RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XXYLT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173950

Ensembl transcript IDs: ENST00000310380.11, ENST00000356740.5, ENST00000418940.5, ENST00000429994.5, ENST00000437101.5, ENST00000455281.1, ENST00000460582.1, ENST00000473200.1, ENST00000476897.5, ENST00000491138.1, ENST00000494175.1, ENST00000496644.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTaGCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGC +
Preference number: 1 (lower is better)
Translates to: QCTGQSLAGGLSTVT*PAGGLSTLITGLPC
Trigger: GCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR GCA 90 bp ACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTaGGGTGTCTCTCTAGCGGGTCAGACACTGCCCTTGGGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: TCPAGGLSTLITGLP*GVSLAGQTLPLGLS
Trigger: GGACAGACCCAAGGGCAGTGTCTGACCCGCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR TCA 90 bp AGAATGTGTGCCTGTAAACTGGCTGCATCTCCCGGGCTATGCCGATaGTGGCGCCTGGCAGGAAACTGTCAAATTCCTCAAACAACTCCC +
Preference number: 1 (lower is better)
Translates to: RMCACKLAASPGLCR*WRLAGNCQIPQTTP
Trigger: GGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR TCA 90 bp AGAGGAAGAAGATGGAGTCACTGTAGTAGGTTCCCAAGCCAGCACTaGAGTGCTTCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCG +
Preference number: 1 (lower is better)
Translates to: RGRRWSHCSRFPSQH*SASAWPPRWGRAYP
Trigger: CGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
3UTR-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGCTCAGCACAGTGACCTaGCCGGCAGGAGGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRLSTVT*PAGGLS
Trigger: GCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAG...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCCAGTCCTTGGCGGGTaGCCTCAGCACAGTGACCTG +
Preference number: 2 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRPVLGG*PQHSDL
Trigger: CAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGGTGTCGCCTGCTCCCTaGAGGAATAAGGTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRVSPAP*RNKVPS
Trigger: GCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACAC...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CCA 90 bp GCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCCCGGCAGCCCATCTGCAGGATCTCTTaGAAAGTGGGACCGACAGAC +
Preference number: 2 (lower is better)
Translates to: AHGLQVQQHHPAVEARQPICRIS*KVGPTD
Trigger: GTCTGTCGGTCCCACTTTCCAAGAGATCCTGCAGAT...GGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR-3UTR CCA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGCCAGTCCTTGGCGGGTaGCCTCAGCACAGTGACCTG +
Preference number: 2 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKPVLGG*PQHSDL
Trigger: CAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGG...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR GCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTTCCTTCTCTTCAAGTaGTTGCTTCCCAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRFLLFK*LLPSPL
Trigger: CAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAA...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR GCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTTCCTTCTCTTCAAGTaGTTGCTTCCCAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMFLLFK*LLPSPL
Trigger: CAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAA...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CCA 90 bp TCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTTTTGCACAGGCCAGTCCTTaGCGGGTGGCCTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: SSKPTWSHLGIAGFLFGFAQASP*RVASAQ
Trigger: CTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGC...AAAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR-3UTR GCA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTCCAGCCCACTGGACATaGGTGTCCTTTGTGTCGCCT +
Preference number: 2 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGPAHWT*VSFVSP
Trigger: AGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR-3UTR TCA 90 bp GATGATGGCGCCTGGCAGGAAACTGTCAAATTCCTCAAACAACTCCCGGATGTTCTAGGTCCAGCTGAATaGTCTGCAGGATCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: DDGAWQETVKFLKQLPDVLGPAE*SAGSLG
Trigger: TCCAAGAGATCCTGCAGATCATTCAGCTGGACCTAG...AACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR-3UTR CCA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTCACCTGGAGCTGGTTTaGTGGAATAAAGGACAATGG +
Preference number: 2 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGHLELV*WNKGQW
Trigger: CCATTGTCCTTTATTCCACCAAACCAGCTCCAGGTG...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR-3UTR CCA 90 bp TCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTTTTCTGGTCACCTGGAGCTaGTTTGGTGGAATAAAGGAC +
Preference number: 2 (lower is better)
Translates to: SSKPTWSHLGIAGFLFGFLVTWS*FGGIKD
Trigger: GTCCTTTATTCCACCAAACCAGCTCCAGGTGACCAG...AAAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR-3UTR CCA 90 bp AGGAAACTGTCAAATTCCTCAAACAACTCCCGGATGTTGGTCTTAAACTTCAGGGGATCTCTTGGAAAGTaGGACCGACAGACAGGCCTT +
Preference number: 2 (lower is better)
Translates to: RKLSNSSNNSRMLVLNFRGSLGK*DRQTGL
Trigger: AAGGCCTGTCTGTCGGTCCCACTTTCCAAGAGATCC...CCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR-3UTR GCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTTTCTCTTCAAGTGCTTaGTTCCCAGCCCACTGGACA +
Preference number: 2 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCFSSSA*FPAHWT
Trigger: TGTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAA...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR GCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATTCGTCCAGGCTGGAGTaGAGTGGTGTGATCACAGCT +
Preference number: 2 (lower is better)
Translates to: IKRNDALISAKVYGLTWYSSRLE*SGVITA
Trigger: AGCTGTGATCACACCACTGCACTCCAGCCTGGACGA...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR-3UTR GCA 90 bp ATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAAATGAGAAGTGTCACTaGAACTTCAACACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: MGKSLSVSTATSWKMTLRNEKCH*NFNTSR
Trigger: TCTGGAAGTGTTGAAGTTGCAGTGACACTTCTCATT...TCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
3UTR GCA 72 bp GGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTaGCCGGCAGGAGGTCTCAGCACCTTAATCACAGGA +
Preference number: 3 (lower is better)
Translates to: GQSLAGGLSTVT*PAGGLSTLITG
Trigger: TCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CAA 90 bp CCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCCTGTAGATCTGCAGGATCTCTaGGAAAGTGGGACCGACAGA +
Preference number: 3 (lower is better)
Translates to: PNPGLGVLMAELPECVPVDLQDL*ESGTDR
Trigger: TCTGTCGGTCCCACTTTCCAAGAGATCCTGCAGATC...TACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR CCA 72 bp CACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTaGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAG +
Preference number: 3 (lower is better)
Translates to: HWTCVSFVSPAP*RNKVPSTSSAQ
Trigger: CTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR CCA 72 bp CCTTCCTTCTCTTCAAGTGCTTGCTTCCCAGCCCACTaGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: PSFSSSACFPAH*TCVSFVSPAPW
Trigger: CCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR CCA 72 bp CTGTGCCCGGCCTGGGCTTTTTGGAATGAGTCTTCCTaGTCCCGACAGTTCTCCTGCATGTCCTTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LCPAWAFWNESS*SRQFSCMSLWW
Trigger: CCACCACAAGGACATGCAGGAGAACTGTCGGGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR-3UTR CAA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACGGACATGCGTGTCCTTaGTGTCGCCTGCTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDGHACP*CRLLPG
Trigger: TCCAGGGAGCAGGCGACACAAAGGACACGCATGTCC...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR TCA 72 bp GCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTaGGTATGTGATGGGCTGGCATTCGTTTGGAAGCTT +
Preference number: 3 (lower is better)
Translates to: ASGECACSSLPG*VCDGLAFVWKL
Trigger: AAGCTTCCAAACGAATGCCAGCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR CCA 72 bp CGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCTaGCATTCGTTTGGAAGCTTAGATACTGGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: RAAASQGEYVMG*HSFGSLDTGLV
Trigger: GACCAGCCCAGTATCTAAGCTTCCAAACGAATGCCAGCCCATCACATACTCACCCTGGGAGGCTGCTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR TCA 72 bp GCCTGTAAACTGGCTGCATCTCCCGGGCTATGCCGATaGTGGCGCCTGGCAGGAAACTGTCAAATTCCTCAA +
Preference number: 3 (lower is better)
Translates to: ACKLAASPGLCR*WRLAGNCQIPQ
Trigger: TTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR GCA 72 bp TTCTCTTCAAGTGCTTGCTTCCCAGCCCACTGGACATaGGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: FSSSACFPAHWT*VSFVSPAPWRN
Trigger: ATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR TCA 72 bp AGATGGAGTCACTGTAGTAGGTTCCCAAGCCAGCACTaGAGTGCTTCTGCATGGCCTCCACGATGGGGAAGA +
Preference number: 3 (lower is better)
Translates to: RWSHCSRFPSQH*SASAWPPRWGR
Trigger: TCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
3UTR TCA 72 bp CGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCTTGGAAAGTGGGACCG +
Preference number: 3 (lower is better)
Translates to: RMLVLNFRSRSS*MICRISWKVGP
Trigger: CGGTCCCACTTTCCAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
3UTR CCA 72 bp GGCTGGTCATTAAAACCTTGGCTTACCTTACCCGTTTaGGGCTCGATGGGTGCTAAAGCAGTTCTGTTTGTA +
Preference number: 3 (lower is better)
Translates to: GWSLKPWLTLPV*GSMGAKAVLFV
Trigger: TACAAACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGGGTAAGGTAAGCCAAGGTTTTAATGACCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR TCA 72 bp TTTTTAAACAAAGAAACTAGAATGCTTACTAGCCCATaGGTGACATGTCTTCCAAGCCCACATGGTCACACT +
Preference number: 3 (lower is better)
Translates to: FLNKETRMLTSP*VTCLPSPHGHT
Trigger: AGTGTGACCATGTGGGCTTGGAAGACATGTCACTCATGGGCTAGTAAGCATTCTAGTTTCTTTGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp GGCGGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGACATCACCCCGCTGTTaGAGCCCGGCAGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGPPTRVWGFSWRNCQNVTSPRC*SPAAPR
Trigger: CCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGT...CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR GCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGACTCAGCACAGTGACCTaGCCGGCAGGAGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGLSTVT*PAGGLS
Trigger: GCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAG...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGACCAGTCCTTGGCGGGTaGCCTCAGCACAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGPVLGG*PQHSDL
Trigger: CAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGG...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGAACATCACCCCGCTGTTaGAGCCCGGCAGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRTSPRC*SPAAPR
Trigger: CCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGT...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGAACGCGGGCCTTGGCCTaGAGCGCGGCATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRTRALA*SAALCS
Trigger: GGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGT...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGGCGCGACGCGGGCCTTaGCCTGCAGCGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRARRGP*PAARHC
Trigger: ACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGC...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCGCGGGGACTGGCGCATaGCCTCCAGGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GPPTRVWGFSWRNCQNVCAGTGA*PPGSAT
Trigger: TGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGC...GCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp AGCGGGGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCCCGGGCTATGCCGATaGTGGCGCCTGGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGDWRMASRFSNITPLLKPGLCR*WRLAGN
Trigger: GTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGG...CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGACCATGCCGATCATGGTaGAGAAGTCCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGPCRSW*RSPGPR
Trigger: TCGGGGACCAGGACTTCTTCACCATGATCGGCATGG...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGACTCGGAGGAGGCCCATaGGCTACGAGACCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGLGGGP*ATRPRR
