RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YARS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134684

Ensembl transcript IDs: ENST00000373477.9, ENST00000466052.1, ENST00000469100.5, ENST00000470377.1, ENST00000472692.1, ENST00000481895.6, ENST00000487404.5, ENST00000490826.1, ENST00000616261.2, ENST00000674629.1, ENST00000674654.1, ENST00000675785.1, ENST00000676297.1

Found 800 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAG +
Preference number: 1 (lower is better)
Translates to: SGCTAPLPACPAVPP*ARTVPGRSPQSVVQ
Trigger: CTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 90 bp ATCTTCTGGGGTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACA +
Preference number: 1 (lower is better)
Translates to: IFWGFRLHSTTTSLS*SSSLGTNCTRPLTT
Trigger: TGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 90 bp TTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTC +
Preference number: 1 (lower is better)
Translates to: FLLGHELYQAAHHSP*FSFPHVNLLYIQAV
Trigger: GACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 90 bp GAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTaGGGTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: EAHRSMPWDSTPLIF*GFRLHSTTTSLSCS
Trigger: ACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 90 bp CTTTTCATAGCCCTTCACAAACACGTGCTCACCAGGAGCAGAGCCTaGCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTAT +
Preference number: 1 (lower is better)
Translates to: LFIALHKHVLTRSRA*RRVQRFNLAVYPFY
Trigger: ATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGGCTATGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR TCA 90 bp AGTCCAAACCCGCTGCTTCCGTGTCCTGAGAGATGGGTAAATGGGTaGTGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: SPNPLLPCPERWVNG*WMEQTEETADDSVV
Trigger: CACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCATTTACCCATCTCTCAGGACACGGAAGCAGCGGGTTTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CCA 90 bp CAGGTGCGGGAGCAGCTTCCTGGTTGTCACCAGGCACATGGGCTCTaGAGTTTGAAAGATCTGGGTACTAATAATTCCTGCTCAGTTACT +
Preference number: 1 (lower is better)
Translates to: QVREQLPGCHQAHGL*SLKDLGTNNSCSVT
Trigger: AGTAACTGAGCAGGAATTATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTCCCGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CCA 90 bp CTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCCCTTCACAAACACGTGCTCACCAGG +
Preference number: 1 (lower is better)
Translates to: LQLLEDFLLGLELLI*LALFIALHKHVLTR
Trigger: CCTGGTGAGCACGTGTTTGTGAAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR TCA 90 bp GGGCAGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATaGTCACAGCACGAACTTTTCTATTCTAGCCTGGCCTCTAGGAAG +
Preference number: 1 (lower is better)
Translates to: GQPVPEGRVCDKSQV*SQHELFYSSLASRK
Trigger: CTTCCTAGAGGCCAGGCTAGAATAGAAAAGTTCGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR GCA 90 bp GGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTGTaGGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAACTTCTC +
Preference number: 1 (lower is better)
Translates to: GNGAQLGHEVGLLPL*DALLRNFEVSLQLL
Trigger: GAGAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCC +
Preference number: 1 (lower is better)
Translates to: SDLQEMEPSLVMKLV*FHCAMHSSEILKSA
Trigger: GGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 90 bp TCTGTTTTCCCTTCCCTTTCCTTTTCAAATCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCAGC +
Preference number: 1 (lower is better)
Translates to: SVFPSLSFSNPTVSC*GEAVISLVQVPDPS
Trigger: GCTGGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGAAAAGGAAAGGGAAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR GCA 90 bp AGGGGTATTAAACTTTTCCCGGATTGGATCCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTTCAGGTCTCCAGGATGTACAACCTC +
Preference number: 1 (lower is better)
Translates to: RGIKLFPDWIQQLVQ*DFNRILQVSRMYNL
Trigger: GAGGTTGTACATCCTGGAGACCTGAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTTAATACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR TCA 90 bp CCAAGTGCAGGGAGGTACTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAATACTCTTCA +
Preference number: 1 (lower is better)
Translates to: PSAGRYFSAKVKIFL*SMPPNWASTFKYSS
Trigger: TGAAGAGTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGTACCTCCCTGCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
3UTR CCA 90 bp GCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATaGACAATTAAATTACATCCCAACATCATTCATACTTTAATATAT +
Preference number: 1 (lower is better)
Translates to: AHSSIPSEPSLVTNI*TIKLHPNIIHTLIY
Trigger: ATATATTAAAGTATGAATGATGTTGGGATGTAATTTAATTGTCCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 2 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCCCACATCTGAGACGATaGGCAGCCGGGCAGAGACGC +
Preference number: 2 (lower is better)
Translates to: CTRPLTTVRGSASPTSIFPHLRR*AAGQRR
Trigger: GCGTCTCTGCCCGGCTGCCCATCGTCTCAGATGTGG...GAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676297.1
3UTR CAA 90 bp TTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: FRLHSTTTSLSCSSS*GTNCTRPLTTVRGS
Trigger: TGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCCTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp GCAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: AVPPWARTVPGRSPQSVVALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...AACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: GAEPAGGSRGSTWRFIPSALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...AGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp ACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 2 (lower is better)
Translates to: TRAHQEQSLPEGPEVQPGLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...GCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 90 bp AGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SMPWDSTPLIFWGFR*HSTTTSLSCSSSLG
Trigger: GCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 2 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 90 bp CGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATTGGCTTCTGCTTTGAGGGATCTGGG +
Preference number: 2 (lower is better)
Translates to: RISSRDGMTSSGSEF*AGPLAIGFCFEGSG
Trigger: CCCAGATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 2 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACGAATCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: QVAQHHYQPVLQFLLGHESWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...TTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 2 (lower is better)
Translates to: GAEPAGGSRGSTWRFIPSLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...AGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TCACAAACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: SQTRAHQEQSLPEGPEVQQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...TTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp CTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LYQAAHHSPWFSFPHVNLLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...AAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 2 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGGCGGGAGCAGCTTCCTaGTTGTCACCAGGCACATGG +
Preference number: 2 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQAGAAS*LSPGTW
Trigger: CCATGTGCCTGGTGACAACCAGGAAGCTGCTCCCGC...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR TCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCTAACAACACGCAGCTaGTTTAGGGAGTGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWLTTRS*FRECPS
Trigger: GCTGGGACACTCCCTAAATCAGCTGCGTGTTGTTAG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTCAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp TGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGTTTTTGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 2 (lower is better)
Translates to: WPLASALRDLGRQRWPVFVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...AAAAACTGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPELGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp AGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGGGTTTCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: RSTQKHALGLDSSHLLGFHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...AAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp ACCTCTGCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATGGCTGAGGTGGGAGAACTaGTTGAGCCCAGGCTGTCGA +
Preference number: 2 (lower is better)
Translates to: TSAHSSIPSEPSLVTNIWLRWEN*LSPGCR
Trigger: TCGACAGCCTGGGCTCAAGCAGTTCTCCCACCTCAG...CCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp ACCTCTGCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATGGACTACCCGGGTGTTGTaGCATGCACCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: TSAHSSIPSEPSLVTNIWTTRVL*HAPVVP
Trigger: TGGGACCACAGGTGCATGCCACAACACCCGGGTAGT...CCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR TCA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 2 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GTTGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VGLLPLCDALLRNFEVSLHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...CAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKARVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: DALWRSTPPSMKTESLSAPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKAPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: SIEAHRSMPWDSTPLIFWPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...CCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 2 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 2 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp AAGTCAGCCTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: KSACNFSKTFFLGLSSSSRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CCCACACGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 2 (lower is better)
Translates to: PTRISSRDGMTSSGSEFLRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...CAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AGAGAATCAGGGCAGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTAGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: RESGQPVPEGRVCDKSQVVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...TACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCTGCCCTGATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CCCTTTCAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 2 (lower is better)
Translates to: PFQRFTGNGAQLGHEVGLHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...CAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp GTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAACTTGGCCCAGGGGTTTaGGACCTGCCTGGGCAACAC +
Preference number: 2 (lower is better)
Translates to: VLFPPHFSSRRITNSIRKLGPGV*DLPGQH
Trigger: GTGTTGCCCAGGCAGGTCTCAAACCCCTGGGCCAAG...TTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp GTCTGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 2 (lower is better)
Translates to: VCIWVLLHSDDFPHTDIQRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...CTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 2 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGAAGTAAATCCAACAGGTaGGGGAGCAGCTTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGSKSNR*GSSFLV
Trigger: AACCAGGAAGCTGCTCCCGCACCTGTTGGATTTACT...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TTTTCCCGGATTGGATCCAGCAACTTGTTCAGTGCGACTTCAACAGAATTCTTCCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 2 (lower is better)
Translates to: FSRIGSSNLFSATSTEFFPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...GAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674629.1
3UTR-3UTR CCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: RVSCPLPSSAPNKESKPANSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAACTTCTCAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 2 (lower is better)
Translates to: LPLCDALLRNFEVSLQLLRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...GAGAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 2 (lower is better)
Translates to: FIPSIEAHRSMPWDSTPLRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...GAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 2 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCAGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTGTCACCAGGCACATaGGCTCTGGAGTTTGAAAGA +
Preference number: 2 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKALSPGT*ALEFER
Trigger: TCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAA...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR CCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGCCTCTCCTTGGAAACTaGGCTATTAGGAAAGGAGTA +
Preference number: 2 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQPLLGN*AIRKGV
Trigger: TACTCCTTTCCTAATAGCCCAGTTTCCAAGGAGAGG...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CAA 90 bp CAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: QRFTGNGAQLGHEVG*LPLCDALLRNFEVS
Trigger: GCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGATGGGCTCTGGAGTTTaGAAGATCTGGGTACTAATA +
Preference number: 2 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWMGSGV*KIWVLI
Trigger: TATTAGTACCCAGATCTTTCAAACTCCAGAGCCCAT...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR TCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCCCTAGCCCACATGCATaGCTATTTGTAGTTTTTGCC +
Preference number: 2 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPPSPHA*LFVVFA
Trigger: GGCAAAAACTACAAATAGTCATGCATGTGGGCTAGG...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 2 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPETSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 2 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCATACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACAAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTAAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 2 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CAA 90 bp CCTTTCAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAG +
Preference number: 2 (lower is better)
Translates to: PFSDLQEMEPSLVMK*VCFHCAMHSSEILK
Trigger: CTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCAACAGTGATGGGGATTTaGCTGAGATGCCTTATGGAG +
Preference number: 2 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSTVMGI*LRCLME
Trigger: CTCCATAAGGCATCTCAGTCAAATCCCCATCACTGT...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373477.9
ENST00000676297.1
3UTR-3UTR TCA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGACCTAGCCCACATGCATaGCTATTTGTAGTTTTTGCC +
Preference number: 2 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGPSPHA*LFVVFA
Trigger: GGCAAAAACTACAAATAGTCATGCATGTGGGCTAGG...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp AGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: RTEPHCSPHFLAHRRPSSKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...TGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TTTTCCCGGATTGGATCCAGCAACTTGTTCAGTGCGACTTCAACAGAATTCTTCTCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 2 (lower is better)
Translates to: FSRIGSSNLFSATSTEFFSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...GAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674629.1
3UTR-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATACTGGTCTCAAACTTCTaGGCTCAAGCAACTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LHILLPIKEINLGLLEVILVSNF*AQATLL
Trigger: CAGGAGAGTTGCTTGAGCCCAGAAGTTTGAGACCAG...TATGACTTCTAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR CCA 90 bp TCAGCCTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTGGTAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: SACNFSKTFFLGLSSSSGKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...ACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAACTTCTCTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTATA +
Preference number: 2 (lower is better)
Translates to: LPLCDALLRNFEVSLQLLSRGST*RFIPSI
Trigger: TATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGA...GAGAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 90 bp AGCATCTCAGCTGCTTCAGGGGAAGGCTTGTGGCTTATATCTATTTaGTTGTATTCCTCTAGTTCAACATGTCTGCCCCCACCCTTACTT +
Preference number: 2 (lower is better)
Translates to: SISAASGEGLWLISI*LYSSSSTCLPPPLL
Trigger: AAGTAAGGGTGGGGGCAGACATGTTGAACTAGAGGAATACAACAAAATAGATATAAGCCACAAGCCTTCCCCTGAAGCAGCTGAGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 2 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKASFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCACAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp ATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATGCACTCCTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 2 (lower is better)
Translates to: MEPSLVMKLVCFHCAMHSSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...GGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 2 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR TCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 2 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGACAAGGAGATCAATCTTaGACTCCTAGAAGTCATAGA +
Preference number: 2 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGQGDQS*TPRSHR
Trigger: TCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTG...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTGGTACTAATAATTCCTaGTCAGTTACTAACTGTGTG +
Preference number: 2 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVGTNNS*SVTNCV
