RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XRRA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166435

Ensembl transcript IDs: ENST00000321448.12, ENST00000340360.10, ENST00000431210.2, ENST00000524430.1, ENST00000525407.5, ENST00000526047.1, ENST00000527087.5, ENST00000528219.5, ENST00000528819.1, ENST00000529400.5, ENST00000529926.1, ENST00000530280.1, ENST00000530562.5, ENST00000531449.5, ENST00000531849.5, ENST00000531852.5, ENST00000533598.5, ENST00000533990.1, ENST00000534041.5, ENST00000534798.5, ENST00000684022.1

Found 1381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTGCACACAGCCCCCATGCACAGCTCT +
Preference number: 1 (lower is better)
Translates to: STLRCGPGHRALGES*GTGRVVHTAPMHSS
Trigger: AGAGCTGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAG +
Preference number: 1 (lower is better)
Translates to: ELEEVAELGLALTQR*AGHGERGSPEHCAQ
Trigger: CTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCT +
Preference number: 1 (lower is better)
Translates to: VAPSLLPCAPTLYCR*ARHQVMPGPRRGDP
Trigger: AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTC +
Preference number: 1 (lower is better)
Translates to: WQNSSMNSRKWPNLG*LSLSAGQAMGSGVV
Trigger: GACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp CTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATG +
Preference number: 1 (lower is better)
Translates to: LAVGSWQNSSMNSRK*PNLGWLSLSAGQAM
Trigger: CATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR TCA 90 bp CAGGCCGGGTGGTGCACACAGCCCCCATGCACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTC +
Preference number: 1 (lower is better)
Translates to: QAGWCTQPPCTALAL*VTGCGLLAELIHEL
Trigger: GAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGTGTGCACCACCCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR GCA 90 bp ATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGA +
Preference number: 1 (lower is better)
Translates to: MHVAPSLLPCAPTLY*RWARHQVMPGPRRG
Trigger: TCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp GCCTCCAGGTACTGCTTGTGGTTCACCAGCCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTGCAGGAAAAGAAGCCAGGAGAGGCACC +
Preference number: 1 (lower is better)
Translates to: ASRYCLWFTSRRSVH*CRTAPAGKEARRGT
Trigger: GGTGCCTCTCCTGGCTTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 90 bp GAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTGGGCATCTCTGACTCCACAGAAGTG +
Preference number: 1 (lower is better)
Translates to: EQMGGSGTKVRQDGE*PSRFSVGISDSTEV
Trigger: CACTTCTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCT +
Preference number: 1 (lower is better)
Translates to: AWNSFNSLLASRYCL*FTSRRSVHWCRTAP
Trigger: AGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp TCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGTGGTTCACCAGCCGCCGTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: SPAAGNVPGTPSTAS*PPGTACGSPAAVLS
Trigger: GGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 90 bp CACCTGGGTCAGGAAGATGGACTCTGTGCTCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAGGCGGACAGTTGTGTCACTCAGGTG +
Preference number: 1 (lower is better)
Translates to: HLGQEDGLCALGVLI*WALWAEADSCVTQV
Trigger: CACCTGAGTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 90 bp AGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCG +
Preference number: 1 (lower is better)
Translates to: SLVSHWLWAPGRTHP*TRGSGRTWAGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp CAGCCAGCTCTGCCTCTGGCTCTAGCATATCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCG +
Preference number: 1 (lower is better)
Translates to: QPALPLALAYPLRET*LSSCAGDGAPEAAS
Trigger: CGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGCCAGAGGCAGAGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCAGGTTCTC +
Preference number: 1 (lower is better)
Translates to: GLFTMHSGVGADGRQ*HEGPARRGMAFQVL
Trigger: GAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR GCA 90 bp TGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGG +
Preference number: 1 (lower is better)
Translates to: CGLGSKKECMWHPVY*PVHPLFIAAGPGTR
Trigger: CCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCCAGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 90 bp CCTCTGGCTCTAGCATATCCTTTGAGGGAGACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCAGAGGCTGCTTCGGCACCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: PLALAYPLRETWLSS*AGDGAPEAASAPLG
Trigger: TCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp CAGTTGTGTCACTCAGGTGGGACAGGGTCTCTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAG +
Preference number: 1 (lower is better)
Translates to: QLCHSGGTGSLHYAQ*SWSRWEAVARRSGK
Trigger: CTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACCCTGTCCCACCTGAGTGACACAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 90 bp TCCTGCACTGACACAAGCCCTTTCTTTGCCTTTAGCCAGCAGGCGTaGACTGGATCTGGGATCCTGGCAGCTGTGGCAGAGCCGTACCTA +
Preference number: 1 (lower is better)
Translates to: SCTDTSPFFAFSQQA*TGSGILAAVAEPYL
Trigger: TAGGTACGGCTCTGCCACAGCTGCCAGGATCCCAGATCCAGTTCACGCCTGCTGGCTAAAGGCAAAGAAAGGGCTTGTGTCAGTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR GCA 90 bp TGGGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATTGCCCTGTaGACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCC +
Preference number: 1 (lower is better)
Translates to: WVPRKNACGTQSIAL*THSLLPLGQAPGHA
Trigger: GGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp CAGCACCTGCAGGAAAAGAAGCCAGGAGAGGCACCAAGCTCATCCTaGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCC +
Preference number: 1 (lower is better)
Translates to: QHLQEKKPGEAPSSS*FSPSQKQEDWVQRP
Trigger: GGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTCCTGGCTTCTTTTCCTGCAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR TCA 90 bp TGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTaGCAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGAT +
Preference number: 1 (lower is better)
Translates to: CHCWLPPLQLIRRAF*QRQRTWTRACPVGD
Trigger: ATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 90 bp TCTAGCATATCCTTTGAGGGAGACTTGGTTGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGCTTCGGCACCTTTGGGATTTCGCTT +
Preference number: 1 (lower is better)
Translates to: SSISFEGDLVVVMRG*WSTRGCFGTFGISL
Trigger: AAGCGAAATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GATCAGGCTTGGCTGTCAGCAGTTCTTCATAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCT +
Preference number: 1 (lower is better)
Translates to: DQAWLSAVLHSRGTC*EGRQLGVSSESLSP
Trigger: AGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATGAAGAACTGCTGACAGCCAAGCCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp ATGTTCCGGGGATCCCGCAAGCGAATGAAGATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: MFRGSRKRMKMSSRS*ALVFFGGGIGILWA
Trigger: GGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTCATTCGCTTGCGGGATCCCCGGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp GCACCAAGCTCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTaGGTCCAGAGACCCTTGGAAAATGGGATGGTGTGGCAGGAGGAT +
Preference number: 1 (lower is better)
Translates to: APSSSWFSPSQKQED*VQRPLENGMVWQED
Trigger: ATCCTCCTGCCACACCATCCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 90 bp AACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTaGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAG +
Preference number: 1 (lower is better)
Translates to: NLLSALGLEKVPGSL*TATAGCLLSNSSEE
Trigger: CTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp GGTTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTC +
Preference number: 1 (lower is better)
Translates to: GFIQPAVCFRIGEGT*ILVDCHCWLPPLQL
Trigger: GAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTGAATAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp TTTCTGAAGAGTGTCCAGCTTGGGCTTGGAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGAT +
Preference number: 1 (lower is better)
Translates to: FLKSVQLGLGGVAQE*VLQHLLQGLCILLD
Trigger: ATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp TCTCTTTGTGAACATAGGGTTTCTGAAGAGTGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGG +
Preference number: 1 (lower is better)
Translates to: SLCEHRVSEECPAWA*RSGTGVGASAFVAG
Trigger: CCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTCAGAAACCCTATGTTCACAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR GCA 90 bp GGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGA +
Preference number: 1 (lower is better)
Translates to: GLEKVPGSLWTATAG*LLSNSSEEHFDKDR
Trigger: TCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp AGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGG +
Preference number: 1 (lower is better)
Translates to: SILTKTEDLDQGMPC*GCFCQQGHGMESSG
Trigger: CCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTCAAAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 90 bp ATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATaGGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAAC +
Preference number: 1 (lower is better)
Translates to: IAPSWGHHPPKLCHQ*EHWVQVCIKHGITN
Trigger: GTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGTGGCACAGCTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp CAAGCGAATGAAGATGTCATCCAGAAGTTGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCTCTGGGCCCGTTTCTCTTTGTGAAC +
Preference number: 1 (lower is better)
Translates to: QANEDVIQKLGSSLL*GWNRDSLGPFLFVN
Trigger: GTTCACAAAGAGAAACGGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTCATTCGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 90 bp TGGAAAACCATTTTTAGAGGGAAGTGTGACAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATTGCCCTG +
Preference number: 1 (lower is better)
Translates to: WKTIFRGKCDNAAVA*VPRKNACGTQSIAL
Trigger: CAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCCCTCTAAAAATGGTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp GGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTAC +
Preference number: 1 (lower is better)
Translates to: GPGHALLGMFLSART*HGIKWADVLLFKQY
Trigger: GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 90 bp ACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTTGGTGCTGTATGTaGTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCA +
Preference number: 1 (lower is better)
Translates to: TWVKLRLCVDFWCCM*SGRCPMLDVLLWHS
Trigger: TGAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAAAAATCCACACACAGCCTAAGCTTAACCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 90 bp AATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTaGCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: NGLLAVAQHCGENVV*QQHKCVVKNFESSS
Trigger: ACTGCTGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
3UTR TCA 90 bp AGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGAT +
Preference number: 1 (lower is better)
Translates to: RALGSSLHQTWYYQR*ASSRALKSPSERID
Trigger: ATCTATTCTCTCACTAGGACTTTTAAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp CTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTaGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTC +
Preference number: 1 (lower is better)
Translates to: LLGMFLSARTWHGIK*ADVLLFKQYQSAFF
Trigger: GAAGAATGCACTTTGGTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp TTTCTCATACAACAGAGAACAAATGTATCCCTGTTGCATCTGAACTaGAAAACCATTTTTAGAGGGAAGTGTGACAATGCTGCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: FLIQQRTNVSLLHLN*KTIFRGKCDNAAVA
Trigger: GGCCACAGCAGCATTGTCACACTTCCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATACATTTGTTCTCTGTTGTATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp ATTAGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTTTACAGTTTGCTCCAATTTACTGTC +
Preference number: 1 (lower is better)
Translates to: IRSRDGVSMVYNYVF*HKLCPVYSLLQFTV
Trigger: GACAGTAAATTGGAGCAAACTGTAAACTGGACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 90 bp TATAGTCAGAGTCTTGTCTCTGGTGAACAATCTCAGACAAAAACATaGGTTAAGCTTAGGCTGTGTGTGGATTTTTGGTGCTGTATGTGC +
Preference number: 1 (lower is better)
Translates to: YSQSLVSGEQSQTKT*VKLRLCVDFWCCMC
Trigger: GCACATACAGCACCAAAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACCAGAGACAAGACTCTGACTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 90 bp GTCAGTTTCTCATACAACAGAGAACAAATGTATCCCTGTTGCATCTaGACTGGAAAACCATTTTTAGAGGGAAGTGTGACAATGCTGCTG +
Preference number: 1 (lower is better)
Translates to: VSFSYNREQMYPCCI*TGKPFLEGSVTMLL
Trigger: CAGCAGCATTGTCACACTTCCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATACATTTGTTCTCTGTTGTATGAGAAACTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 90 bp TTTAAACAGTACCAAAGTGCATTCTTCAATGTATGTTTGCCTGCTTaGAGCAAGGCCCAAGTTGAGAATACAGTAAAGGAAACTCATGAA +
Preference number: 1 (lower is better)
Translates to: FKQYQSAFFNVCLPA*SKAQVENTVKETHE
Trigger: TTCATGAGTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGAATGCACTTTGGTACTGTTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 2 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: GPGHRALGESWGTGRVVHRPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp CGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: RWAGHGERGSPEHCAQRAAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...GGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 2 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: CLGQGGEILTRGCHLVASALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGERPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGACCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQLVDCH*WLPPLQ
Trigger: TTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAG...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 2 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp CACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCAGGTTCTCAGTGGGCATCTCGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: HEGPARRGMAFQVLSGHLALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...GAGATGCCCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 2 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGTGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 2 (lower is better)
Translates to: LRCGPGHRALGESWGTGRWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp CGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 2 (lower is better)
Translates to: RWAGHGERGSPEHCAQRALASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...GGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 2 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSTLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTACCTGGATCCTTGTaGACTGCCACTGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRVPGSL*TATAGC
Trigger: GCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTAC...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp GGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: GSWQNSSMNSRKWPN*GWLSLSAGQAMGSG
Trigger: CCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 2 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: CLGQGGEILTRGCHLVASLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKERPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCTGTGTGTGGATTTTTaGTGCTGTATGTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GPGHRALGESWGTGRVVHLCVDF*CCMCSG
Trigger: CCCAGAGCACATACAGCACCAAAAATCCACACACAG...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCAAAGACAGAGGACTTaGACCAGGGCATGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRQRQRT*TRACPV
Trigger: AACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 2 (lower is better)
Translates to: CLGQGGEILTRGCHLVASLASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCA +
Preference number: 2 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSNAAVA*VPRKNA
Trigger: TGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCAC +
Preference number: 2 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRIGEGT*ILVDCH
Trigger: GTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAAT...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 2 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGRQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCTCTATCTTAAGCCCTaGTTCAGGACCTTAACATGC +
Preference number: 2 (lower is better)
Translates to: GPGHRALGESWGTGRVVHLYLKP*FRTLTC
Trigger: GCATGTTAAGGTCCTGAACCAGGGCTTAAGATAGAG...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: NACGTQSIALCTHSL*PLGQAPGHAWAKEG
Trigger: CCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 2 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GTGGTGCACACAGCCCCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: VVHTAPMHSSSLVSHWLWWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...CCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGTGTGCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 2 (lower is better)
Translates to: EQMGGSGTKVRQDGEWPSTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...GGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACAGCCCCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 2 (lower is better)
Translates to: TAPMHSSSLVSHWLWAPGWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...GCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CAA 90 bp CGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGTACTGCTaGTGGTTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: RAWNSFNSLLASRYC*WFTSRRSVHWCRTA
Trigger: TGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCAGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: LEEWHRSGCFSICCRACAVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: AELIHELEEVAELGLALTAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 2 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp AAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 2 (lower is better)
Translates to: KEGSWEFPPSPFHLSGCRAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...ACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGTGCTGTATGTGCTCTaGGAGATGCCCCATGTTGGA +
Preference number: 2 (lower is better)
Translates to: CLGQGGEILTRGCHLVASVLYVL*EMPHVG
Trigger: TCCAACATGGGGCATCTCCCAGAGCACATACAGCAC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CAA 90 bp CCAGCTCTGCCTCTGGCTCTAGCATATCCTTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCGGCA +
Preference number: 2 (lower is better)
Translates to: PALPLALAYPLRETW*SSCAGDGAPEAASA
Trigger: TGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGCCAGAGGCAGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp ATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTGGGCCCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: IQKLGSSLLWGWNRDSLGPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 2 (lower is better)
Translates to: EEWHRSGCFSICCRACAFMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAACTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: FTSRRSVHWCRTAPAGKELGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...TTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTT +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEWHPVY*PVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCA...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: KAGLGRGGQETDSRESAERPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 2 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: CESLAVGSWQNSSMNSRKWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...CTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAGAAAATGGGATGGTGTaGCAGGAGGATGCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPENGMV*QEDAKG
Trigger: CCCCTTAGCATCCTCCTGCCACACCATCCCATTTTC...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 90 bp CTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LWPGFQERMHVAPSL*PCAPTLYCRWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCCAGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCATGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 2 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 2 (lower is better)
Translates to: WSTLRCGPGHRALGESWGRDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 2 (lower is better)
Translates to: FTSRRSVHWCRTAPAGKEGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...TTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCGGTTCCAAGAAAGAATaGATGTGGCACCCAGTCTAT +
Preference number: 2 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGGSKKE*MWHPVY
Trigger: ATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 2 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp CTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 2 (lower is better)
Translates to: LAVGSWQNSSMNSRKWPNPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...GTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CAA 90 bp CTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTaGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LPLLAASSPTHQKSI*TKTEDLDQGMPCWG
Trigger: TCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp TCAGCAGTTCTTCATAGCCGTGGTACTTGCTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTG +
Preference number: 2 (lower is better)
Translates to: SAVLHSRGTCWEGRQ*GVSSESLSPLWVPL
Trigger: CAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATGAAGAACTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 2 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAACGAATATACAGGATaGCACTGTCCCTGCACATTA +
Preference number: 2 (lower is better)
Translates to: CLGQGGEILTRGCHLVASNEYTG*HCPCTL
Trigger: TAATGTGCAGGGACAGTGTCATCCTGTATATTCGTT...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTG +
Preference number: 2 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIMCSGR*PMLDVL
Trigger: CAAGACATCCAACATGGGGCATCTCCCAGAGCACAT...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGCAATGTATGTTTGCCTaGTTGAAGCAAGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEQCMFA*LKQGPS
Trigger: ACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTG...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATCACTGACTTCCTACTaGCCCTATGCATTGACTCTA +
Preference number: 2 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPSLTSY*PYALTL
Trigger: TAGAGTCAATGCATAGGGGCAGTAGGAAGTCAGTGA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp CTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: LAVGSWQNSSMNSRKWPNLSART*HGIKWA
Trigger: AGCCCACTTGATTCCATGCCATGTCCTTGCTGACAG...GTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCACCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 2 (lower is better)
Translates to: LEEWHRSGCFSICCRACAPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp ATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTGGGCTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 2 (lower is better)
Translates to: IQKLGSSLLWGWNRDSLGWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 90 bp AGTAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAAT +
Preference number: 2 (lower is better)
Translates to: SSCWPWFQINIAAGR*PLLGATTLQSCATN
Trigger: ATTGGTGGCACAGCTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTATATTAATCTGGAACCAGGGCCAACAGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp AGTTGCTCTCTAAGGGCCTTTCCTGCACTGACACAAGCCCTTTCTTaGCCTTTAGCCAGCAGGCGTGAACTGGATCTGGGATCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SCSLRAFPALTQALS*PLASRRELDLGSWQ