Trigger: GCGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAG...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRGPSTR*TAAGSR
Trigger: CCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGAATGTCTTCCTTCGGCTaGAGCCTCGCCGATTCCCGA +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGMSSFG*SLADSR
Trigger: TCGGGAATCGGCGAGGCTGCAGCCGAAGGAAGACAT...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGCATGGCCCGAGCGCATaGGAGCCCGCCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKHGPSA*EPASEE
Trigger: CTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATG...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGCCCCCAACCCGGGTCTaGGGGTTCTCATGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRPPTRV*GFSWRN
Trigger: GTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGG...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGCACAGGCCAGTCCTTaGCGGGTGGCCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRAQASP*RVASAQ
Trigger: CTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGATTCCCAAGCCAGCACTaGAGTGCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGFPSQH*SASAWP
Trigger: AGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAA...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCCCGGGCTATGCCGATaGTGGCGCCTGGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGPGLCR*WRLAGN
Trigger: GTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGATGGAAGAGCTTGGGGTaGTCCATGCCGATCATGGTG +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGWKSLG*SMPIMV
Trigger: CACCATGATCGGCATGGAGCACCCCAAGCTCTTCCA...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACAGGGCCTCAGCCACTaGTCCCCTGGAAGCCACATG +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRQGLSH*SPGSHM
Trigger: CATGTGGCTTCCAGGGGAGCAGTGGCTGAGGCCCTG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp TGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGCGCCCTCCAAGCTCTTaGCCTTCGCGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CMASTMGKSLSVSTATSWRPPSS*PSRRGL
Trigger: CAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCG...CCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCGTGCGCCTCGAACTTaGCGAGGCGCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGRAPRT*RGAAVS
Trigger: GCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GTGACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTTGGCCACCTCGCGGCTaGCCTCCTCGCTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: VTCPAGGLSTLITGLPCGWPPRG*PPRSRS
Trigger: ACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTGGCCA...ACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGCCCGCAGCAGGCCCTTaGCCACCTCGCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASTMGKSLSVSTATSWKMPAAGP*PPRGWP
Trigger: AGGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGG...CATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCCCCCAACCCGGGTCTaGGGGTTCTCATGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRPPTRV*GFSWRN
Trigger: GTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCCTGTACCCCCAACCCGGGTCTaGGGGTTCTCATGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PNPGLGVLMAELPECVPVPPTRV*GFSWRN
Trigger: GTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGG...TACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGCCCGGGCTATGCCGATaGTGGCGCCTGGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKPGLCR*WRLAGN
Trigger: GTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGG...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACTGTGTTTCCCAGGCTaGTCTCGACCTCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRLCFPG*SRPPRL
Trigger: GAGCCTCGGAGGTCGAGATCAGCCTGGGAAACACAG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCTACTTGTCGGCCAGCTaGTGCACCTGCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSYLSAS*CTCAGS
Trigger: GGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTA...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSGPSTR*TAAGSR
Trigger: CCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACC...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGGCCTCTTGGTGGCGCTaGAGAAGGTCTCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMASWWR*RRSPGL
Trigger: CAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGC...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GTGACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTTCCTGGTCCCCGAGGTaGCCGCGGAAGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: VTCPAGGLSTLITGLPCGSWSPR*PRKWYL
Trigger: CAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGA...ACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GGCGGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGGGATCTCTTGGAAAGTaGGACCGACAGACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGPPTRVWGFSWRNCQNVGSLGK*DRQTGL
Trigger: AAGGCCTGTCTGTCGGTCCCACTTTCCAAGAGATCC...CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACGCACTCTGCCTTCCTaGATCCTTGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRRTLPS*ILAARW
Trigger: CCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR TCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGGAAGGTCTCCCGGCCTaGGCCGAGGTAGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMEGLPA*AEVVEG
Trigger: GCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTC...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp GGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCCCGGTTCCCAAGCCAGCACTaGAGTGCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GLAHGLQVQQHHPAVEARFPSQH*SASAWP
Trigger: AGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAA...CCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp GGCGGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GGPPTRVWGFSWRNCQNVRSRSS*MICRIS
Trigger: AGAGATCCTGCAGATCATTCAGCTGGACCTAGACCT...CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGATCAAAGAGGCGATCCTaGAACCTACACCAAGTGACG +
Preference number: 4 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGSKRRS*NLHQVT
Trigger: CGTCACTTGGTGTAGGTTTCAGGATCGCCTCTTTGA...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGAGGTTAAGCACCTCGTaGGCCTCGAACTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRRLSTS*ASNLAR
Trigger: CCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCT...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp AGCGGGGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGGCACTGAAGTGCTTCTaGATGGCCTCCACGATGGGG +
Preference number: 4 (lower is better)
Translates to: SGDWRMASRFSNITPLLKALKCF*MASTMG
Trigger: CCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGC...CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCGCCCTCCAAGCTCTTaGCCTTCGCGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSRPPSS*PSRRGL
Trigger: CAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCCCGGGTCTGGGGGTTCTCATaGCGGAACTGCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: GLAHGLQVQQHHPAVEARVWGFS*RNCQNV
Trigger: CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGAC...CCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGAATGGTGAAGAAGTCCTaGTCCCCGAGGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGMVKKS*SPRWPR
Trigger: CCGCGGCCACCTCGGGGACCAGGACTTCTTCACCAT...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGTGTCGCCTGCTCCCTaGAGGAATAAGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRVSPAP*RNKVPS
Trigger: GCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACAC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCCTGTACAGTTCTGCCTGGCTaGGGAGGCCTCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: PQPGSGGSHGGTARMCACTVLPG*GGLRKH
Trigger: GTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGT...ACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACACATCACCCCGCTGTTaGAGCCCGGCAGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDTSPRC*SPAAPR
Trigger: CCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGT...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGAGCAGCCTCCCAGGGTaGGTATGTGATGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKSSLPG*VCDGLA
Trigger: TGCCAGCCCATCACATACTCACCCTGGGAGGCTGCT...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACACAGCTCAGTGCAGTaGACTCCTGGACTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRHSSVQ*TPGLKP
Trigger: TGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp GACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCCCGGCTACACTCTTTGGGCATaGTCTGATGCATGGCGACCG +
Preference number: 4 (lower is better)
Translates to: DWRMASRFSNITPLLKPGYTLWA*SDAWRP
Trigger: CGGTCGCCATGCATCAGATCATGCCCAAAGAGTGTA...GCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR GCA 90 bp GATGCATGGCGACCGAGAGGAAGAAGATGGAGTCACTGTAGTAGGTTCCCAAGCACGCGGGCCTTGGCCTaGAGCGCGGCATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: DAWRPRGRRWSHCSRFPSTRALA*SAALCS
Trigger: GGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGT...GCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGAAGCCAGCACTGAAGTaGTTCTGCATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRKPALK*FCMAST
Trigger: CGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTT...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTTTGTCGGCCAGCTGCTaGACCTGCGCCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSLSASC*TCAGSS
Trigger: GCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAA...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGCACCAGGTGCACAGCTaGCGGTTCCAGGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMHQVHS*RFQVQS
Trigger: GGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACCGGGATGGGAGTGTTaGAGTTCCCGTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRPGWEC*SSRGRS
Trigger: AGATCTACCACGGGAACTGCAACACTCCCATCCCGG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCCAGCCCACTGGACATaGGTGTCCTTTGTGTCGCCT +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGPAHWT*VSFVSP
Trigger: AGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGTCGTCCAGGCTGGAGTaGAGTGGTGTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRSSRLE*SGVITA
Trigger: AGCTGTGATCACACCACTGCACTCCAGCCTGGACGA...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCCCCTGGAAGCCACATaGTCCAGATGGCGTCGTTAC +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRPLEAT*SRWRRY
Trigger: GTAACGACGCCATCTGGAGCATGTGGCTTCCAGGGG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp GCTTCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGCGCCTCGAACTTaGCGAGGCGCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ASAWPPRWGRAYPSAQQHRAPRT*RGAAVS
Trigger: GCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACG...ATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp CCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCCTGTGCATGGCCTCCACGATaGGGAAGAGCTTATCCGTCA +
Preference number: 4 (lower is better)
Translates to: PQPGSGGSHGGTARMCACAWPPR*GRAYPS
Trigger: TGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC...ACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCCTAGTCCTCCGGGATaGGAGTGTTGCAGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGPSPPG*ECCSSR
Trigger: ACGGGAACTGCAACACTCCCATCCCGGAGGACTAGG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCGTGTCGCCTGCTCCCTaGAGGAATAAGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGVSPAP*RNKVPS
Trigger: GCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACAC...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GGCGGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGAGCACAGCAACATCGTaGAAGATGACAGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPPTRVWGFSWRNCQNVSTATS*KMTVLP
Trigger: AGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCT...CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCTCCTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGC +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGSSLTK*RLSTSC
Trigger: GCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGA...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCCCATGCCGATCATGGTaGAGAAGTCCTGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSPCRSW*RSPGPR
Trigger: TCGGGGACCAGGACTTCTTCACCATGATCGGCATGG...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCGCACTGAAGTGCTTCTaGATGGCCTCCACGATGGGG +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSALKCF*MASTMG