Trigger: CACACAGTTAGTAACTGAGCAGGAATTATTAGTACC...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCATCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 2 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 2 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR GCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGAGAAAAAGAAAAAGATaGTGGGAAATGCGAACCAAA +
Preference number: 2 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTRKRKR*WEMRTK
Trigger: TTTGGTTCGCATTTCCCAGCATCTTTTTCTTTTTCT...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAAGGAATGTGTCACCATaGCCAGGTAATTCTATTTTT +
Preference number: 2 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQRNVSP*PGNSIF
Trigger: AAAAATAGAATTACCTGGGCATGGTGACACATTCCT...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR GCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CCA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 3 (lower is better)
Translates to: TRAHQEQSLPEGPEVQPGRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...GCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp ACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGCCGCTCACCACAGTCC +
Preference number: 3 (lower is better)
Translates to: TAPLPACPAVPP*ARTVPGRSPQS
Trigger: GGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 3 (lower is better)
Translates to: VPPWARTVPGRSPQSVVQRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...CTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 72 bp GGTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACGAACTGTACCAGGCCG +
Preference number: 3 (lower is better)
Translates to: GFRLHSTTTSLS*SSSLGTNCTRP
Trigger: CGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: VPPWARTVPGRSPQSVVQPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...CTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: TRAHQEQSLPEGPEVQPGSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...GCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGACAGTGATGGGGATTaGACTGAGATGCCTTATGGA +
Preference number: 3 (lower is better)
Translates to: TRAHQEQSLPEGPEVQPGDSDGD*TEMPYG
Trigger: TCCATAAGGCATCTCAGTCAAATCCCCATCACTGTC...GCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
3UTR-3UTR CAA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWSDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp TGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCCCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: CTRPLTTVRGSASPTSIFPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...GAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATGAGCTCCTCATCTGGTaGGCCCTTTTCATAGCCCTT +
Preference number: 3 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYELLIW*ALFIAL
Trigger: AAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTC...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 3 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAAGGTGGGAGAACTGCTaGAGCCCAGGCTGTCGAGGC +
Preference number: 3 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPRWENC*SPGCRG
Trigger: GCCTCGACAGCCTGGGCTCAAGCAGTTCTCCCACCT...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CCA 72 bp GGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTCAATCTTCTCTACATA +
Preference number: 3 (lower is better)
Translates to: GHELYQAAHHSP*FSFPHVNLLYI
Trigger: TATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTATAGAAGCACACAGAAGC +
Preference number: 3 (lower is better)
Translates to: GAEPAGGSRGST*RFIPSIEAHRS
Trigger: GCTTCTGTGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GCAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: AVPPWARTVPGRSPQSVVQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...AACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp AGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTaGGGTTTCAGGTTGCACAGCACCACTACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: RSMPWDSTPLIF*GFRLHSTTTSL
Trigger: CAGGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GCAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: AVPPWARTVPGRSPQSVVSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...AACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCATCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: VSGCTAPLPACPAVPPWASDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...TGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 3 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSIRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 3 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATGCACTCCTTCTTGGCAGGGCCTTaGGCCATTGGCTTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: MEPSLVMKLVCFHCAMHSFLAGP*AIGFCF
Trigger: AAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAA...GGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp TCCAGGTACCAGATCCCAGCTAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCTGGGCACCAGTATTTT +
Preference number: 3 (lower is better)
Translates to: SRYQIPARGAAA*ITPRKPGHQYF
Trigger: AAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCTAGCTGGGATCTGGTACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CCA 72 bp AAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTaGTTGTCACCAGGCACATGGGCTCTGGAGTTTGAA +
Preference number: 3 (lower is better)
Translates to: KGVNPTGAGAAS*LSPGTWALEFE
Trigger: TTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR CAA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCGGAGCAGCTTCCTGGTaGTCACCAGGCACATGGGCT +
Preference number: 3 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISGAASW*SPGTWA
Trigger: AGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTCC...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR CAA 90 bp TTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 3 (lower is better)
Translates to: FQVAQHHYQPVLQFLLGHSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...GTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACATCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTSDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 3 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 3 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 3 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR TCA 72 bp TCAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACTGTGCGATGCACTCCT +
Preference number: 3 (lower is better)
Translates to: SAIYRKWSPAWS*SWFASTVRCTP
Trigger: AGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 72 bp TTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCACAGTGATGATTTTCCC +
Preference number: 3 (lower is better)
Translates to: FPHVNLLYIQAV*IWVLLHSDDFP
Trigger: GGGAAAATCATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp GAGCAGCTTCCTGGTTGTCACCAGGCACATGGGCTCTaGAGTTTGAAAGATCTGGGTACTAATAATTCCTGC +
Preference number: 3 (lower is better)
Translates to: EQLPGCHQAHGL*SLKDLGTNNSC
Trigger: GCAGGAATTATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CCA 72 bp CTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCCCTTCACAAACACGTG +
Preference number: 3 (lower is better)
Translates to: LEDFLLGLELLI*LALFIALHKHV
Trigger: CACGTGTTTGTGAAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCGCTGTGGCCCAGCCCTaGTTAGGGGTTGGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGAVAQP*LGVGLS
Trigger: TGAGAGACCAACCCCTAACAAGGGCTGGGCCACAGC...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GTCTGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 3 (lower is better)
Translates to: VCIWVLLHSDDFPHTDIQSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...CTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR GCA 72 bp GTGCCAAGCCTCAGAGTAAGCAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCACTAGGTTCTCTGTTT +
Preference number: 3 (lower is better)
Translates to: VPSLRVSRHWES*QPLGRPLGSLF
Trigger: AAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTGAGGCTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR GCA 72 bp CAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCACTCCTCAGAAATTTTG +
Preference number: 3 (lower is better)
Translates to: QEMEPSLVMKLV*FHCAMHSSEIL
Trigger: CAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTaGGACTCGACTCCTCTCATCTTCTGGGGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: FIPSIEAHRSMP*DSTPLIFWGFR
Trigger: CCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 3 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp CCCTTTCAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 3 (lower is better)
Translates to: PFQRFTGNGAQLGHEVGLSKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...CAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCCACTCCTCAGAAATTTaGAAGTCAGCCTGCAACTTC +
Preference number: 3 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPHSSEI*KSACNF
Trigger: GAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTG...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp CCTTCCCTTTCCTTTTCAAATCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCA +
Preference number: 3 (lower is better)
Translates to: PSLSFSNPTVSC*GEAVISLVQVP
Trigger: TGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGAAAAGGAAAGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CCA 72 bp TCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTaGACTCCTAGAAGTCATAGAACGGAAGAGGACCTC +
Preference number: 3 (lower is better)
Translates to: SSHPPSDQGDQS*TPRSHRTEEDL
Trigger: GAGGTCCTCTTCCGTTCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR-3UTR CAA 90 bp CTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAACTTCTCATGTCAACAAACTCATaGACAGCATTCCTAGCTCAC +
Preference number: 3 (lower is better)
Translates to: LPLCDALLRNFEVSLQLLMSTNS*TAFLAH
Trigger: GTGAGCTAGGAATGCTGTCAATGAGTTTGTTGACAT...GAGAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp CGTAGGATCACAAACTCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 3 (lower is better)
Translates to: RRITNSDLRGKRTCLMKDSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...GTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGAGTTTGTGATCCTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616261.2
ENST00000674629.1
3UTR TCA 72 bp TTCCTGGTTGTCACCAGGCACATGGGCTCTGGAGTTTaGAAGATCTGGGTACTAATAATTCCTGCTCAGTTA +
Preference number: 3 (lower is better)
Translates to: FLVVTRHMGSGV*KIWVLIIPAQL
Trigger: TAACTGAGCAGGAATTATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR TCA 72 bp GTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATaGTCACAGCACGAACTTTTCTATTCTAGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: VPEGRVCDKSQV*SQHELFYSSLA
Trigger: GGCCAGGCTAGAATAGAAAAGTTCGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR GCA 72 bp AAACTTTTCCCGGATTGGATCCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTTCAGGTCTCCAGGATG +
Preference number: 3 (lower is better)
Translates to: KLFPDWIQQLVQ*DFNRILQVSRM
Trigger: CATCCTGGAGACCTGAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CCA 72 bp AAGTATGATCACAGCACGAACTTTTCTATTCTAGCCTaGCCTCTAGGAAGAAAACAGAGAGTGTTACCGGAC +
Preference number: 3 (lower is better)
Translates to: KYDHSTNFSILA*PLGRKQRVLPD
Trigger: GTCCGGTAACACTCTCTGTTTTCTTCCTAGAGGCCAGGCTAGAATAGAAAAGTTCGTGCTGTGATCATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR-3UTR CAA 90 bp AAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCATGGGCTCTGGAGTTaGAAAGATCTGGGTACTAAT +
Preference number: 3 (lower is better)
Translates to: KLCRFCFHPISHLVGSQTHGLWS*KDLGTN
Trigger: ATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATG...AGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR TCA 72 bp GGGAGGTACTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GRYFSAKVKIFL*SMPPNWASTFK
Trigger: TTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGTACCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
3UTR GCA 72 bp CTCTGGAGTTTGAAAGATCTGGGTACTAATAATTCCTaGTCAGTTACTAACTGTGTGATATTGGACAACTTC +
Preference number: 3 (lower is better)
Translates to: LWSLKDLGTNNS*SVTNCVILDNF
Trigger: GAAGTTGTCCAATATCACACAGTTAGTAACTGAGCAGGAATTATTAGTACCCAGATCTTTCAAACTCCAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CCA 72 bp AGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATaGACAATTAAATTACATCCCAACATCATTCATACT +
Preference number: 3 (lower is better)
Translates to: SIPSEPSLVTNI*TIKLHPNIIHT
Trigger: AGTATGAATGATGTTGGGATGTAATTTAATTGTCCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGGGCCTTTGTGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSRDGMTSSGSEFLAGPLWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...CAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: PLPSSAPNKESKPAASVSTRAPS*VTVAAA
Trigger: CGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGT...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ACRRVQRFNLAVYPFYRSTRAPS*VTVAAA
Trigger: CGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGT...GCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGTRAPS*VTVAAA
Trigger: CGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGT...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AVPPWARTVPGRSPQSVVWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...AACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTACTTCCCAGATGGGGTaGCAGCCAGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPTSQMG*QPGRGC
Trigger: GCAGCCTCTGCCTGGCTGCCACCCCATCTGGGAAGT...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR GCA 90 bp CCCACACGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGACCGTCGCCGCCGCGTaGCGGGAACTGTCACGCGAG +
Preference number: 4 (lower is better)
Translates to: PTRISSRDGMTSSGSEFLTVAAA*RELSRE
Trigger: CTCGCGTGACAGTTCCCGGCACGCGGCGGCGACGGT...CAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCGTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VPPWARTVPGRSPQSVVQLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...CTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FQVAQHHYQPVLQFLLGHWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...GTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTAAATACTCTTCATCCAAAGCCTCCCAGACGGGGTGGCGGTCGGGCAGAGACCCTCACTTCCAAGACTaGGCGGCCGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FKYSSSKASQTGWRSGRDPHFQD*AAGQRG
Trigger: GCCCCTCTGCCCGGCCGCCCAGTCTTGGAAGTGAGG...GTCTCTGCCCGACCGCCACCCCGTCTGGGAGGCTTTGGATGAAGAGTATTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676297.1
3UTR CAA 72 bp CACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGGCCGCTCACCACAGTC +
Preference number: 4 (lower is better)
Translates to: HSTTTSLSCSSS*GTNCTRPLTTV
Trigger: GACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCACAAACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SQTRAHQEQSLPEGPEVQLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...TTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TRAHQEQSLPEGPEVQPGPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...GCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCCCAGGTTGCATCAGCTaGGCTCGGCGCTCCGCTTAC +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPPGCIS*ARRSAY
Trigger: GTAAGCGGAGCGCCGAGCCCAGCTGATGCAACCTGG...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675785.1
CDS-3UTR TCA 90 bp GGCCTTTGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: GLWPLASALRDLGRQRWPAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...TGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCACCGTCGCCGCCGCGTaGCGGGAACTGTCACGCGAG +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPTVAAA*RELSRE
Trigger: CTCGCGTGACAGTTCCCGGCACGCGGCGGCGACGGT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCCAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAACTTCTCACCGTCGCCGCCGCGTaGCGGGAACTGTCACGCGAG +
Preference number: 4 (lower is better)
Translates to: LPLCDALLRNFEVSLQLLTVAAA*RELSRE
Trigger: CTCGCGTGACAGTTCCCGGCACGCGGCGGCGACGGT...GAGAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCAAGCCACATGTGGTTTaGCCGTGGTTGCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLPSSAPNKESKPAASVSKPHVV*PWLPFP
Trigger: GGGGAACGGCAACCACGGGCAAACCACATGTGGCTT...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: FQVAQHHYQPVLQFLLGHTTSLS*SSSLGT
Trigger: CGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGT...GTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCAGTTCCTCCTTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AVPPWARTVPGRSPQSVVPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...AACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAAGGAGGAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVTRAPS*VTVAAA
Trigger: CGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCAAAGTAAGCCACATGTaGTTTGCCCGTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPKVSHM*FARGCR
Trigger: ACGGCAACCACGGGCAAACCACATGTGGCTTACTTT...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGATGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGWNRAV*PRRRVC
Trigger: ACAGACTCTCCTCCGTGGTCACACAGCACGATTCCA...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGGGCCTTTGGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: SSRDGMTSSGSEFLAGPLAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...CAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGAACCGTCGCCGCCGCGTaGCGGGAACTGTCACGCGAG +
Preference number: 4 (lower is better)
Translates to: DSSSEELILLPVNPGTIGTVAAA*RELSRE
Trigger: CTCGCGTGACAGTTCCCGGCACGCGGCGGCGACGGT...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELIWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACTGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTATGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTCTGTCTGCATCTGGGTaGTTCTCCACAGTGATGATT +
