RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YAF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000015153

Ensembl transcript IDs: ENST00000327791.8, ENST00000380790.4, ENST00000534854.7, ENST00000541702.2, ENST00000546726.5, ENST00000546782.1, ENST00000546972.5, ENST00000547254.5, ENST00000547351.5, ENST00000547622.5, ENST00000547724.1, ENST00000548661.5, ENST00000548917.1, ENST00000551268.5, ENST00000552109.5, ENST00000552928.5, ENST00000555248.2

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCATGGTaGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACAGAACAC +
Preference number: 1 (lower is better)
Translates to: QGAHLMRASCCFNSW*KADGELRRAKRTEH
Trigger: GTGTTCTGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 90 bp GATGAGGGCCTCATGCTGCTTCAACTCATGGTGGAAAGCAGATGGTaGACTGAGGAGGGCAAAGAGAACAGAACACAAGAAGCATCCTCA +
Preference number: 1 (lower is better)
Translates to: DEGLMLLQLMVESRW*TEEGKENRTQEASS
Trigger: TGAGGATGCTTCTTGTGTTCTGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCAGCATGAGGCCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 90 bp AGATTTCTGGTGAGTTGCCCAGAGCCTCTTCAGTTTCAATCCAAATaGCAATGCTTCTCTGAGTCCTCCTCAAGTAATGTTTCCACCACT +
Preference number: 1 (lower is better)
Translates to: RFLVSCPEPLQFQSK*QCFSESSSSNVSTT
Trigger: AGTGGTGGAAACATTACTTGAGGAGGACTCAGAGAAGCATTGTCATTTGGATTGAAACTGAAGAGGCTCTGGGCAACTCACCAGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551268.5
ENST00000555248.2
3UTR TCA 90 bp GGCCTAACATTTGGCAATGAGGCAGAATCAGTTCAAAGGTCAGTCTaGCCCAAAGGATTCAAATCCCATCTGTGCGTCACACAAACAAAT +
Preference number: 1 (lower is better)
Translates to: GLTFGNEAESVQRSV*PKGFKSHLCVTQTN
Trigger: ATTTGTTTGTGTGACGCACAGATGGGATTTGAATCCTTTGGGTCAGACTGACCTTTGAACTGATTCTGCCTCATTGCCAAATGTTAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 90 bp GGTGGTGAATATTACAATGAAGATAGCAATTTGGTGCCACTGCTTTaGTTCATGCTAAGGTGCTGGCAGTTTTACCCATCACTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: GGEYYNEDSNLVPLL*FMLRCWQFYPSLPL
Trigger: CAGAGGCAGTGATGGGTAAAACTGCCAGCACCTTAGCATGAATCAAAGCAGTGGCACCAAATTGCTATCTTCATTGTAATATTCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CCA 90 bp AGAGAAGAGAATTCAGAGAGAGGAAGGAAGAAGCTGAGAGGGTCGTaGTGTAGAACACTTACTTTCAGGAACACAGTGTCCCTTAGATTT +
Preference number: 1 (lower is better)
Translates to: REENSERGRKKLRGS*CRTLTFRNTVSLRF
Trigger: AAATCTAAGGGACACTGTGTTCCTGAAAGTAAGTGTTCTACACCACGACCCTCTCAGCTTCTTCCTTCCTCTCTCTGAATTCTCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 90 bp CCAGAACTAACTGAGCCTCATGAGAAAGCCTTTAATCCATCTCAATaGCCTAATCACCTCTTAAAGGCACCACCTACCAACACAATCAAA +
Preference number: 1 (lower is better)
Translates to: PELTEPHEKAFNPSQ*PNHLLKAPPTNTIK
Trigger: TTTGATTGTGTTGGTAGGTGGTGCCTTTAAGAGGTGATTAGGTCATTGAGATGGATTAAAGGCTTTCTCATGAGGCTCAGTTAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 90 bp TTTGAAATACATGCCATGAATGTAACTTCGTTCTCTAGAAAGACATaGCCTACCATGGATATAGCCAAAGGAAATGGGCTTCTGTTGCAT +
Preference number: 1 (lower is better)
Translates to: FEIHAMNVTSFSRKT*PTMDIAKGNGLLLH
Trigger: ATGCAACAGAAGCCCATTTCCTTTGGCTATATCCATGGTAGGTCATGTCTTTCTAGAGAACGAAGTTACATTCATGGCATGTATTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR GCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTGGGCTCAAAATATCTaGCTGCTTCAGCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLWAQNI*LLQPKV
Trigger: CACTTTGGGCTGAAGCAGGCAGATATTTTGAGCCCA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTGGCGGAAGCCTCAGTaGAAACGAAAACTTCTAGAC +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLWRKPQ*KRKLLD
Trigger: GTCTAGAAGTTTTCGTTTCCACTGAGGCTTCCGCCA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 2 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
3UTR-3UTR TCA 90 bp ATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATTGTTCCACCAAATGGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 2 (lower is better)
Translates to: MTQISRQRLEPAGLFHQMGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...CATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
3UTR-3UTR GCA 90 bp TGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTCAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 2 (lower is better)
Translates to: CPSVQHENLPDGHPLELPQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...AGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
3UTR-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCTGGGAGGTGGAGGTTaGAGTGAGCCGAGGTCACGC +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCALGGGG*SEPRSR
Trigger: GCGTGACCTCGGCTCACTGCAACCTCCACCTCCCAG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGTCTATGTAGAAAGATaGGTATCTTCCCACCTATGT +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLVYVER*VSSHLC
Trigger: ACATAGGTGGGAAGATACTCATCTTTCTACATAGAC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR TCA 90 bp CCTGGACATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGGTAACTTCCAAATGCTaGGCACTACTCCGATCCACA +
Preference number: 2 (lower is better)
Translates to: PGHSSLCVIRARAALTVLVTSKC*ALLRST
Trigger: TGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTAC...CAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCAGATTCATACTTCTATaGCCCTGGATAAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLRFILL*PWISLG
Trigger: TCCCAAACTTATCCAGGGCCATAGAAGTATGAATCT...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTCTGTTTATGGAATTTaGGTCTGTTTTCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLSVYGI*VCFPGV
Trigger: CACACCAGGAAAACAGACCCAAATTCCATAAACAGA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR TCA 90 bp GAAGCAGCACTAGATGCAGGCGGTGACTTTGTTTTCTCCTTAAAGTCTGTAATAGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 2 (lower is better)
Translates to: EAALDAGGDFVFSLKSVIGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...TATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR-3UTR TCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 2 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR CAA 90 bp AAGAGAATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACCAGGCTCTCTTCCTGTTATCTCAGT +
Preference number: 2 (lower is better)
Translates to: KRMTQISRQRLEPAG*FHQMVTRLSSCYLS
Trigger: ACTGAGATAACAGGAAGAGAGCCTGGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCATTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
3UTR-3UTR TCA 90 bp ACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAGGTTTCCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: TSLALLFSMRIFLMGIHWRFPVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGGAAACCT...CCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
3UTR-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCACATATCTGGTTAGCTaGTATTCCATTGAAAGTATC +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLTYLVS*YSIESI
Trigger: GATACTTTCAATGGAATACCAGCTAACCAGATATGT...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTTAAAGGAACATATCTaGTTAGCTGGTATTCCATTG +
Preference number: 2 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLLKEHI*LAGIPL
Trigger: CAATGGAATACCAGCTAACCAGATATGTTCCTTTAA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp GAGGCACTCACAATAACTTCAAACAATGTGGATTTTCAGGAACACAGTGTCCCTTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: EALTITSNNVDFQEHSVPCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...AGGGACACTGTGTTCCTGAAAATCCACATTGTTTGAAGTTATTGTGAGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551268.5
3UTR-3UTR CCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR CAA 90 bp GGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: GHPLELPEIGNFNGS*VLEALTITSNNVDL
Trigger: CAGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
3UTR-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTAGTTCGAGGCTGCAGTaGGCCTGGATGATGCCACTG +
Preference number: 2 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSSSRLQ*AWMMPL
Trigger: CAGTGGCATCATCCAGGCTCACTGCAGCCTCGAACT...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTACAGAGGCTGAGGCATaGGAATTGCTTGAACCTGGG +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCATEAEA*ELLEPG
Trigger: CCCAGGTTCAAGCAATTCTCATGCCTCAGCCTCTGT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTTGCAACCTCGAACTCTaGGGCTCAAGGGATCCTCCC +
Preference number: 2 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSCNLEL*GSRDPP
Trigger: GGGAGGATCCCTTGAGCCCCAGAGTTCGAGGTTGCA...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CAA 90 bp GGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: GHPLELPEIGNFNGS*VLEALTITSNNVDF
Trigger: AAAATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551268.5
3UTR CAA 90 bp AAATCATTAGCAAACTGCATCCTTCTGCTCTGCAGCTATCCAGTCTaGGCTTTAGTACTTGCCAACCTTACTCTGGAAATTACCCTGTTC +
Preference number: 2 (lower is better)
Translates to: KSLANCILLLCSYPV*ALVLANLTLEITLF
Trigger: GAACAGGGTAATTTCCAGAGTAAGGTTGGCAAGTACTAAAGCCAAGACTGGATAGCTGCAGAGCAGAAGGATGCAGTTTGCTAATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR GCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACATTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 2 (lower is better)
Translates to: CFNSWWKADGELRRAKRTFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp TACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: YSDPHFSILAWFSYGYSFCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...AAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAATCTTCAGATAGGCTaGGCACAGTGTCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCANLQIG*AQCLTP
Trigger: AGGAGTGAGACACTGTGCCCAGCCTATCTGAAGATT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACGAGGAAGGAAGAAGCTaGGAGGGTCGTGGTGTAGAA +
Preference number: 2 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNEEGRS*EGRGVE
Trigger: TTCTACACCACGACCCTCTCAGCTTCTTCCTTCCTC...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTGTTCAAAGGTCAGTCTaGCCCAAAGGATTCAAATCC +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAVQRSV*PKGFKS
Trigger: GGATTTGAATCCTTTGGGTCAGACTGACCTTTGAAC...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACATTAAAGGAACATATCTaGTTAGCTGGTATTCCATTG +
Preference number: 2 (lower is better)
Translates to: CFNSWWKADGELRRAKRTLKEHI*LAGIPL
Trigger: CAATGGAATACCAGCTAACCAGATATGTTCCTTTAA...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp CATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGATCTGCATTCACCTTGAATCTTaGGAAGCTCTTCAATTAAAG +
Preference number: 2 (lower is better)
Translates to: HSSLCVIRARAALTVLICIHLES*EALQLK
Trigger: CTTTAATTGAAGAGCTTCCCAAGATTCAAGGTGAAT...GCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
3UTR-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTTTCATGCTAAGGTGCTaGCAGTTTTACCCATCACTG +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAFMLRC*QFYPSL
Trigger: CAGTGATGGGTAAAACTGCCAGCACCTTAGCATGAA...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCTTCCTTTCAGGATACTaGGAAATGTGTAAACTGGCA +
Preference number: 2 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFFLSGY*EMCKLA
Trigger: TGCCAGTTTACACATTTCTCAGTATCCTGAAAGGAA...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR CAA 90 bp CTTGCAAGACAAACTACACATGTGCTTTCCCTTAACCACTGTACTTaGGTATACAGTAGAAGTGCTTTATGTGTAGTTCCCATTTGGTCA +
Preference number: 2 (lower is better)
Translates to: LARQTTHVLSLNHCT*VYSRSALCVVPIWS
Trigger: TGACCAAATGGGAACTACACATAAAGCACTTCTACTGTATACCAAAGTACAGTGGTTAAGGGAAAGCACATGTGTAGTTTGTCTTGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTTCTGCACCATCACAGTaGAAAAGGCAAATAACATCT +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCASAPSQ*KRQITS
Trigger: AGATGTTATTTGCCTTTTTCACTGTGATGGTGCAGA...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGAAATGTGGTACCTCTTaGCATAATCTGTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGKCGTS*HNLCIC
Trigger: GCAAATACACAGATTATGCCAAGAGGTACCACATTT...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGGAGAAATGTGTAAACTaGCAGCTGTGTCTGAAAATA +
Preference number: 2 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGEKCVN*QLCLKI
Trigger: TATTTTCAGACACAGCTGCCAGTTTACACATTTCTC...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGGCCCTGTTTTATAGATaGAAAGTAAGCTTGGGTAAT +
Preference number: 2 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGALFYR*KVSLGN
Trigger: ATTACCCAAGCTTACTTTCCATCTATAAAACAGGGC...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp GAAGCAGCACTAGATGCAGGCGGTGACTTTGTTTTCTCCTTAAAGTCTGTAATACACATTTTTCAATCTTaGCCTGGTTTTCTTATGGCT +