Trigger: CCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGC...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTTACTTGTCGGCCAGCTaGTGCACCTGCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSYLSAS*CTCAGS
Trigger: GGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTA...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GCGGCTGTAGAGCGGGGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCCCGAGAGGAAGAAGATaGAGTCACTGTAGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: AAVERGLAHGLQVQQHHPPRGRR*SHCSRF
Trigger: GAACCTACTACAGTGACTCCATCTTCTTCCTCTCGG...GGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCGTCTGGGGGTTCTCATaGCGGAACTGCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGVWGFS*RNCQNV
Trigger: CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGAC...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCGCACATGGAAGAGCTTaGGGTGCTCCATGCCGATCA +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGAHGRA*GAPCRS
Trigger: TGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGC...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GTGACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGCACATGGAAGAGCTTaGGGTGCTCCATGCCGATCA +
Preference number: 4 (lower is better)
Translates to: VTCPAGGLSTLITGLPCGAHGRA*GAPCRS
Trigger: TGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGC...ACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GTGACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTACAGTCCAGCACATaGAAGAGCTTGGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTCPAGGLSTLITGLPCGVQSST*KSLGCS
Trigger: GGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTAC...ACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCCGGCCTGGGCTTTTTaGAATGAGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRPAWAF*NESSWS
Trigger: GGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGACTAGGTCCAGCTGAATaGTCTGCAGGATCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRLGPAE*SAGSLW
Trigger: CCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAG...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGAGCAGCCTCCCAGGGTaGGTATGTGATGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKSSLPG*VCDGLA
Trigger: TGCCAGCCCATCACATACTCACCCTGGGAGGCTGCT...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp AGCGGGGACTGGCGCATGGCCTCCAGGTTCAGCAACATCACCCCGCTGTTGAAGCTAGGTCCAGCTGAATaGTCTGCAGGATCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SGDWRMASRFSNITPLLKLGPAE*SAGSLG
Trigger: TCCAAGAGATCCTGCAGATCATTCAGCTGGACCTAG...CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCTGGCTGATGGACTATaGGCAGAAGTGCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGLADGL*AEVLCA
Trigger: TGCACACAGCACTTCTGCTCATAGTCCATCAGCCAG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR GCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGTGGAAGAGCTTGGGGTaGTCCATGCCGATCATGGTG +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKWKSLG*SMPIMV
Trigger: CACCATGATCGGCATGGAGCACCCCAAGCTCTTCCA...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGTGATCACAGCTCAGTaGAGTGAACTCCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRVITAQ*SELLDS
Trigger: TGAGTCCAGGAGTTCACTGCACTGAGCTGTGATCAC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGTCGTCCAGGCTGGAGTaGAGTGGTGTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKSSRLE*SGVITA
Trigger: AGCTGTGATCACACCACTGCACTCCAGCCTGGACGA...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGAAGGATCTCCGCACTCTaGCTTCCTGGATCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGRISAL*LPGSLQ
Trigger: CTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCT...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCCTGTATGTGTGCCTGTAAACTaGCTGCATCTCCCGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PNPGLGVLMAELPECVPVCVPVN*LHLPGY
Trigger: ATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACA...TACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACGCGGGGACTGGCGCATaGCCTCCAGGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDAGTGA*PPGSAT
Trigger: TGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGC...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACATGGTGAAGAAGTCCTaGTCCCCGAGGTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDMVKKS*SPRWPR
Trigger: CCGCGGCCACCTCGGGGACCAGGACTTCTTCACCAT...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GTGACCTGCCCGGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTCCGTTTGGGGCTCGATaGGTGCTAAAGCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VTCPAGGLSTLITGLPCGPFGAR*VLKQFC
Trigger: ACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGG...ACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCCGTTTGGGGCTCGATaGGTGCTAAAGCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRPFGAR*VLKQFC
Trigger: ACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGCTGGTCACCTGGAGCTaGTTTGGTGGAATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRLVTWS*FGGIKD
Trigger: GTCCTTTATTCCACCAAACCAGCTCCAGGTGACCAG...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGTCCTGCATGTCCTTGTaGTGGCCAGTCTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRSCMSL*WPVSVL
Trigger: AAGAACAGAGACTGGCCACCACAAGGACATGCAGGA...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp GCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGATCCTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGC +
Preference number: 4 (lower is better)
Translates to: AWPPRWGRAYPSAQQHRGSSLTK*RLSTSC
Trigger: GCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGA...TCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR TCA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCGGATCTCTTTGGGCATaGTCTGATGCATGGCGACCG +
Preference number: 4 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSGSLWA*SDAWRP
Trigger: CGGTCGCCATGCATCAGATCATGCCCAAAGAGATCC...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCTGTGTTTCCCAGGCTaGTCTCGACCTCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDLCFPG*SRPPRL
Trigger: GAGCCTCGGAGGTCGAGATCAGCCTGGGAAACACAG...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp CATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAATCAAAAACTTGCACTTaGAGCCAGCGGCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: HGLHDGEELIRQHSNIVESKTCT*SQRRAA
Trigger: TGCCGCCCGCCGCTGGCTTCAAGTGCAAGTTTTTGA...TTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR TCA 90 bp GCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGATCCAGTTGCTCAGGATaGCTACTGGTGACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AWPPRWGRAYPSAQQHRGSSCSG*LLVTSP
Trigger: GGGACTGGTCACCAGTAGTCATCCTGAGCAACTGGA...TCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp CATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAATGCAGCGCGGCATTGTaGTCCGCCTTGGTGAACATC +
Preference number: 4 (lower is better)
Translates to: HGLHDGEELIRQHSNIVECSAAL*SALVNI
Trigger: GATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCA...TTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp GCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGAGGTTAAGCACCTCGTaGGCCTCGAACTTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ASTMGKSLSVSTATSWKMRLSTS*ASNLAR
Trigger: CCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCT...CATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp GCATGGCGACCGAGAGGAAGAAGATGGAGTCACTGTAGTAGGTTCCCAAGCCAGGCACTGAAGTGCTTCTaGATGGCCTCCACGATGGGG +
Preference number: 4 (lower is better)
Translates to: AWRPRGRRWSHCSRFPSQALKCF*MASTMG
Trigger: CCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGC...CTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp CATCTCCCGGGCTATGCCGATGATGGCGCCTGGCAGGAAACTGTCAAATTCCTCAAGCCAGCACTGAAGTaGTTCTGCATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: HLPGYADDGAWQETVKFLKPALK*FCMAST
Trigger: CGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTT...GAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR GCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCACCAGGTGCACAGCTaGCGGTTCCAGGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSHQVHS*RFQVQS
Trigger: GGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCCTTCAGCCTCTTGGTaGCGCTGGAGAAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSPSASW*RWRRSP
Trigger: GGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAGCAATGAGAAGGCGCGACGCGGGCCTTaGCCTGCAGCGCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LIRQHSNIVEDDLKSNEKARRGP*PAARHC
Trigger: ACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGC...CTTCTCATTGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp TGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGGCATGGCCTCCACGATaGGGAAGAGCTTATCCGTCA +
Preference number: 4 (lower is better)
Translates to: CMASTMGKSLSVSTATSWAWPPR*GRAYPS
Trigger: TGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC...CCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGTGTGTGCCTGTAAACTaGCTGCATCTCCCGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKCVPVN*LHLPGY
Trigger: ATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACA...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGATGTGTGCCTGTAAACTaGCTGCATCTCCCGGGCTAT +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGCVPVN*LHLPGY
Trigger: ATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACA...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGGCACAGGCCAGTCCTTaGCGGGTGGCCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HVFQAHMVTLGNCWVPFWAQASP*RVASAQ
Trigger: CTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGC...CCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCTTACCTTACCCGTTTaGGGCTCGATGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRLTLPV*GSMGAK
Trigger: TTTAGCACCCATCGAGCCCCAAACGGGTAAGGTAAG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGCTGGAGCTGGTTTGGTaGAATAAAGGACAATGGGGT +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRLELVW*NKGQWG
Trigger: ACCCCATTGTCCTTTATTCCACCAAACCAGCTCCAG...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCTGGAATGAGTCTTCCTaGTCCCGACAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSWNESS*SRQFSC
Trigger: GCAGGAGAACTGTCGGGACCAGGAAGACTCATTCCA...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGTGATGGGCCTATGCTCCTCTTCCTaGCTCCAGAAACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EHQENARAAASQGEYVMGLCSSS*LQKQGL
Trigger: GAGACCTTGTTTCTGGAGCCAGGAAGAGGAGCATAG...GCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCGCCACATGCTCCAGATaGCGTCGTTACAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSATCSR*RRYRME
Trigger: TTCCATCCTGTAACGACGCCATCTGGAGCATGTGGC...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR TCA 90 bp CATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAATTCCCAAGCCAGCACTaGAGTGCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HGLHDGEELIRQHSNIVEFPSQH*SASAWP
Trigger: AGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAA...TTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR TCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKRSRSS*MICRIS
Trigger: AGAGATCCTGCAGATCATTCAGCTGGACCTAGACCT...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACTGCAGCGCGGCATTGTaGTCCGCCTTGGTGAACATC +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDCSAAL*SALVNI
Trigger: GATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCA...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp ACTGAAGTGCTTCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAAGCCAGCACTGAAGTaGTTCTGCATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: TEVLLHGLHDGEELIRQHKPALK*FCMAST
Trigger: CGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTT...GTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGCCGGGATGGGAGTGTTaGAGTTCCCGTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKPGWEC*SSRGRS
Trigger: AGATCTACCACGGGAACTGCAACACTCCCATCCCGG...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGAGTGATCACAGCTCAGTaGAGTGAACTCCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGVITAQ*SELLDS
Trigger: TGAGTCCAGGAGTTCACTGCACTGAGCTGTGATCAC...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGTCCCGAGCTGTTTCCTaGTGCTTTTCTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRSRAVS*CFSHFM
Trigger: CATGAAATGAGAAAAGCAGCAGGAAACAGCTCGGGA...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp TCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGTCTCCCAAAGTGTTGGGATCCTGCATGTCCTTGTaGTGGCCAGTCTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: STSEAQSIPPPRSPKVLGSCMSL*WPVSVL