Preference number: 4 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPLSASG*FSTVMI
Trigger: AATCATCACTGTGGAGAAGCACCCAGATGCAGACAG...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGTTTTTACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: WPLASALRDLGRQRWPVFTTSLS*SSSLGT
Trigger: CGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGT...AAAAACTGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGATCTGGGGTTTCAGGTTaGACAGCACCACTACCAGCC +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGSGVSG*TAPLPA
Trigger: GGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGA...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWVMKLV*FHCAMH
Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTAACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVTRAPS*VTVAAA
Trigger: CGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGT...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACAGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCAGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSGCTAPLPACPAVPPWADIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...TGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWPAVPP*ARTVPG
Trigger: GCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSPAVPP*ARTVPG
Trigger: GCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGG...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CAA 72 bp TGGGACTCGACTCCTCTCATCTTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGCCTGTCCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: WDSTPLIFWGFR*HSTTTSLSCSS
Trigger: GGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAWNRAV*PRRRVC
Trigger: ACAGACTCTCCTCCGTGGTCACACAGCACGATTCCA...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACGAAAGCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: QVAQHHYQPVLQFLLGHESPAWS*SWFAST
Trigger: AGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCT...TTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGACTAACAACACGCAGCTaGTTTAGGGAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGLTTRS*FRECPS
Trigger: GCTGGGACACTCCCTAAATCAGCTGCGTGTTGTTAG...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTTGGCCCAGGGGTTTaGGACCTGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSLGPGV*DLPGQH
Trigger: GTGTTGCCCAGGCAGGTCTCAAACCCCTGGGCCAAG...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAATGGCTCCGCTACCCCTaGTTCCCCCGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQWLRYP*FPRSAR
Trigger: CCGGGCTGAGCGGGGGAAGCAGGGGTAGCGGAGCCA...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGTTTTTCCCTTCACAAACACGTaGTCACCAGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: WPLASALRDLGRQRWPVFPFTNT*SPGAEP
Trigger: AGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGG...AAAAACTGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGACCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGCAGGGGTTTGAGACCTaGCTGGGCAACACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWQGFET*LGNTGR
Trigger: CCTCCCTGTGTTGCCCAGGCAGGTCTCAAACCCCTG...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCATGGCGGCCGGGAAGATaGGCTCCTCACTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPWRPGR*APHFQD
Trigger: GTCTTGGAAGTGAGGAGCGCATCTTCCCGGCCGCCA...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCCATGTGGTTTGCCCGTaGTTGCCGTTCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: PLPSSAPNKESKPAASVSHVVCP*LPFPSK
Trigger: TTTACTGGGGAACGGCAACCACGGGCAAACCACATG...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCTCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTGGGCACGAACTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: LGTNCTRPLTTVRGSASPSRGST*RFIPSI
Trigger: TATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGA...GGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAGTTCGTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp AGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATTGGCTTCTGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRDGMTSSGSEF*AGPLAIGFCFE
Trigger: CTCAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACAGCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: FQVAQHHYQPVLQFLLGHSPAWS*SWFAST
Trigger: AGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCT...GTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCTCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
CDS-3UTR GCA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGGGGTTTCAGGTTaGACAGCACCACTACCAGCC +
Preference number: 4 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLSGVSG*TAPLPA
Trigger: GGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGA...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPERVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGCCTTTGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: GLWPLASALRDLGRQRWPDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...TGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGCAGCCAGGCAGAGGCTaGAATCTCGGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQQPGRG*NLGTLG
Trigger: TCCCAAAGTGCCGAGATTGCAGCCTCTGCCTGGCTG...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTCATGTGGTTTGCCCGTaGTTGCCGTTCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAHVVCP*LPFPSK
Trigger: TTTACTGGGGAACGGCAACCACGGGCAAACCACATG...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGTTTTTTCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: WPLASALRDLGRQRWPVFSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...AAAAACTGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
3UTR CAA 72 bp GGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGTaGTCACCAGGCACATGGGCTCTGGAGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GVNPTGAGAASW*SPGTWALEFER
Trigger: TCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp CTGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTGAAGTCTGCAATCTTTaGCATGGGCACAAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LYQAAHHSPWFSFPHVNLEVCNL*HGHKVS
Trigger: GCTTACTTTGTGCCCATGTCAAAGATTGCAGACTTC...AAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGCCTAGCTCACATGCATaGCTATTCCTAGCCCACATG +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEPSSHA*LFLAHM
Trigger: CATGTGGGCTAGGAATAGTCATGCATGTGAGCTAGG...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCACCGTCGCCGCCGCGTaGCGGGAACTGTCACGCGAG +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGTVAAA*RELSRE
Trigger: CTCGCGTGACAGTTCCCGGCACGCGGCGGCGACGGT...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGTTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTAAGCCACATGTGGTTTaGCCGTGGTTGCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSIKPHVV*PWLPFP
Trigger: GGGGAACGGCAACCACGGGCAAACCACATGTGGCTT...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTCTGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: VCIWVLLHSDDFPHTDIQPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...CTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: GAEPAGGSRGSTWRFIPSKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...AGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGACTGTCTGCATCTGGGTaGTTCTCCACAGTGATGATT +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGLSASG*FSTVMI
Trigger: AATCATCACTGTGGAGAAGCACCCAGATGCAGACAG...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: DALWRSTPPSMKTESLSATTSLS*SSSLGT
Trigger: CGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGT...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGTCTGGGGTTTCAGGTTaGACAGCACCACTACCAGCC +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKSGVSG*TAPLPA
Trigger: GGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGA...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGCCCTTCACAAACACGTaGTCACCAGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKPFTNT*SPGAEP
Trigger: AGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGG...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTATTTTGAAGTCAGCCTaGAACTTCTCGAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPILKSA*NFSKTF
Trigger: GAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAAAAT...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPVMKLV*FHCAMH
Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTGAGGTGGGAGAACTaGTTGAGCCCAGGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSLRWEN*LSPGCR
Trigger: TCGACAGCCTGGGCTCAAGCAGTTCTCCCACCTCAG...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGAAAGTAAGCCACATGTaGTTTGCCCGTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWKVSHM*FARGCR
Trigger: ACGGCAACCACGGGCAAACCACATGTGGCTTACTTT...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ACRRVQRFNLAVYPFYRSVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...GCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSLELLI*LALFIA
Trigger: GGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAG...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 4 (lower is better)
Translates to: ACRRVQRFNLAVYPFYRSPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...GCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTACTACCCGGGTGTTGTaGCATGCACCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSITTRVL*HAPVVP
Trigger: TGGGACCACAGGTGCATGCCACAACACCCGGGTAGT...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCAGGGGAAGGCTTGTaGCTTATATCTATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPSGEGL*LISILL
Trigger: CAACAAAATAGATATAAGCCACAAGCCTTCCCCTGA...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGAGAATCAGGGCAGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATCCTCACTTCCCAGATaGGGTGGCAGCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RESGQPVPEGRVCDKSQVSSLPR*GGSQAE
Trigger: CTCTGCCTGGCTGCCACCCCATCTGGGAAGTGAGGA...TACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCTGCCCTGATTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CCA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGACCACATCTGAGACGATaGGCAGCCGGGCAGAGACGC +
Preference number: 4 (lower is better)
Translates to: DSSSEELILLPVNPGTIGPHLRR*AAGQRR
Trigger: GCGTCTCTGCCCGGCTGCCCATCGTCTCAGATGTGG...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR TCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGAAGTCTGCAATCTTTaGCATGGGCACAAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPEVCNL*HGHKVS
Trigger: GCTTACTTTGTGCCCATGTCAAAGATTGCAGACTTC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACACGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCACTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRISSRDGMTSSGSEFLALGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...TGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: MKDRTPLFSTFPGSQKAFAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...GAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCGCTGCTTCCGTGTCCTaGGAGATGGGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPAASVS*EMGKWV
Trigger: CACCCATTTACCCATCTCTCAGGACACGGAAGCAGC...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATGACAAATCACAAGTATaGTCACAGCACGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYDKSQV*SQHELF
Trigger: GAAAAGTTCGTGCTGTGATCATACTTGTGATTTGTC...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGTTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGTGGTTTGCCCGTGGTTaGCGTTCCCCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEWFARG*RSPVNF
Trigger: AAAATTTACTGGGGAACGGCAACCACGGGCAAACCA...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGAAAGCCACATGTGGTTTaGCCGTGGTTGCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGKPHVV*PWLPFP
Trigger: GGGGAACGGCAACCACGGGCAAACCACATGTGGCTT...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCAAGCCACATGTGGTTTaGCCGTGGTTGCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQQQSPFPGPRKLCRFCFKPHVV*PWLPFP
Trigger: GGGGAACGGCAACCACGGGCAAACCACATGTGGCTT...GAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACATCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674629.1
CDS-3UTR GCA 90 bp GGCCTTTGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCATCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: GLWPLASALRDLGRQRWPSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...TGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATGCACTCCTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: MEPSLVMKLVCFHCAMHSYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...GGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCTCTGGGGTTTCAGGTTaGACAGCACCACTACCAGCC +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPSGVSG*TAPLPA
Trigger: GGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGA...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCCCCTTCACAAACACGTaGTCACCAGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKAPFTNT*SPGAEP
Trigger: AGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGG...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: PLPSSAPNKESKPAASVSRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGTAGGATCACAAACTCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: RRITNSDLRGKRTCLMKDVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...GTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGAGTTTGTGATCCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000616261.2
ENST00000674629.1
CDS-3UTR CCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGATTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGLSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGGGCCTTTGCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSRDGMTSSGSEFLAGPLQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...CAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTTCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVRGSASPTSIFSTYRLSSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...AGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGCAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: FIPSIEAHRSMPWDSTPLPAVPP*ARTVPG
Trigger: GCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGG...GAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: PLPSSAPNKESKPAASVSSRGST*RFIPSI
Trigger: TATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGA...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: CTRPLTTVRGSASPTSIFSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...GAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVWNRAV*PRRRVC
Trigger: ACAGACTCTCCTCCGTGGTCACACAGCACGATTCCA...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGAGAATCAGGGCAGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTACATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RESGQPVPEGRVCDKSQVHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...TACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCTGCCCTGATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCCTAACAACACGCAGCTaGTTTAGGGAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPLTTRS*FRECPS
Trigger: GCTGGGACACTCCCTAAATCAGCTGCGTGTTGTTAG...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVRGSASPTSIFSTYRLSVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...AGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGACAGTGATGGGGATTTaGCTGAGATGCCTTATGGAG +
Preference number: 4 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPTVMGI*LRCLME
Trigger: CTCCATAAGGCATCTCAGTCAAATCCCCATCACTGT...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR TCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGCCTAGCCCACATGCATaGCTATTTGTAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEPSPHA*LFVVFA
Trigger: GGCAAAAACTACAAATAGTCATGCATGTGGGCTAGG...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DALWRSTPPSMKTESLSAKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
CDS-3UTR GCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSTTSLS*SSSLGT
Trigger: CGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGT...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACACTACCAGCCTGTCCTaGAGTTCCTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNTTSLS*SSSLGT
Trigger: CGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGT...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGAACAGAATTGTTACCTaGAGGTTCCGGGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPENRIVT*RFRVIR
Trigger: CCTTATCACCCGGAACCTGCAGGTAACAATTCTGTT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675785.1
CDS-3UTR CCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCTGGGAGCGTCCCCCATaGCTCCGCTACCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGWERPP*LRYPCF
Trigger: GAAGCAGGGGTAGCGGAGCCATGGGGGACGCTCCCA...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATAGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LHILLPIKEINLGLLEVIVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...TATGACTTCTAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp TCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGCATGTGGTTTGCCCGTaGTTGCCGTTCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SIEAHRSMPWDSTPLIFWHVVCP*LPFPSK
Trigger: TTTACTGGGGAACGGCAACCACGGGCAAACCACATG...CCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCACAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RTEPHCSPHFLAHRRPSSQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...TGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCCCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISPAVPP*ARTVPG
Trigger: GCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGG...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp CCCCCTTTCAGCGATTTACAGGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGCTTCCACTGTGCGATG +
Preference number: 4 (lower is better)
Translates to: PPFSDLQEMEPS*VMKLVCFHCAM
Trigger: CATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGAAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGTGTGTACTCTTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TVRGSASPTSIFSTYRLSVCTLC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAAGAGTACACAC...AGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GTTGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGLLPLCDALLRNFEVSLQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...CAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACCTCTGCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATGGTTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSAHSSIPSEPSLVTNIWFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...CCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGCAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: DALWRSTPPSMKTESLSAHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QNPIVLHISWLTEGLLQFKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...AAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELIPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCTCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
CDS-3UTR GCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DALWRSTPPSMKTESLSAYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCCTTCACAAACACGTaGTCACCAGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVPFTNT*SPGAEP
Trigger: AGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGG...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAATTTTGAAGTCAGCCTaGAACTTCTCGAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGILKSA*NFSKTF
Trigger: GAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAAAAT...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCAGTAAATCCAACAGGTaGGGGAGCAGCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: MKDRTPLFSTFPGSQKAFSKSNR*GSSFLV
Trigger: AACCAGGAAGCTGCTCCCGCACCTGTTGGATTTACT...GAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGCATGTGGTTTGCCCGTaGTTGCCGTTCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTHVVCP*LPFPSK
Trigger: TTTACTGGGGAACGGCAACCACGGGCAAACCACATG...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCAAAGTAAGCCACATGTaGTTTGCCCGTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPKVSHM*FARGCR
Trigger: ACGGCAACCACGGGCAAACCACATGTGGCTTACTTT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPEKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTGATATCCAGCCGGGATaGGATGACCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVDIQPG*DDLLWF
Trigger: GAACCAGAGGAGGTCATCCCATCCCGGCTGGATATC...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTCAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACCTGCAGTTCCTCCTTaGGCACGAACTGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLPAVPP*ARTVPG
Trigger: GCCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSLELLI*LALFIA
Trigger: GGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAG...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACCTCTGCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATGGAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: TSAHSSIPSEPSLVTNIWRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...CCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGGGCCTTTGTCAGGGGAAGGCTTGTaGCTTATATCTATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SSRDGMTSSGSEFLAGPLSGEGL*LISILL
Trigger: CAACAAAATAGATATAAGCCACAAGCCTTCCCCTGA...CAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGGAAGTCTGCAATCTTTaGCATGGGCACAAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWEVCNL*HGHKVS
Trigger: GCTTACTTTGTGCCCATGTCAAAGATTGCAGACTTC...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp ACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGAAGTCTGCAATCTTTaGCATGGGCACAAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: TVRGSASPTSIFSTYRLSEVCNL*HGHKVS
Trigger: GCTTACTTTGTGCCCATGTCAAAGATTGCAGACTTC...AGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTCATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCGTGTGTACTCTTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPVCTLC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAAGAGTACACAC...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACCTCTGCCCACTCCAGTATTCCCTCAGAACCTAGCCTGGTAACGAATATATGGGTGTGTACTCTTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSAHSSIPSEPSLVTNIWVCTLC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAAGAGTACACAC...CCATATATTCGTTACCAGGCTAGGTTCTGAGGGAATACTGGAGTGGGCAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481895.6
ENST00000676297.1
CDS-3UTR TCA 90 bp CAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTATGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QGDQSWTPLLKSSFCCLLWNRAV*PRRRVC
Trigger: ACAGACTCTCCTCCGTGGTCACACAGCACGATTCCA...TAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TTTTCCCGGATTGGATCCAGCAACTTGTTCAGTGCGACTTCAACAGAATTCTTCTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSRIGSSNLFSATSTEFFWNRAV*PRRRVC
Trigger: ACAGACTCTCCTCCGTGGTCACACAGCACGATTCCA...GAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674629.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCCAGATGGACCCGTTTTaGATAGCCAAGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ILDSSSEELILLPVNPGTQMDPF*IAKCRE
Trigger: CTCCCTGCACTTGGCTATTCAAAACGGGTCCATCTG...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FIPSIEAHRSMPWDSTPLLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...GAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACAGCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHSPAWS*SWFAST
Trigger: AGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCT...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACTAACAACACGCAGCTaGTTTAGGGAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVLTTRS*FRECPS
Trigger: GCTGGGACACTCCCTAAATCAGCTGCGTGTTGTTAG...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCACTAACAACACGCAGCTaGTTTAGGGAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSLTTRS*FRECPS
Trigger: GCTGGGACACTCCCTAAATCAGCTGCGTGTTGTTAG...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CCCTTTCAGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PFQRFTGNGAQLGHEVGLVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...CAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCTGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTCATCCAAAGCTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: MKDRTPLFSTFPGSQKAFSSKAC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAGCTTTGGATGA...GAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674654.1
CDS-3UTR GCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SFRSRRSILDSSSEELILAFLES*CVTTEE
Trigger: CTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGC...CAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FTSSFRSRRSILDSSSEEKGCST*FTTSAP
Trigger: TGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTT...CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATAGAACGGAAGAGGACCTCTCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACC +
Preference number: 4 (lower is better)
Translates to: IKEINLGLLEVIERKRTSPLSKG*STCFTT
Trigger: GGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGG...AGAGGTCCTCTTCCGTTCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPESFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: RVSCPLPSSAPNKESKPAQQLVQ*DFNRIL
Trigger: AAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTG...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWQQLVQ*DFNRIL
Trigger: AAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTG...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAGCCTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTGGTCTGTCTGCATCTGGGTaGTTCTCCACAGTGATGATT +
Preference number: 4 (lower is better)
Translates to: SACNFSKTFFLGLSSSSGLSASG*FSTVMI
Trigger: AATCATCACTGTGGAGAAGCACCCAGATGCAGACAG...ACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACCTGGGGAGGGTAAGCTaGCCCTTGCCGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDLGRVS*PLPSSA
Trigger: TGCAGAACTCGGCAAGGGGCAGCTTACCCTCCCCAG...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCCCAGATTTCTCCAGCTaGCAAGGGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ILDSSSEELILLPVNPGTPDFSS*QGKKVG
Trigger: CCCTACCTTCTTCCCTTGGCAGCTGGAGAAATCTGG...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCGTTTCTCTTCAGGGCTaGGAGCGTCCCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: FPPHFSSRRITNSIRKRIVSLQG*ERPPWL
Trigger: GAGCCATGGGGGACGCTCCCAGCCCTGAAGAGAAAC...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCCATGTGGTTTGCCCGTaGTTGCCGTTCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGHVVCP*LPFPSK
Trigger: TTTACTGGGGAACGGCAACCACGGGCAAACCACATG...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTAAAGTAAGCCACATGTaGTTTGCCCGTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVKVSHM*FARGCR
Trigger: ACGGCAACCACGGGCAAACCACATGTGGCTTACTTT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQLSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGATCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DSSSEELILLPVNPGTIGSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGCTCACCACAGTCCGTaGTTCAGCTTCCCCCACGTC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDAHHSP*FSFPHV
Trigger: GACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GTTCAGTGCGACTTCAACAGAATTCTTCAGGTCTCCAGGATGTACAACCTCAGCCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: VQCDFNRILQVSRMYNLSLELLI*LALFIA
Trigger: GGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAG...GCTGAGGTTGTACATCCTGGAGACCTGAAGAATTCTGTTGAAGTCGCACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTACTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVLELLI*LALFIA
Trigger: GGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAG...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAGCCCTTGTTAGGGGTTaGTCTCTCACTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGALVRG*SLTAAR
Trigger: TCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACAAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCGCGGGAGCAGCTTCCTaGTTGTCACCAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: FPPHFSSRRITNSIRKRIAGAAS*LSPGTW
Trigger: CCATGTGCCTGGTGACAACCAGGAAGCTGCTCCCGC...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp AAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTGCAACTCTCCTGCCTTaGCCCAGGGGTTTGAGACCT +
Preference number: 4 (lower is better)
Translates to: KLCRFCFHPISHLVGSQTATLLP*PRGLRP
Trigger: AGGTCTCAAACCCCTGGGCCAAGGCAGGAGAGTTGC...AGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CAA 72 bp GTTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTaGGGACTCGACTCCTCTCATCTTCTGGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VYPFYRSTQKHA*GLDSSHLLGFQ
Trigger: CTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp TTGAAGTCAGCCTGCAACTTCTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCTGGTTGGCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LKSACNFSKTFF*GLSSSSGWPFS
Trigger: TGAAAAGGGCCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp GATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DLQEMEPSLVMK*VCFHCAMHSSE
Trigger: TTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTGAAGTCTGCAATCTTTaGCATGGGCACAAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSEVCNL*HGHKVS
Trigger: GCTTACTTTGTGCCCATGTCAAAGATTGCAGACTTC...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGTGTGTACTCTTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVVCTLC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAAGAGTACACAC...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000676297.1
CDS-3UTR TCA 90 bp CGTAGGATCACAAACTCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRITNSDLRGKRTCLMKDLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...GTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGAGTTTGTGATCCTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000616261.2
ENST00000674629.1
CDS-3UTR TCA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCCTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ILDSSSEELILLPVNPGTLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACTTGGACTCCTCTTCTaGAGAGCTCATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVLGLLF*RAHFAA
Trigger: GGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAG...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAATGGGCTCTGGAGTTTaGAAGATCTGGGTACTAATA +
Preference number: 4 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPMGSGV*KIWVLI
Trigger: TATTAGTACCCAGATCTTTCAAACTCCAGAGCCCAT...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTCCTAGCTCACATGCATaGCTATTCCTAGCCCACATG +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELIPSSHA*LFLAHM
Trigger: CATGTGGGCTAGGAATAGTCATGCATGTGAGCTAGG...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGTGGTTTGCCCGTGGTTaGCGTTCCCCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTWFARG*RSPVNF
Trigger: AAAATTTACTGGGGAACGGCAACCACGGGCAAACCA...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCCATGTTATCCAGGTATaGGTGGAGGTCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: ILDSSSEELILLPVNPGTHVIQV*VEVRKQ
Trigger: CTGTTTGCGGACCTCCACGCATACCTGGATAACATG...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCTTCATCCAAAGCCTaGAGTCCGGGGTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGSSSKA*SPGYKR
Trigger: CCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
CDS-3UTR GCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGCTGCAATCTTTGACATaGGCACAAAGTAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKLQSLT*AQSKPH
Trigger: ATGTGGCTTACTTTGTGCCCATGTCAAAGATTGCAG...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCTGCAATCTTTGACATaGGCACAAAGTAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKLQSLT*AQSKPH
Trigger: ATGTGGCTTACTTTGTGCCCATGTCAAAGATTGCAG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: DALWRSTPPSMKTESLSALSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKALSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTCTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELILVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACAGGCTGTCTGCATCTaGGTGCTTCTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLQAVCI*VLLHSD
Trigger: ATCACTGTGGAGAAGCACCCAGATGCAGACAGCCTG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCAGGGGCGCAGCTGCTTaGATAACTCCAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSRGAAA*ITPRKP
Trigger: AGGTTTTCTTGGAGTTATCCAAGCAGCTGCGCCCCT...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFTSSFRSRRSILDSSSEVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGCTTAAATTGGATGAGTaGCACTATTGTATACCCAGC +
Preference number: 4 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPLKLDE*HYCIPS
Trigger: GCTGGGTATACAATAGTGCCACTCATCCAATTTAAG...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGGGTTTCATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: RSTQKHALGLDSSHLLGFHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...AAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACAACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: CRRVQRFNLAVYPFYRSTTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...TGTGCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCCATTGGCTTCTGCTTTaGGGGATCTGGGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGHWLLL*GIWVGS
Trigger: GCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATG...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAAGCCCAGCTTGGTCATaGAGTTGGTTTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLSPAWS*SWFAST
Trigger: AGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCT...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAGTACCCCACCCTCTATaGAGACAGAATCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLVPHPL*RQNHSL
Trigger: CAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTAC...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGGACAAATCACAAGTATaGTCACAGCACGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQDKSQV*SQHELF
Trigger: GAAAAGTTCGTGCTGTGATCATACTTGTGATTTGTC...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGCCTAGCCCACATGCATaGCTATTTGTAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTPSPHA*LFVVFA
Trigger: GGCAAAAACTACAAATAGTCATGCATGTGGGCTAGG...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAATTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FFTSSFRSRRSILDSSSEFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAATTCCGGGTGATAAGGTaGAGTTTCTCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQFRVIR*SFSSGL
Trigger: CAGCCCTGAAGAGAAACTGCACCTTATCACCCGGAA...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTGGTTTGCCCGTGGTTaGCGTTCCCCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGWFARG*RSPVNF
Trigger: AAAATTTACTGGGGAACGGCAACCACGGGCAAACCA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGTAGGATCACAAACTCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACTGGTTTGCCCGTGGTTaGCGTTCCCCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: RRITNSDLRGKRTCLMKDWFARG*RSPVNF
Trigger: AAAATTTACTGGGGAACGGCAACCACGGGCAAACCA...GTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGAGTTTGTGATCCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616261.2
CDS-3UTR GCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCTGGTTTGCCCGTGGTTaGCGTTCCCCAGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSWFARG*RSPVNF