Trigger: CTGCCAGGATCCCAGATCCAGTTCACGCCTGCTGGCTAAAGGCAAAGAAAGGGCTTGTGTCAGTGCAGGAAAGGCCCTTAGAGAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 2 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 2 (lower is better)
Translates to: TNESIGFKFASNMVLPTLGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 2 (lower is better)
Translates to: VGISDSTEVLLVVGRSSATLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAACTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: GLFTMHSGVGADGRQWHELPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GAGAGGCACCAAGCTCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: ERHQAHPGSHLARSKRIGYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...CCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp AAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTCTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 2 (lower is better)
Translates to: KEGSWEFPPSPFHLSGCRLHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...ACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 2 (lower is better)
Translates to: AELIHELEEVAELGLALTPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCAGACACACGCACCAATaGTGGGGATACCCCCAAATG +
Preference number: 2 (lower is better)
Translates to: LSPNLISHQSWQQLGIPFRHTHQ*WGYPQM
Trigger: CATTTGGGGGTATCCCCATCATTGGTGCGTGTGTCT...GAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR-3UTR TCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGGGCCTTTCCTGCACTaGCACAAGCCCTTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCGPFLH*HKPFLC
Trigger: GCAAAGAAAGGGCTTGTGTCAGTGCAGGAAAGGCCC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTT +
Preference number: 2 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDWHPVY*PVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCA...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAGGAGATGCCCCATGTTaGATGTCTTGCTTTGGCATT +
Preference number: 2 (lower is better)
Translates to: FTSRRSVHWCRTAPAGKEGDAPC*MSCFGI
Trigger: AATGCCAAAGCAAGACATCCAACATGGGGCATCTCC...TTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGCAGATTGCCCCTTCTTaGGGCCACCACCCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMQIAPS*GHHPPK
Trigger: CTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTG...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGGCGTGAACTGGATCTaGGATCCTGGCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCGVNWI*DPGSCG
Trigger: GCCACAGCTGCCAGGATCCCAGATCCAGTTCACGCC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 90 bp TTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAA +
Preference number: 2 (lower is better)
Translates to: FNLLSALGLEKVPGS*WTATAGCLLSNSSE
Trigger: TTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp TGGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCCTaGGAAAATGGGATGGTGTGGCAGGAGGATGCTAAGGGGCTAAAA +
Preference number: 2 (lower is better)
Translates to: WFSPSQKQEDWVQRP*ENGMVWQEDAKGLK
Trigger: TTTTAGCCCCTTAGCATCCTCCTGCCACACCATCCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTACCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp AAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 2 (lower is better)
Translates to: KEGSWEFPPSPFHLSGCRAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...ACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 2 (lower is better)
Translates to: EEWHRSGCFSICCRACAFNHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR GCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTTGTGTGGATTTTTGGTaGTGTATGTGCTCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTCVDFW*CMCSGR
Trigger: TCTCCCAGAGCACATACAGCACCAAAAATCCACACA...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTaGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTT +
Preference number: 2 (lower is better)
Translates to: VLYVLWEMPHVGCLA*AFRMAVEIRSRDGV
Trigger: AACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 90 bp GAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGG +
Preference number: 2 (lower is better)
Translates to: EHFDKDRGLGPGHAL*GMFLSARTWHGIKW
Trigger: CCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTCAAAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAATCTTCAATGTATGTTTaGCTGCTTGAAGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: KAGLGRGGQETDSRESAESSMYV*LLEARP
Trigger: GGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGA...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 2 (lower is better)
Translates to: EEWHRSGCFSICCRACAFKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTAGCTTAGGCTGTGTGTaGATTTTTGGTGCTGTATGT +
Preference number: 2 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTSLGCV*IFGAVC
Trigger: ACATACAGCACCAAAAATCCACACACAGCCTAAGCT...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCAAGAGAAAGCAGGTCTaGGGCGGGGTGGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVKRKQV*GGVVRR
Trigger: TCTCCTGACCACCCCGCCCCAGACCTGCTTTCTCTT...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp ATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTGGGCCTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 2 (lower is better)
Translates to: IQKLGSSLLWGWNRDSLGLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: AELIHELEEVAELGLALTMSSRS*ALVFFG
Trigger: CCCAAAGAAGACTAGAGCCCAACTTCTGGATGACAT...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CAA 90 bp TCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTaGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: SSPTHQKSILTKTED*DQGMPCWGCFCQQG
Trigger: TCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCATTTAGCCAGCAGGCGTaGACTGGATCTGGGATCCTG +
Preference number: 2 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPFSQQA*TGSGIL
Trigger: CAGGATCCCAGATCCAGTTCACGCCTGCTGGCTAAA...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp GTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGCTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VPFRKLTSTQQAAFYILELVDCH*WLPPLQ
Trigger: TTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAG...CTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCA +
Preference number: 2 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCNAAVA*VPRKNA
Trigger: TGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATT...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAGCCTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: TSRRSVHWCRTAPAGKEAYNYVF*HKLCPV
Trigger: AACTGGACATAACTTATGCCAAAAGACGTAGTTGTA...GGCTTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAA +
Preference number: 2 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCQGMPC*GCFCQQ
Trigger: TTGCTGACAGAAACATCCCCAACAGGGCATGCCCTG...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGTGGACTGCCACTGCTaGCTGCCTCCTCTCCAACTC +
Preference number: 2 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYVDCHC*LPPLQL
Trigger: GAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCAC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAAAAAGTGCCAAGACTaGATGTGCAGATTGTTCTAT +
Preference number: 2 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIKKCQD*MCRLFY
Trigger: ATAGAACAATCTGCACATCCAGTCTTGGCACTTTTT...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TCCCTGCCTCACGCTGGCTCTCCTTTTGTCCATCTACATGTAGAGACTGATGTAGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 2 (lower is better)
Translates to: SLPHAGSPFVHLHVETDVVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...TACATCAGTCTCTACATGTAGATGGACAAAAGGAGAGCCAGCGTGAGGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCACTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: LVLYVLWEMPHVGCLALALSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTGTCCAGTTTACAGTTTaGTCCAATTTACTGTCATGT +
Preference number: 2 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTVQFTV*SNLLSC
Trigger: ACATGACAGTAAATTGGAGCAAACTGTAAACTGGAC...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTGGGATGGGGTTTCCATaGTGTACAACTACGTCTTTT +
Preference number: 2 (lower is better)
Translates to: GVGASAFVAGLVHSSGFPGMGFP*CTTTSF
Trigger: AAAAGACGTAGTTGTACACCATGGAAACCCCATCCC...AGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR TCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 2 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAARDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGGGTTCCAAGAAAGAATaGATGTGGCACCCAGTCTAT +
Preference number: 2 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMGSKKE*MWHPVY
Trigger: ATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 2 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 2 (lower is better)
Translates to: TNESIGFKFASNMVLPTLTLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCA +
Preference number: 2 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLNAAVA*VPRKNA
Trigger: TGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATT...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACTCTCAGACAAAAACATaGGTTAAGCTTAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDSQTKT*VKLRLC
Trigger: ACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGA...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 2 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYSRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp TCCCTGCCTCACGCTGGCTCTCCTTTTGTCCATCTACATGTAGAGACTGATGTAAGCTTAGGCTGTGTGTaGATTTTTGGTGCTGTATGT +
Preference number: 2 (lower is better)
Translates to: SLPHAGSPFVHLHVETDVSLGCV*IFGAVC
Trigger: ACATACAGCACCAAAAATCCACACACAGCCTAAGCT...TACATCAGTCTCTACATGTAGATGGACAAAAGGAGAGCCAGCGTGAGGCAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGACAGAGGACTTaGACCAGGGCATGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYQRQRT*TRACPV
Trigger: AACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTG...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 2 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCCCAGCAGGCGTGAACTaGATCTGGGATCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: TVKETHESGCSVYSQSLVPAGVN*IWDPGS
Trigger: GCTGCCAGGATCCCAGATCCAGTTCACGCCTGCTGG...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR TCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGGCAGGAGGATCATTTaGGCTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: KFLANGLLAVAQHCGENVGRRII*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAATGATCCTCCTGCC...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
3UTR-3UTR GCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTG +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERMCSGR*PMLDVL
Trigger: CAAGACATCCAACATGGGGCATCTCCCAGAGCACAT...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCA +
Preference number: 2 (lower is better)
Translates to: TVKETHESGCSVYSQSLVTATAG*LLSNSS
Trigger: TGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGT...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACCTTGGAAAATGGGATaGTGTGGCAGGAGGATGCTA +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERPWKMG*CGRRML
Trigger: TAGCATCCTCCTGCCACACCATCCCATTTTCCAAGG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR TCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTT +
Preference number: 2 (lower is better)
Translates to: TVKETHESGCSVYSQSLVWYYQR*ASSRAL
Trigger: AAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 2 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR GCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGTCCAGTTTACAGTTTaGTCCAATTTACTGTCATGT +
Preference number: 2 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCVQFTV*SNLLSC
Trigger: ACATGACAGTAAATTGGAGCAAACTGTAAACTGGAC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 2 (lower is better)
Translates to: TNESIGFKFASNMVLPTLKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAA +
Preference number: 2 (lower is better)
Translates to: TVKETHESGCSVYSQSLVQGMPC*GCFCQQ
Trigger: TTGCTGACAGAAACATCCCCAACAGGGCATGCCCTG...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGAGTAGCTGTTGGCCCTaGTTCCAGATTAATATAGCA +
Preference number: 2 (lower is better)
Translates to: VPFRKLTSTQQAAFYILESSCWP*FQINIA
Trigger: TGCTATATTAATCTGGAACCAGGGCCAACAGCTACT...CTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR-3UTR CCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATATGGCCTTTCCAGCTTaGGAAGTCACTGACTTCCTA +
Preference number: 2 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHMAFPA*EVTDFL
Trigger: TAGGAAGTCAGTGACTTCCCAAGCTGGAAAGGCCAT...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAAGCAAGGCCCAAGTTaGGAATACAGTAAAGGAAAC +
Preference number: 2 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLKQGPS*EYSKGN
Trigger: GTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACAATGTATGTTTGCCTaGTTGAAGCAAGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERQCMFA*LKQGPS
Trigger: ACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTCTTCAATGTATGTTTaGCTGCTTGAAGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHSSMYV*LLEARP
Trigger: GGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGTGCTGTATGTGCTCTaGGAGATGCCCCATGTTGGA +
Preference number: 2 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFVLYVL*EMPHVG
Trigger: TCCAACATGGGGCATCTCCCAGAGCACATACAGCAC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATAAGCAAGGCCCAAGTTaGGAATACAGTAAAGGAAAC +
Preference number: 2 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHKQGPS*EYSKGN
Trigger: GTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTT...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTTTTTGGTGCTGTATGTaGTCTGGGAGATGCCCCATG +
Preference number: 2 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFFWCCM*SGRCPM
Trigger: CATGGGGCATCTCCCAGAGCACATACAGCACCAAAA...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 2 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 90 bp CCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCCCTGTaGCATCTGAACTGGAAAACCATTTTTAGAGGGAAGTGTGACAAT +
Preference number: 2 (lower is better)
Translates to: PWCQFLIQQRTNVSL*HLNWKTIFRGKCDN
Trigger: ATTGTCACACTTCCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR GCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTCAAATTGGAAAAAGTaGCAAGACTGGATGTGCAGA +
Preference number: 2 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHSNWKK*QDWMCR
Trigger: TCTGCACATCCAGTCTTGGCACTTTTTCCAATTTGA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR TCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGATATCCCTGTTGCATCTaGACTGGAAAACCATTTTTA +
Preference number: 2 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERYPCCI*TGKPFL
Trigger: TAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATA...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTAAAAAAGTGCCAAGACTaGATGTGCAGATTGTTCTAT +
Preference number: 2 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLKKCQD*MCRLFY
Trigger: ATAGAACAATCTGCACATCCAGTCTTGGCACTTTTT...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR-3UTR CCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: TVKETHESGCSVYSQSLVYNYVF*HKLCPV
Trigger: AACTGGACATAACTTATGCCAAAAGACGTAGTTGTA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCATGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 3 (lower is better)
Translates to: RSRAQSPRGELGHRPGGACTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp GAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACAC +
Preference number: 3 (lower is better)
Translates to: EVAELGLALTQR*AGHGERGSPEH
Trigger: GTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 3 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGACACAAGCCCTTTCTTaGCCTTTAGCCAGCAGGCGT +
Preference number: 3 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQTQALS*PLASRR
Trigger: ACGCCTGCTGGCTAAAGGCAAAGAAAGGGCTTGTGT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp AACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCA +
Preference number: 3 (lower is better)
Translates to: NLGWLSLSAGQAMGSGVVPGHAL*GMFLSA
Trigger: TGCTGACAGAAACATCCCCAACAGGGCATGCCCTGG...GACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR GCA 72 bp GCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: APSLLPCAPTLY*RWARHQVMPGP
Trigger: TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp GGAGGCAGTGGCACGAAGGTCCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTGGGCATCTCTGACTCC +
Preference number: 3 (lower is better)
Translates to: GGSGTKVRQDGE*PSRFSVGISDS
Trigger: GGAGTCAGAGATGCCCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTT +
Preference number: 3 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKVAPSL*PCAPTL
Trigger: AAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCAC...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 3 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 3 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp AGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: SLLPCAPTLYCR*ARHQVMPGPRR
Trigger: CCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp GCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGTGGTTCACCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: AGNVPGTPSTAS*PPGTACGSPAA
Trigger: GGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp GGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: GSWQNSSMNSRK*PNLGWLSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp AACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 3 (lower is better)
Translates to: NLGWLSLSAGQAMGSGVVALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...GACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 72 bp TCCTTTGAGGGAGACTTGGTTGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGCTTCGGCACCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SFEGDLVVVMRG*WSTRGCFGTFG
Trigger: CCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 72 bp TGGTGCACACAGCCCCCATGCACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTCCTGGCAGAACTCATC +
Preference number: 3 (lower is better)
Translates to: WCTQPPCTALAL*VTGCGLLAELI
Trigger: GATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGTGTGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp ACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGACGGGGAATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: TMHSGVGADGRQ*HEGPARRGMAF
Trigger: GAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCGCATTGGGTTCAAGTTaGCATCAAACATGGTATTAC +
Preference number: 3 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSALGSS*HQTWYY
Trigger: GTAATACCATGTTTGATGCAAACTTGAACCCAATGC...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGAACCTGATACACTGTTaGTTTACTCTCAACTCTTTG +
Preference number: 3 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQNLIHC*FTLNSL
Trigger: CAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 3 (lower is better)
Translates to: CLGQGGEILTRGCHLVASHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 72 bp CAGGAAGATGGACTCTGTGCTCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAGGCGGACAGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: QEDGLCALGVLI*WALWAEADSCV
Trigger: GACACAACTGTCCGCCTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCATCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 72 bp AGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SHWLWAPGRTHP*TRGSGRTWAGS
Trigger: AGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
3UTR GCA 72 bp TGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGCCGTTCTGTCCACTGG +
Preference number: 3 (lower is better)
Translates to: WNSFNSLLASRY*LWFTSRRSVHW
Trigger: CCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp TACTGCTTGTGGTTCACCAGCCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTGCAGGAAAAGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: YCLWFTSRRSVH*CRTAPAGKEAR
Trigger: CCTGGCTTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 3 (lower is better)
Translates to: KAGLGRGGQETDSRESAEKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAATCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 3 (lower is better)
Translates to: GLFTMHSGVGADGRQWHESFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: AELIHELEEVAELGLALTWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 3 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR GCA 72 bp CTAGCATATCCTTTGAGGGAGACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCAGAGGCTGCTTCGGCA +
Preference number: 3 (lower is better)
Translates to: LAYPLRETWLSS*AGDGAPEAASA
Trigger: TGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp CTGCCTCTGGCTCTAGCATATCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAG +
Preference number: 3 (lower is better)
Translates to: LPLALAYPLRET*LSSCAGDGAPE
Trigger: CTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGCCAGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp TACTGCTTGTGGTTCACCAGCCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTAGTGGAGCCTCTGTAATG +
Preference number: 3 (lower is better)
Translates to: YCLWFTSRRSVH*CRTAPSGASVM
Trigger: CATTACAGAGGCTCCACTAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531449.5
3UTR-3UTR CAA 90 bp AACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCTTTATAGTCAGAGTCTaGTCTCTGGTGAACAATCTC +
Preference number: 3 (lower is better)
Translates to: NLGWLSLSAGQAMGSGVVFIVRV*SLVNNL
Trigger: GAGATTGTTCACCAGAGACAAGACTCTGACTATAAA...GACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACC +
Preference number: 3 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAIAAGR*PLLGAT
Trigger: GGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTAT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp ACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAGCCCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 3 (lower is better)
Translates to: TSRRSVHWCRTAPAGKEAHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...GGCTTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 72 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: QPAVCFRIGEGT*ILVDCHCWLPP
Trigger: AGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp TGGCTGTCAGCAGTTCTTCATAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: WLSAVLHSRGTC*EGRQLGVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATGAAGAACTGCTGACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp AGTGTCCAGCTTGGGCTTGGAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATT +
Preference number: 3 (lower is better)
Translates to: SVQLGLGGVAQE*VLQHLLQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR TCA 72 bp CTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTaGCATGGTCAGGGGAGGCCCACACCTCAATTCAGT +
Preference number: 3 (lower is better)
Translates to: LKPQEVRWVVDH*HGQGRPTPQFS
Trigger: ACTGAATTGAGGTGTGGGCCTCCCCTGACCATGTCAGTGATCCACAACCCACCTCACTTCTTGGGGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR GCA 72 bp GGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTTATTGCCGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: GSKKECMWHPVY*PVHPLFIAAGP
Trigger: TGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 72 bp ATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCA +
Preference number: 3 (lower is better)
Translates to: IGEGTWILVDCH*WLPPLQLIRRA
Trigger: TGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 72 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTCTGGATTCCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: EEWHRSGCFSIC*RACAFFWIPFG
Trigger: GCCAAAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp TGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCTGTGCACCCACTCTTT +
Preference number: 3 (lower is better)
Translates to: CCCGLGSKKECM*HPVYCPVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp CTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCCTTaGAAAATGGGATGGTGTGGCAGGAGGATGCTAAGG +
Preference number: 3 (lower is better)
Translates to: LARSKRIGSRDP*KMGWCGRRMLR
Trigger: CCTTAGCATCCTCCTGCCACACCATCCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 72 bp CAGGAAAAGAAGCCAGGAGAGGCACCAAGCTCATCCTaGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGTC +
Preference number: 3 (lower is better)
Translates to: QEKKPGEAPSSS*FSPSQKQEDWV
Trigger: GACCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTCCTGGCTTCTTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR GCA 72 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCAGAAGAGCATTTTGAC +
Preference number: 3 (lower is better)
Translates to: KVPGSLWTATAG*LLSNSSEEHFD
Trigger: GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp ACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAAGGACATGGCATGGAA +
Preference number: 3 (lower is better)
Translates to: TKTEDLDQGMPC*GCFCQQGHGME
Trigger: TTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp CAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTaGGTGCCGTTGGTGGTTTCTTTTGGTCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: QLGVSSESLSPL*VPLVVSFGLSP
Trigger: AGGAGAAAGACCAAAAGAAACCACCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp GTCATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGCCCGTTTCTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: VIQKLGSSLLWG*NRDSLGPFLFV
Trigger: CACAAAGAGAAACGGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp GAAGATGTCATCCAGAAGTTGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCTCTGGGCCCGTTTCTC +
Preference number: 3 (lower is better)
Translates to: EDVIQKLGSSLL*GWNRDSLGPFL
Trigger: GAGAAACGGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CCA 72 bp TCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTaGGTCCAGAGACCCTTGGAAAATGGGATGGTGTGG +
Preference number: 3 (lower is better)
Translates to: SSWFSPSQKQED*VQRPLENGMVW
Trigger: CCACACCATCCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGGGAGATGCCCCATGTaGGATGTCTTGCTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCGRCPM*DVLLWH
Trigger: ATGCCAAAGCAAGACATCCAACATGGGGCATCTCCC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp TGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGGATGTCATCCAGAAGTaGGGCTCTAGTCTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: CESLAVGSWQNSSMNSRKDVIQK*GSSLLW
Trigger: CCAAAGAAGACTAGAGCCCAACTTCTGGATGACATC...CTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAGCTGTGTGTGGATTTTaGGTGCTGTATGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAAVCGF*VLYVLW
Trigger: CCAGAGCACATACAGCACCAAAAATCCACACACAGC...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp TCCCTGCCTCACGCTGGCTCTCCTTTTGTCCATCTACATGTAGAGACTGATGTACCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: SLPHAGSPFVHLHVETDVPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...TACATCAGTCTCTACATGTAGATGGACAAAAGGAGAGCCAGCGTGAGGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR TCA 72 bp TCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATaGGAGCATTGGGTTCAAGTTTGCATCAAACATGGT +
Preference number: 3 (lower is better)
Translates to: SWGHHPPKLCHQ*EHWVQVCIKHG
Trigger: ACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGTGGCACAGCTTTGGAGGGTGGTGGCCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 72 bp CGCTGGCTCTCCTTTTGTCCATCTACATGTAGAGACTaGTGTAGGCAGTTGCTCTCTAAGGGCCTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: RWLSFCPSTCRD*CRQLLSKGLSC
Trigger: GCAGGAAAGGCCCTTAGAGAGCAACTGCCTACATCAGTCTCTACATGTAGATGGACAAAAGGAGAGCCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR GCA 72 bp CCAGCTTGGGAAGTCACTGACTTCCTACTGCCCCTATaGATTGACTCTATCTTAAGCCCTGGTTCAGGACCT +
Preference number: 3 (lower is better)
Translates to: PAWEVTDFLLPL*IDSILSPGSGP
Trigger: AGGTCCTGAACCAGGGCTTAAGATAGAGTCAATGCATAGGGGCAGTAGGAAGTCAGTGACTTCCCAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 72 bp CCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCTaGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCC +
Preference number: 3 (lower is better)
Translates to: PNLSPNLISHQS*QQLGIPFLFPA
Trigger: GGCAGGAAAAAGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAGAGATTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR-3UTR CAA 90 bp TGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGCCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 3 (lower is better)
Translates to: CESLAVGSWQNSSMNSRKPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...CTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR-3UTR CAA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAAGTGGGCTGATGTGTaGTTATTTAAACAGTACCAA +
Preference number: 3 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIKWADV*LFKQYQ
Trigger: TTGGTACTGTTTAAATAACAACACATCAGCCCACTT...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACC +
Preference number: 3 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYIAAGR*PLLGAT
Trigger: GGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTAT...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp TGCATTCTTCTGGATTCCCTTTGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAGCAGTTCTTCATAGCC +
Preference number: 3 (lower is better)
Translates to: CILLDSLWLNEG*IRLGCQQFFIA
Trigger: GGCTATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAGAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR-3UTR CAA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTACAAATGTATCCCTGTaGCATCTGAACTGGAAAACC +
Preference number: 3 (lower is better)
Translates to: LPQPDLSSELAATWDSFPTNVSL*HLNWKT
Trigger: GGTTTTCCAGTTCAGATGCAACAGGGATACATTTGT...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR GCA 72 bp ACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTTGGTaGTGTATGTGCTCTGGGAGATGCCCCATGTTGGAT +
Preference number: 3 (lower is better)
Translates to: TWVKLRLCVDFW*CMCSGRCPMLD
Trigger: ATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAAAAATCCACACACAGCCTAAGCTTAACCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 72 bp TTTGTCCATCTACATGTAGAGACTGATGTAGGCAGTTaGTCTCTAAGGGCCTTTCCTGCACTGACACAAGCC +
Preference number: 3 (lower is better)
Translates to: FVHLHVETDVGS*SLRAFPALTQA
Trigger: GGCTTGTGTCAGTGCAGGAAAGGCCCTTAGAGAGCAACTGCCTACATCAGTCTCTACATGTAGATGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CCA 72 bp AAACCATTTTTAGAGGGAAGTGTGACAATGCTGCTGTaGCCTGGGTTCCAAGAAAGAATGCATGTGGCACCC +
Preference number: 3 (lower is better)
Translates to: KPFLEGSVTMLL*PGFQERMHVAP
Trigger: GGGTGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCCCTCTAAAAATGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp TTTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTaGATGTCTTGCTTTGGCATTCAGAATGGCAGTAGA +
Preference number: 3 (lower is better)
Translates to: FGAVCALGDAPC*MSCFGIQNGSR
Trigger: TCTACTGCCATTCTGAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGCCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 3 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCA +
Preference number: 3 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLPGHAL*GMFLSA
Trigger: TGCTGACAGAAACATCCCCAACAGGGCATGCCCTGG...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR GCA 72 bp TGTGTGGATTTTTGGTGCTGTATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTGCTTTGGCATTCAGAA +
Preference number: 3 (lower is better)
Translates to: CVDFWCCMCSGR*PMLDVLLWHSE
Trigger: TTCTGAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAAAAATCCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp CTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTaGATTTTTGGTGCTGTATGTGCTCTGGGAGATGCC +
Preference number: 3 (lower is better)
Translates to: LRQKHGLSLGCV*IFGAVCALGDA
Trigger: GGCATCTCCCAGAGCACATACAGCACCAAAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp CATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCTGATGTGTTGTTATTT +
Preference number: 3 (lower is better)
Translates to: HALLGMFLSART*HGIKWADVLLF
Trigger: AAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGTTTGTTAAGATCCCCTaGGTGTCAGTTTCTCATACA +
Preference number: 3 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMFVKIP*VSVSHT
Trigger: TGTATGAGAAACTGACACCAAGGGGATCTTAACAAA...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGAGAGCTGGCAGCAACTaGGGATTCCTTTCCTTTTTC +
Preference number: 3 (lower is better)
Translates to: VPFRKLTSTQQAAFYILERAGSN*GFLSFF
Trigger: GAAAAAGGAAAGGAATCCCAAGTTGCTGCCAGCTCT...CTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR TCA 72 bp GGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAG +
Preference number: 3 (lower is better)
Translates to: GSSLHQTWYYQR*ASSRALKSPSE
Trigger: CTCACTAGGACTTTTAAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 3 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCCCATGTTGGATGTCTaGCTTTGGCATTCAGAATGG +
Preference number: 3 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYPMLDV*LWHSEW
Trigger: CCATTCTGAATGCCAAAGCAAGACATCCAACATGGG...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 3 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATCTGTCTGCTTTAGGATaGGAGAAGGTACCTGGATCC +
Preference number: 3 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHLSALG*EKVPGS
Trigger: GGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAG...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTAAATCAAGAACTAGTTaGAAGCCAAGGCAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCKSRTS*KPRQSK
Trigger: CTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTT...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 3 (lower is better)
Translates to: TVKETHESGCSVYSQSLVSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR GCA 72 bp TTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTaGCAGCAACACAAGTGCGTTGTCAAAAACTTTGAG +
Preference number: 3 (lower is better)
Translates to: LAVAQHCGENVV*QQHKCVVKNFE
Trigger: CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
3UTR CCA 72 bp GTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTaGTCTTTTGAACTGGTATCTAAACATACCTGGTTA +
Preference number: 3 (lower is better)
Translates to: VLRQPFPHQPIE*SFELVSKHTWL
Trigger: TAACCAGGTATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTGCCTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATCCCATGTTGGATGTCTaGCTTTGGCATTCAGAATGG +
Preference number: 3 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHPMLDV*LWHSEW
Trigger: CCATTCTGAATGCCAAAGCAAGACATCCAACATGGG...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp AGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTTTACAGTTTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: RDGVSMVYNYVF*HKLCPVYSLLQ
Trigger: TTGGAGCAAACTGTAAACTGGACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATAAATCAAGAACTAGTTaGAAGCCAAGGCAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHKSRTS*KPRQSK
Trigger: CTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTT...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CCA 72 bp ATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTaGGCTGATGTGTTGTTATTTAAACAGTACCAAAGT +
Preference number: 3 (lower is better)
Translates to: MFLSARTWHGIK*ADVLLFKQYQS
Trigger: ACTTTGGTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 72 bp TCATACAACAGAGAACAAATGTATCCCTGTTGCATCTaGACTGGAAAACCATTTTTAGAGGGAAGTGTGACA +
Preference number: 3 (lower is better)
Translates to: SYNREQMYPCCI*TGKPFLEGSVT
Trigger: TGTCACACTTCCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATACATTTGTTCTCTGTTGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR TCA 72 bp TTTCAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTaGATACATGCTCAGGTAGAGAAAGTCTCCATAGTA +
Preference number: 3 (lower is better)
Translates to: FQLVRVKCTYSP*IHAQVEKVSIV
Trigger: TACTATGGAGACTTTCTCTACCTGAGCATGTATTCAGGGGCTATAGGTACATTTAACTCTAACTAACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR-3UTR CAA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTAACCTGATACACTGTTaGTTTACTCTCAACTCTTTG +
Preference number: 3 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFNLIHC*FTLNSL
Trigger: CAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTT...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR GCA 72 bp GATCTAGGAAATGCATCTTTATACATGATTGTTAGCTaGTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: DLGNASLYMIVS*CSFLKKIVEKR
Trigger: TCTCTTTTCTACAATCTTCTTCAGAAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LRCGPGHRALGESWGTGRSLRGV*GGDVPV
Trigger: GACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCT...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGCTCCACTGCGGTGCCTaGCGCTATCTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LRCGPGHRALGESWGTGRLHCGA*RYLPHA
Trigger: GGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAG...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGGCCCTCGGGGAGAGCTaGGGCACAGGCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGALGES*GTGRVV
Trigger: CACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGC...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGCCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCTCCACTGCGGTGCCTaGCGCTATCTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCALHCGA*RYLPHA
Trigger: GGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAG...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQADGRQ*HEGPAR
Trigger: TCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTAGT +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHRRSVH*CRTAPS
Trigger: ACTAGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
CDS-3UTR CCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGALTQR*AGHGER
Trigger: CCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGC...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCCTGGCTGTGGGCTCCTaGCAGAACTCATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCLAVGS*QNSSMN
Trigger: GTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCGCGGCCACGTCCTCTaGCTACCTCGCGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASRGHVL*LPRASK
Trigger: CTTGCTGGCGCGAGGTAGTCAGAGGACGTGGCCGCG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SGRTWAGSHSALGRPWGAMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...CGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGCCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCTATGGGGACTTCCCCTaGCTCCATTCCAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCYGDFP*LHSSLL
Trigger: CAGTAGACTGGAATGGAGGCAGGGGAAGTCCCCATA...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCWHPVY*PVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCA...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCGGCTGGCAAAGCAACTaGGGTTGGAGAGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCGWQSN*GWRVCC
Trigger: ACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCC...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEADGRQ*HEGPAR
Trigger: TCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCTGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCATCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGASRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASALTQR*AGHGER
Trigger: CCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTCTGGCTGTGGGCTCCTaGCAGAACTCATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGLAVGS*QNSSMN
Trigger: GTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRARPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCARPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTTCTTCAGTCTCCTaGGCCCAGCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNTSSVS*AQPGWQ
Trigger: TTGCCAGCCTGGCTGGGCTCAGGAGACTGAAGAAGT...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGAAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRSLRGV*GGDVPV
Trigger: GACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCT...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQPTFSL*SNQTLG
Trigger: CCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGG...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCATGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGCGTTCTGTCCACTGGTaGAGGACAGCACCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: LRCGPGHRALGESWGTGRRSVHW*RTAPSG
Trigger: TCCACTAGGTGCTGTCCTGCACCAGTGGACAGAACG...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
CDS-3UTR GCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAGCACAGGCCGGGTGGTaGACACAGCCCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVAQAGW*TQPPCT
Trigger: TGTGCATGGGGGCTGTGTGCACCACCCGGCCTGTGC...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAGGCTTCCTCACACAGTaGTGCTTCAGCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAGFLTQ*CFSRKA
Trigger: GGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCC...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACTCCCCAAATCACAGATaGCCTCCACAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHSPNHR*PPQSGC
Trigger: ACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGA...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: LRCGPGHRALGESWGTGRPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSSRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKRPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHQGMPC*GCFCQQ
Trigger: TTGCTGACAGAAACATCCCCAACAGGGCATGCCCTG...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACAAAGACAGAGGACTTaGACCAGGGCATGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAQRQRT*TRACPV
Trigger: AACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTG...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGAAGAGAAAGCAGGTCTaGGGCGGGGTGGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRKRKQV*GGVVRR
Trigger: TCTCCTGACCACCCCGCCCCAGACCTGCTTTCTCTT...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCCAGCAGGCGTGAACTaGATCTGGGATCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAPAGVN*IWDPGS
Trigger: GCTGCCAGGATCCCAGATCCAGTTCACGCCTGCTGG...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGALSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTTTCCTCACACAGTGGTaGTTCAGCAGAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGFLTQW*FSRKAW
Trigger: CCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAA...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGAGATGCCTCCTGTTCTaGGACGGCCAAATTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCARCLLF*DGQIGR
Trigger: CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCT...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGTATGGGGACTTCCCCTaGCTCCATTCCAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQYGDFP*LHSSLL
Trigger: CAGTAGACTGGAATGGAGGCAGGGGAAGTCCCCATA...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCGTTCTGTCCACTGGTaGAGGACAGCACCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRRSVHW*RTAPVS
Trigger: AGAAACGGGTGCTGTCCTGCACCAGTGGACAGAACG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527087.5
CDS-3UTR CCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTCGCGAAGCAGATTTCTaGCTGGGAAGCAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGREADF*LGSSCS
Trigger: TGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCG...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGAATTGGGGCTCTTTATaGGGACTTCCCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQNWGSL*GLPLPP
Trigger: TGGAGGCAGGGGAAGTCCCCATAAAGAGCCCCAATT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCAATTGGGGCTCTTTATaGGGACTTCCCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSNWGSL*GLPLPP
Trigger: TGGAGGCAGGGGAAGTCCCCATAAAGAGCCCCAATT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGGGACCCCTCGTGTATaGGCCACCAGAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAGTPRV*ATRGLL
Trigger: TAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCARQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRTWAGSHSALGRPWGAGYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...CCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGSRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCTGGCTGTGGGCTCCTaGCAGAACTCATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRLAVGS*QNSSMN
Trigger: GTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ACAGCCCCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TAPMHSSSLVSHWLWAPGGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...GCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGTGCTGTATGTGCTCTaGGAGATGCCCCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQVLYVL*EMPHVG
Trigger: TCCAACATGGGGCATCTCCCAGAGCACATACAGCAC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp GGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GTQSIALCTHSL*PLGQAPGHAWA
Trigger: GGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGCCAGGAAGGTCCACCTaGTTTTCCCGCCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGPGRST*FSRRDS
Trigger: AGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGG...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCATCCATTCCAGTCTACTaGCTCGTCATAGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGASIPVY*LVIELN
Trigger: GTTCAGCTCTATGACGAGTCAGTAGACTGGAATGGA...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQLSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGATTCCCAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTCCGGCTGGTCAACCTTaGGGTGCGGTCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: WIPSRSWRKLFSSGGTPRPAGQP*GAVQGT
Trigger: TGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGG...ACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTGGGAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTTCACTTGTTTCTTTaGCTGCCTCCGGCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGELHLFL*LPPASL
Trigger: AAGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAG...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR GCA 90 bp GGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRTWAGSHSALGRPWGAGILGLD*SMNWGS
Trigger: AGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGAT...CCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGLASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASADGRQ*HEGPAR
Trigger: TCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACTGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGALSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGGAAGTGGCCGAACTTaGGCTGGCTCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASGSGRT*AGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSAGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCGGGGATGCCACCTTGTaGCCAGCAAGTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTGDATL*PASGAQ