Trigger: AAGAACAGAGACTGGCCACCACAAGGACATGCAGGA...TCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCCCAGGGTGAGTATGTaGTGGGCTGGCATTCGTTTG +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSPRVSM*WAGIRL
Trigger: CAAACGAATGCCAGCCCATCACATACTCACCCTGGG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCCAGGGTGAGTATGTaGTGGGCTGGCATTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDPRVSM*WAGIRL
Trigger: CAAACGAATGCCAGCCCATCACATACTCACCCTGGG...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCACAGCTCAGTGCAGTaGACTCCTGGACTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDHSSVQ*TPGLKP
Trigger: TGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTG...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAGCAATGAGAAGTGGCCACCTCGCGGCTaGCCTCCTCGCTCACGAAGT +
Preference number: 4 (lower is better)
Translates to: LIRQHSNIVEDDLKSNEKWPPRG*PPRSRS
Trigger: ACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTGGCCA...CTTCTCATTGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACGTACAGTCCAGCACATaGAAGAGCTTGGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDVQSST*KSLGCS
Trigger: GGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTAC...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTTGCTTCCCAGCCCACTaGACATGCGTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSCFPAH*TCVSFV
Trigger: CACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCA...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGCACCTGGAGCTGGTTTaGTGGAATAAAGGACAATGG +
Preference number: 4 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMHLELV*WNKGQW
Trigger: CCATTGTCCTTTATTCCACCAAACCAGCTCCAGGTG...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGCCACATGGTCACACTTaGGAATTGCTGGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMPHGHT*ELLGSF
Trigger: AAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGG...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp TCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCCAGGATGACTACTGGTaGCCAGTCCCATCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: STMGKSLSVSTATSWKMTQDDYW*PVPSSE
Trigger: TTCTGAGGATGGGACTGGTCACCAGTAGTCATCCTG...GGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTTTGTCGGCCAGCTGCTaGACCTGCGCCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCLSASC*TCAGSS
Trigger: GCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAA...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCAGCACAGCAACATCGTaGAAGATGACCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSSTATS*KMTLHL
Trigger: CAAGTGCAAGGTCATCTTCCACGATGTTGCTGTGCT...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCCCGAGAGGAAGAAGATaGAGTCACTGTAGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSPRGRR*SHCSRF
Trigger: GAACCTACTACAGTGACTCCATCTTCTTCCTCTCGG...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp GCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGACCGAGAGGAAGAAGATaGAGTCACTGTAGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: AWPPRWGRAYPSAQQHRGPRGRR*SHCSRF
Trigger: GAACCTACTACAGTGACTCCATCTTCTTCCTCTCGG...TCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CCA 90 bp CATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGCCTAGTCCTCCGGGATaGGAGTGTTGCAGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: HVFQAHMVTLGNCWVPFWPSPPG*ECCSSR
Trigger: ACGGGAACTGCAACACTCCCATCCCGGAGGACTAGG...CCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTTGGAATGAGTCTTCCTaGTCCCGACAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSWNESS*SRQFSC
Trigger: GCAGGAGAACTGTCGGGACCAGGAAGACTCATTCCA...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCTCTTCCAAGCCCACATaGTCACACTTGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSSSKPT*SHLGIA
Trigger: AGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGA...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACTTACTAGCCCATGAGTaGCATGTCTTCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDLLAHE*HVFQAH
Trigger: GTGGGCTTGGAAGACATGTCACTCATGGGCTAGTAA...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCACACTTGGGAATTaGTGGGTTCCTTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKVTLGN*WVPFWF
Trigger: AAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGAC...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGGACTATGAGCAGAAGTaGTGTGTGCAACTCTGGACT +
Preference number: 4 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKDYEQK*CVQLWT
Trigger: AGTCCAGAGTTGCACACAGCACTTCTGCTCATAGTC...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATCCCGCAGCAGGCCCTTaGCCACCTCGCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYPAAGP*PPRGWP
Trigger: AGGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGG...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTGCTTCCCAGCCCACTaGACATGCGTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HVFQAHMVTLGNCWVPFWCFPAH*TCVSFV
Trigger: CACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCA...CCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGCCGGCCTGGGCTTTTTaGAATGAGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HVFQAHMVTLGNCWVPFWPAWAF*NESSWS
Trigger: GGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGG...CCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGGCTATCCTCACTCATaGGAAAAAGAAAAACGTAAA +
Preference number: 4 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRGYPHS*EKEKRK
Trigger: TTTACGTTTTTCTTTTTCCCATGAGTGAGGATAGCC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCATAGACACAGTAGGCTaGGAAAATATTCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSIDTVG*ENIPGN
Trigger: GTTCCCTGGAATATTTTCCCAGCCTACTGTGTCTAT...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR TCA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTATGCTTACTAGCCCATaGGTGACATGTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSMLTSP*VTCLPS
Trigger: GCTTGGAAGACATGTCACTCATGGGCTAGTAAGCAT...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTGCATGGCCTCCACGATaGGGAAGAGCTTATCCGTCA +
Preference number: 4 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGAWPPR*GRAYPS
Trigger: TGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTGCGGGGACTGGCGCATaGCCTCCAGGTTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPAGTGA*PPGSAT
Trigger: TGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGC...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTTCCTGGTCCCCGAGGTaGCCGCGGAAGTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPSWSPR*PRKWYL
Trigger: CAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGA...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCCAGTCCTTGGCGGGTaGCCTCAGCACAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPPVLGG*PQHSDL
Trigger: CAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp CATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGATACAAATGGACCCCTaGGGCTTTCACGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HVFQAHMVTLGNCWVPFWIQMDP*GFHVCS
Trigger: GCTGCAGACGTGAAAGCCCCAGGGGTCCATTTGTAT...CCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp TCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTAGCACAGCAACATCGTaGAAGATGACCTTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SAWPPRWGRAYPSAQQHRSTATS*KMTLRA
Trigger: TGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCT...ACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR TCA 90 bp CTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAGCAATGAGAAGTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LIRQHSNIVEDDLKSNEKCAPPW*TSSAGG
Trigger: ACCACCTGCTGATGATGTTCACCAAGGCGGAGCACA...CTTCTCATTGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR GCA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGCGATTCCCGAGTCACTaGTTAAAAGGAAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKRFPSH*LKGRCL
Trigger: AAGACATCTTCCTTTTAAGCAGTGACTCGGGAATCG...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CCA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCGTCTACGGTCTAACGTaGTATGATAAGGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSVYGLT*YDKGIF
Trigger: AAAAATCCCCTTATCATACCACGTTAGACCGTAGAC...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
3UTR CAA 72 bp TTTGGAAGCTTAGATACTGGGCTGGTCATTAAAACCTaGGCTTACCTTACCCGTTTGGGGCTCGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: FGSLDTGLVIKT*AYLTRLGLDGC
Trigger: GCACCCATCGAGCCCCAAACGGGTAAGGTAAGCCAAGGTTTTAATGACCAGCCCAGTATCTAAGCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR TCA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTTCAAAGAGGCGATCCTaGAACCTACACCAAGTGACG +
Preference number: 4 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGSKRRS*NLHQVT
Trigger: CGTCACTTGGTGTAGGTTTCAGGATCGCCTCTTTGA...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCCAGCCCACTGGACATaGGTGTCCTTTGTGTCGCCT +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPPAHWT*VSFVSP
Trigger: AGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTTTCCTTCTCTTCAAGTaGTTGCTTCCCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGFLLFK*LLPSPL
Trigger: CAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAA...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTTGGGGCTTTCACGTCTaGAGCCTACGTACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCWGFHV*SLRTGG
Trigger: GCCTCCTGTACGTAGGCTGCAGACGTGAAAGCCCCA...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR GCA 90 bp ACTGAAGTGCTTCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAATGAGAAGTGTCACTaGAACTTCAACACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TEVLLHGLHDGEELIRQHNEKCH*NFNTSR
Trigger: TCTGGAAGTGTTGAAGTTGCAGTGACACTTCTCATT...GTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR TCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCCAPPW*TSSAGG
Trigger: ACCACCTGCTGATGATGTTCACCAAGGCGGAGCACA...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp GAAACTGTCAAATTCCTCAAACAACTCCCGGATGTTGGTCTTAAACTTCAGGTCTCTTTGGGCATGATCTaGTGCATGGCGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: ETVKFLKQLPDVGLKLQVSLGMI*CMATER
Trigger: CCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGA...GACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCTAGGTCCAGCTGAATaGTCTGCAGGATCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPLGPAE*SAGSPH
Trigger: GTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR GCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATCTCAGCACAGTGACCTaGCCGGCAGGAGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYLSTVT*PAGGLS
Trigger: GCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAG...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTGTCTGGGGGTTCTCATaGCGGAACTGCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCVWGFS*RNCQNV
Trigger: CACATTCTGGCAGTTCCGCCATGAGAACCCCCAGAC...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATTCCTCAAACAACTCCCGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCATCTGCAGGATCTCTTaGAAAGTGGGACCGACAGAC +
Preference number: 4 (lower is better)
Translates to: NSSNNSRMLVLNFRSRSSICRIS*KVGPTD
Trigger: GTCTGTCGGTCCCACTTTCCAAGAGATCCTGCAGAT...GCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR TCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCRSRSS*MICRIS
Trigger: GGAGATCCTGCAGATCATTCAGCTGGACCTAGACCT...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR GCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTTTCTCTTCAAGTGCTTaGTTCCCAGCCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPFSSSA*FPAHWT
Trigger: TGTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAA...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR GCA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTTTCCTTCTCTTCAAGTaGTTGCTTCCCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCFLLFK*LLPSPL
Trigger: CAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAA...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCTGGTCACCTGGAGCTaGTTTGGTGGAATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPLVTWS*FGGIKD
Trigger: GTCCTTTATTCCACCAAACCAGCTCCAGGTGACCAG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCACATGACTAGCTCCTaGCTGATGGACTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPHMTSS*LMDYEQ