Trigger: AAAATTTACTGGGGAACGGCAACCACGGGCAAACCA...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAAGCCACATGTGGTTTaGCCGTGGTTGCCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VLFPPHFSSRRITNSIRKKPHVV*PWLPFP
Trigger: GGGGAACGGCAACCACGGGCAAACCACATGTGGCTT...TTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: MKDRTPLFSTFPGSQKAFKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...GAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAGCCTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTGGTCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SACNFSKTFFLGLSSSSGLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...ACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACCTGTCTGCATCTGGGTaGTTCTCCACAGTGATGATT +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNLSASG*FSTVMI
Trigger: AATCATCACTGTGGAGAAGCACCCAGATGCAGACAG...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGVMKLV*FHCAMH
Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATAGAACGGAAGAGGACCTCTAAAGTAAGCCACATGTaGTTTGCCCGTGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: IKEINLGLLEVIERKRTSKVSHM*FARGCR
Trigger: ACGGCAACCACGGGCAAACCACATGTGGCTTACTTT...AGAGGTCCTCTTCCGTTCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTCTGCAATCTTTGACATaGGCACAAAGTAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSILQSLT*AQSKPH
Trigger: ATGTGGCTTACTTTGTGCCCATGTCAAAGATTGCAG...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QNPIVLHISWLTEGLLQFQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...AAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FIPSIEAHRSMPWDSTPLQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...GAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELIVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACTGGTTCTGAATTCTTaGCAGGGCCTTTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLLVLNS*QGLWPL
Trigger: CAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: RTEPHCSPHFLAHRRPSSRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...TGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACTTGTCACCAGGCACATaGGCTCTGGAGTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNLSPGT*ALEFER
Trigger: TCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAA...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGACCTCTCCTTGGAAACTaGGCTATTAGGAAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGPLLGN*AIRKGV
Trigger: TACTCCTTTCCTAATAGCCCAGTTTCCAAGGAGAGG...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGTCAGGGGAAGGCTTGTaGCTTATATCTATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWSGEGL*LISILL
Trigger: CAACAAAATAGATATAAGCCACAAGCCTTCCCCTGA...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CAA 72 bp CTTCCTGGTTGTCACCAGGCACATGGGCTCTGGAGTTaGAAAGATCTGGGTACTAATAATTCCTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LPGCHQAHGLWS*KDLGTNNSCSV
Trigger: AACTGAGCAGGAATTATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATGTGCCTGGTGACAACCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
3UTR CAA 72 bp ACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCACTCCTCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: TGNGAQLGHEVG*LPLCDALLRNF
Trigger: AAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCTCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACTGTCTGCATCTGGGTaGTTCTCCACAGTGATGATT +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLLSASG*FSTVMI
Trigger: AATCATCACTGTGGAGAAGCACCCAGATGCAGACAG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCTCTGGGGTTTCAGGTTaGACAGCACCACTACCAGCC +
Preference number: 4 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSSGVSG*TAPLPA
Trigger: GGCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGA...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCATTTTGAAGTCAGCCTaGAACTTCTCGAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPILKSA*NFSKTF
Trigger: GAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAAAAT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGVMKLV*FHCAMH
Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACAGAGTCCAAACCCGCTaGTTCCGTGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDRVQTR*FRVLRD
Trigger: ATCTCTCAGGACACGGAAGCAGCGGGTTTGGACTCT...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVLSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACCAAGGAGATCAATCTTaGACTCCTCTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNQGDQS*TPLLKS
Trigger: GCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTAAACTTTTCCCGGATTaGATCCAGCAACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVKLFPD*IQQLVQ
Trigger: CTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTCTTGGCAGGGCCTTTaGCCATTGGCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDSWQGL*PLASAL
Trigger: CAAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGA...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCCACAGAAGCATGCCTTaGGACTCGACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGHRSMP*DSTPLI
Trigger: GATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTG...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGTGTCCCAGCCTAGCTaGATCAAGGGAAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDVSQPS*IKGNSR
Trigger: CCTGGAATTTCCCTTGATCCAGCTAGGCTGGGACAC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCCAAGGAGATCAATCTTaGACTCCTAGAAGTCATAGA +
Preference number: 4 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPQGDQS*TPRSHR
Trigger: TCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTG...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTATCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTATTTACCATACACTATaGCTAGTGGGACTGACACAT +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVIYHTL*LVGLTH
Trigger: ATGTGTCAGTCCCACTAGTCATAGTGTATGGTAAAT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp ATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATAGAACGGAAGAGGACCTCTGAACCAAATGCTCTGTaGAAGGACAGTAGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: IKEINLGLLEVIERKRTSEPNAL*KDSSSN
Trigger: GTTGGAACTACTGTCCTTTCACAGAGCATTTGGTTC...AGAGGTCCTCTTCCGTTCTATGACTTCTAGGAGTCCAAGATTGATCTCCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR TCA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCCCTAGCTCACATGCATaGCTATTCCTAGCCCACATG +
Preference number: 4 (lower is better)
Translates to: FPPHFSSRRITNSIRKRIPSSHA*LFLAHM
Trigger: CATGTGGGCTAGGAATAGTCATGCATGTGAGCTAGG...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTATCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTAAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: FTSSFRSRRSILDSSSEEKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GTTGGTTTGCTTCCACTGTGCGATGCACTCCTCAGAAATTTTGAAGTCAGCCTGCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: VGLLPLCDALLRNFEVSLQQLVQ*DFNRIL
Trigger: AAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTG...CAGGCTGACTTCAAAATTTCTGAGGAGTGCATCGCACAGTGGAAGCAAACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGAGAATCAGGGCAGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTAATTTTGAAGTCAGCCTaGAACTTCTCGAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: RESGQPVPEGRVCDKSQVILKSA*NFSKTF
Trigger: GAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAAAAT...TACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCTGCCCTGATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAAGACATTGGGAAAGTTaGCAACCACTTGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGRHWES*QPLGRP
Trigger: TGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTTTCAATAAACACAGCTaGATACCTCTGAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFFNKHS*IPLRCK
Trigger: CTTGCACCTCAGAGGTATGCAGCTGTGTTTATTGAA...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTCTGCAATCTTTGACATaGGCACAAAGTAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVLQSLT*AQSKPH
Trigger: ATGTGGCTTACTTTGTGCCCATGTCAAAGATTGCAG...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLSRGST*RFIPSI
Trigger: TATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGA...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACCTTGAGCTCCTCATCTaGTTGGCCCTTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDLELLI*LALFIA
Trigger: GGCTATGAAAAGGGCCAACCAGATGAGGAGCTCAAG...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGCGATTTACAGGAAATGGAGCCCAGCTTGGTCATGAAGTTGGTTTGCTTCCACAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SDLQEMEPSLVMKLVCFHNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...GTGGAAGCAAACCAACTTCATGACCAAGCTGGGCTCCATTTCCTGTAAATCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp TTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: FTSSFRSRRSILDSSSEERVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCGTGTGTACTCTTTGCTaGGCTGGTAATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGVCTLC*AGNQCL
Trigger: AAGGCACTGATTACCAGCTCAGCAAAGAGTACACAC...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGCAGGGAGGTATGTGTaGTATTGGACAACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: FFTSSFRSRRSILDSSSEAGRYV*YWTTSY
Trigger: ATAAGAAGTTGTCCAATATCACACATACCTCCCTGC...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616261.2
CDS-3UTR GCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTATCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: SSFRSRRSILDSSSEELISFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAAAGAGCTCATTTTGCTaGCTGTTAATCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGKSSFC*LLILEP
Trigger: TGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTT...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFRSRRSILDSSSEELILLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...CAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCTACATACAGGCTGTCTaGATCTGGGTGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSYIQAV*IWVLLH
Trigger: GTGGAGAAGCACCCAGATGCAGACAGCCTGTATGTA...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCAATTTTGAAGTCAGCCTaGAACTTCTCGAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSILKSA*NFSKTF
Trigger: GAAAGTCTTCGAGAAGTTGCAGGCTGACTTCAAAAT...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGTCATGAAGTTGGTTTaGTTCCACTGTGCGATGCAC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDVMKLV*FHCAMH
Trigger: GTGCATCGCACAGTGGAAGCAAACCAACTTCATGAC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCGACACTCACCTTCTCTaGAAAGGTGAAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGDTHLL*KGENLS
Trigger: AGAAAGATTTTCACCTTTGCAGAGAAGGTGAGTGTC...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCCTCAGTGTTCTCATCTaGAAAACAAGGAGAATATTT +
Preference number: 4 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKALSVLI*KTRRIF
Trigger: AAATATTCTCCTTGTTTTGCAGATGAGAACACTGAG...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTAGAAAAAGAAAAAGATaGTGGGAAATGCGAACCAAA +
Preference number: 4 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSIRKRKR*WEMRTK
Trigger: TTTGGTTCGCATTTCCCAGCATCTTTTTCTTTTTCT...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp CAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTACTGCAATCTTTGACATaGGCACAAAGTAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: QGDQSWTPLLKSSFCCLLLQSLT*AQSKPH
Trigger: ATGTGGCTTACTTTGTGCCCATGTCAAAGATTGCAG...TAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGTTCTCCACATTTCCTaGCTCACAGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDVLHIS*LTEGLL
Trigger: AAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAAC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACCCCACAGTTTCCTGTTaGGGAGAAGCTGTAATTAGC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDPTVSC*GEAVIS
Trigger: GCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGG...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTAAAAGAAAAAGATGCTaGGAAATGCGAACCAAATGC +
Preference number: 4 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVKRKRC*EMRTKC
Trigger: GCATTTGGTTCGCATTTCCCAGCATCTTTTTCTTTT...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCCTGGTCTCAAACTTCTaGGCTCAAGCAACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSLVSNF*AQATLL
Trigger: CAGGAGAGTTGCTTGAGCCCAGAAGTTTGAGACCAG...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACCTTAAATTGGATGAGTaGCACTATTGTATACCCAGC +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNLKLDE*HYCIPS
Trigger: GCTGGGTATACAATAGTGCCACTCATCCAATTTAAG...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp AGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGAACCATAGGATTCATC +
Preference number: 4 (lower is better)
Translates to: RSILDSSSEELI*LPVNPGTIGFI
Trigger: GATGAATCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAACATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGACATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCACTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISTSLQR*KSFSDQ
Trigger: TTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGT...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTGAAGAGCTCATTTTaGTGCCTGTTAATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLCRFCFHPISHLVGSQTLKSSF*CLLILE
Trigger: TTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAG...AGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGACAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: SILDSSSEELILLPVNPGQQLVQ*DFNRIL
Trigger: AAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTG...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGACAGAATCACTCTCTaGCATTCATTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDDRITL*HSFCLM
Trigger: CATCAGGCAGAATGAATGGCAGAGAGTGATTCTGTC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACGGTACTAATAATTCCTaGTCAGTTACTAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNGTNNS*SVTNCV
Trigger: CACACAGTTAGTAACTGAGCAGGAATTATTAGTACC...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR GCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTAGGAATGTGTCACCATaGCCAGGTAATTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFRNVSP*PGNSIF
Trigger: AAAAATAGAATTACCTGGGCATGGTGACACATTCCT...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATT +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGLSRYA*RSANRI
Trigger: AATTCTGTTTGCGGACCTCCACGCATACCTGGATAA...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACTTAAATTGGATGAGTaGCACTATTGTATACCCAGC +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLLKLDE*HYCIPS
Trigger: GCTGGGTATACAATAGTGCCACTCATCCAATTTAAG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp TCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: SFRSRRSILDSSSEELILNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...CAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTTCTTTCTCTGATCAATaGCTCCAAATTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: KLCRFCFHPISHLVGSQTSFSDQ*LQIGHL
Trigger: TAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGA...AGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTGTTCTCATCTTCTCTaGAAAGGTGAAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGCSHLL*KGENLS
Trigger: AGAAAGATTTTCACCTTTGCAGAGAAGATGAGAACA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616261.2
CDS-3UTR CCA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCAGAGTAAGCAGACATTaGGAAAGTTGCCAACCACTT +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGRVSRH*ESCQPL
Trigger: AAGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCT...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCCATTCTCATAGTAACTaGCTCGGAGTTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: FPPHFSSRRITNSIRKRIHSHSN*LGVLEV
Trigger: AACTTCTAGAACTCCGAGTCAGTTACTATGAGAATG...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR GCA 90 bp AAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTAATGCTCTCCAGCATTaGTTTGATCACATTCTCATA +
Preference number: 4 (lower is better)
Translates to: KLCRFCFHPISHLVGSQTNALQH*FDHILI
Trigger: TATGAGAATGTGATCAAAGCAATGCTGGAGAGCATT...AGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CCA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLSMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CCA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCAACTCCAAGAAAACCTaGGCACCAGTATTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGNSKKT*APVFFQ
Trigger: TTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTT...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR TCA 90 bp GTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAATCTCCAGCATTGCTTTaGTCACATTCTCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: VLFPPHFSSRRITNSIRKSPALL*SHSHSN
Trigger: GTTACTATGAGAATGTGATCAAAGCAATGCTGGAGA...TTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR TCA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCGACAAATCACAAGTATaGTCACAGCACGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSDKSQV*SQHELF
Trigger: GAAAAGTTCGTGCTGTGATCATACTTGTGATTTGTC...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
3UTR CAA 72 bp TGGACTCCTAGAAGTCATAGAACGGAAGAGGACCTCTaGTGGTTGAAAATGAGAATATGCTCAACTAATATA +
Preference number: 4 (lower is better)
Translates to: WTPRSHRTEEDL*WLKMRICSTNI
Trigger: TATATTAGTTGAGCATATTCTCATTTTCAACCACAAGAGGTCCTCTTCCGTTCTATGACTTCTAGGAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CCA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCTCAATGCCTCCAAATTaGGCATCTACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: FPPHFSSRRITNSIRKRISMPPN*ASTFKY
Trigger: GTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGA...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS CCA 90 bp CAAGACTGGGCGGCCGGGCAGAGGGGCTCCTCACATCCCAGACGATaGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGATGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: QDWAAGQRGSSHPRR*AARQRRSSLPRWGG