Preference number: 2 (lower is better)
Translates to: EAALDAGGDFVFSLKSVIHIFQS*PGFLMA
Trigger: AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTG...TATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR-3UTR CCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTAAGCTGAGAGGGTCGTaGTGTAGAACACTTACTTTC +
Preference number: 2 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSKLRGS*CRTLTF
Trigger: GAAAGTAAGTGTTCTACACCACGACCCTCTCAGCTT...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR TCA 90 bp AGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTACTTTAAATTCACCTTaGATCTTGGGAAGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: STTPIHIFQSWPGFLMAITLNSP*ILGSSS
Trigger: TGAAGAGCTTCCCAAGATTCAAGGTGAATTTAAAGT...AATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547351.5
3UTR-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCCTAACATTTGGCAATaGGGCAGAATCAGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSPNIWQ*GRISSK
Trigger: CTTTGAACTGATTCTGCCTCATTGCCAAATGTTAGG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CCA 90 bp AGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTAAATGTGGTACCTCTTaGCATAATCTGTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: STTPIHIFQSWPGFLMAIKCGTS*HNLCIC
Trigger: GCAAATACACAGATTATGCCAAGAGGTACCACATTT...AATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552109.5
3UTR-3UTR TCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAATTCCTTTCAGGATACTaGGAAATGTGTAAACTGGCA +
Preference number: 2 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEFLSGY*EMCKLA
Trigger: TGCCAGTTTACACATTTCTCAGTATCCTGAAAGGAA...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR TCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGACCTATGTAGAAATATaGGTATGCTCCATTCAGGTA +
Preference number: 2 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKTYVEI*VCSIQV
Trigger: TACCTGAATGGAGCATACTCATATTTCTACATAGGT...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR TCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAGTCTATGTAGAAAGATaGGTATCTTCCCACCTATGT +
Preference number: 2 (lower is better)
Translates to: FKLISILQQDSNMRCQLAVYVER*VSSHLC
Trigger: ACATAGGTGGGAAGATACTCATCTTTCTACATAGAC...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR GCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 2 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR GCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCTTGGCTTTAGTACTTaGCAACCTTACTCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSLGFST*QPYSGN
Trigger: ATTTCCAGAGTAAGGTTGGCAAGTACTAAAGCCAAG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTATTATTCTTACTGCATaGATGTACATGGTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAIILTA*MYMVVN
Trigger: ATTCACCACCATGTACATGCATGCAGTAAGAATAAT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCAAATGTGGTACCTCTTaGCATAATCTGTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCKCGTS*HNLCIC
Trigger: GCAAATACACAGATTATGCCAAGAGGTACCACATTT...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
3UTR-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTATACTTCTATGGCCCTaGATAAGTTTGGGACAAGAA +
Preference number: 2 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFILLWP*ISLGQE
Trigger: TTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTAT...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAAAATGTGGTACCTCTTaGCATAATCTGTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEKCGTS*HNLCIC
Trigger: GCAAATACACAGATTATGCCAAGAGGTACCACATTT...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAGAGAAATGTGTAAACTaGCAGCTGTGTCTGAAAATA +
Preference number: 2 (lower is better)
Translates to: FKLISILQQDSNMRCQLAEKCVN*QLCLKI
Trigger: TATTTTCAGACACAGCTGCCAGTTTACACATTTCTC...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAACATATCTGGTTAGCTaGTATTCCATTGAAAGTATC +
Preference number: 2 (lower is better)
Translates to: FKLISILQQDSNMRCQLATYLVS*YSIESI
Trigger: GATACTTTCAATGGAATACCAGCTAACCAGATATGT...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPD
Trigger: GTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000552109.5
3UTR CCA 72 bp GCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCATaGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: AHLMRASCCFNS*WKADGELRRAK
Trigger: CTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR GCA 72 bp GTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATaGTGCTTCAACTCATGGTGGAAAGCAGATGGTGAA +
Preference number: 3 (lower is better)
Translates to: VQDQGAHLMRAS*CFNSWWKADGE
Trigger: TTCACCATCTGCTTTCCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPV
Trigger: TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
3UTR-3UTR CAA 90 bp CTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 3 (lower is better)
Translates to: LSNLLCNQLGDRSRFPDCNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...ACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
3UTR-3UTR CAA 90 bp ACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 3 (lower is better)
Translates to: TSLALLFSMRIFLMGIHWNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...CCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
3UTR GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCAAATG +
Preference number: 3 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFQM
Trigger: CATTTGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
3UTR CCA 72 bp CATCTGATGAGGGCCTCATGCTGCTTCAACTCATGGTaGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: HLMRASCCFNSW*KADGELRRAKR
Trigger: TCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CAA 90 bp TCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 3 (lower is better)
Translates to: SLALLFSMRIFLMGIHWNNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...GTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
3UTR TCA 72 bp TTCTCTTTCTTTGACTGTGTAGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACCAACTGGGAGACAGGT +
Preference number: 3 (lower is better)
Translates to: FSFFDCVGGTNC*VTCCATNWETG
Trigger: ACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAGTCAAAGAAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
3UTR-3UTR CAA 90 bp CCTGGACATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGCCACATTTTTCAATCTaGGCCTGGTTTTCTTATGGC +
Preference number: 3 (lower is better)
Translates to: PGHSSLCVIRARAALTVLPHFSI*AWFSYG
Trigger: GCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGG...CAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
3UTR GCA 72 bp GGCTCCTCAGATAGACAGGAGGCGGCTCAGGAACCATaGATTTCTTTAAAAAGGACTTATGTAGATGGTCCT +
Preference number: 3 (lower is better)
Translates to: GSSDRQEAAQEP*ISLKRTYVDGP
Trigger: AGGACCATCTACATAAGTCCTTTTTAAAGAAATGCATGGTTCCTGAGCCGCCTCCTGTCTATCTGAGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CAA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACATGGCCCTGGATAAGTTaGGGACAAGAAAACAATGAT +
Preference number: 3 (lower is better)
Translates to: CFNSWWKADGELRRAKRTWPWIS*GQENND
Trigger: ATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCA...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CAA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAGGCATGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: MLYDKKTSSACKTNYTCARHENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCATGCCT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CAA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCGAGATCTCACTGTGTaGCCCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: MLYDKKTSSACKTNYTCARDLTV*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAACACAGTGAGATCTCG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 72 bp ACCAACACAATCAAACTGGGGACTCAGGCCTCAGCATaGGTTTTGGTGAGGACAAACCATATCCAAACCATA +
Preference number: 3 (lower is better)
Translates to: TNTIKLGTQASA*VLVRTNHIQTI
Trigger: TATGGTTTGGATATGGTTTGTCCTCACCAAAACTCATGCTGAGGCCTGAGTCCCCAGTTTGATTGTGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 72 bp GAAAACAGATTTATTTTGGCTTATGAGTCCAAAGGCTaGGGAGTCCAAGATCAGGGAGCCCATCTGATGAGG +
Preference number: 3 (lower is better)
Translates to: ENRFILAYESKG*GVQDQGAHLMR
Trigger: CCTCATCAGATGGGCTCCCTGATCTTGGACTCCTCAGCCTTTGGACTCATAAGCCAAAATAAATCTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 72 bp TTTGGCAATGAGGCAGAATCAGTTCAAAGGTCAGTCTaGCCCAAAGGATTCAAATCCCATCTGTGCGTCACA +
Preference number: 3 (lower is better)
Translates to: FGNEAESVQRSV*PKGFKSHLCVT
Trigger: TGTGACGCACAGATGGGATTTGAATCCTTTGGGTCAGACTGACCTTTGAACTGATTCTGCCTCATTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 72 bp ACTGAGCCTCATGAGAAAGCCTTTAATCCATCTCAATaGCCTAATCACCTCTTAAAGGCACCACCTACCAAC +
Preference number: 3 (lower is better)
Translates to: TEPHEKAFNPSQ*PNHLLKAPPTN
Trigger: GTTGGTAGGTGGTGCCTTTAAGAGGTGATTAGGTCATTGAGATGGATTAAAGGCTTTCTCATGAGGCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 72 bp CAAGAAGCATCCTCACTTCATAACAACCCACTCTTGTaGGAATTCATCCATTCCTGCAAGAGCGAATCCATT +
Preference number: 3 (lower is better)
Translates to: QEASSLHNNPLL*EFIHSCKSESI
Trigger: AATGGATTCGCTCTTGCAGGAATGGATGAATTCTCACAAGAGTGGGTTGTTATGAAGTGAGGATGCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR TCA 72 bp CATGCCATGAATGTAACTTCGTTCTCTAGAAAGACATaGCCTACCATGGATATAGCCAAAGGAAATGGGCTT +
Preference number: 3 (lower is better)
Translates to: HAMNVTSFSRKT*PTMDIAKGNGL
Trigger: AAGCCCATTTCCTTTGGCTATATCCATGGTAGGTCATGTCTTTCTAGAGAACGAAGTTACATTCATGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CAA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAGACTGTGCAGCATCTaGAAAATAATGTGTCACCGT +
Preference number: 3 (lower is better)
Translates to: MLYDKKTSSACKTNYTCARLCSI*KIMCHR
Trigger: ACGGTGACACATTATTTTCAAGATGCTGCACAGTCT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 72 bp TATTACAATGAAGATAGCAATTTGGTGCCACTGCTTTaGTTCATGCTAAGGTGCTGGCAGTTTTACCCATCA +
Preference number: 3 (lower is better)
Translates to: YYNEDSNLVPLL*FMLRCWQFYPS
Trigger: TGATGGGTAAAACTGCCAGCACCTTAGCATGAATCAAAGCAGTGGCACCAAATTGCTATCTTCATTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR-3UTR CAA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCATGGCCCTGGATAAGTTaGGGACAAGAAAACAATGAT +
Preference number: 3 (lower is better)
Translates to: FKLISILQQDSNMRCQLAWPWIS*GQENND
Trigger: ATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCA...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CAA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCAACTACTGAAACTTTaGCTTCTCAACACCGTTCTG +
Preference number: 3 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSQLLKL*LLNTVL
Trigger: CAGAACGGTGTTGAGAAGCAAAAGTTTCAGTAGTTG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 72 bp CAAACAAGTAAGAAATCTCCTAGAATAAGGAGTCTCTaGACAACTAAATGGTTGCTAGAAAGGCTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: QTSKKSPRIRSL*TTKWLLERLLR
Trigger: TCTGAGGAGCCTTTCTAGCAACCATTTAGTTGTTCAGAGACTCCTTATTCTAGGAGATTTCTTACTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CCA 72 bp TTCGCATATTTTAACGTCAGTTCTGTTTATGGAATTTaGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAG +
Preference number: 3 (lower is better)
Translates to: FAYFNVSSVYGI*VCFPGVEVYLK
Trigger: CTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAATATGCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
3UTR-3UTR CAA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCATTACCTGTTACATTaGAAAGCCTGGTATGAACCA +
Preference number: 3 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSHYLLH*KAWYEP
Trigger: TGGTTCATACCAGGCTTTCAAATGTAACAGGTAATG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR TCA 72 bp CAAAAGTCTAGAAGAATCAGTGCCAAACCTCAAATTTaGAGACATAAAGCAAGTATGACAAGAAAACAACGA +
Preference number: 3 (lower is better)
Translates to: QKSRRISAKPQI*RHKASMTRKQR
Trigger: TCGTTGTTTTCTTGTCATACTTGCTTTATGTCTTCAAATTTGAGGTTTGGCACTGATTCTTCTAGACTTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CCA 72 bp ACAACGATGCTGAAAAGATTTCTACCAGATGATAGTTaGTTTAAGCTTCTTTCAGAATGTGGATTTTATAGC +
Preference number: 3 (lower is better)
Translates to: TTMLKRFLPDDS*FKLLSECGFYS
Trigger: GCTATAAAATCCACATTCTGAAAGAAGCTTAAACCAACTATCATCTGGTAGAAATCTTTTCAGCATCGTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGAGGACGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLEDGFG*RFGLVG
Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR GCA 90 bp CAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATTGTTCCACCAAATGGTAACCGAGGACGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QISRQRLEPAGLFHQMVTEDGFG*RFGLVG
Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTC...GGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR GCA 90 bp CCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAGAGGACGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSVQHENLPDGHPLELPEEDGFG*RFGLVG
Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTC...TTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR GCA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCAAATGACAATCTTTTAGAGGACGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PAVQPTGRQVEVSNDNLLEDGFG*RFGLVG
Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTC...TAAAAGATTGTCATTTGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR GCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR GCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGAGCTTTCACCATGTTaGCCAGGCTGGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLELSPC*PGWSWA
Trigger: AGCCCAGGACCAGCCTGGGCAACATGGTGAAAGCTC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR TCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp GTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTCCAACGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VTCCATNWETGRGFQTVQRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...TTGGACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CCTGGACATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGHSSLCVIRARAALTVLAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...CAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp CCTGGACATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGCGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PGHSSLCVIRARAALTVLRTSCT*RPRRCS
Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...CAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR GCA 90 bp CACAGATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HRSTSLALLFSMRIFLMGRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...GCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR GCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR GCA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR GCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTTCATTCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFSFGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGAATGA...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552928.5
CDS-3UTR GCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCATATCTCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPYLGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGAGATA...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR CCA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp GCTAGAGCCGCTTTGACTGTGTTGATCTGCAGAAGCAGCACTAGATGCAGGCGGTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ARAALTVLICRSSTRCRRCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...CCGCCTGCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTTCCTGTTATCTCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: LSNLLCNQLGDRSRFPDCSCYLG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGAGATAACAGGA...ACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR TCA 90 bp GCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: ALLFSMRIFLMGIHWNFLGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...CAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
CDS-3UTR TCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR TCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCAAGCAGATGGTGAACTaGGGAGGGCAAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLKQMVN*GGQREQ
Trigger: CTGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTT...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTGCTTCAGCCCAAAGTaGTGGGATTACTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLCFSPK*WDYWHE
Trigger: CTCATGCCAGTAATCCCAGCACTTTGGGCTGAAGCA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGCAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTTTGTCTCCCATGGCTTaGCTATCACCGCACGCCGAG +
Preference number: 4 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPLSPMA*LSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAA...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTATGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR TCA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR GCA 90 bp ATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATTGTTCCACCAAATGCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MTQISRQRLEPAGLFHQMRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...CATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR GCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCACTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR GCA 90 bp AGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTCCACAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: SNLLCNQLGDRSRFPDCPQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...TGGACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR GCA 90 bp CTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAACTTCTCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: LLFSMRIFLMGIHWNFLKLLGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGAGAAG...TTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR GCA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTCTTCTCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGSLLGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGAGAAG...AGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR CCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCATCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR CCA 90 bp ACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: TSLALLFSMRIFLMGIHWSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...CCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp CAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QHENLPDGHPLELPEIGNAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...ATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR CCA 90 bp CACAGATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HRSTSLALLFSMRIFLMGCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...GCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
CDS-3UTR CCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR CCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTGATTCTTCATTCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFDSSFG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGAATGAAGAATC...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552928.5
CDS-3UTR CCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACAATGTGGATCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVTMWIW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGATCCACATTGT...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548661.5
CDS-3UTR TCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGTGTGGAAGTGTACTTaGAGTAGGGTGAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLVWKCT*SRVKQR
Trigger: CCTTTGTTTCACCCTACTTCAAGTACACTTCCACAC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp TGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTCCCTTAGATTTCTGGTaGGTTGCCCAGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CPSVQHENLPDGHPLELPPLDFW*VAQSLF
Trigger: GAAGAGGCTCTGGGCAACTCACCAGAAATCTAAGGG...AGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551268.5
CDS-3UTR GCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAGAGGACGGCTTCGGCTaGCGCTTCGGCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLAEDGFG*RFGLVG
Trigger: CCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTC...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGSRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...AGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR GCA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTTTGTCTCCCATGGCTTaGCTATCACCGCACGCCGAG +
Preference number: 4 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGSLSPMA*LSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAA...AGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547254.5
CDS-3UTR CCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: HENLPDGHPLELPEIGNFAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTATGAGGCTTCTCCTCTaGGTGAAGATGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFMRLLL*VKMTWT
Trigger: TGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCAT...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp TGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTCTTTTTCTTCTCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: CPSVQHENLPDGHPLELPLFLLG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGAGAAGAAAAAG...AGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR TCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGCGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGRTSCT*RPRRCS
Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCCGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HENLPDGHPLELPEIGNFRTSCT*RPRRCS
Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR TCA 90 bp TGGAAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAACGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: WKFQRFLGPRGTHNNFKQRTSCT*RPRRCS
Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...TTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR TCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTCCAAATGCTaGGCACTACTCCGATCCACA +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPVTSKC*ALLRST
Trigger: TGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTAC...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR GCA 90 bp GTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTCCAATTGACTGTGTTGATCTaGAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: VTCCATNWETGRGFQTVQLTVLI*RSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAA...TTGGACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR GCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACACTGATGAGGGCCTCATaGTGCTTCAACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CFNSWWKADGELRRAKRTLMRAS*CFNSWW
Trigger: CCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAG...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: RSTSLALLFSMRIFLMGIQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...GATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR GCA 90 bp ATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: IHLSCPSVQHENLPDGHPQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...TGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR GCA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCAGATCCACCTCTCTTaGCCTTCTGTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PAVQPTGRQVEVSSNLSYQIHLS*PSVQHE
Trigger: CTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTG...ATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACATCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: CFNSWWKADGELRRAKRTSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTTGACTGTGTTGATCTGCTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: HSSLCVIRARAALTVLICSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...GCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547254.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp ATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: MRIFLMGIHWNFLKLEISAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...TGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp AAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KFQRFLGPRGTHNNFKQCAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...ACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp ATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: MRIFLMGIHWNFLKLEISAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...TGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTTGGGTCTGTTTTCCTaGTGTGGAAGTGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLLGLFS*CGSVLE