Trigger: CTGCTCATAGTCCATCAGCCAGGAGCTAGTCATGTG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR TCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATTCTTTGGGCATGATCTaGTGCATGGCGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYSLGMI*CMATER
Trigger: CCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGA...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTGAAACCTACACCAAGTaGCGTGAGCATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPETYTK*REHQEN
Trigger: ATTCTCCTGATGCTCACGTCACTTGGTGTAGGTTTC...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTCTGGAGCTGGTTTGGTaGAATAAAGGACAATGGGGT +
Preference number: 4 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPLELVW*NKGQWG
Trigger: ACCCCATTGTCCTTTATTCCACCAAACCAGCTCCAG...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
3UTR CAA 72 bp CCGTTTGGGGCTCGATGGGTGCTAAAGCAGTTCTGTTaGTACTTTCTCGAAAAATGGAAGGCTGTCAATTTA +
Preference number: 4 (lower is better)
Translates to: PFGARWVLKQFC*YFLEKWKAVNL
Trigger: TAAATTGACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATCTTACCTTACCCGTTTaGGGCTCGATGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYLTLPV*GSMGAK
Trigger: TTTAGCACCCATCGAGCCCCAAACGGGTAAGGTAAG...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR TCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATGAAACCTACACCAAGTaGCGTGAGCATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYETYTK*REHQEN
Trigger: ATTCTCCTGATGCTCACGTCACTTGGTGTAGGTTTC...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CCA 90 bp ATCAAAAGAAATGACGCTTTAATTTCTGCTAAGGTCTACGGTCTAACGTGGTATCACCTGGAGCTGGTTTaGTGGAATAAAGGACAATGG +
Preference number: 4 (lower is better)
Translates to: IKRNDALISAKVYGLTWYHLELV*WNKGQW
Trigger: CCATTGTCCTTTATTCCACCAAACCAGCTCCAGGTG...ATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS GCA 90 bp CGCCTCGGAGGAGGCCCATGCGCTACGAGACCGCGGCGCCAGCGGTaGCAGCAACGCGGGAGAGCCCTCGGGTACCCGGACGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: RLGGGPCATRPRRQR*QQRGRALGYPDAGG
Trigger: GCCGCCGGCGTCCGGGTACCCGAGGGCTCTCCCGCGTTGCTGGCACCGCTGGCGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp GCAGGTGGTAGTCCACCGGCCCGGCACCGCCGCCCTCCAAGCTCTTaGCCTTCGCGCCGGGGGCTGGCGCCACGGAGCCCCGCGCTAGCT +
Preference number: 5 (lower is better)
Translates to: AGGSPPARHRRPPSS*PSRRGLAPRSPALA
Trigger: AGCTAGCGCGGGGCTCCGTGGCGCCAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGGACTACCACCTGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS GCA 90 bp GCGCCATGGCCCGAGCGCATGGGAGCCCGCCTCGGAGGAGGCCCATaGGCTACGAGACCGCGGCGCCAGCGGTGCCAGCAACGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: APWPERMGARLGGGP*ATRPRRQRCQQRGR
Trigger: TCTCCCGCGTTGCTGGCACCGCTGGCGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp GTAGTGGGAGCGCACAGCGCCCAGGCGCGCCATGGCCCGAGCGCATaGGAGCCCGCCTCGGAGGAGGCCCATGCGCTACGAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: VVGAHSAQARHGPSA*EPASEEAHALRDRG
Trigger: GCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp GCAGCAGGGCGCAGTAGTGGGAGCGCACAGCGCCCAGGCGCGCCATaGCCCGAGCGCATGGGAGCCCGCCTCGGAGGAGGCCCATGCGCT +
Preference number: 5 (lower is better)
Translates to: AAGRSSGSAQRPGAP*PERMGARLGGGPCA
Trigger: AGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTACTGCGCCCTGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp GCGAGGGCGCGGCGGGAGCCCCGGCGCGGGCCTCCTTCAGCCTCTTaGTGGCGCTGGAGAAGGTCTCCCGGCCTGAGCCGAGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: ARARREPRRGPPSAS*WRWRRSPGLSRGSR
Trigger: TCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp AGGGCGCGGCGGGAGCCCCGGCGCGGGCCTCCTTCAGCCTCTTGGTaGCGCTGGAGAAGGTCTCCCGGCCTGAGCCGAGGTAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RARREPRRGPPSASW*RWRRSPGLSRGSRR
Trigger: CCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp TGCACAGGCCAGTCCTTGGCGGGTGGCCTCAGCACAGTGACCTGCCCGGCAGGATCCCGCAGCAGGCCCTaGGCCACCTCGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CTGQSLAGGLSTVTCPAGSRSRP*ATSRLA
Trigger: GGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGGA...TCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CCA 90 bp CGGCGGGAGCCCCGGCGCGGGCCTCCTTCAGCCTCTTGGTGGCGCTaGAGAAGGTCTCCCGGCCTGAGCCGAGGTAGTAGAAGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: RREPRRGPPSASWWR*RRSPGLSRGSRRRR
Trigger: TCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS TCA 90 bp GGCCTCCTTCAGCCTCTTGGTGGCGCTGGAGAAGGTCTCCCGGCCTaGGCCGAGGTAGTAGAAGGCGCAGACGGCCAGCGCCGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GLLQPLGGAGEGLPA*AEVVEGADGQRRGQ
Trigger: CTGGCCGCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS TCA 90 bp CGACGCGGGCCTTGGCCTGCAGCGCGGCATTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGTAGTCCACCGGCCCGGCACCGCCGC +
Preference number: 5 (lower is better)
Translates to: RRGPWPAARHCAPPW*TSSAGGSPPARHRR
Trigger: GCGGCGGTGCCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS TCA 90 bp GTCAGTGTCAGGCAGCCCCACCGAAGCCGCACACTTGGGCCCTCCTaGCAGGCAGAGCCGGTGACAGGGCTCGGGCGAGGCCTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: VSVRQPHRSRTLGPS*QAEPVTGLGRGLQA
Trigger: GGCTTGAAGGCCTCGCCCGAGCCCTGTCACCGGCTCTGCCTGTCAGGAGGGCCCAAGTGTGCGGCTTCGGTGGGGCTGCCTGACACTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS TCA 90 bp AAGGTTAAGCACCTCGTGCGCCTCGAACTTGGCGAGGCGCAGCAGTaGGCGCAGCGCGACGCGGGCCTTGGCCTGCAGCGCGGCATTGTG +
Preference number: 5 (lower is better)
Translates to: KVKHLVRLELGEAQQ*AQRDAGLGLQRGIV
Trigger: CACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS TCA 90 bp CCCACCGAAGCCGCACACTTGGGCCCTCCTGACAGGCAGAGCCGGTaGCAGGGCTCGGGCGAGGCCTTCAAGCCAGAACGGAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PTEAAHLGPPDRQSR*QGSGEAFKPERRAQ
Trigger: CTGAGCTCTCCGTTCTGGCTTGAAGGCCTCGCCCGAGCCCTGTCACCGGCTCTGCCTGTCAGGAGGGCCCAAGTGTGCGGCTTCGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS GCA 90 bp TTGGCGAGGCGCAGCAGTGAGCGCAGCGCGACGCGGGCCTTGGCCTaGAGCGCGGCATTGTGCTCCGCCTTGGTGAACATCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LARRSSERSATRALA*SAALCSALVNIISR
Trigger: CCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS TCA 90 bp AGCAGGCCCTTGGCCACCTCGCGGCTGGCCTCCTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGCGCCTCGAACTTGGCGAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: SRPLATSRLASSLTK*RLSTSCASNLARRS
Trigger: GCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTGGCCAAGGGCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS CCA 90 bp CCGATCATGGTGAAGAAGTCCTGGTCCCCGAGGTGGCCGCGGAAGTaGTACTTGTCGGCCAGCTGCTGCACCTGCGCCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PIMVKKSWSPRWPRK*YLSASCCTCAGSSR
Trigger: CCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 90 bp GGGTGCTCCATGCCGATCATGGTGAAGAAGTCCTGGTCCCCGAGGTaGCCGCGGAAGTGGTACTTGTCGGCCAGCTGCTGCACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GCSMPIMVKKSWSPR*PRKWYLSASCCTCA
Trigger: GGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS-3UTR CAA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCAGCGCGACGCGGGCCTaGGCCTGCAGCGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSSATRA*ACSAAL
Trigger: CAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCT...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp GCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGACCGCCCTCCAAGCTCTaGGCCTTCGCGCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AWPPRWGRAYPSAQQHRGPPSKL*AFAPGA
Trigger: AGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGG...TCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CAA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGCCTGCAGCGCGGCATaGTGCTCCGCCTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRACSAA*CSALVN
Trigger: GTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGAACATCACCCCGCTGTaGAAGCCCGGCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRNITPL*KPGSPS
Trigger: CGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTT...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS CCA 90 bp CCAGGCAAGGGGAGGCCGGGCCCACACCCTGCAGCCCACTCTCTCTaGAGGCCCAGCTATCGCCCGGAATATTCCAAAGGCTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGKGRPGPHPAAHSL*RPSYRPEYSKGYPE
Trigger: TTCTGGATAGCCTTTGGAATATTCCGGGCGATAGCTGGGCCTCCAGAGAGAGTGGGCTGCAGGGTGTGGGCCCGGCCTCCCCTTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491138.1
CDS-3UTR CAA 90 bp TCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTCCCGCAGCAGGCCCTaGGCCACCTCGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: STMGKSLSVSTATSWKMTSRSRP*ATSRLA
Trigger: GGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGGA...GGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS TCA 90 bp GGAGAGCTCAGCAAGCCCAGGCAGTGGGACGGCAGAGTGTGGGTCTaGACCAGAGAAAAAGGCTGCAGCACAGGAGGGATGACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: GELSKPRQWDGRVWV*TREKGCSTGGMTGE
Trigger: CTCCCCGGTCATCCCTCCTGTGCTGCAGCCTTTTTCTCTGGTTCAGACCCACACTCTGCCGTCCCACTGCCTGGGCTTGCTGAGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491138.1
CDS CCA 90 bp TGGAAGAGCTTGGGGTGCTCCATGCCGATCATGGTGAAGAAGTCCTaGTCCCCGAGGTGGCCGCGGAAGTGGTACTTGTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WKSLGCSMPIMVKKS*SPRWPRKWYLSASC
Trigger: GCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 90 bp CGGCTCTTGCCATCTCAGCCACATCAGGCCCGACTTAGGACCCTCTaGGACCTTTACAACCCCAGAGGTCAGTGTCAGGCAGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: RLLPSQPHQARLRTL*DLYNPRGQCQAAPP
Trigger: CGGTGGGGCTGCCTGACACTGACCTCTGGGGTTGTAAAGGTCCCAGAGGGTCCTAAGTCGGGCCTGATGTGGCTGAGATGGCAAGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS CCA 90 bp TGTGGTGGAGTCACTCCGCTGCTGCGTGCTCCTGTCCACACAGGGTaGGAATCCTCCTCACCCCCTCGGCCCCATCAAGGGCTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: CGGVTPLLRAPVHTG*ESSSPPRPHQGLSD
Trigger: ATCTGAAAGCCCTTGATGGGGCCGAGGGGGTGAGGAGGATTCCCACCCTGTGTGGACAGGAGCACGCAGCAGCGGAGTGACTCCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS-3UTR CAA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCCGCCCTCCAAGCTCTaGGCCTTCGCGCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSPPSKL*AFAPGA
Trigger: AGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGAACATCACCCCGCTGTaGAAGCCCGGCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMNITPL*KPGSPS
Trigger: CGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTT...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp GAAGTGCTTCTGCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCGCCTGCAGCGCGGCATaGTGCTCCGCCTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: EVLLHGLHDGEELIRQHSACSAA*CSALVN
Trigger: GTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGC...GCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CAA 90 bp CGGGTCAGACACTGCCCTTGGGTCTGTCCCAAGGAACCCTGTCCTTCCCCCAGAAGCACATGGAAGAGCTaGGGGTGCTCCATGCCGATC +
Preference number: 5 (lower is better)
Translates to: RVRHCPWVCPKEPCPSPRSTWKS*GCSMPI
Trigger: GATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCT...TCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS GCA 90 bp AGCTGCCGGTTCCAGGTACAGTCCAGCACATGGAAGAGCTTGGGGTaGTCCATGCCGATCATGGTGAAGAAGTCCTGGTCCCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SCRFQVQSSTWKSLG*SMPIMVKKSWSPRW
Trigger: CCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS GCA 90 bp CACTCCTGGAGCCTTTCTTCTGGAATTATCTGGCCGTCCTCCCGCTaGCCTTCTCCCCACAGCTGTTCAGGGTGCAGAACTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: HSWSLSSGIIWPSSR*PSPHSCSGCRTAHW
Trigger: CCAGTGGGCAGTTCTGCACCCTGAACAGCTGTGGGGAGAAGGGCAGCGGGAGGACGGCCAGATAATTCCAGAAGAAAGGCTCCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS CCA 90 bp CAGCAGTTCTGCTGCCACTCCTGGAGCCTTTCTTCTGGAATTATCTaGCCGTCCTCCCGCTGCCCTTCTCCCCACAGCTGTTCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: QQFCCHSWSLSSGII*PSSRCPSPHSCSGC
Trigger: GCACCCTGAACAGCTGTGGGGAGAAGGGCAGCGGGAGGACGGCCAGATAATTCCAGAAGAAAGGCTCCAGGAGTGGCAGCAGAACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS-3UTR CAA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCGCCTCCTTCAGCCTCTaGGTGGCGCTGGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSASFSL*VALEKV
Trigger: GACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGC...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGCATTGTGCTCCGCCTaGGTGAACATCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRALCSA*VNIISR