Trigger: GCCACCCCATCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CAA 90 bp CGGGGTGGCGGTCGGGCAGAGACACTCCTCAGTTCCCAGACCGGGTCGCGGCCGCAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RGGGRAETLLSSQTGSRPQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...CGGCCGCGACCCGGTCTGGGAACTGAGGAGTGTCTCTGCCCGACCGCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CAA 90 bp GGCCTTTGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGCGAGTCCAGCCAGGTaGCATCAGCTGGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: GLWPLASALRDLGRQRWPASPAR*HQLGSA
Trigger: CGCCGAGCCCAGCTGATGCAACCTGGCTGGACTCGC...TGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGGTGCTCCCCACATCTGAGACGATGGGCAGCCGGGCAGAGACGCTCCTCACTTTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: RCSPHLRRWAAGQRRSSLSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...AAGTGAGGAGCGTCTCTGCCCGGCTGCCCATCGTCTCAGATGTGGGGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS TCA 90 bp GTGACTGTGGAGGCCAAAGCAATCCGGGCCTTTACACAGGGGCCCTaGTGGGATTTAGGGCATCCTCAGTACCAGAGCCCCAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VTVEAKAIRAFTQGP*WDLGHPQYQSPRRS
Trigger: GGACCTCCTGGGGCTCTGGTACTGAGGATGCCCTAAATCCCATCAGGGCCCCTGTGTAAAGGCCCGGATTGCTTTGGCCTCCACAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp CCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTGTGGTTTGCCCGTGGTaGCCGTTCCCCAGTAAATTT +
Preference number: 5 (lower is better)
Translates to: PGAEPAGGSRGSTWRFIPVVCPW*PFPSKF
Trigger: AAATTTACTGGGGAACGGCAACCACGGGCAAACCAC...AGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AACACGTGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: NTCSPGAEPAGGSRGSTWTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...CCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS CCA 90 bp TGCTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTCTGGGAAGACACAGGACAAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: CSPGAEPAGGSRGST*RFIPSLGRHRTREE
Trigger: CTCTTCTCTTGTCCTGTGTCTTCCCAGAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp CAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACGAATTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGC +
Preference number: 5 (lower is better)
Translates to: QVAQHHYQPVLQFLLGHEFWGFR*HSTTTS
Trigger: GCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAA...TTCGTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS TCA 90 bp TGGCAGGGCCTTTGGCCATTGGCTCTGGGAATGAGAAGAACCCCATaGGGTAGAATTCTTCCCTGTGGCAGGTCAGCTGCTGATCCCACC +
Preference number: 5 (lower is better)
Translates to: WQGLWPLALGMRRTP*GRILPCGRSAADPT
Trigger: GGTGGGATCAGCAGCTGACCTGCCACAGGGAAGAATTCTACCTCATGGGGTTCTTCTCATTCCCAGAGCCAATGGCCAAAGGCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS GCA 90 bp TGCAGTCCGGGGTATAAGAGGCCACTCAGCAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCAGCCTTCTTGGAATCGTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: CSPGYKRPLSKGCST*FTTSAPAFLESCCV
Trigger: CACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGGCCTCTTATACCCCGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373477.9
ENST00000470377.1
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGGGCCTTTGTTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGC +
Preference number: 5 (lower is better)
Translates to: SSRDGMTSSGSEFLAGPLFWGFR*HSTTTS
Trigger: GCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAA...CAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGTACCAGGCCGCTCACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCGAGCTCCTCATCTGGTaGGCCCTTTTCATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: CTRPLTTVRGSASPTSIFELLIW*ALFIAL
Trigger: AAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTC...GAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGTGAGCGGCCTGGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS GCA 90 bp TGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTaGATCTGGGTGCTGCCAGGGAGAGACGTCAGGAGGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: WFSFPHVNLLYIQAV*IWVLPGRDVRRKRI
Trigger: GATCCTCTTCCTCCTGACGTCTCTCCCTGGCAGCACCCAGATGCAGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS GCA 90 bp CTTTTCATAGCCCTTCACAAACACGTGCTCACCAGGAGCAGAGCCTaGCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFIALHKHVLTRSRA*RRVQRFNLAVYPFS
Trigger: AGAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAGCACGTGTTTGTGAAGGGCTATGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 90 bp AGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGCATCTaGGTGCTGCCAGGGAGAGACGTCAGGAGGAAGAGGATCATCGTC +
Preference number: 5 (lower is better)
Translates to: SFPHVNLLYIQAVCI*VLPGRDVRRKRIIV
Trigger: GACGATGATCCTCTTCCTCCTGACGTCTCTCCCTGGCAGCACCCAGATGCAGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp TTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACGTGGTTTGCCCGTGGTaGCCGTTCCCCAGTAAATTT +
Preference number: 5 (lower is better)
Translates to: FQVAQHHYQPVLQFLLGHVVCPW*PFPSKF
Trigger: AAATTTACTGGGGAACGGCAACCACGGGCAAACCAC...GTGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTCCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCTTCTTGGCAGGGCCTTaGGCCATTGGCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPFLAGP*AIGFCF
Trigger: AAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAA...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGTTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGC +
Preference number: 5 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWFWGFR*HSTTTS
Trigger: GCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAA...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: ACRRVQRFNLAVYPFYRSTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...GCTTCTATAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAGAGCTCCTCATCTGGTaGGCCCTTTTCATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGELLIW*ALFIAL
Trigger: AAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTC...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TACTCTTCATCCAAAGCCTGCAGTCCGGGGTATAAGAGGCCACTCAGCAAAGGGAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 5 (lower is better)
Translates to: YSSSKACSPGYKRPLSKGRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...CCCTTTGCTGAGTGGCCTCTTATACCCCGGACTGCAGGCTTTGGATGAAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674629.1
CDS-3UTR CAA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 5 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGCTGTGGCCCAGCCCTaGTTAGGGGTTGGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKAVAQP*LGVGLS
Trigger: TGAGAGACCAACCCCTAACAAGGGCTGGGCCACAGC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CTCACCAGGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 5 (lower is better)
Translates to: LTRSRACRRVQRFNLAVYQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...ATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCCTGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS GCA 90 bp TCCCCCACGTCAATCTTCTCTACATACAGGCTGTCTGCATCTGGGTaGTGCCAGGGAGAGACGTCAGGAGGAAGAGGATCATCGTCCATT +
Preference number: 5 (lower is better)
Translates to: SPTSIFSTYRLSASG*CQGETSGGRGSSSI
Trigger: AATGGACGATGATCCTCTTCCTCCTGACGTCTCTCCCTGGCAGCACCCAGATGCAGACAGCCTGTATGTAGAGAAGATTGACGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp CTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGTCCGCAAACAGAATaGTTACCTCACACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LVRGWSLTAARQDDPGFWGPQTE*LPHTLP
Trigger: AGGCAGGGTGTGAGGTAACAATTCTGTTTGCGGACC...CCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: GAEPAGGSRGSTWRFIPSSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...AGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: PLPSSAPNKESKPAASVSSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GTCTGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: VCIWVLLHSDDFPHTDIQSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...CTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGAGCTCCTCATCTGGTaGGCCCTTTTCATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: PLLGVGLSLQPDRMILGSELLIW*ALFIAL
Trigger: AAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTC...AGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCTGGGGAACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: VRGWSLTAARQDDPGFWGTFFLG*SSSSGW
Trigger: CCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...TCCCCAGAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GCCCTTGTTAGGGGTTGGTCTCTCACTGCAGCCAGACAGGATGATCCTGGGTTCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG +
Preference number: 5 (lower is better)
Translates to: ALVRGWSLTAARQDDPGFSLVMK*VCFHCA
Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...GAACCCAGGATCATCCTGTCTGGCTGCAGTGAGAGACCAACCCCTAACAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: PLPSSAPNKESKPAASVSEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCATCTTCTGGGGTTTAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 5 (lower is better)
Translates to: RSTQKHALGLDSSHLLGFRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...AAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAGCCTGCAACTTCTCGAAGACTTTCTTCTTGGGCTTGAGCTCCTCATCTGGTGCTGTGGCCCAGCCCTaGTTAGGGGTTGGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SACNFSKTFFLGLSSSSGAVAQP*LGVGLS
Trigger: TGAGAGACCAACCCCTAACAAGGGCTGGGCCACAGC...ACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGAGAAGTTGCAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGCCAGTCCCTGAAGGAAGAGTCTGTGACAAATCACAAGTATGATCACAGCACGAGGTGGGAGAACTGCTaGAGCCCAGGCTGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: SQSLKEESVTNHKYDHSTRWENC*SPGCRG
Trigger: GCCTCGACAGCCTGGGCTCAAGCAGTTCTCCCACCT...CGTGCTGTGATCATACTTGTGATTTGTCACAGACTCTTCCTTCAGGGACTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAGCGAGTCCAGCCAGGTaGCATCAGCTGGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQASPAR*HQLGSA
Trigger: CGCCGAGCCCAGCTGATGCAACCTGGCTGGACTCGC...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS TCA 90 bp CCTGCTTTACCACCTCAGCTCCAGCCTTCTTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGTACACATCTAGTGTGTACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PALPPQLQPSWNRAV*PRRRVCTHLVCTLC
Trigger: GCAGAGAGTACACACTAGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674629.1
CDS GCA 90 bp TGCTCCACCTGCTTTACCACCTCAGCTCCAGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAGAGTCTGTACACATCTAGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: CSTCFTTSAPAFLES*CVTTEESLYTSSVY
Trigger: GTACACACTAGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS GCA 90 bp CCCACGTCAATCTTCTCTACATACAGGCTGTCTGCATCTGGGTGCTaGCAGGGAGAGACGTCAGGAGGAAGAGGATCATCGTCCATTAGA +
Preference number: 5 (lower is better)
Translates to: PTSIFSTYRLSASGC*QGETSGGRGSSSIR
Trigger: TCTAATGGACGATGATCCTCTTCCTCCTGACGTCTCTCCCTGGCAGCACCCAGATGCAGACAGCCTGTATGTAGAGAAGATTGACGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp TGGCCATTGGCTTCTGCTTTGAGGGATCTGGGTAGGCAGCGCTGGCCAGTTTTTGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: WPLASALRDLGRQRWPVFVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...AAAAACTGGCCAGCGCTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGTCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKSAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQSAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RVSCPLPSSAPNKESKPASDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCATTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGC +
Preference number: 5 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPFWGFR*HSTTTS
Trigger: GCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAA...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGTTCTGGGGTTTCAGGTaGCACAGCACCACTACCAGC +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKFWGFR*HSTTTS
Trigger: GCTGGTAGTGGTGCTGTGCAACCTGAAACCCCAGAA...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGGAGCTCCTCATCTGGTaGGCCCTTTTCATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPELLIW*ALFIAL
Trigger: AAGGGCTATGAAAAGGGCCAACCAGATGAGGAGCTC...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG +
Preference number: 5 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPESLVMK*VCFHCA
Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGAGCAGCTTCCTGGTaGTCACCAGGCACATGGGCT +
Preference number: 5 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVGAASW*SPGTWA
Trigger: AGCCCATGTGCCTGGTGACAACCAGGAAGCTGCTCC...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGGTCCGCAAACAGAATaGTTACCTGCAGGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKGPQTE*LPAGSG
Trigger: CCCGGAACCTGCAGGTAACAATTCTGTTTGCGGACC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675785.1
CDS TCA 90 bp CCTGCTTTACCACCTCAGCTCCAGCCTTCTTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGTACACATCTAGTGTGTACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PALPPQLQPSWNRAV*PRRRVCTHLVCTLC
Trigger: GCAAAGAGTACACACTAGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000675785.1
ENST00000676297.1
CDS TCA 90 bp TGGCGGTTTATCCCTTCTCTGGGAAGACACAGGACAAGAGAAGAGTaGGGCTATGGATGGGTTCCAGTGACTGTGGAGGCCAAAGCAATC +
Preference number: 5 (lower is better)
Translates to: WRFIPSLGRHRTREE*GYGWVPVTVEAKAI
Trigger: GATTGCTTTGGCCTCCACAGTCACTGGAACCCATCCATAGCCTCACTCTTCTCTTGTCCTGTGTCTTCCCAGAGAAGGGATAAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGGGTCCGCAAACAGAATaGTTACCTCACACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKGPQTE*LPHTLP
Trigger: AGGCAGGGTGTGAGGTAACAATTCTGTTTGCGGACC...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACACGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTTGGCAGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: TRISSRDGMTSSGSEFLAVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...TGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: PLPSSAPNKESKPAASVSSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: GRVSCPLPSSAPNKESKPSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...GGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCCCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGTTCTTGGCAGGGCCTTaGGCCATTGGCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKFLAGP*AIGFCF
Trigger: AAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAA...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GTTTCAGGTTGCACAGCACCACTACCAGCCTGTCCTGCAGTTCCTCCTTGGGCACACTCCTCAGAAATTTaGAAGTCAGCCTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: VSGCTAPLPACPAVPPWAHSSEI*KSACNF
Trigger: GAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTG...TGCCCAAGGAGGAACTGCAGGACAGGCTGGTAGTGGTGCTGTGCAACCTGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGGAAAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCGCTGTGGCCCAGCCCTaGTTAGGGGTTGGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GKKDMLDEGQNPIVLHISAVAQP*LGVGLS
Trigger: TGAGAGACCAACCCCTAACAAGGGCTGGGCCACAGC...GGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGGGTAAGCTGCCCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGACAGTGATGGGGATTaGACTGAGATGCCTTATGGA +
Preference number: 5 (lower is better)
Translates to: RVSCPLPSSAPNKESKPADSDGD*TEMPYG
Trigger: TCCATAAGGCATCTCAGTCAAATCCCCATCACTGTC...AGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373477.9
ENST00000676297.1
CDS-3UTR CAA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTAAAACTACCCGGGTGTaGTGGCATGCACCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSIKTTRV*WHAPVV
Trigger: GACCACAGGTGCATGCCACAACACCCGGGTAGTTTT...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp ATGCTGGGAAATGCGAACCAAATGCTCTGTGAAAGGACAGTAGTTCCAACTGGTAGCAACTCTCCTGCCTaGGCCCAGGGGTTTGAGACC +
Preference number: 5 (lower is better)
Translates to: MLGNANQMLCERTVVPTGSNSPA*AQGFET
Trigger: GGTCTCAAACCCCTGGGCCAAGGCAGGAGAGTTGCT...ACCAGTTGGAACTACTGTCCTTTCACAGAGCATTTGGTTCGCATTTCCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCGCGAGTCCAGCCAGGTaGCATCAGCTGGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGASPAR*HQLGSA
Trigger: CGCCGAGCCCAGCTGATGCAACCTGGCTGGACTCGC...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS CCA 90 bp AAGCCATCTGATGCAGGAGCACCAGCATTGATCTCAGGGTGGTTTTaGTGGTTGGGGTACACAGTGAGAAGCAAATCCATGTCGAAGGGA +
Preference number: 5 (lower is better)
Translates to: KPSDAGAPALISGWF*WLGYTVRSKSMSKG
Trigger: TCCCTTCGACATGGATTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGAAGTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GDGWSRLKRQQMTQWWKKSDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...CTTCTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCTGAGTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: CRVLHRIKSPNPLLPCPESEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...CTCAGGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCTAGTTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCATCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: SSSTCLPPPLLLTPLPTPSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...TGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAACTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCATCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCCTGCAGTTCCTCCTaGGGCACGAACTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGSCSSS*GTNCTR
Trigger: CCTGGTACAGTTCGTGCCCAAGGAGGAACTGCAGGA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAACACAGAAGCATGCCTaGGGACTCGACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: RTEPHCSPHFLAHRRPSSTQKHA*GLDSSH