Trigger: CTGGGCCCCACTTGCTGGCCACAAGGTGGCATCCCC...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAGGAGATGCCCCATGTTaGATGTCTTGCTTTGGCATT +
Preference number: 4 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAGDAPC*MSCFGI
Trigger: AATGCCAAAGCAAGACATCCAACATGGGGCATCTCC...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSLSART*HGIKWA
Trigger: AGCCCACTTGATTCCATGCCATGTCCTTGCTGACAG...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGGCGTGAACTGGATCTaGGATCCTGGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPGVNWI*DPGSCG
Trigger: GCCACAGCTGCCAGGATCCCAGATCCAGTTCACGCC...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGGGTCCAGAGACCCTTaGAAAATGGGATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAGSRDP*KMGWCG
Trigger: GCCACACCATCCCATTTTCCAAGGGTCTCTGGACCC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp CGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: RWAGHGERGSPEHCAQRANGAQI*WLPHTV
Trigger: CACTGTGTGAGGAAGCCATCAGATCTGTGCACCATT...GGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPIQLLI*VLKHPW
Trigger: CCAAGGATGCTTGAGGACTCAGATGAGCAACTGGAT...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCGTTCCTGGCCTTCAGTaGCTTCACAGGAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGVPGLQ*LHRKDL
Trigger: GAGATCCTTCCTGTGAAGTCACTGAAGGCCAGGAAC...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGLSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCCTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RWAGHGERGSPEHCAQRALSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...GGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGAAGCTGTGCCACCAATaGGAGCATTGGGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQKLCHQ*EHWVQV
Trigger: AACTTGAACCCAATGCTCTCATTGGTGGCACAGCTT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATGGGTTGTGGATCACTaGCATGGTCAGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRWVVDH*HGQGRP
Trigger: GGGCCTCCCCTGACCATGTCAGTGATCCACAACCCA...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGCTCCACTGCGGTGCCTaGCGCTATCTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQLHCGA*RYLPHA
Trigger: GGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAG...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGCCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGPTFSL*SNQTLG
Trigger: CCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGG...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACATGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCTGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: NLGWLSLSAGQAMGSGVVWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...GACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGLASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCGACTGCAGCATGAATTaGGGCTCTTTATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSDCSMN*GSLWGL
Trigger: AAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTC...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGACTGCAGCATGAATTaGGGCTCTTTATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQDCSMN*GSLWGL
Trigger: AAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGTCCTCAAGCATCCTTaGCTTGGACTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEVLKHP*LGLQHE
Trigger: TTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGAC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGELHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGTGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCAWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTQRWAGHGERGSPEHCASLLWG*NRDSLG
Trigger: GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACT...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEGSSLL*GWNRDS
Trigger: AGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GPGHRALGESWGTGRVVHMSSRS*ALVFFG
Trigger: CCCAAAGAAGACTAGAGCCCAACTTCTGGATGACAT...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTALTQR*AGHGER
Trigger: CCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGC...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGGAAGTGGCCGAACTTaGGCTGGCTCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAGSGRT*AGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGCTGGCTGTGGGCTCCTaGCAGAACTCATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKLAVGS*QNSSMN
Trigger: GTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GLFTMHSGVGADGRQWHEGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTTLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTCAGATTGCCCCTTCTTaGGGCCACCACCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPQIAPS*GHHPPK
Trigger: CTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTG...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGACGCCGTTCTGTCCACTaGTGCAGGACAGCACCCGTT +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRRRSVH*CRTAPV
Trigger: AACGGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527087.5
CDS-3UTR TCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCCAGGAAGGTCCACCTaGTTTTCCCGCCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKPGRST*FSRRDS
Trigger: AGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGTCCATTCCAGTCTACTaGCTCGTCATAGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGESIPVY*LVIELN
Trigger: GTTCAGCTCTATGACGAGTCAGTAGACTGGAATGGA...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGGCTTGGACTGCAGCATaGATTGGGGCTCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGAWTAA*IGALYG
Trigger: CCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGC...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTGTACCTATAGCCCCTaGATACATGCTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGCTYSP*IHAQVE
Trigger: CTCTACCTGAGCATGTATTCAGGGGCTATAGGTACA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGACCACGCCTTAGTAACTaGGACGCGACGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRPRLSN*DATADS
Trigger: ACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGG...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCCCACGCCTTAGTAACTaGGACGCGACGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAPRLSN*DATADS
Trigger: ACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGG...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GLFTMHSGVGADGRQWHESLRGV*GGDVPV
Trigger: GACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCT...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGAGATGCCTCCTGTTCTaGGACGGCCAAATTGGGCGG +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKERCLLF*DGQIGR
Trigger: CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCT...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGATGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTACGTTCTGTCCACTGGTaGAGGACAGCACCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVRSVHW*RTAPSG
Trigger: TCCACTAGGTGCTGTCCTGCACCAGTGGACAGAACG...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531449.5
CDS-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPLASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAMCSGR*PMLDVL
Trigger: CAAGACATCCAACATGGGGCATCTCCCAGAGCACAT...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGCAATGTATGTTTGCCTaGTTGAAGCAAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRCGPGHRALGESWGTGRQCMFA*LKQGPS
Trigger: ACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTG...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTCTTCAATGTATGTTTaGCTGCTTGAAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSSSMYV*LLEARP
Trigger: GGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGCTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKELVDCH*WLPPLQ
Trigger: TTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAG...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGACAGCATCCTCTTTTaGGATCTGTCCGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEDSILF*DLSGQH
Trigger: ATGTTGACCGGACAGATCGCAAAAGAGGATGCTGTC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGAAGCAGATTTCTGGCTaGGAAGCAGTTGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQKQISG*EAVVQV
Trigger: TACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCGCGAAGCAGATTTCTaGCTGGGAAGCAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAREADF*LGSSCS
Trigger: TGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCG...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGTCCTCAAGCATCCTTaGCTTGGACTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAVLKHP*LGLQHE
Trigger: TTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGAC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGGGACCCCTCGTGTATaGGCCACCAGAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAGTPRV*ATRGLL
Trigger: TAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAACGCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RGSPEHCAQRATHQLPVTPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...CGTTACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGATATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACTCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPSRGTC*EGRQLG
Trigger: TCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCT...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSMSSRS*ALVFFG
Trigger: CCCAAAGAAGACTAGAGCCCAACTTCTGGATGACAT...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGACCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGACCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSGRTWAGSHSALGRPWGPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...TCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCAGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSALTQR*AGHGER
Trigger: CCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGC...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCGGAAGTGGCCGAACTTaGGCTGGCTCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTGSGRT*AGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPMNSRK*PNLGWL
Trigger: GAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCAT...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTAGGCCTGTGGCCGGCTaGTCAACCTTGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTRPVAG*STLRCG
Trigger: ACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCT...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCTGTGTGTGGATTTTTaGTGCTGTATGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRLCVDF*CCMCSG
Trigger: CCCAGAGCACATACAGCACCAAAAATCCACACACAG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCTCTCAGACAAAAACATaGGTTAAGCTTAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCSQTKT*VKLRLC
Trigger: ACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGA...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGGTACCTGGATCCTTGTaGACTGCCACTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVVPGSL*TATAGC
Trigger: GCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTAC...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGAGACCCTTGGAAAATaGGATGGTGTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKETLGK*DGVAGG
Trigger: TCCTCCTGCCACACCATCCCATTTTCCAAGGGTCTC...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKNGAQI*WLPHTV
Trigger: CACTGTGTGAGGAAGCCATCAGATCTGTGCACCATT...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGAGGGCTGGAAACGTGTaGAATGCCTCTAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKERAGNV*NASRGS
Trigger: GCTGCCTCTAGAGGCATTTCACACGTTTCCAGCCCT...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGAGGGCTGGAAACGTGTaGAATGCCTCTAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQRAGNV*NASRGS
Trigger: GCTGCCTCTAGAGGCATTTCACACGTTTCCAGCCCT...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCCCACAGTCAGGCTGTTaGAGGAAAGGTCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGPQSGC*RKGPRI
Trigger: AATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGG...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCACTTCTTCAGTCTCCTaGGCCCAGCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTTSSVS*AQPGWQ
Trigger: TTGCCAGCCTGGCTGGGCTCAGGAGACTGAAGAAGT...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGCTTGGACTGCAGCATaGATTGGGGCTCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPAWTAA*IGALYG
Trigger: CCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGC...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAGCTTGGACTGCAGCATaGATTGGGGCTCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVAWTAA*IGALYG
Trigger: CCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGC...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCGATCCCGCAAGCGAATaGAGATGTCATCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGDPASE*RCHPEV
Trigger: AACTTCTGGATGACATCTTCATTCGCTTGCGGGATC...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGATCCCGCAAGCGAATaGAGATGTCATCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRADPASE*RCHPEV
Trigger: AACTTCTGGATGACATCTTCATTCGCTTGCGGGATC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCTGTACCTATAGCCCCTaGATACATGCTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGCTYSP*IHAQVE
Trigger: CTCTACCTGAGCATGTATTCAGGGGCTATAGGTACA...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGGAGACTTGGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCGGTTTAGCCAGCAGGCGTaGACTGGATCTGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GRLGCRHARVMEHQRLLRFSQQA*TGSGIL
Trigger: CAGGATCCCAGATCCAGTTCACGCCTGCTGGCTAAA...CCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LPQPDLSSELAATWDSFPSLRGV*GGDVPV
Trigger: GACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCT...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGPTFSL*SNQTLG
Trigger: CCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGATGCCTCCTGTTCTaGGACGGCCAAATTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTRCLLF*DGQIGR
Trigger: CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCT...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCTGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp ACAGCCCCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCTGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: TAPMHSSSLVSHWLWAPGWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...GCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCCATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: EQMGGSGTKVRQDGEWPSHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...GGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGCFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCCATGTTGGATGTCTTaGTTTGGCATTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGPCWMS*FGIQNG
Trigger: GCCATTCTGAATGCCAAAGCAAGACATCCAACATGG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKTATAG*LLSNSS
Trigger: TGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGT...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp ACTTGGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCGGCACCTCTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TWLSSCAGDGAPEAASAPLVDCH*WLPPLQ
Trigger: TTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAG...AGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTCCCCAAATCACAGATaGCCTCCACAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGSPNHR*PPQSGC
Trigger: ACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACA +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGQDTEV*QNPQIT
Trigger: TGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTG...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGQCLQR*EPQDVP
Trigger: AGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCCAAAGCAACTGGGGTTaGAGAGTCTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGQSNWG*RVCCHP
Trigger: TGGATGACAACAGACTCTCCAACCCCAGTTGCTTTG...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SGRTWAGSHSALGRPWGAFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...CGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQSRGTC*EGRQLG
Trigger: TCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCT...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGTATGGGGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PVAPGGSSSAVEGPLVYGEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...CCCATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGSLLWG*NRDSLG
Trigger: GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACT...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTAGT +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTRRSVH*CRTAPS
Trigger: ACTAGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000340360.10
CDS-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEMNSRK*PNLGWL
Trigger: GAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCAT...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRANAAVA*VPRKNA
Trigger: TGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATT...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGTGACAATGCTGCTGTaGCCTGGGTTCCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKVTMLL*PGFQER
Trigger: TCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCAC...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGCATCTCCTTGATCTTTaGCTTTGGGAATGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGHLLDL*LWEWPL
Trigger: AAGGGGCCATTCCCAAAGTCAAAGATCAAGGAGATG...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCAGAAGGCCATCTCCTTaGTCTTTGACTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGRRPSP*SLTLGM
Trigger: CATTCCCAAAGTCAAAGATCAAGGAGATGGCCTTCT...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACAGGCAGCAGGTTTTCTaGGGCATTGATATAAATCAC +
Preference number: 4 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNRQQVF*GIDINH
Trigger: GTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGCCACAGTCAGGCTGTTaGAGGAAAGGTCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGPQSGC*RKGPRI
Trigger: AATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGG...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSGRTWAGSHSALGRPWGNHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...TCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGNHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGACTCTCTCTCCTTTGTaGGTAAATGCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGTLSPL*VNASLM
Trigger: CATTAAGGAGGCATTTACTCACAAAGGAGAGAGAGT...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCCAGAATGAAAATGCTTaGAGTCATTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSQNENA*SHFPWP
Trigger: AGGCCAAGGAAAATGACTTCAAGCATTTTCATTCTG...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS-3UTR GCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCTTCACTTGTTTCTTTaGCTGCCTCCGGCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGLHLFL*LPPASL
Trigger: AAGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR GCA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCTTCCTCACACAGTGGTaGTTCAGCAGAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCFLTQW*FSRKAW
Trigger: CCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAA...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTTTCCTCACACAGTGGTaGTTCAGCAGAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPFLTQW*FSRKAW
Trigger: CCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAA...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATATGGGGACTTCCCCTaGCTCCATTCCAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPYGDFP*LHSSLL
Trigger: CAGTAGACTGGAATGGAGGCAGGGGAAGTCCCCATA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGACATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGGATTCCCAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTCAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: WIPSRSWRKLFSSGGTPRQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...ACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTGGGAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ATHQLPVTCLELLQQPLGILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTTTTGGTGCTGTATGTaGTCTGGGAGATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASFWCCM*SGRCPM
Trigger: CATGGGGCATCTCCCAGAGCACATACAGCACCAAAA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCCCAAATCACAGATaGCCTCCACAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRSPNHR*PPQSGC
Trigger: ACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGA...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACA +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKQDTEV*QNPQIT
Trigger: TGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGAGGCTGGCAAAGCAACTaGGGTTGGAGAGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRGWQSN*GWRVCC
Trigger: ACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCC...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGCTGGCAAAGCAACTaGGGTTGGAGAGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEGWQSN*GWRVCC
Trigger: ACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGACTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLLPLGQAPGHAWAKEGRLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...TCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWRQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTCTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPLHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVSRGTC*EGRQLG
Trigger: TCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCT...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ACAGCCCCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCTGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TAPMHSSSLVSHWLWAPGWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...GCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGACTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGAGGCACCAAGCTCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERHQAHPGSHLARSKRIGWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...CCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ESLAVGSWQNSSMNSRKWRRSVH*CRTAPA
Trigger: TGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...CCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCATCTCCTTGATCTTTaGCTTTGGGAATGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASHLLDL*LWEWPL
Trigger: AAGGGGCCATTCCCAAAGTCAAAGATCAAGGAGATG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASPWASS*GYLSEP
Trigger: TGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTACCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: ERGSPEHCAQRATHQLPVPWASS*GYLSEP
Trigger: TGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGG...TACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GGATTCCCAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFPVAPGGSSSAVEGPLVIQLLI*VLKHPW
Trigger: CCAAGGATGCTTGAGGACTCAGATGAGCAACTGGAT...CACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTGGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGRDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKLSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTATCCCTGTTGCATCTaGACTGGAAAACCATTTTTA +
Preference number: 4 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSYPCCI*TGKPFL
Trigger: TAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAGACTGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: CTVELEQMGGSGTKVRQDWYYQR*ASSRAL
Trigger: AAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCA...GTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACTCTCTCTCCTTTGTaGGTAAATGCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGTLSPL*VNASLM