Trigger: TTCAAGTACACTTCCACACCAGGAAAACAGACCCAA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACACCATGTTGCCCAGGCTaGTCCTGGGCTCAAAATATC +
Preference number: 4 (lower is better)
Translates to: CFNSWWKADGELRRAKRTPCCPG*SWAQNI
Trigger: GATATTTTGAGCCCAGGACCAGCCTGGGCAACATGG...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTACTGATGGGCATCCACTaGAACTTCCTGAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVLMGIH*NFLKLE
Trigger: TTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAG...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCACAAACAATGTGGATCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPQTMWI*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGATCCACATTGTTTG...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548661.5
3UTR CAA 72 bp ACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACCAGGCTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQISRQRLEPAG*FHQMVTRLSSC
Trigger: ACAGGAAGAGAGCCTGGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR TCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTTCCTTTCAGGATACTaGGAAATGTGTAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLFLSGY*EMCKLA
Trigger: TGCCAGTTTACACATTTCTCAGTATCCTGAAAGGAA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp GCTAGAGCCGCTTTGACTGTGTTGATCTGCAGAAGCAGCACTAGATGCAGGCGGCCTGTTATCTCTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: ARAALTVLICRSSTRCRRPVISS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGAGATAACAGG...CCGCCTGCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR GCA 90 bp ATCTCCAACAGTAACTTCCAAATGCTGAGCACTACTCCGATCCACATTTTTCAATGGATCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: ISNSNFQMLSTTPIHIFQWIGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGATCCA...TTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGGAGCTTTCACCATGTTaGCCAGGCTGGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGELSPC*PGWSWA
Trigger: AGCCCAGGACCAGCCTGGGCAACATGGTGAAAGCTC...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCTCAGCCTCCCAAGGTaGTGGGCTTACAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCALSLPR*WAYRCG
Trigger: CCCACACCTGTAAGCCCAGCACCTTGGGAGGCTGAG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp GAGGCACTCACAATAACTTCAAACAATGTGGATTTTCAGGAACACAGTGTCCCTATGTACGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: EALTITSNNVDFQEHSVPMYGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGTACAT...AGGGACACTGTGTTCCTGAAAATCCACATTGTTTGAAGTTATTGTGAGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551268.5
CDS-3UTR CCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCGCTGCCGCTTCGGCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCAAASA*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGC...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327791.8
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp AGATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: RSTSLALLFSMRIFLMGIISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...GATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
3UTR CAA 72 bp CATTCCTCTCTCTGTGTTATCAGAGCTAGAGCCGCTTaGACTGTGTTGATCTGCAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: HSSLCVIRARAA*TVLICRSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCATCCACTGGAACTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPSTGTS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGA...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR TCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAAGGTTTCCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVRFPVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGGAAACCT...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR GCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCTGGGAGGTGGAGGTTaGAGTGAGCCGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSLGGGG*SEPRSR
Trigger: GCGTGACCTCGGCTCACTGCAACCTCCACCTCCCAG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp GAAGCAGCACTAGATGCAGGCGGTGACTTTGTTTTCTCCTTAAAGTCTGTAATAACAATGTGGATCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: EAALDAGGDFVFSLKSVITMWIG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGATCCACATTGT...TATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CCA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACAAATGTGGTACCTCTTaGCATAATCTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPDKCGTS*HNLCIC
Trigger: GCAAATACACAGATTATGCCAAGAGGTACCACATTT...GTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCGAGAAATGTGTAAACTaGCAGCTGTGTCTGAAAATA +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLEKCVN*QLCLKI
Trigger: TATTTTCAGACACAGCTGCCAGTTTACACATTTCTC...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACCTGATGGGCATCCACTaGAACTTCCTGAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: SLALLFSMRIFLMGIHWNLMGIH*NFLKLE
Trigger: TTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAG...GTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp CTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTGATGGGCATCCACTaGAACTTCCTGAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: LSCPSVQHENLPDGHPLELMGIH*NFLKLE
Trigger: TTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAG...TTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCCCCAAGACTGGCTGTaGAGTAGGACACCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAPQDWL*SRTPAS
Trigger: GGAAGCTGGTGTCCTACTCCACAGCCAGTCTTGGGG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCCCACTTCTCTGTCCTaGGCCAACTCCCCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAPTSLS*ANSPVY
Trigger: GTACACAGGGGAGTTGGCCCAGGACAGAGAAGTGGG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCACGCACATCATGCACTTaGAGGCCTCGGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLARTSCT*RPRRCS
Trigger: GGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCG...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp AATGCTGAGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: NAEHYSDPHFSILAWFSYGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...ATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTTCCACTGGAACTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPSTGTS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGA...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR TCA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATTCCACTGGAACTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: PAVQPTGRQVEVSSNLSYSTGTS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGA...ATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR GCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327791.8
ENST00000534854.7
ENST00000552109.5
CDS-3UTR GCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTGGATCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFWIGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGATCCA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp GAAATTGGAAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCACTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: EIGNFNGSLVLEALTITSLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...TGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
CDS-3UTR GCA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: HENLPDGHPLELPEIGNFLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGCTGATGAGGGCCTCATaGTGCTTCAACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGLMRAS*CFNSWW
Trigger: CCACCATGAGTTGAAGCAGCATGAGGCCCTCATCAG...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTGTTTCCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFVSGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGGAAAC...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534854.7
CDS-3UTR GCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATGTCCCGGGTGGAGGTaGCCTTCCGCACATCGCACA +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVCPGWR*PSAHRT
Trigger: TGTGCGATGTGCGGAAGGGCACCTCCACCCGGGACA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTTGTCTCCCATGGCTTaGCTATCACCGCACGCCGAG +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCLSPMA*LSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: HENLPDGHPLELPEIGNFSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAGCCGCTTCGGCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVAASAW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGC...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGSISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...AGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR CCA 90 bp CTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAAATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: LLFSMRIFLMGIHWNFLKISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...TTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTTTTTGTATGGAATTTaGCTAAAAGAACCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLFLYGI*LKEPSA
Trigger: AGCACTGGGTTCTTTTAGCCAAATTCCATACAAAAA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAGTCGAGGTTTCCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEVEVSG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGGAAACCTCGAC...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534854.7
CDS-3UTR CCA 90 bp ACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACAATGTGGATCTGTaGAGATTACCCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSLALLFSMRIFLMGIHWNNVDL*RLPNRR
Trigger: TCTCCTATTGGGTAATCTCCACAGATCCACATTGTT...CCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR CCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAAACAATGTGGATCTGTaGAGATTACCCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPNNVDL*RLPNRR
Trigger: TCTCCTATTGGGTAATCTCCACAGATCCACATTGTT...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000552928.5
CDS-3UTR CCA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCCTGATGGGCATCCACTaGAACTTCCTGAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFLMGIH*NFLKLE
Trigger: TTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAG...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CCA 90 bp GAAATTGGAAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCACTTTTTCTTCTCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: EIGNFNGSLVLEALTITSLFLLG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGAGAAGAAAAAG...TGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR TCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR TCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTAAACTTATGATTTCATaGTTCTTCATTCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFKLMIS*FFIRVE
Trigger: CTCCACCCGAATGAAGAATCATGAAATCATAAGTTT...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552928.5
CDS-3UTR TCA 90 bp ATCCACCTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCAAGGTTTCCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: IHLSCPSVQHENLPDGHPRFPVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGGAAACCT...TGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR TCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATGCAGTGAGCCTGGATaGTGCCACTGCAACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVCSEPG*CHCNPA
Trigger: GGCTGGGTTGCAGTGGCATCATCCAGGCTCACTGCA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTTATCTCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPVISVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGAGATAAC...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR GCA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCATTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552109.5
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAATTGTCTCCCATGGCTTaGCTATCACCGCACGCCGAG +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMELSPMA*LSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAA...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp ACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTTTTGTCTCCCATGGCTTaGCTATCACCGCACGCCGAG +
Preference number: 4 (lower is better)
Translates to: TPIHIFQSWPGFLMAILFLSPMA*LSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAA...AAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCASSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCATGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: MRIFLMGIHWNFLKLEISCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...TGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000551268.5