Trigger: ATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGT...TGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPSKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTTAAATACTCTTCATCCAAAGCCTCCCAGACGGGGTGGCGGTCGGGCAGAGACCACTCCTCAGAAATTTaGAAGTCAGCCTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: FKYSSSKASQTGWRSGRDHSSEI*KSACNF
Trigger: GAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTG...GTCTCTGCCCGACCGCCACCCCGTCTGGGAGGCTTTGGATGAAGAGTATTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKGHEVG*LPLCDA
Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTAAGGGTAAGCTGCCCCTaGCCGAGTTCTGCACCGAAT +
Preference number: 5 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVRVSCP*PSSAPN
Trigger: ATTCGGTGCAGAACTCGGCAAGGGGCAGCTTACCCT...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAGCTGTGGCCCAGCCCTaGTTAGGGGTTGGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SILDSSSEELILLPVNPGAVAQP*LGVGLS
Trigger: TGAGAGACCAACCCCTAACAAGGGCTGGGCCACAGC...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGCATCTGGGTGCTTCTCCACAGTGATGATTTTCCCCACACGGATATCCAGCCGGACAGTGATGGGGATTaGACTGAGATGCCTTATGGA +
Preference number: 5 (lower is better)
Translates to: CIWVLLHSDDFPHTDIQPDSDGD*TEMPYG
Trigger: TCCATAAGGCATCTCAGTCAAATCCCCATCACTGTC...CGGCTGGATATCCGTGTGGGGAAAATCATCACTGTGGAGAAGCACCCAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS-3UTR CAA 90 bp CCCTTGCCGAGTTCTGCACCGAATAAAGAGTCCAAACCCGCTGCTTCCGTGTCCATGTCAACAAACTCATaGACAGCATTCCTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: PLPSSAPNKESKPAASVSMSTNS*TAFLAH
Trigger: GTGAGCTAGGAATGCTGTCAATGAGTTTGTTGACAT...GGACACGGAAGCAGCGGGTTTGGACTCTTTATTCGGTGCAGAACTCGGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS GCA 90 bp ACGTCCCAGACAGCAGACAGGAGAATGGGCTCTGATGGTATACTCTaGTCTCAACTGAGGCCAGATTTGAGTAAAGTGGACCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: TSQTADRRMGSDGIL*SQLRPDLSKVDLDA
Trigger: AGCATCTAGGTCCACTTTACTCAAATCTGGCCTCAGTTGAGAGCAGAGTATACCATCAGAGCCCATTCTCCTGTCTGCTGTCTGGGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS GCA 90 bp TTTAGGGCATCCTCAGTACCAGAGCCCCAGGAGGTCCTCTTATCTTaGTACATCCCTGCATATCACCAGGGTTACATTAACCCAGGCTAT +
Preference number: 5 (lower is better)
Translates to: FRASSVPEPQEVLLS*YIPAYHQGYINPGY
Trigger: ATAGCCTGGGTTAATGTAACCCTGGTGATATGCAGGGATGTAGCAAGATAAGAGGACCTCCTGGGGCTCTGGTACTGAGGATGCCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 90 bp GTGGATGGCCAACTAAGAGCCAGGCCCATGCACATAGAAGGAAACTaGGAGAATCTAAAGATAAGCTTCTCTAAGCTCTGCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VDGQLRARPMHIEGN*ENLKISFSKLCRLC
Trigger: GCAGAGCCTGCAGAGCTTAGAGAAGCTTATCTTTAGATTCTCCCAGTTTCCTTCTATGTGCATGGGCCTGGCTCTTAGTTGGCCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS CCA 90 bp CCATCTGATGCAGGAGCACCAGCATTGATCTCAGGGTGGTTTTGGTaGTTGGGGTACACAGTGAGAAGCAAATCCATGTCGAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: PSDAGAPALISGWFW*LGYTVRSKSMSKGK
Trigger: TTTTCCCTTCGACATGGATTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 90 bp ATCTCTAAGCCATCTGATGCAGGAGCACCAGCATTGATCTCAGGGTaGTTTTGGTGGTTGGGGTACACAGTGAGAAGCAAATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: ISKPSDAGAPALISG*FWWLGYTVRSKSMS
Trigger: CGACATGGATTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGGCTTAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp CAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTGTGGTTTGCCCGTGGTaGCCGTTCCCCAGTAAATTT +
Preference number: 5 (lower is better)
Translates to: QNPIVLHISWLTEGLLQFVVCPW*PFPSKF
Trigger: AAATTTACTGGGGAACGGCAACCACGGGCAAACCAC...AAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTTCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFSAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LMKDRTPLFSTFPGSQKASDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...GGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTCAACATGTCTGCCCCCACCCTTACTTCTAACACCTCTGCCCACTCCAGTATTTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FNMSAPTLTSNTSAHSSISDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...AATACTGGAGTGGGCAGAGGTGTTAGAAGTAAGGGTGGGGGCAGACATGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTTCTTGGCAGGGCCTTaGGCCATTGGCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: QNPIVLHISWLTEGLLQFFLAGP*AIGFCF
Trigger: AAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAA...AAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTCTTGGCAGGGCCTTaGGCCATTGGCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TEPHCSPHFLAHRRPSSVFLAGP*AIGFCF
Trigger: AAAGCAGAAGCCAATGGCCAAAGGCCCTGCCAAGAA...AACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPTFFLG*SSSSGW
Trigger: CCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA +
Preference number: 5 (lower is better)
Translates to: DALWRSTPPSMKTESLSAGHEVG*LPLCDA
Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA +
Preference number: 5 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPGHEVG*LPLCDA
Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA +
Preference number: 5 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPGHEVG*LPLCDA
Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTGGTCATGAAGTTGGTTaGCTTCCACTGTGCGATGCA +
Preference number: 5 (lower is better)
Translates to: DRTPLFSTFPGSQKAFFSGHEVG*LPLCDA
Trigger: TGCATCGCACAGTGGAAGCAAACCAACTTCATGACC...ACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: RTEPHCSPHFLAHRRPSSEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...TGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 5 (lower is better)
Translates to: GQNPIVLHISWLTEGLLQQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...CTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACCACAGTCCGTGGTTCAGCTTCCCCCACGTCAATCTTCTCTACATACAGGCTGGCTTCAGGGGAAGGCTaGTGGCTTATATCTATTTTG +
Preference number: 5 (lower is better)
Translates to: TTVRGSASPTSIFSTYRLASGEG*WLISIL
Trigger: CAAAATAGATATAAGCCACAAGCCTTCCCCTGAAGC...CAGCCTGTATGTAGAGAAGATTGACGTGGGGGAAGCTGAACCACGGACTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS CCA 90 bp AGTTCTAGAAGTTCCCATGGGGCTTTCATGTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATTGTTACCTGCAGGTTCCGGGTGATA +
Preference number: 5 (lower is better)
Translates to: SSRSSHGAFMLSRYA*RSANRIVTCRFRVI
Trigger: TATCACCCGGAACCTGCAGGTAACAATTCTGTTTGCGGACCTCCACGCATACCTGGATAACATGAAAGCCCCATGGGAACTTCTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675785.1
CDS-3UTR CAA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCAGTGGTTTGCCCGTGGTaGCCGTTCCCCAGTAAATTT +
Preference number: 5 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSVVCPW*PFPSKF
Trigger: AAATTTACTGGGGAACGGCAACCACGGGCAAACCAC...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCGGTCCGCAAACAGAATaGTTACCTCACACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGGPQTE*LPHTLP
Trigger: AGGCAGGGTGTGAGGTAACAATTCTGTTTGCGGACC...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTAGAAGTCATATCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: LHILLPIKEINLGLLEVISAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...TATGACTTCTAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLSAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAATCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: FFTSSFRSRRSILDSSSESAPAF*ESCCVT
Trigger: GGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGA...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCTCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PQQQSPFPGPRKLCRFCFSDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...GAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGGGTGATGGATGGAGCAGACTGAAGAGACAGCAGATGACTCAGTGGTGGAAGTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: MGDGWSRLKRQQMTQWWKSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...CTTCCACCACTGAGTCATCTGCTGTCTCTTCAGTCTGCTCCATCCATCACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGACCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SILDSSSEELILLPVNPGPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAACCATTGGCTTCTGCTTaGAGGGATCTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: FFTSSFRSRRSILDSSSEPLASA*RDLGRQ
Trigger: CTGCCTACCCAGATCCCTCAAAGCAGAAGCCAATGG...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTACAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAACAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGSGSEF*AGPLAI
Trigger: AATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGA...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PGPRKLCRFCFHPISHLVTFFLG*SSSSGW
Trigger: CCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...TACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCTTCCCTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: WESCQPLGRPLGSLFSLPSKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...GGGAAGGGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTTATCCCTTCTATAGAAGCACACAGAAGCATGCCTTGGGACTCGACTCCTCTCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG +
Preference number: 5 (lower is better)
Translates to: FIPSIEAHRSMPWDSTPLSLVMK*VCFHCA
Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...GAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATAGAAGGGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCCAGAGTAAGCAGACATaGGGAAAGTTGCCAACCACT +
Preference number: 5 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPQSKQT*GKLPTT
Trigger: AGTGGTTGGCAACTTTCCCAATGTCTGCTTACTCTG...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AACTCTATAAGGAAAAGGATCCATGTCAACAAACTCATTGACAGCATTCCTAGCCCTTGGCCCAGGGGTTaGAGACCTGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NSIRKRIHVNKLIDSIPSPWPRG*RPAWAT
Trigger: TGTTGCCCAGGCAGGTCTCAAACCCCTGGGCCAAGG...GCTAGGAATGCTGTCAATGAGTTTGTTGACATGGATCCTTTTCCTTATAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp TCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGGTGGTTTGCCCGTGGTaGCCGTTCCCCAGTAAATTT +
Preference number: 5 (lower is better)
Translates to: SFRSRRSILDSSSEELILVVCPW*PFPSKF
Trigger: AAATTTACTGGGGAACGGCAACCACGGGCAAACCAC...CAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AACTGGGCTATTAGGAAAGGAGTAAATCCAACAGGTGCGGGAGCAGCTTCCTGGAGAAGTCTGCAATCTTaGACATGGGCACAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: NWAIRKGVNPTGAGAASWRSLQS*TWAQSK
Trigger: CTTACTTTGTGCCCATGTCAAAGATTGCAGACTTCT...CCAGGAAGCTGCTCCCGCACCTGTTGGATTTACTCCTTTCCTAATAGCCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp GTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCGGACTTAAGGGGTCCGCAAACAGAATaGTTACCTCACACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: VLFPPHFSSRRITNSDLRGPQTE*LPHTLP
Trigger: AGGCAGGGTGTGAGGTAACAATTCTGTTTGCGGACC...CCTTAAGTCCGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616261.2
CDS-3UTR CAA 90 bp GAGAGTGTTACCGGACTTAAGGGGAAAAAGGACATGCTTGATGAAGGACAGAACGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: ESVTGLKGKKDMLDEGQNVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...GTTCTGTCCTTCATCAAGCATGTCCTTTTTCCCCTTAAGTCCGGTAACACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAAATCCCACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTAGTGCCTTTGATGAACTaGAGCTTCTCCAAGGGCACA +
Preference number: 5 (lower is better)
Translates to: SNPTVSCWGEAVISLVQVVPLMN*SFSKGT
Trigger: TGTGCCCTTGGAGAAGCTCAAGTTCATCAAAGGCAC...TACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGTGGGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCATTCATCAGATGGACCCGTTTaGAATAGCCAAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LMEKYPTLYEDRITLCHSSDGPV*NSQVQG
Trigger: TCCCTGCACTTGGCTATTCAAAACGGGTCCATCTGA...TGAATGGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GATGCCTTATGGAGAAGTACCCCACCCTCTATGAAGACAGAATCACTCTCTGCCTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: DALWRSTPPSMKTESLSASRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...GGCAGAGAGTGATTCTGTCTTCATAGAGGGTGGGGTACTTCTCCATAAGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVTFFLG*SSSSGW
Trigger: CCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PQQQSPFPGPRKLCRFCFSKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...GAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCCACTCCTCAGAAATTTaGAAGTCAGCCTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: MKDRTPLFSTFPGSQKAFHSSEI*KSACNF
Trigger: GAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTG...GAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: ILDSSSEELILLPVNPGTEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS CCA 90 bp CACAAAGCTATCAATGCCAATATCTTAGCATTACGCACAAGTGGATaGCCAACTAAGAGCCAGGCCCATGCACATAGAAGGAAACTGGGA +
Preference number: 5 (lower is better)
Translates to: HKAINANILALRTSG*PTKSQAHAHRRKLG
Trigger: TCCCAGTTTCCTTCTATGTGCATGGGCCTGGCTCTTAGTTGGCCATCCACTTGTGCGTAATGCTAAGATATTGGCATTGATAGCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS-3UTR CAA 90 bp ACAGTTTCCTGTTGGGGAGAAGCTGTAATTAGCCTAGTCCAGGTACCAGATCCCAGAAGTCTGCAATCTTaGACATGGGCACAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: TVSCWGEAVISLVQVPDPRSLQS*TWAQSK
Trigger: CTTACTTTGTGCCCATGTCAAAGATTGCAGACTTCT...GGGATCTGGTACCTGGACTAGGCTAATTACAGCTTCTCCCCAACAGGAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373477.9
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: PQQQSPFPGPRKLCRFCFSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...GAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGAGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: DSSSEELILLPVNPGTIGGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AACCTCAGCAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: NLSSKVLFQVHVSCVGFVGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...AACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTGCTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACCAGGGCCTTTGGCCATaGGCTTCTGCTTTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDQGLWP*ASALRD
Trigger: ATCCCTCAAAGCAGAAGCCAATGGCCAAAGGCCCTG...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTTTCCCGGATTGGATCCAGCAACTTGTTCAGTGCGACTTCAACAGAATTCTTCACTTTCTTCTTGGGCTaGAGCTCCTCATCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: FSRIGSSNLFSATSTEFFTFFLG*SSSSGW
Trigger: CCAACCAGATGAGGAGCTCAAGCCCAAGAAGAAAGT...GAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG +
Preference number: 5 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQSLVMK*VCFHCA
Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAGAAATGGAGCCCAGCTaGGTCATGAAGTTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLEMEPS*VMKLVC
Trigger: GCAAACCAACTTCATGACCAAGCTGGGCTCCATTTC...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CAGCAAAGTCCTTTTCCAGGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCGAGGACCTCTTGTGGTaGAAAATGAGAATATGCTCA +
Preference number: 5 (lower is better)
Translates to: QQSPFPGPRKLCRFCFHPEDLLW*KMRICS
Trigger: TGAGCATATTCTCATTTTCAACCACAAGAGGTCCTC...GGGGTGGAAACAAAACCTACACAGCTTACGTGGACCTGGAAAAGGACTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS GCA 90 bp AGGGGTATTAAACTTTTCCCGGATTGGATCCAGCAACTTGTTCAGTaGGACTTCAACAGAATTCTTCAGGTCTCCAGGATGTACAACCTG +
Preference number: 5 (lower is better)
Translates to: RGIKLFPDWIQQLVQ*DFNRILQVSRMYNL
Trigger: CAGGTTGTACATCCTGGAGACCTGAAGAATTCTGTTGAAGTCGCACTGAACAAGTTGCTGGATCCAATCCGGGAAAAGTTTAATACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487404.5
CDS-3UTR CAA 90 bp GGTCCACGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGAAGAAGTCTGCAATCTTaGACATGGGCACAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: GPRKLCRFCFHPISHLVGRSLQS*TWAQSK
Trigger: CTTACTTTGTGCCCATGTCAAAGATTGCAGACTTCT...TCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCGGTCCGCAAACAGAATaGTTACCTCACACCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FPPHFSSRRITNSIRKRIGPQTE*LPHTLP
Trigger: AGGCAGGGTGTGAGGTAACAATTCTGTTTGCGGACC...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AAAAGGACATGCTTGATGAAGGACAGAACCCCATTGTTCTCCACATTTCCTGGCTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: KRTCLMKDRTPLFSTFPGSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...GCCAGGAAATGTGGAGAACAATGGGGTTCTGTCCTTCATCAAGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGATCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: DSSSEELILLPVNPGTIGSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SSFRSRRSILDSSSEELISRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...AATGAGCTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGATCAAGGAGATCAATCTaGGACTCCTCTTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: DSSSEELILLPVNPGTIGSRRSI*DSSSEE
Trigger: CTCTTCAGAAGAGGAGTCCAAGATTGATCTCCTTGA...TCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616261.2
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTCTTCACATCCTCCTTCCGATCAAGGAGATCAATCTTGGACTCCTCTTCTGAATCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: FFTSSFRSRRSILDSSSESKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...TTCAGAAGAGGAGTCCAAGATTGATCTCCTTGATCGGAAGGAGGATGTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674629.1
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGACATTGGGAAAGTTGCCAACCACTTGGTAGACCACTAGGTTCTCTGTTTTCCCACTCCTCAGAAATTTaGAAGTCAGCCTGCAACTTC +
Preference number: 5 (lower is better)
Translates to: RHWESCQPLGRPLGSLFSHSSEI*KSACNF
Trigger: GAAGTTGCAGGCTGACTTCAAAATTTCTGAGGAGTG...GGAAAACAGAGAACCTAGTGGTCTACCAAGTGGTTGGCAACTTTCCCAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp AGAACCCCATTGTTCTCCACATTTCCTGGCTCACAGAAGGCCTTCTTCAGTTTTCATGGGCTCTGGAGTTaGAAAGATCTGGGTACTAAT +
Preference number: 5 (lower is better)