Trigger: CATTAAGGAGGCATTTACTCACAAAGGAGAGAGAGT...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGTTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCAGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LEEWHRSGCFSICCRACAAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCCGGTAACGCAAAGCAACTGGGGTTaGAGAGTCTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: RGSPEHCAQRATHQLPVTQSNWG*RVCCHP
Trigger: TGGATGACAACAGACTCTCCAACCCCAGTTGCTTTG...CGTTACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQRLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCAGGTTCTCAGTGGGCATCTCTGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HEGPARRGMAFQVLSGHLWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...GAGATGCCCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VTGCGLLAELIHELEEVAEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...GGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVGSSLL*GWNRDS
Trigger: AGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCC...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LAVGSWQNSSMNSRKWPNMNSRK*PNLGWL
Trigger: GAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCAT...GTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCTGGCTGTGGGCTCCTaGCAGAACTCATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWLAVGS*QNSSMN
Trigger: GTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTTLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVLSART*HGIKWA
Trigger: AGCCCACTTGATTCCATGCCATGTCCTTGCTGACAG...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCAGTGGACTGCCACTGCTaGCTGCCTCCTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSVDCHC*LPPLQL
Trigger: GAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCAC...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 72 bp TCACTCACCTGGGTCAGGAAGATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGGCGCTCTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLTWVRKMDSVL*ESSSDGRSGLR
Trigger: CCTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGGTGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTIQLLI*VLKHPW
Trigger: CCAAGGATGCTTGAGGACTCAGATGAGCAACTGGAT...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKTRGLL*KTNSQR
Trigger: TCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGT...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVATRGLL*KTNSQR
Trigger: TCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGT...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAALGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPNHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAGGCAGAACTCATCCATaGACTCGAGGAAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSGRTHP*TRGSGR
Trigger: TCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCC...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTGGGCCTTTCCTGCACTaGCACAAGCCCTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLAELIHELEEVAELGLAGPFLH*HKPFLC
Trigger: GCAAAGAAAGGGCTTGTGTCAGTGCAGGAAAGGCCC...AGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTTTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTTGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCACGTTCTGTCCACTGGTaGAGGACAGCACCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSRSVHW*RTAPSG
Trigger: TCCACTAGGTGCTGTCCTGCACCAGTGGACAGAACG...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000340360.10
CDS-3UTR GCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTLASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: LLAELIHELEEVAELGLAQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...AGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTCTTCAATGTATGTTTaGCTGCTTGAAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASSSMYV*LLEARP
Trigger: GGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSTATAG*LLSNSS
Trigger: TGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGT...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCGGCTTCCTCACACAGTaGTGCTTCAGCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIGFLTQ*CFSRKA
Trigger: GGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCC...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCGACTGCAGCATGAATTaGGGCTCTTTATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGDCSMN*GSLWGL
Trigger: AAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTC...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGCAACATCCTTTTTCATaGGCAGTACAGTATAATCCA +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRQHPFS*AVQYNP
Trigger: TGGATTATACTGTACTGCCCATGAAAAAGGATGTTG...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGCAACATCCTTTTTCATaGGCAGTACAGTATAATCCA +
Preference number: 4 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGQHPFS*AVQYNP
Trigger: TGGATTATACTGTACTGCCCATGAAAAAGGATGTTG...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 4 (lower is better)
Translates to: FTMHSGVGADGRQWHEGPEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...CGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTRQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCGGAAGTGGCCGAACTTaGGCTGGCTCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: VGISDSTEVLLVVGRSSAGSGRT*AGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSATLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCGGGATGGGGTTTCCATaGTGTACAACTACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGGMGFP*CTTTSF
Trigger: AAAAGACGTAGTTGTACACCATGGAAACCCCATCCC...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGATTGCCCCTTCTTaGGGCCACCACCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTQIAPS*GHHPPK
Trigger: CTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTG...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAAGTAGCTGTTGGCCCTaGTTCCAGATTAATATAGCA +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTSSCWP*FQINIA
Trigger: TGCTATATTAATCTGGAACCAGGGCCAACAGCTACT...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGAGTGGTCTTTTGAACTaGTATCTAAACATACCTGGT +
Preference number: 4 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGESGLLN*YLNIPG
Trigger: ACCAGGTATGTTTAGATACCAGTTCAAAAGACCACT...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp CCTCTGGCTCTAGCATATCCTTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLALAYPLRETW*SSCAGDGAPEA
Trigger: AGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGCCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCACGCGGCCACGTCCTCTaGCTACCTCGCGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPRGHVL*LPRASK
Trigger: CTTGCTGGCGCGAGGTAGTCAGAGGACGTGGCCGCG...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCAGAAGGCCATCTCCTTaGTCTTTGACTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGRRPSP*SLTLGM
Trigger: CATTCCCAAAGTCAAAGATCAAGGAGATGGCCTTCT...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPLRLPF*TTNQCP
Trigger: AGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGLRLPF*TTNQCP
Trigger: AGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAA...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGTATGGGCTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QSLLEEALQQWRDPSCMGLRLPF*TTNQCP
Trigger: AGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAA...GCCCATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGACTCTTTCTTCCCCTTaGACTCAAAAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQTLSSP*TQKKSP
Trigger: AGGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGT...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCACTCTTTCTTCCCCTTaGACTCAAAAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGTLSSP*TQKKSP
Trigger: AGGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGT...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGCCAGGAAGGTCCACCTaGTTTTCCCGCCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLPGRST*FSRRDS
Trigger: AGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGG...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAGGCAGCAGGTTTTCTaGGGCATTGATATAAATCAC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASRQQVF*GIDINH
Trigger: GTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKRDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGTATGGGCGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: QSLLEEALQQWRDPSCMGAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...GCCCATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTGGGCACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IQKLGSSLLWGWNRDSLGTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSWYYQR*ASSRAL
Trigger: AAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCA...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAATAATCATTAAAGTTTaGCACACGCAGACACACGCA +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTIIIKV*HTQTHA
Trigger: TGCGTGTGTCTGCGTGTGTCAAACTTTAATGATTAT...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGCCTTGGCTTGATCTTTaGCTTTGGGAATGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQPWLDL*LWEWPL
Trigger: AAGGGGCCATTCCCAAAGTCAAAGATCAAGCCAAGG...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVSGCTS*LSAMLQ
Trigger: CTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVASGCTS*LSAMLQ
Trigger: CTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGACAGCATCCTCTTTTaGGATCTTGTTGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVDSILF*DLVVGQ
Trigger: CTGGCCTACAACAAGATCGCAAAAGAGGATGCTGTC...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp GGGGAATGGCCTTCCAGGTTCTCAGTGGGCATCTCTGACTCCACAGAAGTGCTTACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: GEWPSRFSVGISDSTEVLTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...AAGCACTTCTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAGGCCATTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKECFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GGGAGACTTGGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCGGTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GRLGCRHARVMEHQRLLRCFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...CCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTWHPVY*PVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCA...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGGGTTCCAAGAAAGAATaGATGTGGCACCCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVGSKKE*MWHPVY
Trigger: ATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCACAATGTATGTTTGCCTaGTTGAAGCAAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPQCMFA*LKQGPS
Trigger: ACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTG...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCAATGTATGTTTGCCTaGTTGAAGCAAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKQCMFA*LKQGPS
Trigger: ACTTGGGCCTTGCTTCAAGCAGGCAAACATACATTG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAACTTGGACCAGGGCATaGCCTGTTGGGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSTWTRA*PVGDVS
Trigger: AGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGT...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTACTTGGACCAGGGCATaGCCTGTTGGGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSATWTRA*PVGDVS
Trigger: AGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGT...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGTCAAATTGGAAAAAGTaGCAAGACTGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKSNWKK*QDWMCR
Trigger: TCTGCACATCCAGTCTTGGCACTTTTTCCAATTTGA...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCTTCCTACTGCCCCTATaGATTGACTCTATCTTAAGC +
Preference number: 4 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCFLLPL*IDSILS
Trigger: GCTTAAGATAGAGTCAATGCATAGGGGCAGTAGGAA...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTGGCTTCCTCACACAGTaGTGCTTCAGCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTGFLTQ*CFSRKA
Trigger: GGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCC...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGGGCTTCCTCACACAGTaGTGCTTCAGCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: ESLAVGSWQNSSMNSRKWGFLTQ*CFSRKA
Trigger: GGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCC...CCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAGGCTGGCAAAGCAACTaGGGTTGGAGAGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSGWQSN*GWRVCC
Trigger: ACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCC...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTAATTGGGGCTCTTTATaGGGACTTCCCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLAELIHELEEVAELGLANWGSL*GLPLPP
Trigger: TGGAGGCAGGGGAAGTCCCCATAAAGAGCCCCAATT...AGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGGTCCTCAAGCATCCTTaGCTTGGACTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWVLKHP*LGLQHE
Trigger: TTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGAC...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCCAACATCCTTTTTCATaGGCAGTACAGTATAATCCA +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGQHPFS*AVQYNP
Trigger: TGGATTATACTGTACTGCCCATGAAAAAGGATGTTG...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACGGGACCCCTCGTGTATaGGCCACCAGAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDGTPRV*ATRGLL
Trigger: TAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTCTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSALPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: VTGCGLLAELIHELEEVAVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...GGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: ESLAVGSWQNSSMNSRKWGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...CCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EEWHRSGCFSICCRACAFSRGTC*EGRQLG
Trigger: TCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCT...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWRLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQRLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGGAAGTGGCCGAACTTaGGCTGGCTCTCACTCAGCG +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCGSGRT*AGSHSA
Trigger: CGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KAGLGRGGQETDSRESAEMNSRK*PNLGWL
Trigger: GAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCAT...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: GLFTMHSGVGADGRQWHETLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRYNYVF*HKLCPV
Trigger: AACTGGACATAACTTATGCCAAAAGACGTAGTTGTA...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTGTGCTGTATGTGCTCTaGGAGATGCCCCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: LLAELIHELEEVAELGLAVLYVL*EMPHVG
Trigger: TCCAACATGGGGCATCTCCCAGAGCACATACAGCAC...AGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTAGCTTAGGCTGTGTGTaGATTTTTGGTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPSLGCV*IFGAVC
Trigger: ACATACAGCACCAAAAATCCACACACAGCCTAAGCT...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAGTGGACTGCCACTGCTaGCTGCCTCCTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAVDCHC*LPPLQL
Trigger: GAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCAC...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGTGGACTGCCACTGCTaGCTGCCTCCTCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCVDCHC*LPPLQL
Trigger: GAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCAC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCAGATTGCCCCTTCTTaGGGCCACCACCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSPNLISHQSWQQLGIPFQIAPS*GHHPPK
Trigger: CTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTG...GAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGCATTTTCCTTGGCCTTaGAGAACTTCAGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVHFPWP*RTSGHS
Trigger: TGAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATG...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS-3UTR CCA 90 bp ACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAGCCCATTTTCCTTGGCCTTaGAGAACTTCAGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: TSRRSVHWCRTAPAGKEAHFPWP*RTSGHS
Trigger: TGAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATG...GGCTTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCCTTGGAAAATGGGATaGTGTGGCAGGAGGATGCTA +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTPWKMG*CGRRML
Trigger: TAGCATCCTCCTGCCACACCATCCCATTTTCCAAGG...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 72 bp GGGTTCCAAGAAAGAATGCATGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GFQERMHVAPSL*PCAPTLYCRWA
Trigger: GGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTCTTTCTTGGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp TGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WPWFQINIAAGR*PLLGATTLQSC
Trigger: ACAGCTTTGGAGGGTGGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTATATTAATCTGGAACCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp GCGGGTGATGGAGCACCAGAGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCTTCCATGATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AGDGAPEAASAP*GFRFSPSMIPS
Trigger: GGAAGGAATCATGGAAGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
3UTR CAA 72 bp CTTCATAGCCGTGGTACTTGCTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHSRGTCWEGRQ*GVSSESLSPLW
Trigger: CCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACACAGAATGAAAATGCTTaGAGTCATTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: STLRCGPGHRALGESWGTQNENA*SHFPWH
Trigger: ATGCCAAGGAAAATGACTTCAAGCATTTTCATTCTG...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCCCACAGTCAGGCTGTTaGAGGAAAGGTCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIPQSGC*RKGPRI
Trigger: AATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGG...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCTCCATTCCAGTCTACTaGCTCGTCATAGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GTWILVDCHCWLPPLQLISIPVY*LVIELN
Trigger: GTTCAGCTCTATGACGAGTCAGTAGACTGGAATGGA...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASRDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGAACGAATATACAGGATaGCACTGTCCCTGCACATTA +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVNEYTG*HCPCTL
Trigger: TAATGTGCAGGGACAGTGTCATCCTGTATATTCGTT...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAAGCAAGGCCCAAGTTaGGAATACAGTAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPKQGPS*EYSKGN
Trigger: GTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTT...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCACTCTCTCTCCTTTGTaGGTAAATGCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGTLSPL*VNASLM
Trigger: CATTAAGGAGGCATTTACTCACAAAGGAGAGAGAGT...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTTCCCATTTAGAAAACTaGCCAGCACCCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTSHLEN*PAPSKL
Trigger: CAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGA...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCTAATGGAATGCATTTaGATGTATGTGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGLMECI*MYVWLE
Trigger: CTCCAGCCACACATACATTCAAATGCATTCCATTAG...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCCCACGCCTTAGTAACTaGGACGCGACGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFPRLSN*DATADS
Trigger: ACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGG...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCCACGCCTTAGTAACTaGGACGCGACGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCPRLSN*DATADS
Trigger: ACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGG...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACTCCACTGCGGTGCCTaGCGCTATCTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLLHCGA*RYLPHA
Trigger: GGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ESLAVGSWQNSSMNSRKWILGLD*SMNWGS
Trigger: AGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGAT...CCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAATGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KAGLGRGGQETDSRESAEWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSMCSGR*PMLDVL
Trigger: CAAGACATCCAACATGGGGCATCTCCCAGAGCACAT...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGTCTTCAATGTATGTTTaGCTGCTTGAAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVSSMYV*LLEARP
Trigger: GGGCCTTGCTTCAAGCAGGCAAACATACATTGAAGA...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCATTTGTGAATTTGATTaGACCACCGCTTTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: WSTLRCGPGHRALGESWGICEFD*TTAFPL
Trigger: TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAAT...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCGGGACCCCTCGTGTATaGGCCACCAGAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFGTPRV*ATRGLL
Trigger: TAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCCGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFRQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCACTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSLHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCACCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LEEWHRSGCFSICCRACAPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: KAGLGRGGQETDSRESAEGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAAGCCGTGGTACTTGCTaGGAAGGAAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQSRGTC*EGRQLG
Trigger: TCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCT...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EEWHRSGCFSICCRACAFSLLWG*NRDSLG
Trigger: GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACT...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCT +
Preference number: 4 (lower is better)
Translates to: ESLAVGSWQNSSMNSRKWGSSLL*GWNRDS
Trigger: AGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCC...CCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTACTCTTTATTGCCGCTaGGCCAGGCACCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LPQPDLSSELAATWDSFPTLYCR*ARHQVM
Trigger: CATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGT...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTCTGTCAGCAAGGACATaGCATGGAATCAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSALSART*HGIKWA
Trigger: AGCCCACTTGATTCCATGCCATGTCCTTGCTGACAG...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCGTACCTGGATCCTTGTaGACTGCCACTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFVPGSL*TATAGC
Trigger: GCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTAC...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCAAGAGAAAGCAGGTCTaGGGCGGGGTGGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCKRKQV*GGVVRR
Trigger: TCTCCTGACCACCCCGCCCCAGACCTGCTTTCTCTT...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGACTAACCAGTGTCCTTaGCCTGCCTCCGGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMTNQCP*PASGVA
Trigger: AGCGACGCCGGAGGCAGGCCAAGGACACTGGTTAGT...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
3UTR CAA 72 bp GACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCAAGGACATGGCATGGA +
Preference number: 4 (lower is better)
Translates to: DKDRGLGPGHAL*GMFLSARTWHG
Trigger: TCCATGCCATGTCCTTGCTGACAGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp CTAAGGGCCTTTCCTGCACTGACACAAGCCCTTTCTTaGCCTTTAGCCAGCAGGCGTGAACTGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRAFPALTQALS*PLASRRELDLG