Trigger: CCTGCTGATGATGTTCACCAAGGCGGAGCACAATGC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp GGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAGCAAGCGCGACGCGGGCCTaGGCCTGCAGCGCGGCATTG +
Preference number: 5 (lower is better)
Translates to: GKSLSVSTATSWKMTLRASATRA*ACSAAL
Trigger: CAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCT...TGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CAA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGCCGCGGAAGTGGTACTaGTCGGCCAGCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKPRKWY*SASCCT
Trigger: GGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGG...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS TCA 90 bp AGTCCAGCACATGGAAGAGCTTGGGGTGCTCCATGCCGATCATGGTaGAGAAGTCCTGGTCCCCGAGGTGGCCGCGGAAGTGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: SPAHGRAWGAPCRSW*RSPGPRGGRGSGTC
Trigger: ACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS GCA 90 bp CAGAAGTGCTGTGTGCAACTCTGGACTGTAGCAGTGAGAAGCCACTaGAGGGCCTCAGCCACTGCTCCCCTGGAAGCCACATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QKCCVQLWTVAVRSH*RASATAPLEATCSR
Trigger: TCTGGAGCATGTGGCTTCCAGGGGAGCAGTGGCTGAGGCCCTGCAGTGGCTTCTCACTGCTACAGTCCAGAGTTGCACACAGCACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437101.5
ENST00000476897.5
CDS GCA 90 bp TACCTTGTACAAGAGGTGTACACTGTGGTGGAGTCACTCCGCTGCTaGGTGCTCCTGTCCACACAGGGTGGGAATCCTCCTCACCCCCTC +
Preference number: 5 (lower is better)
Translates to: YLVQEVYTVVESLRC*VLLSTQGGNPPHPL
Trigger: GAGGGGGTGAGGAGGATTCCCACCCTGTGTGGACAGGAGCACGCAGCAGCGGAGTGACTCCACCACAGTGTACACCTCTTGTACAAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS CCA 90 bp CTCCACCAGGTGCACAGCTGCCGGTTCCAGGTACAGTCCAGCACATaGAAGAGCTTGGGGTGCTCCATGCCGATCATGGTGAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LHQVHSCRFQVQSST*KSLGCSMPIMVKKS
Trigger: GGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 90 bp CAGTGGCAGCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCTGTGTaGAATTTCGTGGGCTGGCTTGCTGGGGAGGCCATGAAACATGAA +
Preference number: 5 (lower is better)
Translates to: QWQLLLLLLLFLLPV*NFVGWLAGEAMKHE
Trigger: TTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACAGGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGCTGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS-3UTR CAA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACTCGTGCGCCTCGAACTaGGCGAGGCGCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDSCASN*ARRSSE
Trigger: CTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGA...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGTCGTGGAAGATGACCTaGCACTTGAAGCCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKSWKMT*HLKPAA
Trigger: CGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCACGA...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp GTGTTTCCCAGGCTGATCTCGACCTCCGAGGCTCAATCGATACCCCCACCTCGGCTTCTCTTCAAGTGCTaGCTTCCCAGCCCACTGGAC +
Preference number: 5 (lower is better)
Translates to: VFPRLISTSEAQSIPPPRLLFKC*LPSPLD
Trigger: GTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAG...CCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp GCATGGCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAGTCAAAAACTTGCACTaGAAGCCAGCGGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: AWPPRWGRAYPSAQQHRGVKNLH*KPAAGG
Trigger: GCCGCCCGCCGCTGGCTTCAAGTGCAAGTTTTTGAC...TCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS GCA 90 bp AATAGGCCTCGAAGACGTCACTGTAGCCATGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGGTACAGTCCAGCACATGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: NRPRRRHCSHGPSTR*TAAGSRYSPAHGRA
Trigger: AGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 90 bp GCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTaGAAGATGACAGTTCTGCCTGGCTGGGGAGGCCTCAGGAAACAC +
Preference number: 5 (lower is better)
Translates to: ASTMGKSLSVSTATS*KMTVLPGWGGLRKH
Trigger: GTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS CCA 90 bp CGCTGCCCTTCTCCCCACAGCTGTTCAGGGTGCAGAACTGCCCACTaGGGAAAAGGTGCCCTGACTCCAAGCGCATCCAAACTAATTAGG +
Preference number: 5 (lower is better)
Translates to: RCPSPHSCSGCRTAH*GKGALTPSASKLIR
Trigger: CCTAATTAGTTTGGATGCGCTTGGAGTCAGGGCACCTTTTCCCCAGTGGGCAGTTCTGCACCCTGAACAGCTGTGGGGAGAAGGGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS-3UTR CAA 90 bp GGGCCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTGCAACAACTCCCGGATGTaGGTCTTAAACTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GPPTRVWGFSWRNCQNVCNNSRM*VLNFRS
Trigger: AGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTT...GCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CAA 90 bp TTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCAAGGGACATGCGTGTCCTTaGTGTCGCCTGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: FLRGRQQGGPFLPFLLFKGHACP*CRLLPG
Trigger: TCCAGGGAGCAGGCGACACAAAGGACACGCATGTCC...CTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS GCA 90 bp GGCCCCATCAAGGGCTTTCAGATTTTACAGAAACGTTCCGGCTCTTaGCATCTCAGCCACATCAGGCCCGACTTAGGACCCTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: GPIKGFQILQKRSGS*HLSHIRPDLGPSGT
Trigger: GGTCCCAGAGGGTCCTAAGTCGGGCCTGATGTGGCTGAGATGGCAAGAGCCGGAACGTTTCTGTAAAATCTGAAAGCCCTTGATGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS CCA 90 bp TCCGTCAGCACAGCAACATCGTGGAAGATGACAGTTCTGCCTGGCTaGGGAGGCCTCAGGAAACACACAATCACGGCGGAAGGGACACAT +
Preference number: 5 (lower is better)
Translates to: SVSTATSWKMTVLPG*GGLRKHTITAEGTH
Trigger: ATGTGTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS CCA 90 bp CTTATCCGTCAGCACAGCAACATCGTGGAAGATGACAGTTCTGCCTaGCTGGGGAGGCCTCAGGAAACACACAATCACGGCGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LIRQHSNIVEDDSSA*LGRPQETHNHGGRD
Trigger: GTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS CCA 90 bp AGCTCCTGGCTGATGGACTATGAGCAGAAGTGCTGTGTGCAACTCTaGACTGTAGCAGTGAGAAGCCACTGCAGGGCCTCAGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: SSWLMDYEQKCCVQL*TVAVRSHCRASATA
Trigger: AGCAGTGGCTGAGGCCCTGCAGTGGCTTCTCACTGCTACAGTCCAGAGTTGCACACAGCACTTCTGCTCATAGTCCATCAGCCAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437101.5
ENST00000476897.5
CDS CCA 90 bp CTCCTCCTCCTCCTCTTCCTCCTCCCTGTGTGGAATTTCGTGGGCTaGCTTGCTGGGGAGGCCATGAAACATGAAATTCACAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LLLLLFLLPVWNFVG*LAGEAMKHEIHSTG
Trigger: GCCAGTGCTGTGAATTTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACAGGGAGGAGGAAGAGGAGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS CCA 90 bp CCGAAAATAACAGCAGTTCTGCTGCCACTCCTGGAGCCTTTCTTCTaGAATTATCTGGCCGTCCTCCCGCTGCCCTTCTCCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PKITAVLLPLLEPFF*NYLAVLPLPFSPQL
Trigger: CAGCTGTGGGGAGAAGGGCAGCGGGAGGACGGCCAGATAATTCCAGAAGAAAGGCTCCAGGAGTGGCAGCAGAACTGCTGTTATTTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS-3UTR CAA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTGGACATGCGTGTCCTTaGTGTCGCCTGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSGHACP*CRLLPG
Trigger: TCCAGGGAGCAGGCGACACAAAGGACACGCATGTCC...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp AAAAGGCCGGGTCTAAAGGATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACTGCCTTCCTGGATCCTaGCAGCGAGGTGGCCACATG +
Preference number: 5 (lower is better)
Translates to: KRPGLKDFHSSEADSKGDCLPGS*QRGGHM
Trigger: CATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCA...GTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS TCA 90 bp TCTGTCCTCTGTGCTGTCAGGCCTTGCGGAGGCCAACACTCACTATaGCTCGGTGGTGCCCGAGCTGCAGAAGACCCAAACTTGACTTTT +
Preference number: 5 (lower is better)
Translates to: SVLCAVRPCGGQHSL*LGGARAAEDPNLTF
Trigger: AAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGCCTGACAGCACAGAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS CCA 90 bp CTGTGCTGTCAGGCCTTGCGGAGGCCAACACTCACTATGACTCGGTaGTGCCCGAGCTGCAGAAGACCCAAACTTGACTTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LCCQALRRPTLTMTR*CPSCRRPKLDFSSF
Trigger: GAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGCCTGACAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS-3UTR CAA 90 bp GCATGGCGACCGAGAGGAAGAAGATGGAGTCACTGTAGTAGGTTCCCAAGCCAGGCATTGTGCTCCGCCTaGGTGAACATCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AWRPRGRRWSHCSRFPSQALCSA*VNIISR
Trigger: CCTGCTGATGATGTTCACCAAGGCGGAGCACAATGC...CTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CAA 90 bp ATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGATCGTGCGCCTCGAACTaGGCGAGGCGCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: MGKSLSVSTATSWKMTLRSCASN*ARRSSE
Trigger: CTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGA...TCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS-3UTR CAA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCCCCACATGGTCACACTaGGGAATTGCTGGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSPTWSH*GIAGFL
Trigger: AAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGG...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp GCCTCCACGATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGCAAGGCCCTCTCCAGTaGCTCAGGATGACTACTGGT +
Preference number: 5 (lower is better)
Translates to: ASTMGKSLSVSTATSWKMQGPLQ*LRMTTG
Trigger: ACCAGTAGTCATCCTGAGCAACTGGAGAGGGCCTTG...CATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS TCA 90 bp TCCTCCCTGTGTGGAATTTCGTGGGCTGGCTTGCTGGGGAGGCCATaGAACATGAAATTCACAGCACTGGCCTCTCCTGTTCCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSLCGISWAGLLGRP*NMKFTALASPVPRS
Trigger: AGACCTAGGAACAGGAGAGGCCAGTGCTGTGAATTTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACAGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS GCA 90 bp TGCTGTCAGGCCTTGCGGAGGCCAACACTCACTATGACTCGGTGGTaGCCGAGCTGCAGAAGACCCAAACTTGACTTTTCAAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CCQALRRPTLTMTRW*PSCRRPKLDFSSFS
Trigger: AGAGAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGCCTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS-3UTR CAA 90 bp ATGTCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTAAGATGACCTTGCACTaGAAGCCAGCGGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: MSSKPTWSHLGIAGFLFGKMTLH*KPAAGG
Trigger: GCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTT...ACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp AATTCCTCAAACAACTCCCGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCAACATCACCCCGCTGTaGAAGCCCGGCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: NSSNNSRMLVLNFRSRSSNITPL*KPGSPS
Trigger: CGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTT...GCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CAA 90 bp TCTTCCAAGCCCACATGGTCACACTTGGGAATTGCTGGGTTCCTTTTTGGTTTTCCGCGGAAGTGGTACTaGTCGGCCAGCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: SSKPTWSHLGIAGFLFGFPRKWY*SASCCT
Trigger: GGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGG...AAAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTTCTCTTCAAGTGCTaGCTTCCCAGCCCACTGGAC +
Preference number: 5 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSLLFKC*LPSPLD
Trigger: GTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp CCCTGGAGGAATAAGGTCCCAAGCACCAGCAGTGCACAGGCCAGTCCTTGGCGGGCCAGTCTCTGTTCTTaGATGACGAATTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PWRNKVPSTSSAQASPWRASLCS*MTNLLS
Trigger: AGAAAGCAAATTCGTCATCAAAGAACAGAGACTGGC...CCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp CTGCCAGAATGTGTGCCTGTAAACTGGCTGCATCTCCCGGGCTATGCCGATGATGATCTGCAGGATCTCTaGGAAAGTGGGACCGACAGA +
Preference number: 5 (lower is better)
Translates to: LPECVPVNWLHLPGYADDDLQDL*ESGTDR
Trigger: TCTGTCGGTCCCACTTTCCAAGAGATCCTGCAGATC...ATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACATTCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS TCA 90 bp ACTCACTATGACTCGGTGGTGCCCGAGCTGCAGAAGACCCAAACTTaGCTTTTCAAGCTTCTCTTTCAAGGACTGCCTGGGGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: THYDSVVPELQKTQT*LFKLLFQGLPGALQ
Trigger: CTGGAGAGCCCCAGGCAGTCCTTGAAAGAGAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS TCA 90 bp TGTGTGGAATTTCGTGGGCTGGCTTGCTGGGGAGGCCATGAAACATaGAATTCACAGCACTGGCCTCTCCTGTTCCTAGGTCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: CVEFRGLACWGGHET*NSQHWPLLFLGLRL