Translates to: RTPLFSTFPGSQKAFFSFHGLWS*KDLGTN
Trigger: ATTAGTACCCAGATCTTTCAAACTCCAGAGCCCATG...AAAACTGAAGAAGGCCTTCTGTGAGCCAGGAAATGTGGAGAACAATGGGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS-3UTR CAA 90 bp ATGCTGGGAAATGCGAACCAAATGCTCTGTGAAAGGACAGTAGTTCCAACTGGTGCTTCAGGGGAAGGCTaGTGGCTTATATCTATTTTG +
Preference number: 5 (lower is better)
Translates to: MLGNANQMLCERTVVPTGASGEG*WLISIL
Trigger: CAAAATAGATATAAGCCACAAGCCTTCCCCTGAAGC...ACCAGTTGGAACTACTGTCCTTTCACAGAGCATTTGGTTCGCATTTCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS CCA 90 bp TTCATTAACAGTACTTGTACGATAAGTCCTTCATGCATCAACTTTTaGCATCAGCAAGGAAGAGGCACGTGTTCTCAGAGCTTCCACCTG +
Preference number: 5 (lower is better)
Translates to: FINSTCTISPSCINF*HQQGRGTCSQSFHL
Trigger: CAGGTGGAAGCTCTGAGAACACGTGCCTCTTCCTTGCTGATGCCAAAAGTTGATGCATGAAGGACTTATCGTACAAGTACTGTTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS-3UTR CAA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLSEELI*LPVNPG
Trigger: TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGA...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TTTCCACCCCATTTCTCATCTCGTAGGATCACAAACTCTATAAGGAAAAGGATCAGCTTGGTCATGAAGTaGGTTTGCTTCCACTGTGCG +
Preference number: 5 (lower is better)
Translates to: FPPHFSSRRITNSIRKRISLVMK*VCFHCA
Trigger: CGCACAGTGGAAGCAAACCAACTTCATGACCAAGCT...GATCCTTTTCCTTATAGAGTTTGTGATCCTACGAGATGAGAAATGGGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGCAGCTGCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTAGCTTCAGGGGAAGGCTaGTGGCTTATATCTATTTTG +
Preference number: 5 (lower is better)
Translates to: RSCLDNSKKTWAPVFFQLASGEG*WLISIL
Trigger: CAAAATAGATATAAGCCACAAGCCTTCCCCTGAAGC...TAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGCAGCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATGTCAACAAACTCATaGACAGCATTCCTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: ILDSSSEELILLPVNPGTMSTNS*TAFLAH
Trigger: GTGAGCTAGGAATGCTGTCAATGAGTTTGTTGACAT...GGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAACCATAGGATTCAGAAGTCTGCAATCTTaGACATGGGCACAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: SSSEELILLPVNPGTIGFRSLQS*TWAQSK
Trigger: CTTACTTTGTGCCCATGTCAAAGATTGCAGACTTCT...GAATCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp TCAATCTTGGACTCCTCTTCTGAAGAGCTCATTTTGCTGCCTGTTAATCCTGGAAGAAGTCTGCAATCTTaGACATGGGCACAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: SILDSSSEELILLPVNPGRSLQS*TWAQSK
Trigger: CTTACTTTGTGCCCATGTCAAAGATTGCAGACTTCT...TCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGAGTCCAAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS-3UTR CAA 90 bp GCTTGGATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACGGAAAAAGGACATGCTaGATGAAGGACAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: AWITPRKPGHQYFSNYKDGKRTC*MKDRTP
Trigger: TGGGGTTCTGTCCTTCATCAAGCATGTCCTTTTTCC...GTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTATCCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp ATAACTCCAAGAAAACCTGGGCACCAGTATTTTTCCAATTATAAGGACTGTGGCTCGAAGACTTTCTTCTaGGGCTTGAGCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: ITPRKPGHQYFSNYKDCGSKTFF*GLSSSS
Trigger: AGATGAGGAGCTCAAGCCCAAGAAGAAAGTCTTCGA...GCCACAGTCCTTATAATTGGAAAAATACTGGTGCCCAGGTTTTCTTGGAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS-3UTR CAA 90 bp CGTAAGCTGTGTAGGTTTTGTTTCCACCCCATTTCTCATCTCGTAGGATCACAAATGTCAACAAACTCATaGACAGCATTCCTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RKLCRFCFHPISHLVGSQMSTNS*TAFLAH
Trigger: GTGAGCTAGGAATGCTGTCAATGAGTTTGTTGACAT...TTGTGATCCTACGAGATGAGAAATGGGGTGGAAACAAAACCTACACAGCTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481895.6
ENST00000674654.1
ENST00000676297.1
CDS TCA 90 bp GGAAAGCAGACACTCACCTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAATACTCTTCA +
Preference number: 5 (lower is better)
Translates to: GKQTLTFSAKVKIFL*SMPPNWASTFKYSS
Trigger: TGAAGAGTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGGTGAGTGTCTGCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS TCA 90 bp ACTTCTTATCTTCTATCCTCAGTGTTCTCATCTTCTCTGCAAAGGTaGAAATCTTTCTCTGATCAATGCCTCCAAATTGGGCATCTACTT +
Preference number: 5 (lower is better)
Translates to: TSYLLSSVFSSSLQR*KSFSDQCLQIGHLL
Trigger: AAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGATGAGAACACTGAGGATAGAAGATAAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466052.1
ENST00000616261.2
CDS TCA 90 bp ATCCTCAGTGTTCTCATCTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAATACTCTTCA +
Preference number: 5 (lower is better)
Translates to: ILSVLIFSAKVKIFL*SMPPNWASTFKYSS
Trigger: TGAAGAGTATTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGATGAGAACACTGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466052.1
ENST00000616261.2
CDS CCA 72 bp GCTTCCCCCGCTCAGCCCGGCACCAGAGCCCCTTCCTaGGTCACCGTCGCCGCCGCGTGCCGGGAACTGTCA +
Preference number: 6 (lower is better)
Translates to: ASPAQPGTRAPS*VTVAAACRELS
Trigger: TGACAGTTCCCGGCACGCGGCGGCGACGGTGACCCAGGAAGGGGCTCTGGTGCCGGGCTGAGCGGGGGAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000674629.1
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS CCA 72 bp TGGCGGCCGGGAAGATGCGCTCCTCACTTCCAAGACTaGGCGGCCGGGCAGAGGGGCTCCTCACATCCCAGA +
Preference number: 6 (lower is better)
Translates to: WRPGRCAPHFQD*AAGQRGSSHPR
Trigger: TCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTTGGAAGTGAGGAGCGCATCTTCCCGGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676297.1
CDS TCA 72 bp GAGGCCAAAGCAATCCGGGCCTTTACACAGGGGCCCTaGTGGGATTTAGGGCATCCTCAGTACCAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: EAKAIRAFTQGP*WDLGHPQYQSP
Trigger: GGGGCTCTGGTACTGAGGATGCCCTAAATCCCATCAGGGCCCCTGTGTAAAGGCCCGGATTGCTTTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp GGAGCAGAGCCTGCCGGAGGGTCCAGAGGTTCAACCTaGCGGTTTATCCCTTCTCTGGGAAGACACAGGACA +
Preference number: 6 (lower is better)
Translates to: GAEPAGGSRGST*RFIPSLGRHRT
Trigger: TGTCCTGTGTCTTCCCAGAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACCCTCCGGCAGGCTCTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS GCA 72 bp TGCAGTCCGGGGTATAAGAGGCCACTCAGCAAAGGGTaGTCCACCTGCTTTACCACCTCAGCTCCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: CSPGYKRPLSKG*STCFTTSAPAF
Trigger: GAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGGCCTCTTATACCCCGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373477.9
ENST00000470377.1
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS CAA 90 bp CGGATATCCAGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATTGGCTCTGGGAATGAGAAGAACCCC +
Preference number: 6 (lower is better)
Translates to: RISSRDGMTSSGSEF*AGPLAIGSGNEKNP
Trigger: GGGGTTCTTCTCATTCCCAGAGCCAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCTGGATATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS TCA 72 bp GCTTCCACCTGGTGTGTGGAAGGACATCATATGGGCTaGTTCCCTACTCTTCCTGGCCTCCCCAGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: ASTWCVEGHHMG*FPTLPGLPRSC
Trigger: ACAGGACCTGGGGAGGCCAGGAAGAGTAGGGAATCAGCCCATATGATGTCCTTCCACACACCAGGTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CAA 72 bp TGCTCCACCTGCTTTACCACCTCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACCACGGAGGAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: CSTCFTTSAPAF*ESCCVTTEESL
Trigger: CAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS CAA 72 bp AGCCGGGATGGGATGACCTCCTCTGGTTCTGAATTCTaGGCAGGGCCTTTGGCCATTGGCTCTGGGAATGAG +
Preference number: 6 (lower is better)
Translates to: SRDGMTSSGSEF*AGPLAIGSGNE
Trigger: CTCATTCCCAGAGCCAATGGCCAAAGGCCCTGCCAAGAATTCAGAACCAGAGGAGGTCATCCCATCCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS GCA 72 bp GGGTATAAGAGGCCACTCAGCAAAGGGTGCTCCACCTaGTTTACCACCTCAGCTCCAGCCTTCTTGGAATCG +
Preference number: 6 (lower is better)
Translates to: GYKRPLSKGCST*FTTSAPAFLES
Trigger: CGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTTGCTGAGTGGCCTCTTATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373477.9
ENST00000470377.1
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS CAA 90 bp AGCAAAGGGTGCTCCACCTGCTTTACCACCTCAGCTCCAGCCTTCTaGGAATCGTGCTGTGTGACCACGGAGGAGAGTCTGTACACATCT +
Preference number: 6 (lower is better)
Translates to: SKGCSTCFTTSAPAF*ESCCVTTEESLYTS
Trigger: AGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCAGGTGGAGCACCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS TCA 72 bp CCACCTCAGCTCCAGCCTTCTTGGAATCGTGCTGTGTaGCCACGGAGGAGAGTCTGTACACATCTAGTGTGT +
Preference number: 6 (lower is better)
Translates to: PPQLQPSWNRAV*PRRRVCTHLVC
Trigger: ACACACTAGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS CAA 90 bp GAGGAAGAGGATCATCGTCCATTAGAGAAGCAGCCTGGTGAACTCTaGGATTCCGGAAAGGAGCATCCACTCCTTACAGAGGCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: EEEDHRPLEKQPGEL*DSGKEHPLLTEAPG
Trigger: TCCAGGGGCCTCTGTAAGGAGTGGATGCTCCTTTCCGGAATCCAAGAGTTCACCAGGCTGCTTCTCTAATGGACGATGATCCTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS TCA 72 bp CTTTGGCCATTGGCTCTGGGAATGAGAAGAACCCCATaGGGTAGAATTCTTCCCTGTGGCAGGTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LWPLALGMRRTP*GRILPCGRSAA
Trigger: AGCAGCTGACCTGCCACAGGGAAGAATTCTACCTCATGGGGTTCTTCTCATTCCCAGAGCCAATGGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS GCA 72 bp TGCTTTACCACCTCAGCTCCAGCCTTCTTGGAATCGTaGTGTGTGACCACGGAGGAGAGTCTGTACACATCT +
Preference number: 6 (lower is better)
Translates to: CFTTSAPAFLES*CVTTEESLYTS
Trigger: AGATGTGTACAGACTCTCCTCCGTGGTCACACAGCACGATTCCAAGAAGGCTGGAGCTGAGGTGGTAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674629.1
ENST00000675785.1
ENST00000676297.1
CDS CCA 72 bp GTCCTCACTCACATAGAAGCACACAGAAGCATGCCTTaGGACTCGACTCCTCTCATCTTCTGGGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: VLTHIEAHRSMP*DSTPLIFWGFR
Trigger: CCTGAAACCCCAGAAGATGAGAGGAGTCGAGTCCCAAGGCATGCTTCTGTGTGCTTCTATGTGAGTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp GGTCCAGAGGTTCAACCTGGCGGTTTATCCCTTCTCTaGGAAGACACAGGACAAGAGAAGAGTGAGGCTATG +
Preference number: 6 (lower is better)
Translates to: GPEVQPGGLSLL*EDTGQEKSEAM
Trigger: CATAGCCTCACTCTTCTCTTGTCCTGTGTCTTCCCAGAGAAGGGATAAACCGCCAGGTTGAACCTCTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CAA 90 bp AGAGGTGGAAGGATCTCTAAGCCATCTGATGCAGGAGCACCAGCATaGATCTCAGGGTGGTTTTGGTGGTTGGGGTACACAGTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RGGRISKPSDAGAPA*ISGWFWWLGYTVRS
Trigger: GCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGGCTTAGAGATCCTTCCACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp GATGCAGGAGCACCAGCATTGATCTCAGGGTGGTTTTaGTGGTTGGGGTACACAGTGAGAAGCAAATCCATG +
Preference number: 6 (lower is better)
Translates to: DAGAPALISGWF*WLGYTVRSKSM
Trigger: CATGGATTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp CCATCTGATGCAGGAGCACCAGCATTGATCTCAGGGTaGTTTTGGTGGTTGGGGTACACAGTGAGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: PSDAGAPALISG*FWWLGYTVRSK
Trigger: TTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CAA 72 bp GGAGCACCAGCATTGATCTCAGGGTGGTTTTGGTGGTaGGGGTACACAGTGAGAAGCAAATCCATGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GAPALISGWFWW*GYTVRSKSMSK
Trigger: CTTCGACATGGATTTGCTTCTCACTGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CAA 72 bp AGGATCTCTAAGCCATCTGATGCAGGAGCACCAGCATaGATCTCAGGGTGGTTTTGGTGGTTGGGGTACACA +
Preference number: 6 (lower is better)
Translates to: RISKPSDAGAPA*ISGWFWWLGYT
Trigger: TGTGTACCCCAACCACCAAAACCACCCTGAGATCAATGCTGGTGCTCCTGCATCAGATGGCTTAGAGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS GCA 72 bp TCCTCAGTACCAGAGCCCCAGGAGGTCCTCTTATCTTaGTACATCCCTGCATATCACCAGGGTTACATTAAC +
Preference number: 6 (lower is better)
Translates to: SSVPEPQEVLLS*YIPAYHQGYIN
Trigger: GTTAATGTAACCCTGGTGATATGCAGGGATGTAGCAAGATAAGAGGACCTCCTGGGGCTCTGGTACTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp AGTTCCCATGGGGCTTTCATGTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATTGTTACCTCACACCCT +
Preference number: 6 (lower is better)
Translates to: SSHGAFMLSRYA*RSANRIVTSHP
Trigger: AGGGTGTGAGGTAACAATTCTGTTTGCGGACCTCCACGCATACCTGGATAACATGAAAGCCCCATGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000676297.1
CDS CCA 72 bp AGTTCCCATGGGGCTTTCATGTTATCCAGGTATGCGTaGAGGTCCGCAAACAGAATTGTTACCTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SSHGAFMLSRYA*RSANRIVTCRF
Trigger: GAACCTGCAGGTAACAATTCTGTTTGCGGACCTCCACGCATACCTGGATAACATGAAAGCCCCATGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675785.1
CDS CAA 72 bp GTTGATATTACCCTAAGCCCCAGCATTTGTGTCTGGTaGATGGTACCCAAAGCCTCCGCGTCTATCACCTTG +
Preference number: 6 (lower is better)
Translates to: VDITLSPSICVW*MVPKASASITL
Trigger: CAAGGTGATAGACGCGGAGGCTTTGGGTACCATCAACCAGACACAAATGCTGGGGCTTAGGGTAATATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472692.1
CDS GCA 72 bp GAGCTTCTCCAAGGGCACACCAATGCTCTCCAGCATTaGTTTGATCACATTCTCATAGTAACTGACTCGGAG +
Preference number: 6 (lower is better)
Translates to: ELLQGHTNALQH*FDHILIVTDSE
Trigger: CTCCGAGTCAGTTACTATGAGAATGTGATCAAAGCAATGCTGGAGAGCATTGGTGTGCCCTTGGAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373477.9
ENST00000481895.6
ENST00000616261.2
ENST00000674654.1
ENST00000675785.1
ENST00000676297.1
CDS CCA 72 bp ATCAATGCCAATATCTTAGCATTACGCACAAGTGGATaGCCAACTAAGAGCCAGGCCCATGCACATAGAAGG +
Preference number: 6 (lower is better)
Translates to: INANILALRTSG*PTKSQAHAHRR
Trigger: CCTTCTATGTGCATGGGCCTGGCTCTTAGTTGGCCATCCACTTGTGCGTAATGCTAAGATATTGGCATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS TCA 72 bp AATGTCAGTGCCTCACCTTGCTCATCCTTTACCATGTaGCAAGGAAAACAACAGCATGTGTCAGTGGAGATC +
Preference number: 6 (lower is better)
Translates to: NVSASPCSSFTM*QGKQQHVSVEI
Trigger: GATCTCCACTGACACATGCTGTTGTTTTCCTTGTCACATGGTAAAGGATGAGCAAGGTGAGGCACTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472692.1
CDS CAA 72 bp CTCAGCTGGCAACTTACCTCTTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGAACCATAGGATTCATC +
Preference number: 6 (lower is better)
Translates to: LSWQLTSSEELI*LPVNPGTIGFI
Trigger: GATGAATCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGTAAGTTGCCAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470377.1
CDS CAA 72 bp CAGTACTTGTACGATAAGTCCTTCATGCATCAACTTTaGGCATCAGCAAGGAAGAGGCACGTGTTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: QYLYDKSFMHQL*ASARKRHVFSE
Trigger: CTCTGAGAACACGTGCCTCTTCCTTGCTGATGCCAAAAGTTGATGCATGAAGGACTTATCGTACAAGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CAA 90 bp AATTCAAGTCTCAGCTGGCAACTTACCTCTTCTGAAGAGCTCATTTaGCTGCCTGTTAATCCTGGAACCATAGGATTCATCAGATGGACC +
Preference number: 6 (lower is better)
Translates to: NSSLSWQLTSSEELI*LPVNPGTIGFIRWT
Trigger: GGTCCATCTGATGAATCCTATGGTTCCAGGATTAACAGGCAGCAAAATGAGCTCTTCAGAAGAGGTAAGTTGCCAGCTGAGACTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470377.1
CDS TCA 72 bp CGTAGCGAGGACTTTATAGACATCAAAACTGGGATTTaGATCCCTGCTCCACTCCTTACTAGTAGTAAGACT +
Preference number: 6 (lower is better)
Translates to: RSEDFIDIKTGI*IPAPLLTSSKT
Trigger: AGTCTTACTACTAGTAAGGAGTGGAGCAGGGATTCAAATCCCAGTTTTGATGTCTATAAAGTCCTCGCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS CCA 72 bp GCACATCAAAGAACGCAAATAACTGATAAGATATTGTaGAAAGCTATAGCCGCAGTTCCCAGGAATTTGCCC +
Preference number: 6 (lower is better)
Translates to: AHQRTQITDKIL*KAIAAVPRNLP
Trigger: GGGCAAATTCCTGGGAACTGCGGCTATAGCTTTCCACAATATCTTATCAGTTATTTGCGTTCTTTGATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472692.1
CDS CAA 72 bp CCAGGTCACTGTTCTTTTCAGTCCTCAATCTCTCCATaGAGGCTGAAGATTTCTAAATTCAAGTCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PGHCSFQSSISP*RLKISKFKSQL
Trigger: CAGCTGAGACTTGAATTTAGAAATCTTCAGCCTCAATGGAGAGATTGAGGACTGAAAAGAACAGTGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470377.1
CDS CAA 72 bp CCAGCACATCAAAGAACGCAAATAACTGATAAGATATaGTGGAAAGCTATAGCCGCAGTTCCCAGGAATTTG +
Preference number: 6 (lower is better)
Translates to: PAHQRTQITDKI*WKAIAAVPRNL
Trigger: CAAATTCCTGGGAACTGCGGCTATAGCTTTCCACAATATCTTATCAGTTATTTGCGTTCTTTGATGTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472692.1
CDS CAA 72 bp ATCACCAGGGTTACATTAACCCAGGCTATACCAAAATaGTGTGTCAAGATACCAAAATCTGTGTTTCTAGGG +
Preference number: 6 (lower is better)
Translates to: ITRVTLTQAIPK*CVKIPKSVFLG
Trigger: CCCTAGAAACACAGATTTTGGTATCTTGACACACAATTTTGGTATAGCCTGGGTTAATGTAACCCTGGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1
CDS TCA 72 bp GTAAGATTTAGTGTAGAATCCCCAGAGTCTAAACACTaGGTTGTAACTTCTTTAATACTGGGTTGGCAACCT +
Preference number: 6 (lower is better)
Translates to: VRFSVESPESKH*VVTSLILGWQP
Trigger: AGGTTGCCAACCCAGTATTAAAGAAGTTACAACTCAGTGTTTAGACTCTGGGGATTCTACACTAAATCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469100.5
CDS TCA 72 bp ACACTCACCTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAA +
Preference number: 6 (lower is better)
Translates to: TLTFSAKVKIFL*SMPPNWASTFK
Trigger: TTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGGTGAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481895.6
CDS TCA 72 bp GTTCTCATCTTCTCTGCAAAGGTGAAAATCTTTCTCTaGTCAATGCCTCCAAATTGGGCATCTACTTTTAAA +
Preference number: 6 (lower is better)
Translates to: VLIFSAKVKIFL*SMPPNWASTFK
Trigger: TTTAAAAGTAGATGCCCAATTTGGAGGCATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGATGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466052.1
ENST00000616261.2
CDS TCA 72 bp TCCTTACTAGTAGTAAGACTTGGGTATGTACTGGTTTaGGCCCTCCATTTCTATTTTAACAAAATTAACTGT +
Preference number: 6 (lower is better)
Translates to: SLLVVRLGYVLV*ALHFYFNKINC
Trigger: ACAGTTAATTTTGTTAAAATAGAAATGGAGGGCTCAAACCAGTACATACCCAAGTCTTACTACTAGTAAGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490826.1