Trigger: TCCCAGATCCAGTTCACGCCTGCTGGCTAAAGGCAAAGAAAGGGCTTGTGTCAGTGCAGGAAAGGCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 72 bp CCTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCCTaGGAAAATGGGATGGTGTGGCAGGAGGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: PSQKQEDWVQRP*ENGMVWQEDAK
Trigger: CTTAGCATCCTCCTGCCACACCATCCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGCGCGGCCACGTCCTCTaGCTACCTCGCGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFERGHVL*LPRASK
Trigger: CTTGCTGGCGCGAGGTAGTCAGAGGACGTGGCCGCG...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTLRLPF*TTNQCP
Trigger: AGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAA...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQLRLPF*TTNQCP
Trigger: AGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAA...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCCCAGGAAGGTCCACCTaGTTTTCCCGCCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELPGRST*FSRRDS
Trigger: AGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGG...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTCTTGGAGTCCTCATCTaGTGGGCGCTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCLGVLI*WALWAE
Trigger: CTCAGCCCAGAGCGCCCATCAGATGAGGACTCCAAG...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAAGCAAGGCCCAAGTTaGGAATACAGTAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTKQGPS*EYSKGN
Trigger: GTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTT...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCAGGTTCTCAGTGGGCATCTCTTAACTGTCATCTTGTaGGAGGCAACCTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: HEGPARRGMAFQVLSGHLLTVIL*EATSNS
Trigger: AGAGTTTGAGGTTGCCTCTCACAAGATGACAGTTAA...GAGATGCCCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTTGTACCTATAGCCCCTaGATACATGCTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTCTYSP*IHAQVE
Trigger: CTCTACCTGAGCATGTATTCAGGGGCTATAGGTACA...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAACCAAACGAACTTGTaGTCCAGTGCCCTATTTTAT +
Preference number: 4 (lower is better)
Translates to: SCLGQGGEILTRGCHLVANQTNL*SSALFY
Trigger: ATAAAATAGGGCACTGGATCACAAGTTCGTTTGGTT...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAACTGCCCCTATGCATTaGCTCTATCTTAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLFTMHSGVGADGRQWHETAPMH*LYLKPW
Trigger: CCAGGGCTTAAGATAGAGTCAATGCATAGGGGCAGT...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCCACAGTCAGGCTGTTaGAGGAAAGGTCCAAGAACT +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGPQSGC*RKGPRT
Trigger: AGTTCTTGGACCTTTCCTTCAACAGCCTGACTGTGG...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCTTTTGCGATCTCCTaGGCCCAGCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALSFAIS*AQPGWQ
Trigger: TTGCCAGCCTGGCTGGGCTCAGGAGATCGCAAAAGA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTILGLD*SMNWGS
Trigger: AGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGAT...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSPNLISHQSWQQLGIPFHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...GAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTTTGGTGCTGTATGTaGTCTGGGAGATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: EEWHRSGCFSICCRACAFFWCCM*SGRCPM
Trigger: CATGGGGCATCTCCCAGAGCACATACAGCACCAAAA...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTACATGATTGTTAGCTaGTGTAGCTTTCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CLGQGGEILTRGCHLVASYMIVS*CSFLKK
Trigger: CTTCTTCAGAAAGCTACAGCAGCTAACAATCATGTA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCCAGCACCCAGCAAGCTaGATTCTACATTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIQHPAS*ILHFRD
Trigger: GTCTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTG...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAGGCTGGCAAAGCAACTaGGGTTGGAGAGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQGWQSN*GWRVCC
Trigger: ACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCC...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTAATTGGGGCTCTTTATaGGGACTTCCCCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAANWGSL*GLPLPP
Trigger: TGGAGGCAGGGGAAGTCCCCATAAAGAGCCCCAATT...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTGACTGCAGCATGAATTaGGGCTCTTTATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: KEGSWEFPPSPFHLSGCRDCSMN*GSLWGL
Trigger: AAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTC...ACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGTGGAGTTGGAGCAGATaGGAGGCAGTGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMWSWSR*EAVARR
Trigger: CCTTCGTGCCACTGCCTCCCATCTGCTCCAACTCCA...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLSLLWG*NRDSLG
Trigger: GCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACT...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFSRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGCTCTCACTCAGCGCTaGGCAGGCCATGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYALTQR*AGHGER
Trigger: CCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATGGGGCACAGGCCGGGTaGTGCACACAGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHGAQAG*CTQPPC
Trigger: GCATGGGGGCTGTGTGCACCACCCGGCCTGTGCCCC...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGCTGTTGCATCTGAACTaGAAAACCATTTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKLLHLN*KTIFRG
Trigger: CCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAG...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGTATGGGCTCTCAGACAAAAACATaGGTTAAGCTTAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QSLLEEALQQWRDPSCMGSQTKT*VKLRLC
Trigger: ACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGA...GCCCATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTAAAAAGTGCCAAGACTaGATGTGCAGATTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPKKCQD*MCRLFY
Trigger: ATAGAACAATCTGCACATCCAGTCTTGGCACTTTTT...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTACTAACCAGTGTCCTTaGCCTGCCTCCGGCGTCGCT +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCTNQCP*PASGVA
Trigger: AGCGACGCCGGAGGCAGGCCAAGGACACTGGTTAGT...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTATGGCCTTTCCAGCTTaGGAAGTCACTGACTTCCTA +
Preference number: 4 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVMAFPA*EVTDFL
Trigger: TAGGAAGTCAGTGACTTCCCAAGCTGGAAAGGCCAT...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
3UTR CAA 72 bp CTTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGGVAQEWVLQH*LQGLCILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGPWASS*GYLSEP
Trigger: TGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGG...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAACTCTTTCTTCCCCTTaGACTCAAAAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSTLSSP*TQKKSP
Trigger: AGGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGT...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAGAATGAAAATGCTTaGAGTCATTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQQNENA*SHFPWH
Trigger: ATGCCAAGGAAAATGACTTCAAGCATTTTCATTCTG...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR TCA 90 bp GAGAGGCACCAAGCTCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGCCACAGTCAGGCTGTTaGAGGAAAGGTCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: ERHQAHPGSHLARSKRIGPQSGC*RKGPRI
Trigger: AATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGG...CCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGCTTGGACTGCAGCATaGATTGGGGCTCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCAWTAA*IGALYG
Trigger: CCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACTCAGTGGGCATCTCTaGCTCCACAGAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQLSGHL*LHRSAF
Trigger: AAAAGCACTTCTGTGGAGTCAGAGATGCCCACTGAG...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATGGTATTACCAACGCTaGGCCTCCAGCAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAWYYQR*ASSRAL
Trigger: AAGTGCTCTGCTGGAGGCTCAGCGTTGGTAATACCA...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSCFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGGTCCAGTTTACAGTTTaGTCCAATTTACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQVQFTV*SNLLSC
Trigger: ACATGACAGTAAATTGGAGCAAACTGTAAACTGGAC...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp ACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGTCCAGTTTACAGTTTaGTCCAATTTACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: THSLLPLGQAPGHAWAKEVQFTV*SNLLSC
Trigger: ACATGACAGTAAATTGGAGCAAACTGTAAACTGGAC...CTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTCCATGTTGGATGTCTTaGTTTGGCATTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSAPCWMS*FGIQNG
Trigger: GCCATTCTGAATGCCAAAGCAAGACATCCAACATGG...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCACTTGGACCAGGGCATaGCCTGTTGGGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFTWTRA*PVGDVS
Trigger: AGAAACATCCCCAACAGGGCATGCCCTGGTCCAAGT...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCCGTTCTGTCCACTGGTaGAGGACAGCACCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELRSVHW*RTAPVS
Trigger: AGAAACGGGTGCTGTCCTGCACCAGTGGACAGAACG...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTGACAGCATCCTCTTTTaGGATCTGTCCGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTDSILF*DLSGQH
Trigger: ATGTTGACCGGACAGATCGCAAAAGAGGATGCTGTC...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCT +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALQCLQR*EPQDVP
Trigger: AGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTG...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACGTCCTCAAGCATCCTTaGCTTGGACTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDVLKHP*LGLQHE
Trigger: TTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGAC...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLADGRQ*HEGPAR
Trigger: TCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGC...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAGCAGATGGGAGGCAGTaGCACGAAGGTCCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKADGRQ*HEGPAR
Trigger: TCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGC...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCATCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSLSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTLSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCACTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LEEWHRSGCFSICCRACALSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VGISDSTEVLLVVGRSSARLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGCTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: CESLAVGSWQNSSMNSRKLLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...CTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGACTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TCCCTGCCTCACGCTGGCTCTCCTTTTGTCCATCTACATGTAGAGACTGATGTAGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SLPHAGSPFVHLHVETDVEECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...TACATCAGTCTCTACATGTAGATGGACAAAAGGAGAGCCAGCGTGAGGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVMSSRS*ALVFFG
Trigger: CCCAAAGAAGACTAGAGCCCAACTTCTGGATGACAT...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALSRYCL*FTSRRS
Trigger: AGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTAATGCTGCTGTGGCCTaGGTTCCAAGAAAGAATGCA +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTNAAVA*VPRKNA
Trigger: TGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATT...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAIGEGT*ILVDCH
Trigger: GTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAAT...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPNLISHQSWQQLGIPFIGEGT*ILVDCH
Trigger: GTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAAT...GAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGCATCAACCCATAGAGTaGTCTTTTGAACTGGTATCT +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVHQPIE*SFELVS
Trigger: AGATACCAGTTCAAAAGACCACTCTATGGGTTGATG...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCATAGAATGTTACAGCTaGAATGGGCATGGAAATCAT +
Preference number: 4 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGIECYS*NGHGNH
Trigger: ATGATTTCCATGCCCATTCCAGCTGTAACATTCTAT...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAGCACCAAGCTCATCCTaGTTCTCACCTAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAAPSSS*FSPSQK
Trigger: CTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGC...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACGCCGTTCTGTCCACTaGTGCAGGACAGCACCCGTT +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKRRSVH*CRTAPV
Trigger: AACGGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCACTCTTTCTTCCCCTTaGACTCAAAAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGTLSSP*TQKKSP
Trigger: AGGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGT...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAIQLLI*VLKHPW
Trigger: CCAAGGATGCTTGAGGACTCAGATGAGCAACTGGAT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TTCTCACCTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCCTTGGAAAATGGGATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSPSQKQEDWVQRPLENGIQLLI*VLKHPW
Trigger: CCAAGGATGCTTGAGGACTCAGATGAGCAACTGGAT...CCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATGTCGTCATGCGCGGGTaGTGGAGCACCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHVVMRG*WSTRGC
Trigger: GCAGCCTCTGGTGCTCCATCACCCGCGCATGACGAC...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQNHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGTATCCCTGTTGCATCTaGACTGGAAAACCATTTTTA +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVYPCCI*TGKPFL
Trigger: TAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATA...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GTCACTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCCAGAATGAAAATGCTTaGAGTCATTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VTGCGLLAELIHELEEVAQNENA*SHFPWP
Trigger: AGGCCAAGGAAAATGACTTCAAGCATTTTCATTCTG...GGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACCAGTGTCCTTGGCTTaGTCTTTGACTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQPVSLA*SLTLGM
Trigger: CATTCCCAAAGTCAAAGATCAAGCCAAGGACACTGG...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACCACGCCTTAGTAACTaGGACGCGACGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKPRLSN*DATADS
Trigger: ACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACTCCACTGCGGTGCCTaGCGCTATCTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERLHCGA*RYLPHA
Trigger: GGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVSLRGV*GGDVPV
Trigger: GACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCT...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCTTCCTCACACAGTGGTaGTTCAGCAGAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCFLTQW*FSRKAW
Trigger: CCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAA...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFILGLD*SMNWGS
Trigger: AGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGAT...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAATGTGTGGATTTTTGGTaGTGTATGTGCTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KAGLGRGGQETDSRESAECVDFW*CMCSGR
Trigger: TCTCCCAGAGCACATACAGCACCAAAAATCCACACA...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCACTTGTGGACTGCCACTaGTGGCTGCCTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPLVDCH*WLPPLQ
Trigger: TTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAG...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGTACATGATTGTTAGCTaGTGTAGCTTTCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVYMIVS*CSFLKK
Trigger: CTTCTTCAGAAAGCTACAGCAGCTAACAATCATGTA...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTTCACTGACTTCCTACTaGCCCTATGCATTGACTCTA +
Preference number: 4 (lower is better)
Translates to: AELIHELEEVAELGLALTSLTSY*PYALTL
Trigger: TAGAGTCAATGCATAGGGGCAGTAGGAAGTCAGTGA...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTTTCAGCAGAAAAGCCTaGTCCAGGATATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAFSRKA*SRICPG
Trigger: TCCTGGACATATCCTGGACCAGGCTTTTCTGCTGAA...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCT +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCQCLQR*EPQDVP
Trigger: AGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTG...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTATGCACAGTGGAGTTaGAGCAGATGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALYAQWS*SRWEAV
Trigger: CACTGCCTCCCATCTGCTCCAACTCCACTGTGCATA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCATGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCT +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFGSSLL*GWNRDS
Trigger: AGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCC...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCGCCGTTCTGTCCACTaGTGCAGGACAGCACCTAGT +
Preference number: 4 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVRRSVH*CRTAPS
Trigger: ACTAGGTGCTGTCCTGCACCAGTGGACAGAACGGCG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000340360.10
CDS-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGTGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVYNYVF*HKLCPV
Trigger: AACTGGACATAACTTATGCCAAAAGACGTAGTTGTA...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCGTGATAACAGCACTTTaGGAGGCAGGAGGATCATTT +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGVITAL*EAGGSF
Trigger: AAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCAC...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
3UTR CAA 72 bp GTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTaGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLWEMPHVGCLA*AFRMAVEIRSR
Trigger: CCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: LPQPDLSSELAATWDSFPAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: VGISDSTEVLLVVGRSSAAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAATGGGCGCTCTGGGCTaGGGCGGACAGTTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAMGALG*GGQLCH
Trigger: GTGACACAACTGTCCGCCTCAGCCCAGAGCGCCCAT...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVANHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTAAGCTGTGCCACCAATaGGAGCATTGGGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GVGASAFVAGLVHSSGFPKLCHQ*EHWVQV
Trigger: AACTTGAACCCAATGCTCTCATTGGTGGCACAGCTT...AGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTGGCACCCAGTCTATTaGCCTGTGCACCCACTCTTT +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCWHPVY*PVHPLF
Trigger: AAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCA...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAACTGCCACTGCTGGCTaGCTCCTCTCCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLTATAG*LLSNSS
Trigger: TGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGT...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCATTGGGTTCAAGTTTaGATCAAACATGGTATTACC +
Preference number: 4 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWHWVQV*IKHGIT
Trigger: GGTAATACCATGTTTGATGCAAACTTGAACCCAATG...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGGTTAAACTTCTTCTCTaGCCCCCGCCCCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMVKLLL*PPPPLF
Trigger: AAAAAGTGGGGGCGGGGGGCAGAGAAGAAGTTTAAC...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTTCCCCAAATCACAGATaGCCTCCACAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLSPNHR*PPQSGC
Trigger: ACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGA...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCACAAAGCAACTGGGGTTaGAGAGTCTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAQSNWG*RVCCHP
Trigger: TGGATGACAACAGACTCTCCAACCCCAGTTGCTTTG...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCCAAAGCAACTGGGGTTaGAGAGTCTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFQSNWG*RVCCHP
Trigger: TGGATGACAACAGACTCTCCAACCCCAGTTGCTTTG...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGACTGCAGCATGAATTaGGGCTCTTTATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCDCSMN*GSLWGL
Trigger: AAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCTCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCAAGAAAGAATGCATGTaGCACCCAGTCTATTGCCCT +
Preference number: 4 (lower is better)
Translates to: VGISDSTEVLLVVGRSSAKKECM*HPVYCP
Trigger: AGGGCAATAGACTGGGTGCCACATGCATTCTTTCTT...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTCACCTAGCCAGAAGCAAGAGGATTGGGTCCAGAGACCCTTGGAAAATGGGGGAGATGCCCCATGTTaGATGTCTTGCTTTGGCATT +
Preference number: 4 (lower is better)
Translates to: FSPSQKQEDWVQRPLENGGDAPC*MSCFGI
Trigger: AATGCCAAAGCAAGACATCCAACATGGGGCATCTCC...CCCATTTTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGGCTAGGTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAATCTCTCATCAGAGCTaGCAGCAACTTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAISHQS*QQLGIP
Trigger: AGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGAT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
3UTR CAA 72 bp GCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCCCTTTGGCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: AQEWVLQHLLQG*CILLDSLWLNE
Trigger: TTCATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR TCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGAGGCAGCAGGTTTTCTaGGGCATTGATATAAATCAC +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLRQQVF*GIDINH
Trigger: GTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GTGGGCATCTCTGACTCCACAGAAGTGCTTTTGGTAGTGGGCAGATCTTCAGCCAGGCAGCAGGTTTTCTaGGGCATTGATATAAATCAC +
Preference number: 4 (lower is better)
Translates to: VGISDSTEVLLVVGRSSARQQVF*GIDINH
Trigger: GTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT...GGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAACTTCTTCAGTCTCCTaGGCCCAGCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLTSSVS*AQPGWQ
Trigger: TTGCCAGCCTGGCTGGGCTCAGGAGACTGAAGAAGT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAAAATCCAGGGTAAGATaGAAACACAACCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVAKSRVR*KHNLCP
Trigger: CGGACAGAGGTTGTGTTTTCATCTTACCCTGGATTT...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000340360.10
CDS-3UTR TCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMTRGLL*KTNSQR
Trigger: TCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGT...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AAATGGCCTTTCCAGCTTGGGAAGTCACTGACTTCCTACTGCCCCTATGCATTGGATCCCGCAAGCGAATaGAGATGTCATCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: KWPFQLGKSLTSYCPYALDPASE*RCHPEV
Trigger: AACTTCTGGATGACATCTTCATTCGCTTGCGGGATC...CAATGCATAGGGGCAGTAGGAAGTCAGTGACTTCCCAAGCTGGAAAGGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACACAGCTCTAGCCTTGTaGGTCACTGGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYTALAL*VTGCGL
Trigger: GAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGT...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCAGAATGAAAATGCTTaGAGTCATTTTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IETQLPVTCLELLQQPLGQNENA*SHFPWP
Trigger: AGGCCAAGGAAAATGACTTCAAGCATTTTCATTCTG...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACTTCACTTGTTTCTTTaGCTGCCTCCGGCGTCGCTT +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKLHLFL*LPPASL
Trigger: AAGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGATGCCTCCTGTTCTaGGACGGCCAAATTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLRCLLF*DGQIGR