Trigger: CAGTCTGAGACCTAGGAACAGGAGAGGCCAGTGCTGTGAATTTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS GCA 90 bp GCCTTGCGGAGGCCAACACTCACTATGACTCGGTGGTGCCCGAGCTaGAGAAGACCCAAACTTGACTTTTCAAGCTTCTCTTTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: ALRRPTLTMTRWCPS*RRPKLDFSSFSFKD
Trigger: GTCCTTGAAAGAGAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS-3UTR CAA 90 bp AGTGACGTGAGCATCAGGAGAATGCGCGTGCAGCAGCCTCCCAGGGTGAGTATGAACAACTCCCGGATGTaGGTCTTAAACTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SDVSIRRMRVQQPPRVSMNNSRM*VLNFRS
Trigger: AGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTT...CATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp CCAGCCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGAACAACTCCCGGATGTaGGTCTTAAACTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PAHWTCVSFVSPAPWRNKNNSRM*VLNFRS
Trigger: AGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTT...CTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS TCA 90 bp TCACAGATGGCTGCCTTTCCCCAGTCTCCTCATATGGTGAAGGGGTaGCAGAGCTCTTCAGGGTCTCTTTCATCAGGACACTCATCCCAT +
Preference number: 5 (lower is better)
Translates to: SQMAAFPQSPHMVKG*QSSSGSLSSGHSSH
Trigger: ATGGGATGAGTGTCCTGATGAAAGAGACCCTGAAGAGCTCTGTCACCCCTTCACCATATGAGGAGACTGGGGAAAGGCAGCCATCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356740.5
CDS TCA 90 bp TCCTGGCTCTGTAGCCCCAGTCTCGGGTATTTCTTCGTAGCGGTGTaGGAACAGACGAATACAGTGTGTCTCCCACTGAACTCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SWLCSPSLGYFFVAV*EQTNTVCLPLNSWD
Trigger: ATCCCAAGAGTTCAGTGGGAGACACACTGTATTCGTCTGTTCTCACACCGCTACGAAGAAATACCCGAGACTGGGGCTACAGAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS GCA 90 bp TCGATTCCCGAGTCACTGCTTAAAAGGAAGATGTCTTCCTTCGGCTaGAGCCTCGCCGATTCCCGAGCTGTTTCCTGCTGCTTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SIPESLLKRKMSSFG*SLADSRAVSCCFSH
Trigger: ATGAGAAAAGCAGCAGGAAACAGCTCGGGAATCGGCGAGGCTGCAGCCGAAGGAAGACATCTTCCTTTTAAGCAGTGACTCGGGAATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS-3UTR CAA 90 bp CCCACTGGACATGCGTGTCCTTTGTGTCGCCTGCTCCCTGGAGGAATAAGGTCCCTCAAAGATGATTTATaGGCTATCCTCACTCATGGG +
Preference number: 5 (lower is better)
Translates to: PTGHACPLCRLLPGGIRSLKDDL*AILTHG
Trigger: CCCATGAGTGAGGATAGCCAATAAATCATCTTTGAG...GGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS TCA 90 bp AACAACTCCCGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCCGCACTCTGCCTTCCTGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: NNSRMLVLNFRSRSS*MICRISALCLPGSL
Trigger: CAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS CCA 90 bp GGGATTCAGGCTACGATTGGTCTGTCCTTTGGGTCTCTGAAAAATTaGCTTCCATCTGTTGTGGCCAGTGCCAGAAGGTCTGGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GIQATIGLSFGSLKN*LPSVVASARRSGSW
Trigger: CCAAGAACCAGACCTTCTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CCA 90 bp CTCCCACTGAACTCTTGGGATTCAGGCTACGATTGGTCTGTCCTTTaGGTCTCTGAAAAATTGGCTTCCATCTGTTGTGGCCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPLNSWDSGYDWSVL*VSEKLASICCGQCQ
Trigger: CTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCCCAAGAGTTCAGTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS TCA 90 bp GAACTCTTGGGATTCAGGCTACGATTGGTCTGTCCTTTGGGTCTCTaGAAAATTGGCTTCCATCTGTTGTGGCCAGTGCCAGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: ELLGFRLRLVCPLGL*KIGFHLLWPVPEGL
Trigger: CAGACCTTCTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCCCAAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CCA 90 bp AAGTGGCCTCGATTCCCGAGTCACTGCTTAAAAGGAAGATGTCCTTaGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: KWPRFPSHCLKGRCP*KVGPTDRPSVMCKM
Trigger: CATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCAAGGACATCTTCCTTTTAAGCAGTGACTCGGGAATCGAGGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS-3UTR CAA 90 bp GGGAAGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATGACCTTAAGAGCATCAGAAGTCAAAAACTaGCACTTGAAGCCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GKSLSVSTATSWKMTLRASEVKN*HLKPAA
Trigger: CGCCGCTGGCTTCAAGTGCAAGTTTTTGACTTCTGA...TGCTCTTAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455281.1
CDS GCA 90 bp AGATGTCCTTGGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTaGAAGATGTTCTACCTTGTACAAGAGGTGTACACTGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RCPWKVGPTDRPSVM*KMFYLVQEVYTVVE
Trigger: CTCCACCACAGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCAAGGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS-3UTR CAA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTAGCACATGGAAGAGCTaGGGGTGCTCCATGCCGATC +
Preference number: 5 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPSTWKS*GCSMPI
Trigger: GATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCT...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp GGCAGGAGGTCTCAGCACCTTAATCACAGGACTTCCCTGCGGTGTCTCTCTAGCCTAAAGCAGTTCTGTTaGTACTTTCTCGAAAAATGG +
Preference number: 5 (lower is better)
Translates to: GRRSQHLNHRTSLRCLSSLKQFC*YFLEKW
Trigger: CCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAG...GCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS GCA 90 bp AGGATCTCTTGGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTaGAAGATGTTCTACCTTGTACAAGAGGTGTACACTCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RISWKVGPTDRPSVM*KMFYLVQEVYTLWA
Trigger: TGCCCAAAGAGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCAAGAGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS GCA 90 bp TCTGGTTCTTGGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTaGAAGATGTTCTACCTTGTACAAGAGGTGTACACTCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SGSWKVGPTDRPSVM*KMFYLVQEVYTLWA
Trigger: TGCCCAAAGAGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCAAGAACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS-3UTR CAA 90 bp ATTTCCATTCCTCAGAGGCAGACAGCAAGGGGGACCCTTTCTCCCCTTCCTTCTCTAAAGCAGTTCTGTTaGTACTTTCTCGAAAAATGG +
Preference number: 5 (lower is better)
Translates to: ISIPQRQTARGTLSPLPSLKQFC*YFLEKW
Trigger: CCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAG...AGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS-3UTR CAA 90 bp AATTCCTCAAACAACTCCCGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCGCAAGATGTTCTACCTaGTACAAGAGGTGTACACTC +
Preference number: 5 (lower is better)
Translates to: NSSNNSRMLVLNFRSRSSARCST*YKRCTL
Trigger: GAGTGTACACCTCTTGTACAAGGTAGAACATCTTGC...GCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418940.5
CDS-3UTR CAA 90 bp AATAATGAGATAAGTTTTCTTATGCAGGCCCCAGTTGGTCCTGAAGTCCTTCCTGGTCACACTTGGGAATaGCTGGGTTCCTTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NNEISFLMQAPVGPEVLPGHTWE*LGSFLV
Trigger: AACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACC...AGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS-3UTR CAA 90 bp TCGATGGGTGCTAAAGCAGTTCTGTTTGTACTTTCTCGAAAAATGGAAGGCTGTGCCAGTCTCTGTTCTTaGATGACGAATTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: SMGAKAVLFVLSRKMEGCASLCS*MTNLLS
Trigger: AGAAAGCAAATTCGTCATCAAAGAACAGAGACTGGC...ACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000437101.5
CDS CCA 72 bp CGCAGTAGTGGGAGCGCACAGCGCCCAGGCGCGCCATaGCCCGAGCGCATGGGAGCCCGCCTCGGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RSSGSAQRPGAP*PERMGARLGGG
Trigger: GCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTACTGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CAA 72 bp CCAGCGGCGGGCGGCAGGAGCTCCCGCAGCAGGCCCTaGGCCACCTCGCGGCTGGCCTCCTCGCTCACGAAG +
Preference number: 6 (lower is better)
Translates to: PAAGGRSSRSRP*ATSRLASSLTK
Trigger: CTTCGTGAGCGAGGAGGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS GCA 72 bp GGAGGCCCATGCGCTACGAGACCGCGGCGCCAGCGGTaGCAGCAACGCGGGAGAGCCCTCGGGTACCCGGAC +
Preference number: 6 (lower is better)
Translates to: GGPCATRPRRQR*QQRGRALGYPD
Trigger: GTCCGGGTACCCGAGGGCTCTCCCGCGTTGCTGGCACCGCTGGCGCCGCGGTCTCGTAGCGCATGGGCCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS GCA 72 bp CCCGAGCGCATGGGAGCCCGCCTCGGAGGAGGCCCATaGGCTACGAGACCGCGGCGCCAGCGGTGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: PERMGARLGGGP*ATRPRRQRCQQ
Trigger: TTGCTGGCACCGCTGGCGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS TCA 72 bp CACCTCGTGCGCCTCGAACTTGGCGAGGCGCAGCAGTaGGCGCAGCGCGACGCGGGCCTTGGCCTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: HLVRLELGEAQQ*AQRDAGLGLQR
Trigger: GCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS CAA 72 bp GCGAGGCGCAGCAGTGAGCGCAGCGCGACGCGGGCCTaGGCCTGCAGCGCGGCATTGTGCTCCGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: ARRSSERSATRA*ACSAALCSALV
Trigger: CACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS TCA 72 bp AGGCAGCCCCACCGAAGCCGCACACTTGGGCCCTCCTaGCAGGCAGAGCCGGTGACAGGGCTCGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: RQPHRSRTLGPS*QAEPVTGLGRG
Trigger: GCCTCGCCCGAGCCCTGTCACCGGCTCTGCCTGTCAGGAGGGCCCAAGTGTGCGGCTTCGGTGGGGCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS GCA 72 bp CGCAGCAGTGAGCGCAGCGCGACGCGGGCCTTGGCCTaGAGCGCGGCATTGTGCTCCGCCTTGGTGAACATC +
Preference number: 6 (lower is better)
Translates to: RSSERSATRALA*SAALCSALVNI
Trigger: GATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS CAA 90 bp ATGGTGAAGAAGTCCTGGTCCCCGAGGTGGCCGCGGAAGTGGTACTaGTCGGCCAGCTGCTGCACCTGCGCCGGCTCCAGCAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: MVKKSWSPRWPRKWY*SASCCTCAGSSRRL
Trigger: CAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS TCA 72 bp CAGCCTCTTGGTGGCGCTGGAGAAGGTCTCCCGGCCTaGGCCGAGGTAGTAGAAGGCGCAGACGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: QPLGGAGEGLPA*AEVVEGADGQR
Trigger: GCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310380.11
CDS CAA 72 bp CGCAGCGCGACGCGGGCCTTGGCCTGCAGCGCGGCATaGTGCTCCGCCTTGGTGAACATCATCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: RSATRALACSAA*CSALVNIISRW
Trigger: CCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS CAA 90 bp TCGAACTTGGCGAGGCGCAGCAGTGAGCGCAGCGCGACGCGGGCCTaGGCCTGCAGCGCGGCATTGTGCTCCGCCTTGGTGAACATCATC +
Preference number: 6 (lower is better)
Translates to: SNLARRSSERSATRA*ACSAALCSALVNII
Trigger: GATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS CCA 72 bp GTCACTCCGCTGCTGCGTGCTCCTGTCCACACAGGGTaGGAATCCTCCTCACCCCCTCGGCCCCATCAAGGG +
Preference number: 6 (lower is better)
Translates to: VTPLLRAPVHTG*ESSSPPRPHQG
Trigger: CCCTTGATGGGGCCGAGGGGGTGAGGAGGATTCCCACCCTGTGTGGACAGGAGCACGCAGCAGCGGAGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS TCA 72 bp CCTTGGCCTGCAGCGCGGCATTGTGCTCCGCCTTGGTaGACATCATCAGCAGGTGGTAGTCCACCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: PWPAARHCAPPW*TSSAGGSPPAR
Trigger: CCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS TCA 72 bp TTGGCCACCTCGCGGCTGGCCTCCTCGCTCACGAAGTaGAGGTTAAGCACCTCGTGCGCCTCGAACTTGGCG +
Preference number: 6 (lower is better)
Translates to: LATSRLASSLTK*RLSTSCASNLA
Trigger: CGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTGGCCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310380.11
ENST00000455281.1
CDS GCA 72 bp CCCCCAACCCGGGTCTGGGGGTTCTCATGGCGGAACTaGCAGAATGTGTGCCTCTGTCCTCTGTGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PPTRVWGFSWRN*QNVCLCPLCCQ
Trigger: CTGACAGCACAGAGGACAGAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS CCA 72 bp ATGCCGATCATGGTGAAGAAGTCCTGGTCCCCGAGGTaGCCGCGGAAGTGGTACTTGTCGGCCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MPIMVKKSWSPR*PRKWYLSASCC
Trigger: GCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 72 bp CTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCTGTGTaGAATTTCGTGGGCTGGCTTGCTGGGGAGGCCATG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLFLLPV*NFVGWLAGEAM
Trigger: CATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACAGGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS TCA 72 bp CATGGAAGAGCTTGGGGTGCTCCATGCCGATCATGGTaGAGAAGTCCTGGTCCCCGAGGTGGCCGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: HGRAWGAPCRSW*RSPGPRGGRGS
Trigger: ACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CCA 72 bp TTGGGGTGCTCCATGCCGATCATGGTGAAGAAGTCCTaGTCCCCGAGGTGGCCGCGGAAGTGGTACTTGTCG +
Preference number: 6 (lower is better)
Translates to: LGCSMPIMVKKS*SPRWPRKWYLS
Trigger: CGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CAA 90 bp GTGCACAGCTGCCGGTTCCAGGTACAGTCCAGCACATGGAAGAGCTaGGGGTGCTCCATGCCGATCATGGTGAAGAAGTCCTGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: VHSCRFQVQSSTWKS*GCSMPIMVKKSWSP