CDS-3UTR CCA 90 bp AATGCTGAGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: NAEHYSDPHFSILAWFSYCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...ATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCACATTTTTCAATCTTaGCCTGGTTTTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFHIFQS*PGFLMA
Trigger: AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTG...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCATGAGGCTTCTCCTCTaGGTGAAGATGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFMRLLL*VKMTWT
Trigger: TGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCAT...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCGTCGAGGTTTCCTGGTaGGGCTCTTCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCVEVSW*GSSCLP
Trigger: TGGGAGACAAGAAGAGCCCCACCAGGAAACCTCGAC...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380790.4
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCAGGTCGAGGTTTCCTaGTGGGGCTCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCQVEVS*WGSSCL
Trigger: GAGACAAGAAGAGCCCCACCAGGAAACCTCGACCTG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380790.4
CDS-3UTR TCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTTGGAGGCACAAACTGCTaGGTAACCTGCTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: TPIHIFQSWPGFLMAILFGGTNC*VTCCAT
Trigger: GGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCC...AAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCAGGTTTCCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFRFPVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGGAAACCT...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547254.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR TCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACGGTGGGAGGATTCCTTaGACCTGGGAGTTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNGGRIP*TWEFEA
Trigger: AGCCTCGAACTCCCAGGTTCAAGGAATCCTCCCACC...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACCGCTGTTCCGGAAGGTaGAGACGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNRCSGR*RRYSPS
Trigger: ACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCG...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR GCA 90 bp CAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATAGATTTCTGGTGAGTTaGCCAGAGCCTCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QHENLPDGHPLELPEIGNRFLVS*PEPLQF
Trigger: AAACTGAAGAGGCTCTGGGCAACTCACCAGAAATCT...ATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551268.5
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAACAATGTGGATCGGGTaGAGGTGCCCTTCCGCACAT +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLATMWIG*RCPSAH
Trigger: ATGTGCGGAAGGGCACCTCCACCCGATCCACATTGT...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTGCTGTGCAACCAACTaGGAGACAGGTCGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCCCATN*ETGRGF
Trigger: GAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACAAGATTCATACTTCTATaGCCCTGGATAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CFNSWWKADGELRRAKRTRFILL*PWISLG
Trigger: TCCCAAACTTATCCAGGGCCATAGAAGTATGAATCT...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCATGCCCAGGCTGGTCCTaGGCTCAAAATATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLACPGWS*AQNICL
Trigger: CAGGCAGATATTTTGAGCCCAGGACCAGCCTGGGCA...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCCATGTTGCCCAGGCTaGTCCTGGGCTCAAAATATC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCPCCPG*SWAQNI
Trigger: GATATTTTGAGCCCAGGACCAGCCTGGGCAACATGG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCTGGCGGAAGCCTCAGTaGAAACGAAAACTTCTAGAC +
Preference number: 4 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFWRKPQ*KRKLLD
Trigger: GTCTAGAAGTTTTCGTTTCCACTGAGGCTTCCGCCA...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATGCAACCTCGAACTCTaGGGCTCAAGGGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVCNLEL*GSRDPP
Trigger: GGGAGGATCCCTTGAGCCCCAGAGTTCGAGGTTGCA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTGAGGAAGGAAGAAGCTaGGAGGGTCGTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSEEGRS*EGRGVE
Trigger: TTCTACACCACGACCCTCTCAGCTTCTTCCTTCCTC...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTACAGAGGCTGAGGCATaGGAATTGCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSTEAEA*ELLEPG
Trigger: CCCAGGTTCAAGCAATTCTCATGCCTCAGCCTCTGT...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCACTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLALSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp TACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: YSDPHFSILAWFSYGYSFLSNLL*NQLGDR
Trigger: CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAG...AAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGTTGACTGTGTTGATCTaGAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGLTVLI*RSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAA...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTGCTTCAGCCCAAAGTaGTGGGATTACTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCCFSPK*WDYWHE
Trigger: CTCATGCCAGTAATCCCAGCACTTTGGGCTGAAGCA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTTTGCCCAGGCTGGAGTaGAGTGGTATGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSLPRLE*SGMITA
Trigger: AGCTGTGATCATACCACTGCACTCCAGCCTGGGCAA...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAGTTTTACCCATCACTaGCTCTGCACCATCACAGTG +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCASFTHH*LCTITV
Trigger: CACTGTGATGGTGCAGAGGCAGTGATGGGTAAAACT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTCTTCTTGTCTCCCATaGCTTGGCTATCACCGCACG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFSSCLP*LGYHRT
Trigger: CGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AACAGTAACTTCCAAATGCTGAGCACTACTCCGATCCACATTTTTCAATCTTGGATTTCAACGGTTCCTTaGTCCTCGAGGCACTCACAA +
Preference number: 4 (lower is better)
Translates to: NSNFQMLSTTPIHIFQSWISTVP*SSRHSQ
Trigger: TTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAAT...CCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CCA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACACACATTTTTCAATCTTaGCCTGGTTTTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: CFNSWWKADGELRRAKRTHIFQS*PGFLMA
Trigger: AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTG...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCATGAGGCTTCTCCTCTaGGTGAAGATGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCMRLLL*VKMTWT
Trigger: TGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCAT...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp CTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAAAACAATGTGGATCTGTaGAGATTACCCAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLFSMRIFLMGIHWNFLKNNVDL*RLPNRR
Trigger: TCTCCTATTGGGTAATCTCCACAGATCCACATTGTT...TTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000547254.5
CDS-3UTR CCA 90 bp TGGAAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAACTGATGGGCATCCACTaGAACTTCCTGAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: WKFQRFLGPRGTHNNFKQLMGIH*NFLKLE
Trigger: TTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAG...TTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CCA 90 bp ATCAGAGCTAGAGCCGCTTTGACTGTGTTGATCTGCAGAAGCAGCACTAGATGCATTCACCTTGAATCTTaGGAAGCTCTTCAATTAAAG +
Preference number: 4 (lower is better)
Translates to: IRARAALTVLICRSSTRCIHLES*EALQLK
Trigger: CTTTAATTGAAGAGCTTCCCAAGATTCAAGGTGAAT...GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR TCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCGTAACTTCCAAATGCTaGGCACTACTCCGATCCACA +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCVTSKC*ALLRST
Trigger: TGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTAC...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR TCA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCTCCACTGGAACTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: HENLPDGHPLELPEIGNFSTGTS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGA...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR TCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACCCTTAGATTTCTGGTaGGTTGCCCAGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVPLDFW*VAQSLF
Trigger: GAAGAGGCTCTGGGCAACTCACCAGAAATCTAAGGG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp AATGCTGAGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATTTGACTGTGTTGATCTaGAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: NAEHYSDPHFSILAWFSYLTVLI*RSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAA...ATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGGCTAAAAGAACCCAGTaGTCAAACCACACTGTAAGT +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGAKRTQ*SNHTVS
Trigger: ACTTACAGTGTGGTTTGAGCACTGGGTTCTTTTAGC...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAGATTTCTGGTGAGTTaGCCAGAGCCTCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCARFLVS*PEPLQF
Trigger: AAACTGAAGAGGCTCTGGGCAACTCACCAGAAATCT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTATGAGGCTTCTCCTCTaGGTGAAGATGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFMRLLL*VKMTWT
Trigger: TGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCAT...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAATGAGGCTTCTCCTCTaGGTGAAGATGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEMRLLL*VKMTWT
Trigger: TGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCAT...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp TACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTGTAACTTCCAAATGCTaGGCACTACTCCGATCCACA +
Preference number: 4 (lower is better)
Translates to: YSDPHFSILAWFSYGYSFVTSKC*ALLRST
Trigger: TGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTAC...AAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR TCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCGTCTATGTAGAAAGATaGGTATCTTCCCACCTATGT +
Preference number: 4 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFVYVER*VSSHLC
Trigger: ACATAGGTGGGAAGATACTCATCTTTCTACATAGAC...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGGTACTTGAAGTAGGGTaGAACAAAGGCAGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKVLEVG*NKGRLR
Trigger: TCTCAACCTGCCTTTGTTTCACCCTACTTCAAGTAC...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGAACAACCCACTCTTGTaGGAATTCATCCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKNNPLL*EFIHSC
Trigger: GCAGGAATGGATGAATTCTCACAAGAGTGGGTTGTT...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCAACAACCCACTCTTGTaGGAATTCATCCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCNNPLL*EFIHSC
Trigger: GCAGGAATGGATGAATTCTCACAAGAGTGGGTTGTT...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTGGTAGGAGGATCACTTaGGCTCAAGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSGRRIT*AQEFET
Trigger: AGTCTCAAACTCTTGAGCTCAAGTGATCCTCCTACC...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCTGTCCACTACTAGATaGAGTACCAATAAGACACCA +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCALSTTR*STNKTP
Trigger: TGGTGTCTTATTGGTACTTCATCTAGTAGTGGACAG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACTTGGTGCCACTGCTTTaGTTCATGCTAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNLVPLL*FMLRCW
Trigger: CCAGCACCTTAGCATGAATCAAAGCAGTGGCACCAA...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTTGACTGTGTTGATCTaGAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCLTVLI*RSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR GCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTCTCAAAATATCTGCCTaGTTCAGCCCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFLKISA*FSPKCW
Trigger: CCAGCACTTTGGGCTGAAGCAGGCAGATATTTTGAG...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAACTCAAAATATCTGCCTaGTTCAGCCCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMELKISA*FSPKCW
Trigger: CCAGCACTTTGGGCTGAAGCAGGCAGATATTTTGAG...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTGGGCTCAAAATATCTaGCTGCTTCAGCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFWAQNI*LLQPKV
Trigger: CACTTTGGGCTGAAGCAGGCAGATATTTTGAGCCCA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAAATCATTAGCAAACTaGATCCTTCTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAKSLAN*ILLLCS