Trigger: CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGATGCCTCCTGTTCTaGGACGGCCAAATTGGGCGG +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFERCLLF*DGQIGR
Trigger: CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCT...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCATCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: GSVTMLLWPGFQERMHVASGCTS*LSAMLQ
Trigger: CTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLILGLD*SMNWGS
Trigger: AGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGAT...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTTGGCCTCCAGGTACTaGTTGTGGTTCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFELASRY*LWFTSR
Trigger: GCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAGGTTCCAAGAAAGAATaGATGTGGCACCCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAGSKKE*MWHPVY
Trigger: ATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAAGGTGAAAATGTTGTTTaGCAGCAACACAAGTGCGTT +
Preference number: 4 (lower is better)
Translates to: PGQHIETQLPVTCLELLQGENVV*QQHKCV
Trigger: AACGCACTTGTGTTGCTGGCAAACAACATTTTCACC...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAATCCCCAAATCACAGATaGCCTCCACAGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKSPNHR*PPQSGC
Trigger: ACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGA...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACAGGACACGGAGGTGTaGCAGAATCCCCAAATCACA +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKQDTEV*QNPQIT
Trigger: TGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCCAAAGCAACTGGGGTTaGAGAGTCTGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELQSNWG*RVCCHP
Trigger: TGGATGACAACAGACTCTCCAACCCCAGTTGCTTTG...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTCAACATCCTTTTTCATaGGCAGTACAGTATAATCCA +
Preference number: 4 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVQHPFS*AVQYNP
Trigger: TGGATTATACTGTACTGCCCATGAAAAAGGATGTTG...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCCTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELLSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCATGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGTGTCCAGCTTGGGCTTaGAGGAGTGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLCPAWA*RSGTGV
Trigger: CACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACA...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAATGTCATCCAGAAGTTaGGCTCTAGTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAMSSRS*ALVFFG
Trigger: CCCAAAGAAGACTAGAGCCCAACTTCTGGATGACAT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTATGGCCGAACTTGGGCTaGCTCTCACTCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLWPNLG*LSLSAG
Trigger: CCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCA...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGTGACAATGCTGCTGTaGCCTGGGTTCCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLVTMLL*PGFQER
Trigger: TCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCAC...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCAAAGACAGAGGACTTaGACCAGGGCATGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVQRQRT*TRACPV
Trigger: AACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTAGTGGTCTTTTGAACTaGTATCTAAACATACCTGGT +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTSGLLN*YLNIPG
Trigger: ACCAGGTATGTTTAGATACCAGTTCAAAAGACCACT...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCACTCTATCTTAAGCCCTaGTTCAGGACCTTAACATGC +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALALYLKP*FRTLTC
Trigger: GCATGTTAAGGTCCTGAACCAGGGCTTAAGATAGAG...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPNGAQI*WLPHTV
Trigger: CACTGTGTGAGGAAGCCATCAGATCTGTGCACCATT...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: WLTPVITALWEAGGSFELAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCAACGAATATACAGGATaGCACTGTCCCTGCACATTA +
Preference number: 4 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFNEYTG*HCPCTL
Trigger: TAATGTGCAGGGACAGTGTCATCCTGTATATTCGTT...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALSGCTS*LSAMLQ
Trigger: CTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTGGAGCACCAGAGGCTaGTTCGGCACCTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEWSTRG*FGTFGI
Trigger: AATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMCFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTAGCACCCACTCTTTATTaGCGCTGGGCCAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLAPTLY*RWARHQ
Trigger: CTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGC...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp AAATGGCCTTTCCAGCTTGGGAAGTCACTGACTTCCTACTGCCCCTATGCATTGGGTTCCAAGAAAGAATaGATGTGGCACCCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: KWPFQLGKSLTSYCPYALGSKKE*MWHPVY
Trigger: ATAGACTGGGTGCCACATGCATTCTTTCTTGGAACC...CAATGCATAGGGGCAGTAGGAAGTCAGTGACTTCCCAAGCTGGAAAGGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGCCATGTTGGATGTCTTaGTTTGGCATTCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMPCWMS*FGIQNG
Trigger: GCCATTCTGAATGCCAAAGCAAGACATCCAACATGG...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAATGTGCTCTGGGAGATaGCCCATGTTGGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLMCSGR*PMLDVL
Trigger: CAAGACATCCAACATGGGGCATCTCCCAGAGCACAT...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTACATGATTGTTAGCTaGTGTAGCTTTCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EEWHRSGCFSICCRACAFYMIVS*CSFLKK
Trigger: CTTCTTCAGAAAGCTACAGCAGCTAACAATCATGTA...GAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTAAGGTATCTCAGCTCTaGGAAGGGTGGGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFKVSQL*EGWGQR
Trigger: ACGCTGGCCCCACCCTTCCCAGAGCTGAGATACCTT...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGGGACCCCTCGTGTATaGGCCACCAGAGGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAGTPRV*ATRGLL
Trigger: TAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCACGGCAAGACGGGGAATaGCCTTCCAGGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRARQDGE*PSRFSV
Trigger: CACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCG...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKLHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGATGAACTCGAGGAAGTaGCCGAACTTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLMNSRK*PNLGWL
Trigger: GAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCAT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTTACAACTACGTCTTTTaGCATAAGTTATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTYNYVF*HKLCPV
Trigger: AACTGGACATAACTTATGCCAAAAGACGTAGTTGTA...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGTACCTGGATCCTTGTaGACTGCCACTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERVPGSL*TATAGC
Trigger: GCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTAC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAAAAAAGTGCCAAGACTaGATGTGCAGATTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: KAGLGRGGQETDSRESAEKKCQD*MCRLFY
Trigger: ATAGAACAATCTGCACATCCAGTCTTGGCACTTTTT...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGAGAGATCAGTCAAATTaGAAAAAGTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLRDQSN*KKCQDW
Trigger: CCAGTCTTGGCACTTTTTCCAATTTGACTGATCTCT...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTAAGAGAAAGCAGGTCTaGGGCGGGGTGGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFKRKQV*GGVVRR
Trigger: TCTCCTGACCACCCCGCCCCAGACCTGCTTTCTCTT...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLPWASS*GYLSEP
Trigger: TGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTAAATCCAGGGTAAGATaGAAACACAACCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLKSRVR*KHNLCP
Trigger: CGGACAGAGGTTGTGTTTTCATCTTACCCTGGATTT...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000340360.10
CDS-3UTR TCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCACGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALARDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAAAGGAGGGGAGATCCTaGCAAGGGGATGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQKEGRS*QGDATL
Trigger: CAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTT...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGTATCCCTGTTGCATCTaGACTGGAAAACCATTTTTA +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLYPCCI*TGKPFL
Trigger: TAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATA...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GATTCTCTGGGCCCGTTTCTCTTTGTGAACATAGGGTTTCTGAAGAGTGTCCAGTCTACATGTAGAGACTaGTGTAGGCAGTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DSLGPFLFVNIGFLKSVQSTCRD*CRQLLS
Trigger: AGAGAGCAACTGCCTACATCAGTCTCTACATGTAGA...CTGGACACTCTTCAGAAACCCTATGTTCACAAAGAGAAACGGGCCCAGAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCACCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAPTFSL*SNQTLG
Trigger: CCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGG...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAACTTGGTTGTCGTCATaGGCGGGTGATGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERTWLSS*AGDGAP
Trigger: TGGTGCTCCATCACCCGCGCATGACGACAACCAAGT...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGCATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTTTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCACAGCTGCCGGTAACGTaGCTGGAACTCCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAQLPVT*LELLQQ
Trigger: CTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTG...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTGGTCAACCTTGAGGTaGGGTCCAGGGCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: TVKETHESGCSVYSQSLVWSTLR*GPGHRA
Trigger: GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAGCAGTGGCTCAGCATTaGGGTGAAAATGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKAVAQH*GENVVC
Trigger: GCAAACAACATTTTCACCGCAATGCTGAGCCACTGC...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGGGCTTCCTCACACAGTaGTGCTTCAGCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEGFLTQ*CFSRKA
Trigger: GGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCC...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACA +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYQDTEV*QNPQIT
Trigger: TGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTG...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CTAAGGGCCTTTCCTGCACTGACACAAGCCCTTTCTTTGCCTTTAGCCAGCAGGCAACATCCTTTTTCATaGGCAGTACAGTATAATCCA +
Preference number: 4 (lower is better)
Translates to: LRAFPALTQALSLPLASRQHPFS*AVQYNP
Trigger: TGGATTATACTGTACTGCCCATGAAAAAGGATGTTG...CCTGCTGGCTAAAGGCAAAGAAAGGGCTTGTGTCAGTGCAGGAAAGGCCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGAAGGATCTCGAATATaGGAGGAAGTGAACATATCT +
Preference number: 4 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCEGSRI*EEVNIS
Trigger: AGATATGTTCACTTCCTCCCATATTCGAGATCCTTC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGGGCAGTTCACTCACCTaGGTCAGGAAGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEGSSLT*VRKMDS
Trigger: AGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCC...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACTCTCTGGGTGCCGTTaGTGGTTTCTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLLSGCR*WFLLVF
Trigger: AAAGACCAAAAGAAACCACCAACGGCACCCAGAGAG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTGGCTCAATGAAGGCTaGATCAGGCTTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEWLNEG*IRLGCQ
Trigger: CTGACAGCCAAGCCTGATCCAGCCTTCATTGAGCCA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGCTTGTGCATTCTTCTaGATTCCCTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCACAFF*IPFGSM
Trigger: CATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGGAGTGGCACAGGAGTaGGTGCTTCAGCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYGVAQE*VLQHLL
Trigger: CAACAAATGCTGAAGCACCCACTCCTGTGCCACTCC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGAAGAGTGTCCAGCTTaGGCTTGGAGGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKEREECPA*AWRSGT
Trigger: TGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTACCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLPSTAS*PPGTAC
Trigger: ACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGG...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGCACCAGGTCATGCCTaGGCCAAGGAGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFAPGHA*AKEGRS
Trigger: GGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGGGATGGGGTTTCCATaGTGTACAACTACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLGMGFP*CTTTSF
Trigger: AAAAGACGTAGTTGTACACCATGGAAACCCCATCCC...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGTGCTGTATGTGCTCTaGGAGATGCCCCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYVLYVL*EMPHVG
Trigger: TCCAACATGGGGCATCTCCCAGAGCACATACAGCAC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACTGTGTGTGGATTTTTaGTGCTGTATGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLLCVDF*CCMCSG
Trigger: CCCAGAGCACATACAGCACCAAAAATCCACACACAG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTACAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLQGMPC*GCFCQQ
Trigger: TTGCTGACAGAAACATCCCCAACAGGGCATGCCCTG...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTACAAAGACAGAGGACTTaGACCAGGGCATGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLQRQRT*TRACPV
Trigger: AACAGGGCATGCCCTGGTCCAAGTCCTCTGTCTTTG...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGAGTGGTCTTTTGAACTaGTATCTAAACATACCTGGT +
Preference number: 4 (lower is better)
Translates to: NACGTQSIALCTHSLLPLSGLLN*YLNIPG
Trigger: ACCAGGTATGTTTAGATACCAGTTCAAAAGACCACT...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCACATCAACCCATAGAGTaGTCTTTTGAACTGGTATCT +
Preference number: 4 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAHQPIE*SFELVS
Trigger: AGATACCAGTTCAAAAGACCACTCTATGGGTTGATG...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAACTCTTTCTTCCCCTTaGACTCAAAAGAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPTLSSP*TQKKSP
Trigger: AGGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGT...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLNGAQI*WLPHTV
Trigger: CACTGTGTGAGGAAGCCATCAGATCTGTGCACCATT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAAGGGCTGGAAACGTGTaGAATGCCTCTAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQRAGNV*NASRGS
Trigger: GCTGCCTCTAGAGGCATTTCACACGTTTCCAGCCCT...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTAAGGGCTGGAAACGTGTaGAATGCCTCTAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLRAGNV*NASRGS
Trigger: GCTGCCTCTAGAGGCATTTCACACGTTTCCAGCCCT...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCACTTCTTCAGTCTCCTaGGCCCAGCCAGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCITSSVS*AQPGWQ
Trigger: TTGCCAGCCTGGCTGGGCTCAGGAGACTGAAGAAGT...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGCTTGGACTGCAGCATaGATTGGGGCTCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERAWTAA*IGALYG
Trigger: CCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGCGAGACATCAAAACATaGTGCTTAGGCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: QWLSIAVKMLFASNTSALRDIKT*CLGFTI
Trigger: GATAGTAAAGCCTAAGCATCATGTTTTGATGTCTCG...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATAGACACACGCACCAATaGTGGGGATACCCCCAAATG +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHRHTHQ*WGYPQM
Trigger: CATTTGGGGGTATCCCCATCATTGGTGCGTGTGTCT...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACTTAAGCCCCAAGAAGTaGGGTGGGTTGTGGATCACT +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYLSPKK*GGLWIT
Trigger: AGTGATCCACAACCCACCTCACTTCTTGGGGCTTAA...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGGCAGGAGGATCATTTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAGRRII*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAATGATCCTCCTGCC...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGGGCTCAGCATTGCGGTaGAAATGTTGTTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFEGSALR*KCCLPA
Trigger: TGCTGGCAAACAACATTTTCACCGCAATGCTGAGCC...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTTATGGGGACTTCCCCTaGCTCCATTCCAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFYGDFP*LHSSLL
Trigger: CAGTAGACTGGAATGGAGGCAGGGGAAGTCCCCATA...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACATAGCCGTGGTACTTaGTGGGAAGGAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERHSRGT*WEGRQL
Trigger: CAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATTGTTGCAGGGCTTGTaGATTCTTCTGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLLLQGL*ILLDSL
Trigger: AAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAA...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTTGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCATGGCACAGGAGTGGGTaGTTCAGCATTTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAWHRSG*FSICCR
Trigger: CCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCA...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp GGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTGTCCAGTTTACAGTTTaGTCCAATTTACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: GVGASAFVAGLVHSSGFPVQFTV*SNLLSC
Trigger: ACATGACAGTAAATTGGAGCAAACTGTAAACTGGAC...AGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR GCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCATGTGTGGATTTTTGGTaGTGTATGTGCTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPCVDFW*CMCSGR
Trigger: TCTCCCAGAGCACATACAGCACCAAAAATCCACACA...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGACAGCATCCTCTTTTaGGATCTCCTGAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVDSILF*DLLSPA
Trigger: GGCTGGGCTCAGGAGATCGCAAAAGAGGATGCTGTC...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACA +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFQDTEV*QNPQIT
Trigger: TGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTG...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAACAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCT +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQQCLQR*EPQDVP
Trigger: AGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTG...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACCAGCGTCTGGTTCCTaGCCTTCAGTGACTTCACAG +
Preference number: 4 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLPASGS*PSVTSQ
Trigger: CTGTGAAGTCACTGAAGGCCAGGAACCAGACGCTGG...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAGAAGCTCTTCAGCAGTaGAGGGACCCCTCGTGTATG +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQEALQQ*RDPSCM
Trigger: CATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTC...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTCCTTTGAGGGAGACTTaGTTGTCGTCATGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCPLRET*LSSCAG
Trigger: ACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGG...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACTTCCAGGTTCTCAGTaGGCATCTCTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERLPGSQ*ASLTPQ
Trigger: CTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLRLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACATTGGAGAAGGTACCTaGATCCTTGTGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYIGEGT*ILVDCH
Trigger: GTGGCAGTCCACAAGGATCCAGGTACCTTCTCCAAT...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCTGTGGATCACTGACATaGTCAGGGGAGGCCCACACC +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCICGSLT*SGEAHT
Trigger: GGTGTGGGCCTCCCCTGACCATGTCAGTGATCCACA...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFETRGLL*KTNSQR
Trigger: TCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGT...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAAGCTGTGCCACCAATaGGAGCATTGGGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLKLCHQ*EHWVQV
Trigger: AACTTGAACCCAATGCTCTCATTGGTGGCACAGCTT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCATTAACTGTCATCTTGTaGGAGGCAACCTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPLTVIL*EATSNS
Trigger: AGAGTTTGAGGTTGCCTCTCACAAGATGACAGTTAA...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCATTCCTCACACAGTGGTaGTTCAGCAGAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAFLTQW*FSRKAW
Trigger: CCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAA...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR GCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTTTTGGTGCTGTATGTaGTCTGGGAGATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHFWCCM*SGRCPM
Trigger: CATGGGGCATCTCCCAGAGCACATACAGCACCAAAA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCT +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIQCLQR*EPQDVP
Trigger: AGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTG...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTCTTCACTATGCACAGTaGAGTTGGAGCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFLHYAQ*SWSRWE
Trigger: CTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAG...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGTTGTGTCACTCAGGTaGGACAGGGTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRAVVSLR*DRVSSL
Trigger: TAGTGAAGAGACCCTGTCCCACCTGAGTGACACAAC...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp AGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCCCTGGGTCAGGAAGATaGACTCTGTGCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SHRMLQLEWAWKSSKLNFPGSGR*TLCSWS
Trigger: ACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGG...GAAGTTTAACTTGGATGATTTCCATGCCCATTCCAGCTGTAACATTCTATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp AGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCCAGGGCATGCCCTGTTaGGGATGTTTCTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHRMLQLEWAWKSSKLNFQGMPC*GCFCQQ
Trigger: TTGCTGACAGAAACATCCCCAACAGGGCATGCCCTG...GAAGTTTAACTTGGATGATTTCCATGCCCATTCCAGCTGTAACATTCTATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAATGTTACAGCTGGAATaGGCATGGAAATCATCCAAG +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLMLQLE*AWKSSK
Trigger: CTTGGATGATTTCCATGCCCATTCCAGCTGTAACAT...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHPWASS*GYLSEP
Trigger: TGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGG...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVNGAQI*WLPHTV
Trigger: CACTGTGTGAGGAAGCCATCAGATCTGTGCACCATT...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTCCATTCCAGTCTACTaGCTCGTCATAGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHSIPVY*LVIELN
Trigger: GTTCAGCTCTATGACGAGTCAGTAGACTGGAATGGA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGATCCCGCAAGCGAATaGAGATGTCATCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERDPASE*RCHPEV
Trigger: AACTTCTGGATGACATCTTCATTCGCTTGCGGGATC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTATCCTGACAAGGGGATaGCACCTTGTGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFILTRG*HLVASK
Trigger: CTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGAT...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTATGTGTGGATTTTTGGTaGTGTATGTGCTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLCVDFW*CMCSGR
Trigger: TCTCCCAGAGCACATACAGCACCAAAAATCCACACA...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCTCAAATTGGAAAAAGTaGCAAGACTGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVSNWKK*QDWMCR
Trigger: TCTGCACATCCAGTCTTGGCACTTTTTCCAATTTGA...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCGTCCTCAAGCATCCTTaGCTTGGACTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: SHRMLQLEWAWKSSKLNFVLKHP*LGLQHE