Trigger: CGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS TCA 72 bp TGTGCTGTCAGGCCTTGCGGAGGCCAACACTCACTATaGCTCGGTGGTGCCCGAGCTGCAGAAGACCCAAAC +
Preference number: 6 (lower is better)
Translates to: CAVRPCGGQHSL*LGGARAAEDPN
Trigger: GTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGCCTGACAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS GCA 72 bp CGAAGACGTCACTGTAGCCATGGTCCCTCCACCAGGTaGACAGCTGCCGGTTCCAGGTACAGTCCAGCACAT +
Preference number: 6 (lower is better)
Translates to: RRRHCSHGPSTR*TAAGSRYSPAH
Trigger: ATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS GCA 72 bp CAAGAGGTGTACACTGTGGTGGAGTCACTCCGCTGCTaGGTGCTCCTGTCCACACAGGGTGGGAATCCTCCT +
Preference number: 6 (lower is better)
Translates to: QEVYTVVESLRC*VLLSTQGGNPP
Trigger: AGGAGGATTCCCACCCTGTGTGGACAGGAGCACGCAGCAGCGGAGTGACTCCACCACAGTGTACACCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS CCA 72 bp GTGCACAGCTGCCGGTTCCAGGTACAGTCCAGCACATaGAAGAGCTTGGGGTGCTCCATGCCGATCATGGTG +
Preference number: 6 (lower is better)
Translates to: VHSCRFQVQSST*KSLGCSMPIMV
Trigger: CACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS CAA 72 bp ATCTGCAGGATCTCCGCACTCTGCCTTCCTGGATCCTaGCAGCGAGGTGGCCACATGACTAGCTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ICRISALCLPGS*QRGGHMTSSWL
Trigger: CAGCCAGGAGCTAGTCATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS GCA 72 bp GTACAAGAGGTGTACACTGTGGTGGAGTCACTCCGCTaGTGCGTGCTCCTGTCCACACAGGGTGGGAATCCT +
Preference number: 6 (lower is better)
Translates to: VQEVYTVVESLR*CVLLSTQGGNP
Trigger: AGGATTCCCACCCTGTGTGGACAGGAGCACGCAGCAGCGGAGTGACTCCACCACAGTGTACACCTCTTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS CCA 72 bp CCATCTCAGCCACATCAGGCCCGACTTAGGACCCTCTaGGACCTTTACAACCCCAGAGGTCAGTGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: PSQPHQARLRTL*DLYNPRGQCQA
Trigger: TGCCTGACACTGACCTCTGGGGTTGTAAAGGTCCCAGAGGGTCCTAAGTCGGGCCTGATGTGGCTGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS CCA 72 bp TCTCCCCACAGCTGTTCAGGGTGCAGAACTGCCCACTaGGGAAAAGGTGCCCTGACTCCAAGCGCATCCAAA +
Preference number: 6 (lower is better)
Translates to: SPHSCSGCRTAH*GKGALTPSASK
Trigger: TTTGGATGCGCTTGGAGTCAGGGCACCTTTTCCCCAGTGGGCAGTTCTGCACCCTGAACAGCTGTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS CAA 90 bp CGGCCCCATCAAGGGCTTTCAGATTTTACAGAAACGTTCCGGCTCTaGCCATCTCAGCCACATCAGGCCCGACTTAGGACCCTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: RPHQGLSDFTETFRL*PSQPHQARLRTLWD
Trigger: GTCCCAGAGGGTCCTAAGTCGGGCCTGATGTGGCTGAGATGGCAAGAGCCGGAACGTTTCTGTAAAATCTGAAAGCCCTTGATGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS GCA 72 bp ACGTGCCCACTGATTCTGTGTCTGGTGAGGACTCACTaGCCAGTTCACAGATGGCTGCCTTTCCCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: TCPLILCLVRTH*PVHRWLPFPSL
Trigger: GAGACTGGGGAAAGGCAGCCATCTGTGAACTGGGCAGTGAGTCCTCACCAGACACAGAATCAGTGGGCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356740.5
CDS GCA 72 bp AGCCTTTCTTCTGGAATTATCTGGCCGTCCTCCCGCTaGCCTTCTCCCCACAGCTGTTCAGGGTGCAGAACT +
Preference number: 6 (lower is better)
Translates to: SLSSGIIWPSSR*PSPHSCSGCRT
Trigger: AGTTCTGCACCCTGAACAGCTGTGGGGAGAAGGGCAGCGGGAGGACGGCCAGATAATTCCAGAAGAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS CCA 72 bp ATGGGGAAGAGCTTATCCGTCAGCACAGCAACATCGTaGAAGATGACAGTTCTGCCTGGCTGGGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: MGKSLSVSTATS*KMTVLPGWGGL
Trigger: GAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS CAA 72 bp TGCCGGTTCCAGGTACAGTCCAGCACATGGAAGAGCTaGGGGTGCTCCATGCCGATCATGGTGAAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: CRFQVQSSTWKS*GCSMPIMVKKS
Trigger: GGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS TCA 72 bp AGAGCTTATCCGTCAGCACAGCAACATCGTGGAAGATaGCAGTTCTGCCTGGCTGGGGAGGCCTCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RAYPSAQQHRGR*QFCLAGEASGN
Trigger: GTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS GCA 72 bp TTCCAGGTACAGTCCAGCACATGGAAGAGCTTGGGGTaGTCCATGCCGATCATGGTGAAGAAGTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: FQVQSSTWKSLG*SMPIMVKKSWS
Trigger: GGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310380.11
ENST00000356740.5
ENST00000429994.5
ENST00000437101.5
ENST00000460582.1
ENST00000473200.1
CDS GCA 72 bp GTCTGGGGGTTCTCATGGCGGAACTGCCAGAATGTGTaGAGTTCTAGAGGCTGGGAAGTCCAAGACCAACGT +
Preference number: 6 (lower is better)
Translates to: VWGFSWRNCQNV*SSRGWEVQDQR
Trigger: ACGTTGGTCTTGGACTTCCCAGCCTCTAGAACTGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356740.5
CDS GCA 72 bp GAGTCACTGCTTAAAAGGAAGATGTCTTCCTTCGGCTaGAGCCTCGCCGATTCCCGAGCTGTTTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ESLLKRKMSSFG*SLADSRAVSCC
Trigger: GCAGCAGGAAACAGCTCGGGAATCGGCGAGGCTGCAGCCGAAGGAAGACATCTTCCTTTTAAGCAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS GCA 72 bp GCCTTGCGGAGGCCAACACTCACTATGACTCGGTGGTaGCCGAGCTGCAGAAGACCCAAACTTGACTTTTCA +
Preference number: 6 (lower is better)
Translates to: ALRRPTLTMTRW*PSCRRPKLDFS
Trigger: TGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCTCCGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS CCA 72 bp ACAGCAACATCGTGGAAGATGACAGTTCTGCCTGGCTaGGGAGGCCTCAGGAAACACACAATCACGGCGGAA +
Preference number: 6 (lower is better)
Translates to: TATSWKMTVLPG*GGLRKHTITAE
Trigger: TTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000429994.5
CDS TCA 72 bp GCTGCCTTTCCCCAGTCTCCTCATATGGTGAAGGGGTaGCAGAGCTCTTCAGGGTCTCTTTCATCAGGACAC +
Preference number: 6 (lower is better)
Translates to: AAFPQSPHMVKG*QSSSGSLSSGH
Trigger: GTGTCCTGATGAAAGAGACCCTGAAGAGCTCTGTCACCCCTTCACCATATGAGGAGACTGGGGAAAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356740.5
CDS TCA 72 bp GACTCGGTGGTGCCCGAGCTGCAGAAGACCCAAACTTaGCTTTTCAAGCTTCTCTTTCAAGGACTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: DSVVPELQKTQT*LFKLLFQGLPG
Trigger: CCCAGGCAGTCCTTGAAAGAGAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS TCA 72 bp TTTCGTGGGCTGGCTTGCTGGGGAGGCCATGAAACATaGAATTCACAGCACTGGCCTCTCCTGTTCCTAGGT +
Preference number: 6 (lower is better)
Translates to: FRGLACWGGHET*NSQHWPLLFLG
Trigger: ACCTAGGAACAGGAGAGGCCAGTGCTGTGAATTTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS CCA 72 bp CTGATGGACTATGAGCAGAAGTGCTGTGTGCAACTCTaGACTGTAGCAGTGAGAAGCCACTGCAGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LMDYEQKCCVQL*TVAVRSHCRAS
Trigger: TGAGGCCCTGCAGTGGCTTCTCACTGCTACAGTCCAGAGTTGCACACAGCACTTCTGCTCATAGTCCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437101.5
ENST00000476897.5
CDS CCA 72 bp CTCCTCTTCCTCCTCCCTGTGTGGAATTTCGTGGGCTaGCTTGCTGGGGAGGCCATGAAACATGAAATTCAC +
Preference number: 6 (lower is better)
Translates to: LLFLLPVWNFVG*LAGEAMKHEIH
Trigger: GTGAATTTCATGTTTCATGGCCTCCCCAGCAAGCCAGCCCACGAAATTCCACACAGGGAGGAGGAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496644.1
CDS TCA 72 bp CACAGATGGCTGCCTTTCCCCAGTCTCCTCATATGGTaGAGGGGTGACAGAGCTCTTCAGGGTCTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: HRWLPFPSLLIW*RGDRALQGLFH
Trigger: ATGAAAGAGACCCTGAAGAGCTCTGTCACCCCTTCACCATATGAGGAGACTGGGGAAAGGCAGCCATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356740.5
CDS GCA 72 bp GTTACAGGATGGAAGTGGCCTCGATTCCCGAGTCACTaGTTAAAAGGAAGATGTCTTCCTTCGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: VTGWKWPRFPSH*LKGRCLPSAAA
Trigger: GGCTGCAGCCGAAGGAAGACATCTTCCTTTTAAGCAGTGACTCGGGAATCGAGGCCACTTCCATCCTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS GCA 72 bp AAGGGCTTTCAGATTTTACAGAAACGTTCCGGCTCTTaGCATCTCAGCCACATCAGGCCCGACTTAGGACCC +
Preference number: 6 (lower is better)
Translates to: KGFQILQKRSGS*HLSHIRPDLGP
Trigger: GGGTCCTAAGTCGGGCCTGATGTGGCTGAGATGGCAAGAGCCGGAACGTTTCTGTAAAATCTGAAAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS CCA 72 bp CCACATGCTCCAGATGGCGTCGTTACAGGATGGAAGTaGCCTCGATTCCCGAGTCACTGCTTAAAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: PHAPDGVVTGWK*PRFPSHCLKGR
Trigger: TCTTCCTTTTAAGCAGTGACTCGGGAATCGAGGCCACTTCCATCCTGTAACGACGCCATCTGGAGCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437101.5
ENST00000476897.5
CDS CAA 72 bp CAAGGGCTTTCAGATTTTACAGAAACGTTCCGGCTCTaGCCATCTCAGCCACATCAGGCCCGACTTAGGACC +
Preference number: 6 (lower is better)
Translates to: QGLSDFTETFRL*PSQPHQARLRT
Trigger: GGTCCTAAGTCGGGCCTGATGTGGCTGAGATGGCAAGAGCCGGAACGTTTCTGTAAAATCTGAAAGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476897.5
ENST00000491138.1
CDS TCA 72 bp CGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTCCGCACTCTGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: RMLVLNFRSRSS*MICRISALCLP
Trigger: AGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437101.5
CDS TCA 72 bp CGGATGTTGGTCTTAAACTTCAGGTCTAGGTCCAGCTaGATGATCTGCAGGATCTGTGGTGGAGTCACTCCG +
Preference number: 6 (lower is better)
Translates to: RMLVLNFRSRSS*MICRICGGVTP
Trigger: CGGAGTGACTCCACCACAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491138.1
CDS GCA 72 bp AGGCCAACACTCACTATGACTCGGTGGTGCCCGAGCTaGAGAAGACCCAAACTTGACTTTTCAAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RPTLTMTRWCPS*RRPKLDFSSFS
Trigger: AGAGAAGCTTGAAAAGTCAAGTTTGGGTCTTCTGCAGCTCGGGCACCACCGAGTCATAGTGAGTGTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460582.1
CDS GCA 72 bp GTCTCTGAAAAATTGGCTTCCATCTGTTGTGGCCAGTaGCAGAAGGTCTGGTTCTTGGAAAGTGGGACCGAC +
Preference number: 6 (lower is better)
Translates to: VSEKLASICCGQ*QKVWFLESGTD
Trigger: GTCGGTCCCACTTTCCAAGAACCAGACCTTCTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CAA 90 bp GAAGTGGCCTCGATTCCCGAGTCACTGCTTAAAAGGAAGATGTCCTaGGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTGCAAGAT +
Preference number: 6 (lower is better)
Translates to: EVASIPESLLKRKMS*ESGTDRQAFCYVQD
Trigger: ATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCAAGGACATCTTCCTTTTAAGCAGTGACTCGGGAATCGAGGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS CAA 90 bp TGGGATTCAGGCTACGATTGGTCTGTCCTTTGGGTCTCTGAAAAATaGGCTTCCATCTGTTGTGGCCAGTGCCAGAAGGTCTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: WDSGYDWSVLWVSEK*ASICCGQCQKVWFL
Trigger: CAAGAACCAGACCTTCTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS TCA 72 bp GGATTCAGGCTACGATTGGTCTGTCCTTTGGGTCTCTaGAAAATTGGCTTCCATCTGTTGTGGCCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: GFRLRLVCPLGL*KIGFHLLWPVP
Trigger: TGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CCA 72 bp GCTACGATTGGTCTGTCCTTTGGGTCTCTGAAAAATTaGCTTCCATCTGTTGTGGCCAGTGCCAGAAGGTCT +
Preference number: 6 (lower is better)
Translates to: ATIGLSFGSLKN*LPSVVASARRS
Trigger: AGACCTTCTGGCACTGGCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CCA 72 bp GAACAGACGAATACAGTGTGTCTCCCACTGAACTCTTaGGATTCAGGCTACGATTGGTCTGTCCTTTGGGTC +
Preference number: 6 (lower is better)
Translates to: EQTNTVCLPLNS*DSGYDWSVLWV
Trigger: GACCCAAAGGACAGACCAATCGTAGCCTGAATCCCAAGAGTTCAGTGGGAGACACACTGTATTCGTCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CAA 72 bp CAGACAGGCCTTCTGTTATGTGCAAGATGTTCTACCTaGTACAAGAGGTGTACACTGTGGTGGAGTCACTCC +
Preference number: 6 (lower is better)
Translates to: QTGLLLCARCST*YKRCTLWWSHS
Trigger: GGAGTGACTCCACCACAGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476897.5
CDS GCA 72 bp TGGAAAGTGGGACCGACAGACAGGCCTTCTGTTATGTaGAAGATGTTCTACCTTGTACAAGAGGTGTACACT +
Preference number: 6 (lower is better)
Translates to: WKVGPTDRPSVM*KMFYLVQEVYT
Trigger: AGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTGTCGGTCCCACTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418940.5
ENST00000476897.5
ENST00000494175.1
CDS CCA 72 bp AACTCTTGGGATTCAGGCTACGATTGGTCTGTCCTTTaGGTCTCTGAAAAATTGGCTTCCATCTGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: NSWDSGYDWSVL*VSEKLASICCG
Trigger: GCCACAACAGATGGAAGCCAATTTTTCAGAGACCCAAAGGACAGACCAATCGTAGCCTGAATCCCAAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494175.1
CDS CAA 72 bp CAGACAGGCCTTCTGTTATGTGCAAGATGTTCTACCTaGTACAAGAGGTGTACACTCTTTGGGCATGATCTG +
Preference number: 6 (lower is better)
Translates to: QTGLLLCARCST*YKRCTLFGHDL
Trigger: CAGATCATGCCCAAAGAGTGTACACCTCTTGTACAAGGTAGAACATCTTGCACATAACAGAAGGCCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418940.5
ENST00000494175.1