Trigger: GCTGCAGAGCAGAAGGATGCAGTTTGCTAATGATTT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTGCGGCTCAGGAACCATaGATTTCTTTAAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAAAQEP*ISLKRT
Trigger: AGTCCTTTTTAAAGAAATGCATGGTTCCTGAGCCGC...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGATACTTCTATGGCCCTaGATAAGTTTGGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGILLWP*ISLGQE
Trigger: TTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTAT...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCTCTGTTTATGGAATTTaGGTCTGTTTTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFSVYGI*VCFPGV
Trigger: CACACCAGGAAAACAGACCCAAATTCCATAAACAGA...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACATACAAAAATTAGCCTaGTGTGGTGGCGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNIQKLA*CGGGHL
Trigger: CAGGTGCCCGCCACCACACCAGGCTAATTTTTGTAT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTCGAGGTTTCCTTCCTaGAATTGGAAATTTCAACGG +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKSRFPS*NWKFQR
Trigger: CCGTTGAAATTTCCAATTTCAGGAAGGAAACCTCGA...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR TCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGACCTATGTAGAAATATaGGTATGCTCCATTCAGGTA +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGTYVEI*VCSIQV
Trigger: TACCTGAATGGAGCATACTCATATTTCTACATAGGT...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAGTACTTGAAGTAGGGTaGAACAAAGGCAGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEVLEVG*NKGRLR
Trigger: TCTCAACCTGCCTTTGTTTCACCCTACTTCAAGTAC...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGCAGCATGAGTTTTGGTaGGGACAAACCATATCCAAA +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKQHEFW*GQTISK
Trigger: TTTGGATATGGTTTGTCCTCACCAAAACTCATGCTG...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCAGCATGAGTTTTGGTaGGGACAAACCATATCCAAA +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCQHEFW*GQTISK
Trigger: TTTGGATATGGTTTGTCCTCACCAAAACTCATGCTG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAAGGTTTCCAGTAACTTaGGTTATCCTATTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: MRIFLMGIHWNFLKLEISRFPVT*VILLGL
Trigger: AAGACCCAATAGGATAACTCAAGTTACTGGAAACCT...TGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR GCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAATTGACTGTGTTGATCTaGAGAAGCAGCACTAGATGC +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMELTVLI*RSSTRC
Trigger: GCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAA...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp TGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTGTACTTGAAGTAGGGTTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: CLWNLGLFSWCGSVLEVGFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...CCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGGCTAAAAGAACCCAGTaGTCAAACCACACTGTAAGT +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKAKRTQ*SNHTVS
Trigger: ACTTACAGTGTGGTTTGAGCACTGGGTTCTTTTAGC...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACCTTCTTCTTCCAGGTaGCAGGTATTCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVPSSSR*QVFSLF
Trigger: AAACAGGCTGAATACCTGGCACCTGGAAGAAGAAGG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACAAACTGCATCCTTCTaGTCTGCAGCTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVQTASF*SAAIQS
Trigger: AGACTGGATAGCTGCAGAGCAGAAGGATGCAGTTTG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTAAGATAGCAATTTGGTaGCACTGCTTTGATTCATGC +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAKIAIW*HCFDSC
Trigger: GCATGAATCAAAGCAGTGGCACCAAATTGCTATCTT...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTGACAAACTACACATGTaGTTTCCCTTAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCADKLHM*FPLTTV
Trigger: TACAGTGGTTAAGGGAAAGCACATGTGTAGTTTGTC...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCCACATTTTTCAATCTTaGCCTGGTTTTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFHIFQS*PGFLMA
Trigger: AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTG...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCGCCCTGTTTTATAGATaGAAAGTAAGCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFALFYR*KVSLGN
Trigger: ATTACCCAAGCTTACTTTCCATCTATAAAACAGGGC...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGTTGGGTCTGTTTTCCTaGTGTGGAAGTGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKLGLFS*CGSVLE
Trigger: TTCAAGTACACTTCCACACCAGGAAAACAGACCCAA...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTGCTTCAACTCATGGTaGAAAGCAGATGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFCFNSW*KADGEL
Trigger: CAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAATGCTTCAACTCATGGTaGAAAGCAGATGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMECFNSW*KADGEL
Trigger: CAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACAAAGGGGCCGAATGGTaGCTCATTCCTATAATCCCA +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNKGAEW*LIPIIP
Trigger: TGGGATTATAGGAATGAGCCACCATTCGGCCCCTTT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAAATCTTCAGATAGGCTaGGCACAGTGTCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVNLQIG*AQCLTP
Trigger: AGGAGTGAGACACTGTGCCCAGCCTATCTGAAGATT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CAA 72 bp CAAACTACACATGTGCTTTCCCTTAACCACTGTACTTaGGTATACAGTAGAAGTGCTTTATGTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: QTTHVLSLNHCT*VYSRSALCVVP
Trigger: GGGAACTACACATAAAGCACTTCTACTGTATACCAAAGTACAGTGGTTAAGGGAAAGCACATGTGTAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTTCCTTTCAGGATACTaGGAAATGTGTAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCFLSGY*EMCKLA
Trigger: TGCCAGTTTACACATTTCTCAGTATCCTGAAAGGAA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp ATCTCCAACAGTAACTTCCAAATGCTGAGCACTACTCCGATCCACATTTTTCAAACTTTAAATTCACCTTaGATCTTGGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ISNSNFQMLSTTPIHIFQTLNSP*ILGSSS
Trigger: TGAAGAGCTTCCCAAGATTCAAGGTGAATTTAAAGT...TTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAAAGCTGAGAGGGTCGTaGTGTAGAACACTTACTTTC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVKLRGS*CRTLTF
Trigger: GAAAGTAAGTGTTCTACACCACGACCCTCTCAGCTT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATTCATGCTAAGGTGCTaGCAGTTTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVFMLRC*QFYPSL
Trigger: CAGTGATGGGTAAAACTGCCAGCACCTTAGCATGAA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAGTCTATGTAGAAAGATaGGTATCTTCCCACCTATGT +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEVYVER*VSSHLC
Trigger: ACATAGGTGGGAAGATACTCATCTTTCTACATAGAC...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAATTTATTTTGGCTTATaGGTCCAAAGGCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEIYFGL*VQRLRS
Trigger: ACTCCTCAGCCTTTGGACTCATAAGCCAAAATAAAT...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACACACAGATTCTACCCTaGATTTCAGAAACCACTAGG +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNTQILP*ISETTR
Trigger: CCTAGTGGTTTCTGAAATTCAGGGTAGAATCTGTGT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACCCTAACATTTGGCAATaGGGCAGAATCAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNPNIWQ*GRISSK
Trigger: CTTTGAACTGATTCTGCCTCATTGCCAAATGTTAGG...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCTGAAACCACATCAATaGAGTTTTCAGTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSLKPHQ*SFQCSL
Trigger: AAGGGAACACTGAAAACTTCATTGATGTGGTTTCAG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCACATTTTTCAATCTTaGCCTGGTTTTCTTATGGCT +
Preference number: 4 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCHIFQS*PGFLMA
Trigger: AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAATACTTCTATGGCCCTaGATAAGTTTGGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLAILLWP*ISLGQE
Trigger: TTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTAT...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAAGATTCATACTTCTATaGCCCTGGATAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMERFILL*PWISLG
Trigger: TCCCAAACTTATCCAGGGCCATAGAAGTATGAATCT...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGGCCCTGTTTTATAGATaGAAAGTAAGCTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKALFYR*KVSLGN
Trigger: ATTACCCAAGCTTACTTTCCATCTATAAAACAGGGC...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCATCTGTTTATGGAATTTaGGTCTGTTTTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLASVYGI*VCFPGV
Trigger: CACACCAGGAAAACAGACCCAAATTCCATAAACAGA...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATTTAAAGGGGCCGAATaGTGGCTCATTCCTATAATC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVFKGAE*WLIPII
Trigger: GATTATAGGAATGAGCCACCATTCGGCCCCTTTAAA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTTTACATTTGAAAGCCTaGTATGAACCATTTAGACCA +
Preference number: 4 (lower is better)
Translates to: MLYDKKTSSACKTNYTCALHLKA*YEPFRP
Trigger: TGGTCTAAATGGTTCATACCAGGCTTTCAAATGTAA...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACCAAACCTCTAACATCTaGTTAGTAGAAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNQTSNI*LVEDTW
Trigger: CCAGGTGTCTTCTACTAACCAGATGTTAGAGGTTTG...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAACCTATGTAGAAATATaGGTATGCTCCATTCAGGTA +
Preference number: 4 (lower is better)
Translates to: FKLISILQQDSNMRCQLATYVEI*VCSIQV
Trigger: TACCTGAATGGAGCATACTCATATTTCTACATAGGT...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTGCCAAACCTCAAATTTaGAGACATAAAGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSAKPQI*RHKASM
Trigger: CATACTTGCTTTATGTCTTCAAATTTGAGGTTTGGC...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTAGAATAAGGAGTCTCTaGACAACTAAATGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSRIRSL*TTKWLL
Trigger: TAGCAACCATTTAGTTGTTCAGAGACTCCTTATTCT...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATCTGCACCATCACAGTaGAAAAGGCAAATAACATCT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVSAPSQ*KRQITS
Trigger: AGATGTTATTTGCCTTTTTCACTGTGATGGTGCAGA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTTCATGGCACTTAACTaGAGAGACCAAAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFFMALN*RDQNVK
Trigger: CTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAAAGACTAGCTCTGCTTaGAAGACAAACTACACATGT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVKTSSA*KTNYTC
Trigger: ACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTTTAGTAGAAGACACCTaGATTGTCACATCTATCTCA +
Preference number: 4 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSLVEDT*IVTSIS
Trigger: TGAGATAGATGTGACAATCCAGGTGTCTTCTACTAA...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAATGGTTGATATGAAATaGGATATGAACCCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVMVDMK*DMNPGY
Trigger: GTAACCTGGGTTCATATCTCATTTCATATCAACCAT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR TCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAAGAAAACAACGATGCTaGAAAGATTTCTACCAGATG +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVRKQRC*KDFYQM
Trigger: CATCTGGTAGAAATCTTTTCAGCATCGTTGTTTTCT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATTCTCAACACCGTTCTaGAGTCCTTTAATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVFSTPF*SPLILF
Trigger: AAACAAGATTAAAGGACTGCAGAACGGTGTTGAGAA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR GCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACGGCATCGTATATTTTTaGAAACCTCTAACATCTGGT +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNGIVYF*KPLTSG
Trigger: ACCAGATGTTAGAGGTTTGCAAAAATATACGATGCC...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTTTAAAGGAACATATCTaGTTAGCTGGTATTCCATTG +
Preference number: 4 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFLKEHI*LAGIPL
Trigger: CAATGGAATACCAGCTAACCAGATATGTTCCTTTAA...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAATTTTTGTATGGAATTTaGCTAAAAGAACCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEFLYGI*LKEPSA
Trigger: AGCACTGGGTTCTTTTAGCCAAATTCCATACAAAAA...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACATGAAGATAGCAATTTaGTGCCACTGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNMKIAI*CHCFDS
Trigger: TGAATCAAAGCAGTGGCACCAAATTGCTATCTTCAT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
3UTR CAA 72 bp CCATTATTAGCCCTGTTTTATAGATGGAAAGTAAGCTaGGGTAATTTAAGCTCATTTCCATTCTACAACAGG +
Preference number: 4 (lower is better)
Translates to: PLLALFYRWKVS*GNLSSFPFYNR
