTCTTCTTCACAACGGCCCATCCGCCTTGGGTGCCTGTGTCAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS CCA 72 bp | CGGCTAATGGTGGTTGACACAGGCACCCAAGGCGGATaGGCCGTTGTGAAGAAGAGCCAGAGAAACATGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLMVVDTGTQGG*AVVKKSQRNMA Trigger: CGCCATGTTTCTCTGGCTCTTCTTCACAACGGCCCATCCGCCTTGGGTGCCTGTGTCAACCACCATTAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS CCA 72 bp | TGCCTCAGTGCTTCCTGGAGTGTTAACAGGTCCCGGTaGGTAGTAAGCGTGCCATGCCCAGGGGTAACATGC | + |
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Preference number: 6 (lower is better) Translates to: CLSASWSVNRSR*VVSVPCPGVTC Trigger: GCATGTTACCCCTGGGCATGGCACGCTTACTACCCACCGGGACCTGTTAACACTCCAGGAAGCACTGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS GCA 72 bp | GCGGTTAAAGGCTTTCAACCAGCATCAGCTGGACATTaGAACCATGTGCCTCCGCAGGGGTCGATGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AVKGFQPASAGH*NHVPPQGSMRL Trigger: CAACCTCATCGACCCCTGCGGAGGCACATGGTTGCAATGTCCAGCTGATGCTGGTTGAAAGCCTTTAACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571127.1 ENST00000571485.5 ENST00000671897.1 ENST00000672691.1 |
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| CDS GCA 72 bp | AACCACTGCACCCAAGGACCTTCTCCCTCTGAAAACTaGCTCAGTGCTTCCTGGAGTGTTAACAGGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: NHCTQGPSPSEN*LSASWSVNRSR Trigger: CCGGGACCTGTTAACACTCCAGGAAGCACTGAGGCAGTTTTCAGAGGGAGAAGGTCCTTGGGTGCAGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS GCA 72 bp | GACAGTGCCCAGGACTTGGATTGCTGGTCTGCAAAGTaGCGCCCCCAGGTCATAACTGAGGGTTTTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: DSAQDLDCWSAK*RPQVITEGFSS Trigger: GCTAGAAAAACCCTCAGTTATGACCTGGGGGCGGCACTTTGCAGACCAGCAATCCAAGTCCTGGGCACTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000571834.5 ENST00000672514.1 |
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| CDS GCA 72 bp | AGTGTTAACAGGTCCCGGTGGGTAGTAAGCGTGCCATaGCCAGGGGTAACATGCTCAATTCTGACGGACGTT | + |
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Preference number: 6 (lower is better) Translates to: SVNRSRWVVSVP*PGVTCSILTDV Trigger: AACGTCCGTCAGAATTGAGCATGTTACCCCTGGGCATGGCACGCTTACTACCCACCGGGACCTGTTAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS GCA 72 bp | AGGCAGGGACAGCCTTCAGTCGCAAAGTGGGTAGAATaGACTGTGCTTCTTACCTCAGTCCCAGTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RQGQPSVAKWVE*TVLLTSVPVRA Trigger: AGCTCTCACTGGGACTGAGGTAAGAAGCACAGTGCATTCTACCCACTTTGCGACTGAAGGCTGTCCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571485.5 ENST00000571834.5 ENST00000671897.1 ENST00000672514.1 |
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| CDS TCA 72 bp | AGCTGCCAAACTTTATTCTCATCCTCAGCCTGGAGGTaGATCCCAGAGTCAGGACCACTCTCAACACGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SCQTLFSSSAWR*IPESGPLSTRV Trigger: CACGCGTGTTGAGAGTGGTCCTGACTCTGGGATTCACCTCCAGGCTGAGGATGAGAATAAAGTTTGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CAA 90 bp | CCCAACAGGTGGAGGGCTCGAATGAGCCACAGCTCTTTAAGGGAGTaGAGTTGTGAGTGCTGCCATAACAGGAAATCAGTTGAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRWRARMSHSSLRE*SCECCHNRKSVEDS Trigger: GGAATCCTCAACTGATTTCCTGTTATGGCAGCACTCACAACTCAACTCCCTTAAAGAGCTGTGGCTCATTCGAGCCCTCCACCTGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CAA 90 bp | AGACAGGGACCCTTCCCCAGAACAAACGTTTTAGCTTTAAAGCACTaGGATCTGCACAAAGGTCAGCCTGCTAAGAGGGAACTAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RQGPFPRTNVLALKH*DLHKGQPAKRELGP Trigger: AGGCCCTAGTTCCCTCTTAGCAGGCTGACCTTTGTGCAGATCCAAGTGCTTTAAAGCTAAAACGTTTGTTCTGGGGAAGGGTCCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CCA 72 bp | TCTTCCTTCTATAGTCAAGGAGGCAGAAAGTGCAGATaGGGCCAGAGGGGCAGAACAAGTTTGAGAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSFYSQGGRKCR*GQRGRTSLRRE Trigger: TTCCCTTCTCAAACTTGTTCTGCCCCTCTGGCCCCATCTGCACTTTCTGCCTCCTTGACTATAGAAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS TCA 72 bp | GAAAGTGCAGATGGGGCCAGAGGGGCAGAACAAGTTTaGGAAGGGAACAATGTGTCAGGAACTTGCTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ESADGARGAEQV*EGNNVSGTCSK Trigger: TTTAGAGCAAGTTCCTGACACATTGTTCCCTTCTCAAACTTGTTCTGCCCCTCTGGCCCCATCTGCACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CAA 72 bp | TGGAGGGCTCGAATGAGCCACAGCTCTTTAAGGGAGTaGAGTTGTGAGTGCTGCCATAACAGGAAATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WRARMSHSSLRE*SCECCHNRKSV Trigger: AACTGATTTCCTGTTATGGCAGCACTCACAACTCAACTCCCTTAAAGAGCTGTGGCTCATTCGAGCCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS GCA 72 bp | ATGAGCCACAGCTCTTTAAGGGAGTTGAGTTGTGAGTaGTGCCATAACAGGAAATCAGTTGAGGATTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MSHSSLRELSCE*CHNRKSVEDSS Trigger: GCTGGAATCCTCAACTGATTTCCTGTTATGGCAGCACTCACAACTCAACTCCCTTAAAGAGCTGTGGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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| CDS CAA 72 bp | CCCTTCCCCAGAACAAACGTTTTAGCTTTAAAGCACTaGGATCTGCACAAAGGTCAGCCTGCTAAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PFPRTNVLALKH*DLHKGQPAKRE Trigger: TTCCCTCTTAGCAGGCTGACCTTTGTGCAGATCCAAGTGCTTTAAAGCTAAAACGTTTGTTCTGGGGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571485.5 ENST00000671897.1 |
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