Trigger: CCTGTTGTAGAATGGAAATGAGCTTAAATTACCCAAGCTTACTTTCCATCTATAAAACAGGGCTAATAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR GCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACATTATTCTTACTGCATaGATGTACATGGTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNIILTA*MYMVVN
Trigger: ATTCACCACCATGTACATGCATGCAGTAAGAATAAT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACCTACCAGATGATAGTTaGTTTAAGCTTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNLPDDS*FKLLSE
Trigger: TTCTGAAAGAAGCTTAAACCAACTATCATCTGGTAG...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CCA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATTAACCACTGTACTTTaGTATACAGTAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVLTTVL*YTVEVL
Trigger: AAGCACTTCTACTGTATACCAAAGTACAGTGGTTAA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS GCA 90 bp CCCAGTAACCCTCATCCGAGGACGGCTTCGGCTGCCGCTTCGGCCTaGAGGACACAACCCGGACACGACGCGGCGCGGGGTCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSNPHPRTASAAASA*RTQPGHDAARGHQQ
Trigger: CTGCTGGTGACCCCGCGCCGCGTCGTGTCCGGGTTGTGTCCTGCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546782.1
ENST00000547724.1
ENST00000548917.1
CDS-3UTR CAA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR CAA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCTTGTCTCCCATGGCTaGGCTATCACCGCACGCCGA +
Preference number: 5 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFLVSHG*AITARR
Trigger: TCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAG...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547351.5
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR CAA 90 bp AAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCACTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: KLLSNLLCNQLGDRSRFPLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...TGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
CDS-3UTR CAA 90 bp CTCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LSCPSVQHENLPDGHPLELVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...TTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp TCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SLALLFSMRIFLMGIHWNSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...GTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGAGCTAGAGCCGCTTaGACTGTGTTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSRARAA*TVLICR
Trigger: TCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCT...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp GCTAGAGCCGCTTTGACTGTGTTGATCTGCAGAAGCAGCACTAGATGCAGGCGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACC +
Preference number: 5 (lower is better)
Translates to: ARAALTVLICRSSTRCRRLEPAG*FHQMVT
Trigger: GGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAG...CCGCCTGCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp TGCTTCAACTCATGGTGGAAAGCAGATGGTGAACTGAGGAGGGCAAAGAGAACACTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: CFNSWWKADGELRRAKRTLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...TGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547254.5
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CAA 90 bp CTTGAGTTATCCTATTGGGTCTTTTCCCTCACAGATCCACCTCTCTTGCCCTTCTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LELSYWVFSLTDPPLLPFSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...GAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CAA 90 bp CTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: LLSNLLCNQLGDRSRFPVNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...TACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CAA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTGCCGCTTTGACTGTGTaGATCTGCAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFAALTV*ICRSST
Trigger: AGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGC...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp AGGAGGCACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATA +
Preference number: 5 (lower is better)
Translates to: RRHKLLSNLLCNQLGDRSPRPLC*SIRRII
Trigger: TATTATCCTCCTTATTGACAAACAGAGCGGTCGCGG...CGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548661.5
ENST00000551268.5
CDS-3UTR CAA 90 bp GTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGACTGTCCAACTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACC +
Preference number: 5 (lower is better)
Translates to: VTCCATNWETGRGFQTVQLEPAG*FHQMVT
Trigger: GGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAG...TTGGACAGTCTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546726.5
ENST00000552109.5
CDS-3UTR CAA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCAAATGACAATCTTTTATCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PAVQPTGRQVEVSNDNLLSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...TAAAAGATTGTCATTTGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CAA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548661.5
ENST00000551268.5
ENST00000552928.5
CDS-3UTR CAA 90 bp AGGAGTCCAAGATCAGGGAGCCCATCTGATGAGGGCCTCATGCTGCTTCAACTCTGGCCCTGGATAAGTTaGGGACAAGAAAACAATGAT +
Preference number: 5 (lower is better)
Translates to: RSPRSGSPSDEGLMLLQLWPWIS*GQENND
Trigger: ATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCA...GAGTTGAAGCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp CTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACC +
Preference number: 5 (lower is better)
Translates to: LALLFSMRIFLMGIHWNFLEPAG*FHQMVT
Trigger: GGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAG...GAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR CAA 90 bp AAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTCTTGTCTCCCATGGCTaGGCTATCACCGCACGCCGA +
Preference number: 5 (lower is better)
Translates to: KFQRFLGPRGTHNNFKQCLVSHG*AITARR
Trigger: TCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAG...ACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp AGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTGTCTCCCATGGCTaGGCTATCACCGCACGCCGA +
Preference number: 5 (lower is better)
Translates to: STTPIHIFQSWPGFLMAILVSHG*AITARR
Trigger: TCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAG...AATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp TGGAAATTTCAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WKFQRFLGPRGTHNNFKQSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...TTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp ATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATTGTTCCACCAAATGAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: MTQISRQRLEPAGLFHQMNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...CATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR CAA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCAAATGACAATCTTTTAGCCGCTTTGACTGTGTaGATCTGCAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: PAVQPTGRQVEVSNDNLLAALTV*ICRSST
Trigger: AGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGC...TAAAAGATTGTCATTTGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CAA 90 bp TCTCTTGCCCTTCTGTTCAGCATGAGAATCTTCCTGATGGGCATCCACTGGAACCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATA +
Preference number: 5 (lower is better)
Translates to: SLALLFSMRIFLMGIHWNPRPLC*SIRRII
Trigger: TATTATCCTCCTTATTGACAAACAGAGCGGTCGCGG...GTTCCAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp GCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCCAGTAACTTGAGTTATCCTCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATA +
Preference number: 5 (lower is better)
Translates to: AVQPTGRQVEVSSNLSYPPRPLC*SIRRII
Trigger: TATTATCCTCCTTATTGACAAACAGAGCGGTCGCGG...AGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548661.5
ENST00000551268.5
CDS-3UTR CAA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGCTTGTCTCCCATGGCTaGGCTATCACCGCACGCCGA +
Preference number: 5 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKLVSHG*AITARR
Trigger: TCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAG...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCTTGTCTCCCATGGCTaGGCTATCACCGCACGCCGA +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCLVSHG*AITARR
Trigger: TCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp AATGCTGAGCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: NAEHYSDPHFSILAWFSYLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...ATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp ATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCATCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: MRIFLMGIHWNFLKLEISSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...TGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp ATCTCCAACAGTAACTTCCAAATGCTGAGCACTACTCCGATCCACATTTTTCAATCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ISNSNFQMLSTTPIHIFQSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...TTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327791.8
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATTTAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGFNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...AAATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551268.5
CDS-3UTR CAA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTTCGCACATCATGCACTaGAAGGCCTCGGCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSSHIMH*KASALF
Trigger: GAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGA...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp CATGAGAATCTTCCTGATGGGCATCCACTGGAACTTCCTGAAATTGGAAATTTCAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: HENLPDGHPLELPEIGNFNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...GAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCCCATCAGGAAGATTCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546726.5
ENST00000547254.5
ENST00000551268.5
CDS-3UTR CAA 90 bp CTTAATCTCCATGCTACACCGTGTTCCCGTCTATGTAGAAAGATGAGTATCTTCAGAGCTAGAGCCGCTTaGACTGTGTTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LNLHATPCSRLCRKMSIFRARAA*TVLICR
Trigger: TCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCT...GAAGATACTCATCTTTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp CACAAACTGCTGAGTAACCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTAACTTTAAATTCACCTaGAATCTTGGGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: HKLLSNLLCNQLGDRSRFNFKFT*NLGKLF
Trigger: GAAGAGCTTCCCAAGATTCAAGGTGAATTTAAAGTT...AAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CAA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNLVGLF*SPMAWL
Trigger: TAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAG...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp CCTGCTGTGCAACCAACTGGGAGACAGGTCGAGGTTTCAAATGACAATCTTTTACCACATTTTTCAATCTaGGCCTGGTTTTCTTATGGC +
Preference number: 5 (lower is better)
Translates to: PAVQPTGRQVEVSNDNLLPHFSI*AWFSYG
Trigger: GCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGG...TAAAAGATTGTCATTTGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCGCCGCTTTGACTGTGTaGATCTGCAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCAALTV*ICRSST
Trigger: AGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGC...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTAAGGTGGGAGGATTCCTaGAACCTGGGAGTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVRWEDS*NLGVRG
Trigger: GCCTCGAACTCCCAGGTTCAAGGAATCCTCCCACCT...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATGTAATCCCAGCACTTaGGGAAGCCGACGCAGACGG +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVCNPST*GSRRRR
Trigger: CCGTCTGCGTCGGCTTCCCAAAGTGCTGGGATTACA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR CAA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAGCCGCTTTGACTGTGTaGATCTGCAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEAALTV*ICRSST
Trigger: AGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGC...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCAGAGCTAGAGCCGCTTaGACTGTGTTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCRARAA*TVLICR
Trigger: TCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCT...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCGAGATCTCACTGTGTaGCCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSRDLTV*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAACACAGTGAGATCTCG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp ACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTTAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACA +
Preference number: 5 (lower is better)
Translates to: TPIHIFQSWPGFLMAILFNFNGS*VLEALT
Trigger: TGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATT...AAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS-3UTR CAA 90 bp GCACTACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCCCACATTTTTCAATCTaGGCCTGGTTTTCTTATGGC +
Preference number: 5 (lower is better)
Translates to: ALLRSTFFNLGLVFLWLFPHFSI*AWFSYG
Trigger: GCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGG...GAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547351.5
ENST00000552109.5
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATA +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCPRPLC*SIRRII
Trigger: TATTATCCTCCTTATTGACAAACAGAGCGGTCGCGG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380790.4
CDS-3UTR CAA 90 bp CAATCAATATCTTCTCTAGTAACAATACCCTGTTCCACACTGTTCTATACAAACAGGCATGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: QSISSLVTIPCSTLFYTNRHENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCATGCCT...GTTTGTATAGAACAGTGTGGAACAGGGTATTGTTACTAGAGAAGATATTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp CAACGGTTCCTTGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCTTGTTATCTCAGTAACTaGAGTTATCCTATTGGGTCT +
Preference number: 5 (lower is better)
Translates to: QRFLGPRGTHNNFKQCGSCYLSN*SYPIGS
Trigger: AGACCCAATAGGATAACTCAAGTTACTGAGATAACA...AGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546726.5
CDS-3UTR CAA 90 bp GATATGAACCCAGGTTACCAAAATCATACTAGTGTAACATCTAGCACTCTTTCTCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATA +
Preference number: 5 (lower is better)
Translates to: DMNPGYQNHTSVTSSTLSPRPLC*SIRRII
Trigger: TATTATCCTCCTTATTGACAAACAGAGCGGTCGCGG...AGAAAGAGTGCTAGATGTTACACTAGTATGATTTTGGTAACCTGGGTTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp ATTTTAACGTCAGTTCTGTTTATGGAATTTGGGTCTGTTTTCCTGGTGTGGAAGCCACATTTTTCAATCTaGGCCTGGTTTTCTTATGGC +
Preference number: 5 (lower is better)
Translates to: ILTSVLFMEFGSVFLVWKPHFSI*AWFSYG
Trigger: GCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGG...CTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCCCACATTTTTCAATCTaGGCCTGGTTTTCTTATGGC +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCPHFSI*AWFSYG
Trigger: GCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGG...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327791.8
ENST00000380790.4
ENST00000534854.7
ENST00000552109.5
CDS-3UTR CAA 90 bp TTAACTGCAGAGACCAAAATGTTAAGTCTGGAAATGTTTGGTAGGCATCATTGCTGGCCCTGGATAAGTTaGGGACAAGAAAACAATGAT +
Preference number: 5 (lower is better)
Translates to: LTAETKMLSLEMFGRHHCWPWIS*GQENND
Trigger: ATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCA...GCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTATGCAGCTATCCAGTCTaGGCTTTAGTACTTGCCAAC +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVCSYPV*ALVLAN
Trigger: GTTGGCAAGTACTAAAGCCAAGACTGGATAGCTGCA...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTCATTACCTGTTACATTaGAAAGCCTGGTATGAACCA +
Preference number: 5 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAHYLLH*KAWYEP
Trigger: TGGTTCATACCAGGCTTTCAAATGTAACAGGTAATG...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp ATGCTCTATGACAAAAAGACTAGCTCTGCTTGCAAGACAAACTACACATGTGCTTGGCATCGTATATTTTaGCAAACCTCTAACATCTGG +
Preference number: 5 (lower is better)
Translates to: MLYDKKTSSACKTNYTCAWHRIF*QTSNIW
Trigger: CCAGATGTTAGAGGTTTGCAAAAATATACGATGCCA...AGCACATGTGTAGTTTGTCTTGCAAGCAGAGCTAGTCTTTTTGTCATAGAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACCCTCAGACTACACTTaGAAAACCACTCTGATATCC +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVPSDYT*KTTLIS
Trigger: GGATATCAGAGTGGTTTTCAAAGTGTAGTCTGAGGG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAGTTTCCTTCCTGAAATaGGAAATTTCAACGGTTCCT +
Preference number: 5 (lower is better)
Translates to: FKLISILQQDSNMRCQLAVSFLK*EISTVP
Trigger: AGGAACCGTTGAAATTTCCAATTTCAGGAAGGAAAC...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS-3UTR CAA 90 bp ACTGAGAAATGTGTAAACTGGCAGCTGTGTCTGAAAATAGGGTACTATGATTTTCTTTTTGTATGGAATTaGGCTAAAAGAACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: TEKCVNWQLCLKIGYYDFLFVWN*AKRTQC
Trigger: GCACTGGGTTCTTTTAGCCAAATTCCATACAAAAAG...AAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAACTTTTTGTATGGAATTaGGCTAAAAGAACCCAGTGC +
Preference number: 5 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMELFVWN*AKRTQC
Trigger: GCACTGGGTTCTTTTAGCCAAATTCCATACAAAAAG...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACAACTACTGAAACTTTaGCTTCTCAACACCGTTCTG +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVQLLKL*LLNTVL
Trigger: CAGAACGGTGTTGAGAAGCAAAAGTTTCAGTAGTTG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp TTTAAGCTCATTTCCATTCTACAACAGGATTCAAACATGAGGTGTCAGTTAGCAGAAAACAGATTTATTTaGGCTTATGAGTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: FKLISILQQDSNMRCQLAENRFI*AYESKG
Trigger: GCCTTTGGACTCATAAGCCAAAATAAATCTGTTTTC...TGCTAACTGACACCTCATGTTTGAATCCTGTTGTAGAATGGAAATGAGCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp AATTCATTTCTCCAATCTCATAGTGCACACCCACCAGGTTCTTTAATTATGGAAGAAAACAGATTTATTTaGGCTTATGAGTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: NSFLQSHSAHPPGSLIMEENRFI*AYESKG
Trigger: GCCTTTGGACTCATAAGCCAAAATAAATCTGTTTTC...TTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGATTGGAGAAATGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327791.8
ENST00000534854.7
CDS-3UTR CAA 90 bp AGTAATGTTTCCACCACTAAAAATTGGATCTACAAGAGCTTAGATGTACTGGTACTTAACCACTGTACTTaGGTATACAGTAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: SNVSTTKNWIYKSLDVLVLNHCT*VYSRSA
Trigger: AGCACTTCTACTGTATACCAAAGTACAGTGGTTAAG...TACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555248.2
CDS-3UTR CAA 90 bp ACTCCGATCCACATTTTTCAATCTTGGCCTGGTTTTCTTATGGCTATTCTTTTTTATCTCTTCCTGAAATaGGAAATTTCAACGGTTCCT +
Preference number: 5 (lower is better)
Translates to: TPIHIFQSWPGFLMAILFYLFLK*EISTVP
Trigger: AGGAACCGTTGAAATTTCCAATTTCAGGAAGAGATA...AAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS GCA 72 bp CCTCATCCGAGGACGGCTTCGGCTGCCGCTTCGGCCTaGAGGACACAACCCGGACACGACGCGGCGCGGGGT +
Preference number: 6 (lower is better)
Translates to: PHPRTASAAASA*RTQPGHDAARG
Trigger: ACCCCGCGCCGCGTCGTGTCCGGGTTGTGTCCTGCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546782.1
ENST00000547724.1
ENST00000548917.1
CDS CAA 72 bp GGCTTCGGCTGCCGCTTCGGCCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTATCACCGCACGCCGAG +
Preference number: 6 (lower is better)
Translates to: GFGCRFGLVGLF*SPMAWLSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327791.8
ENST00000534854.7
ENST00000541702.2
ENST00000547254.5
ENST00000547351.5
ENST00000551268.5
ENST00000552109.5
ENST00000552928.5
ENST00000555248.2
CDS CAA 90 bp TTGGCTATCACCGCACGCCGAGAGTCGCCGCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATAAGCCGGGCGGAAGCGGGCGGGGGA +
Preference number: 6 (lower is better)
Translates to: LAITARRESPPRPLC*SIRRIISRAEAGGG
Trigger: TCCCCCGCCCGCTTCCGCCCGGCTTATTATCCTCCTTATTGACAAACAGAGCGGTCGCGGCGGCGACTCTCGGCGTGCGGTGATAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380790.4
ENST00000547254.5
ENST00000548661.5
ENST00000555248.2
CDS CAA 72 bp ACCGCACGCCGAGAGTCGCCGCCGCGACCGCTCTGTTaGTCAATAAGGAGGATAATAAGCCGGGCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: TARRESPPRPLC*SIRRIISRAEA
Trigger: CGCTTCCGCCCGGCTTATTATCCTCCTTATTGACAAACAGAGCGGTCGCGGCGGCGACTCTCGGCGTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380790.4
ENST00000547254.5
ENST00000548661.5
ENST00000555248.2
CDS CAA 72 bp TGGGAGACAGGTCGAGGTTTCCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTATCACCGCACGCCGAG +
Preference number: 6 (lower is better)
Translates to: WETGRGFLVGLF*SPMAWLSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAGGAAACCTCGACCTGTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380790.4
CDS TCA 72 bp CCTCACCGCAAACCATCGCCTGGGTTGCGATCAATGTaGCCCAGTTCCTATCGCCACAGCCACCTCCGTCTG +
Preference number: 6 (lower is better)
Translates to: PHRKPSPGLRSM*PSSYRHSHLRL
Trigger: CAGACGGAGGTGGCTGTGGCGATAGGAACTGGGTCACATTGATCGCAACCCAGGCGATGGTTTGCGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547622.5
CDS CCA 72 bp ACAGGTCGAGGTTTCCCCTCACCGCAAACCATCGCCTaGGTTGCGATCAATGTGACCCAGTTCCTATCGCCA +
Preference number: 6 (lower is better)
Translates to: TGRGFPSPQTIA*VAINVTQFLSP
Trigger: TGGCGATAGGAACTGGGTCACATTGATCGCAACCCAGGCGATGGTTTGCGGTGAGGGGAAACCTCGACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547622.5
CDS GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCGGGT +
Preference number: 6 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPG
Trigger: ACCCGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534854.7
ENST00000548917.1
CDS GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPL
Trigger: GAGGGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547622.5
CDS GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPS
Trigger: GGAAGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS GCA 72 bp CTGTGTAGGAGGCACAAACTGCTGAGTAACCTGCTGTaGAACCAACTGGGAGACAGGTCGAGGTTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: LCRRHKLLSNLL*NQLGDRSRFPG
Trigger: ACCAGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380790.4
CDS CAA 72 bp ATAACTTCAAACAATGTGGATCTGGTGGGGCTCTTCTaGTCTCCCATGGCTTGGCTATCACCGCACGCCGAG +
Preference number: 6 (lower is better)
Translates to: ITSNNVDLVGLF*SPMAWLSPHAE
Trigger: CTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAGATCCACATTGTTTGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548661.5
CDS CAA 90 bp AAGAGAATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACCAGGCTCTCTTCCTGTTATCTCGGG +
Preference number: 6 (lower is better)
Translates to: KRMTQISRQRLEPAG*FHQMVTRLSSCYLG
Trigger: CCCGAGATAACAGGAAGAGAGCCTGGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCATTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547724.1
ENST00000552109.5
CDS CAA 90 bp AAGAGAATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACCAGGCTCTCTTCCTGTTATCTCTGG +
Preference number: 6 (lower is better)
Translates to: KRMTQISRQRLEPAG*FHQMVTRLSSCYLW
Trigger: CCAGAGATAACAGGAAGAGAGCCTGGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCATTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546972.5
CDS CAA 90 bp AAGAGAATGACCCAAATTTCTAGGCAGAGGCTTGAGCCAGCAGGATaGTTCCACCAAATGGTAACCAGGCTCTCTTCCTGTTATCTCTTC +
Preference number: 6 (lower is better)
Translates to: KRMTQISRQRLEPAG*FHQMVTRLSSCYLF
Trigger: GAAGAGATAACAGGAAGAGAGCCTGGTTACCATTTGGTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCATTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS CAA 90 bp ACAGGTCGAGGTTTCCTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCGG +
Preference number: 6 (lower is better)
Translates to: TGRGFLPEIGNFNGS*VLEALTITSNNVDR
Trigger: CCGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGGAAACCTCGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS CAA 90 bp CTCTTCCTGTTATCTCTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAATGTGGATCGG +
Preference number: 6 (lower is better)
Translates to: LFLLSLPEIGNFNGS*VLEALTITSNNVDR
Trigger: CCGATCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGAGATAACAGGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5
CDS CCA 72 bp CACCAAATGGTAACCAGGCTCTCTTCCTGTTATCTCTaGCAAAAGGGTTACAGAGTAAGAAAGAAACACTAT +
Preference number: 6 (lower is better)
Translates to: HQMVTRLSSCYL*QKGYRVRKKHY
Trigger: ATAGTGTTTCTTTCTTACTCTGTAACCCTTTTGCCAGAGATAACAGGAAGAGAGCCTGGTTACCATTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546972.5
CDS CAA 72 bp GGTTTCCTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAAT +
Preference number: 6 (lower is better)
Translates to: GFLPEIGNFNGS*VLEALTITSNN
Trigger: ATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327791.8
CDS CAA 72 bp TTATCTCTTCCTGAAATTGGAAATTTCAACGGTTCCTaGGTCCTCGAGGCACTCACAATAACTTCAAACAAT +
Preference number: 6 (lower is better)
Translates to: LSLPEIGNFNGS*VLEALTITSNN
Trigger: ATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547351.5