Trigger: TTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGAC...GAAGTTTAACTTGGATGATTTCCATGCCCATTCCAGCTGTAACATTCTATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAAGGCTGGATCAGGCTTaGCTGTCAGCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQRLDQA*LSAVLH
Trigger: ATGAAGAACTGCTGACAGCCAAGCCTGATCCAGCCT...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCACTTCTGGATTCCCTTTaGCTCAATGAAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VKMLFASNTSALSKTLRALLDSL*LNEGWI
Trigger: GATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAG...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTGTGACAATGCTGCTGTaGCCTGGGTTCCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCVTMLL*PGFQER
Trigger: TCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCAC...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAAGAGATCAGTCAAATTaGAAAAAGTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLRDQSN*KKCQDW
Trigger: CCAGTCTTGGCACTTTTTCCAATTTGACTGATCTCT...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGGCAGCAGGTTTTCTaGGGCATTGATATAAATCAC +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFERQQVF*GIDINH
Trigger: GTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR TCA 90 bp AGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SHRMLQLEWAWKSSKLNFTRGLL*KTNSQR
Trigger: TCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGT...GAAGTTTAACTTGGATGATTTCCATGCCCATTCCAGCTGTAACATTCTATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAACGAATATACAGGATaGCACTGTCCCTGCACATTA +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLNEYTG*HCPCTL
Trigger: TAATGTGCAGGGACAGTGTCATCCTGTATATTCGTT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHSGCTS*LSAMLQ
Trigger: CTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTGCCAGCAACACAAGTaGGTTGTCAAAAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: CGENVVCQQHKCVVKNFECQQHK*VVKNFE
Trigger: CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTTTCCTTCGAATTAAGTaGATTCCCAGTCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVFLRIK*IPSRSW
Trigger: CCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAA...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTTGGACTCTGTGCTCTTaGAGTCCTCATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFWTLCS*SPHLMG
Trigger: GCCCATCAGATGAGGACTCCAAGAGCACAGAGTCCA...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAATCTGGGTGCCGTTGGTaGTTTCTTTTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQSGCRW*FLLVFL
Trigger: GAGAAAGACCAAAAGAAACCACCAACGGCACCCAGA...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGTAGCTGTTGGCCCTaGTTCCAGATTAATATAGCA +
Preference number: 4 (lower is better)
Translates to: TNESIGFKFASNMVLPTLSSCWP*FQINIA
Trigger: TGCTATATTAATCTGGAACCAGGGCCAACAGCTACT...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTCATTTTCCTTGGCCTTaGAGAACTTCAGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVHFPWP*RTSGHS
Trigger: TGAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATG...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGAAAATGGGATGGTGTaGCAGGAGGATGCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFENGMV*QEDAKG
Trigger: CCCCTTAGCATCCTCCTGCCACACCATCCCATTTTC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCAATCATCCTTATGGATaGCGGAGGAAGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCINHPYG*RRKAVH
Trigger: GTGAACTGCCTTCCTCCGTCATCCATAAGGATGATT...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTTGCTTCAGCATTTGTTaGAGGGCTTGTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KFLANGLLAVAQHCGENVCFSIC*RACAFF
Trigger: GAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCA...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGGAGATGCCCCATGTTaGATGTCTTGCTTTGGCATT +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIGDAPC*MSCFGI
Trigger: AATGCCAAAGCAAGACATCCAACATGGGGCATCTCC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCAGAAGCAAGAGGATTaGGTCCAGAGACCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFQKQED*VQRPLE
Trigger: TTCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTG...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR TCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAGAATATGGGAGGAAGTaGACATATCTTGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQEYGRK*TYLGCL
Trigger: GAGACAACCAAGATATGTTCACTTCCTCCCATATTC...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGCTTTTCACCTTCCATaGTTCCTTCCGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIAFHLP*FLPRHQ
Trigger: TTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAATTAACTGTCATCTTGTaGGAGGCAACCTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQLTVIL*EATSNS
Trigger: AGAGTTTGAGGTTGCCTCTCACAAGATGACAGTTAA...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR TCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAGTTATGGAAGGAGAATaGATTTTCTCCTCTAGTGAT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLVMEGE*IFSSSD
Trigger: ATCACTAGAGGAGAAAATTCATTCTCCTTCCATAAC...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR GCA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCATTGGGTTCAAGTTTaGATCAAACATGGTATTACC +
Preference number: 4 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYHWVQV*IKHGIT
Trigger: GGTAATACCATGTTTGATGCAAACTTGAACCCAATG...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCAAGCAGATTTCTGGCTaGGAAGCAGTTGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: TVKETHESGCSVYSQSLVKQISG*EAVVQV
Trigger: TACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTT...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAGAAGTGAACATATCTTaGTTGTCTCTGAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLEVNIS*LSLRLK
Trigger: TTTCAACCTCAGAGACAACCAAGATATGTTCACTTC...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACTGTTGCATCTGAACTaGAAAACCATTTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERLLHLN*KTIFRG
Trigger: CCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAAAGCTTAGGCTGTGTGTaGATTTTTGGTGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: THESGCSVYSQSLVSGEQSLGCV*IFGAVC
Trigger: ACATACAGCACCAAAAATCCACACACAGCCTAAGCT...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTAAGTAGCTGTTGGCCCTaGTTCCAGATTAATATAGCA +
Preference number: 4 (lower is better)
Translates to: FRDPIGICEFDCTTAFPLSSCWP*FQINIA
Trigger: TGCTATATTAATCTGGAACCAGGGCCAACAGCTACT...TAAAGGAAAAGCGGTGGTGCAATCAAATTCACAAATACCAATGGGGTCTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CCA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAAAAAGTGCCAAGACTaGATGTGCAGATTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLKKCQD*MCRLFY
Trigger: ATAGAACAATCTGCACATCCAGTCTTGGCACTTTTT...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGACATCAACCCATAGAGTaGTCTTTTGAACTGGTATCT +
Preference number: 4 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERHQPIE*SFELVS
Trigger: AGATACCAGTTCAAAAGACCACTCTATGGGTTGATG...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGAGCTGGCAGCAACTTaGGATTCCTTTCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFELAAT*DSFPFS
Trigger: GGAAAAAGGAAAGGAATCCCAAGTTGCTGCCAGCTC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR TCA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCAAGCAAGGCCCAAGTTaGGAATACAGTAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TVKETHESGCSVYSQSLVKQGPS*EYSKGN
Trigger: GTTTCCTTTACTGTATTCTCAACTTGGGCCTTGCTT...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGGGATGGGGTTTCCATaGTGTACAACTACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFGMGFP*CTTTSF
Trigger: AAAAGACGTAGTTGTACACCATGGAAACCCCATCCC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp CAGTTTCTCATACAACAGAGAACAAATGTATCCCTGTaGCATCTGAACTGGAAAACCATTTTTAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QFLIQQRTNVSL*HLNWKTIFRGK
Trigger: CTTCCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAGGGATACATTTGTTCTCTGTTGTATGAGAAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCTCTCAGACAAAAACATaGGTTAAGCTTAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCISQTKT*VKLRLC
Trigger: ACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGA...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
3UTR CAA 72 bp TTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTaGTACAAATATTATTGTCCTAAGGGCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LNLIHCLFTLNS*YKYYCPKGLFP
Trigger: GGGGAAAAGGCCCTTAGGACAATAATATTTGTACAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCCATTGGGTTCAAGTTTaGATCAAACATGGTATTACC +
Preference number: 4 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIHWVQV*IKHGIT
Trigger: GGTAATACCATGTTTGATGCAAACTTGAACCCAATG...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR GCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTTCAAATTGGAAAAAGTaGCAAGACTGGATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFSNWKK*QDWMCR
Trigger: TCTGCACATCCAGTCTTGGCACTTTTTCCAATTTGA...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGTTGCATCTGAACTaGAAAACCATTTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFLLHLN*KTIFRG
Trigger: CCCTCTAAAAATGGTTTTCCAGTTCAGATGCAACAG...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CCA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTAGAGATCAGTCAAATTaGAAAAAGTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFRDQSN*KKCQDW
Trigger: CCAGTCTTGGCACTTTTTCCAATTTGACTGATCTCT...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS GCA 90 bp GTGTCCTTGGCCTGCCTCCGGCGTCGCTTCAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTCAGGAGGGATGCGCGCCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: VSLACLRRRFSLRGV*GGDVPVRRDARLRA
Trigger: GGCTCGCAGGCGCGCATCCCTCCTGACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCTGAAGCGACGCCGGAGGCAGGCCAAGGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000531849.5
ENST00000534041.5
ENST00000534798.5
CDS GCA 90 bp AGGCCATCTCCCTGCCTCCGGCGTCGCTTCAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTCAGGAGGGATGCGCGCCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: RPSPCLRRRFSLRGV*GGDVPVRRDARLRA
Trigger: GGCTCGCAGGCGCGCATCCCTCCTGACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCTGAAGCGACGCCGGAGGCAGGGAGATGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525407.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCATCTGCGACGGCCAAATaGGGCGGCAGGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGASATAK*GGREVR
Trigger: CCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGA...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS GCA 90 bp TGTTTCTTTGCCTGCCTCCGGCGTCGCTTCAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTCAGGAGGGATGCGCGCCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: CFFACLRRRFSLRGV*GGDVPVRRDARLRA
Trigger: GGCTCGCAGGCGCGCATCCCTCCTGACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCTGAAGCGACGCCGGAGGCAGGCAAAGAAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340360.10
ENST00000524430.1
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531852.5
ENST00000533598.5
ENST00000684022.1
CDS-3UTR CAA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: GPGHRALGESWGTGRVVHRKWPN*GWLSLS
Trigger: GCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: GRTWAGSHSALGRPWGAGVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...CCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: LRCGPGHRALGESWGTGRCTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQCTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS GCA 90 bp GCTCCACTGCGGTGCCTGCCGCTATCTTCCCCACGCCTTAGTAACTaGGACGCGACGGCAGACAGTGTAGGCGGCAACCGACGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: APLRCLPLSSPRLSN*DATADSVGGNRRPG
Trigger: TCCCGGCCGTCGGTTGCCGCCTACACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGGGGAAGATAGCGGCAGGCACCGCAGTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000527087.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: GPGHRALGESWGTGRVVHSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...GTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRRKWPN*GWLSLS
Trigger: GCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPCTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPREVRP*PVRSRT
Trigger: TGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCT...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LTQRWAGHGERGSPEHCARKWPN*GWLSLS
Trigger: GCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGTCTTCACTTGTTTCTTaGCCTGCCTCCGGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRSSLVS*PASGVA
Trigger: AGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAGA...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAGCTCCAACCAAACCCTaGGGCTTCTTCTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAAPTKP*GFFLRL
Trigger: TAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGC...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGGACAGCATCCTCTTTaGCGATCTGTCCGGTCAACA +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQGQHPL*RSVRST
Trigger: TGTTGACCGGACAGATCGCAAAAGAGGATGCTGTCC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTT +
Preference number: 5 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGFPTFS*CSNQTL
Trigger: AAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTTCCACAGTCAGGCTGTaGAAGGAAAGGTCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGSTVRL*KERSKN
Trigger: ATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGA...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACA +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGALRMYL*LVSDVT
Trigger: TGTAACATCGCTGACAAGCAAGAGGTACATCCTGAG...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACGGACTGCAGCATGAATaGGGGCTCTTTATGGGGACT +
Preference number: 5 (lower is better)
Translates to: GWLSLSAGQAMGSGVVPNGLQHE*GLFMGT
Trigger: AGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCC...GTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGG +
Preference number: 5 (lower is better)
Translates to: LRCGPGHRALGESWGTGRSSILG*DCSMNW
Trigger: CCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGA...CCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGG +
Preference number: 5 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSSSILG*DCSMNW
Trigger: CCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGA...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGGCCGGCTGGTCAACCTaGAGGTGCGGTCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWAGWST*RCGPGH
Trigger: GTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGC...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGGCTGTGTGTGGATTTTaGGTGCTGTATGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQAVCGF*VLYVLW
Trigger: CCAGAGCACATACAGCACCAAAAATCCACACACAGC...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCIAAGR*PLLGAT
Trigger: GGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTAT...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGAGAAGGCCATCTCCTaGATCTTTGACTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EVRSRAQSPRGELGHRPGEKAIS*IFDFGN
Trigger: ATTCCCAAAGTCAAAGATCAAGGAGATGGCCTTCTC...ACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: CLGQGGEILTRGCHLVASREVRP*PVRSRT
Trigger: TGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCT...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAGLESL*SSSISV
Trigger: GACACTGATGCTGGATGACAACAGACTCTCCAACCC...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGACTGCAGCATGAATaGGGGCTCTTTATGGGGACT +
Preference number: 5 (lower is better)
Translates to: SGRTWAGSHSALGRPWGAGLQHE*GLFMGT
Trigger: AGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCC...CGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACATTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 5 (lower is better)
Translates to: STLRCGPGHRALGESWGTLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCTCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCSFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGTCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LRPVAGWSTLRCGPGHRAPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...GGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: RAQSPRGELGHRPGGAHSVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...GCTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVARKWPN*GWLSLS
Trigger: GCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACAAATGTATCCCTGTaGCATCTGAACTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCTNVSL*HLNWKT
Trigger: GGTTTTCCAGTTCAGATGCAACAGGGATACATTTGT...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCCCATGTTGGATGTCTaGCTTTGGCATTCAGAATGG +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQPMLDV*LWHSEW
Trigger: CCATTCTGAATGCCAAAGCAAGACATCCAACATGGG...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: CLGQGGEILTRGCHLVASKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS CCA 90 bp GCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGTACTGCTTGTaGTTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCC +
Preference number: 5 (lower is better)
Translates to: AWNSFNSLLASRYCL*FTSRRSVHWCRTAP
Trigger: GGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000530562.5
CDS-3UTR CAA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTT +
Preference number: 5 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKFPTFS*CSNQTL
Trigger: AAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAA...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAREVRP*PVRSRT
Trigger: TGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCT...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGG +
Preference number: 5 (lower is better)
Translates to: WSTLRCGPGHRALGESWGSSILG*DCSMNW
Trigger: CCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGA...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGCAGATGGGAGGCAGTGGCACGAAGGTCCGGCAAGACGGGGAATGGCCTTCCTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 5 (lower is better)
Translates to: EQMGGSGTKVRQDGEWPSLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...GGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGTCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVSFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 5 (lower is better)
Translates to: SGRTWAGSHSALGRPWGAALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...CGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGACCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: LGWLSLSAGQAMGSGVVPVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...CGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTT +
Preference number: 5 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQVAPSL*PCAPTL
Trigger: AAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCAC...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTT +
Preference number: 5 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGVAPSL*PCAPTL
Trigger: AAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCAC...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCTTTGTTAAGATCCCCTaGGTGTCAGTTTCTCATACA +
Preference number: 5 (lower is better)
Translates to: AVQGTEPSGRAGAQAGWCFVKIP*VSVSHT
Trigger: TGTATGAGAAACTGACACCAAGGGGATCTTAACAAA...GCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVIAAGR*PLLGAT
Trigger: GGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTAT...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS CCA 90 bp GACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTaGCCTCCAGGTACTGCTTGTGGTTCACCAGCCGCCGTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: DSAAGNVPGTPSTAS*PPGTACGSPAAVLS
Trigger: GGACAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCTGCGACGGCCAAATaGGGCGGCAGGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSSATAK*GGREVR
Trigger: CCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGA...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: CLGQGGEILTRGCHLVASAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: PVHPLFIAAGPGTRSCLGMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...GCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ATGGGGAGCGGGGTAGTCCCGAACACTGTGCGCAGAGAGCCACTCACCAGCTGCATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: MGSGVVPNTVRREPLTSCMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...GCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: WARHQVMPGPRRGDPDKGWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...CCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGATGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTGGGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: EGSWEFPPSPFHLSGCRWVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...CCAACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CTCACTCAGCGCTGGGCAGGCCATGGGGAGCGGGGTAGTCCCGAACACTGTGCGGATGTCATCCAGAAGTaGGGCTCTAGTCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LTQRWAGHGERGSPEHCADVIQK*GSSLLW
Trigger: CCAAAGAAGACTAGAGCCCAACTTCTGGATGACATC...CGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCAGCGCTGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAAAATCAAGAACTAGTTaGAAGCCAAGGCAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAKSRTS*KPRQSK
Trigger: CTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTT...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCACACAGCATTATGGTCTTAAATaGTCCTCAGGCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QGTEPSGRAGAQAGWCTQHYGLK*SSGSLF
Trigger: GAAAAGGCTGCCTGAGGACAATTTAAGACCATAATG...CTGTGTGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGTTGCGATCTCTGAGGTaGAAAATCCAGGGTAAGATG +
Preference number: 5 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGELRSLR*KIQGKM
Trigger: CATCTTACCCTGGATTTTCAACCTCAGAGATCGCAA...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321448.12
CDS-3UTR CAA 90 bp TGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCGGACAGCATCCTCTTTaGCGATCTCTGAGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: WSTLRCGPGHRALGESWGGQHPL*RSLRLK
Trigger: TTTCAACCTCAGAGATCGCAAAAGAGGATGCTGTCC...GCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321448.12
CDS-3UTR CAA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGTCCACAGTCAGGCTGTaGAAGGAAAGGTCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGSTVRL*KERSKN
Trigger: ATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGA...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGATCCACAGTCAGGCTGTaGAAGGAAAGGTCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRSTVRL*KERSKN
Trigger: ATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGA...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGTCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: RWARHQVMPGPRRGDPDKSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...CTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSACTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAGGCCGGGTGGTGCAAAGTGGGCTGATGTGTaGTTATTTAAACAGTACCAA +
Preference number: 5 (lower is better)
Translates to: RSRAQSPRGELGHRPGGAKWADV*LFKQYQ
Trigger: TTGGTACTGTTTAAATAACAACACATCAGCCCACTT...TGCACCACCCGGCCTGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGGACAGCATCCTCTTTaGCGATCTGTCCGGTCAACA +
Preference number: 5 (lower is better)
Translates to: CTHSLLPLGQAPGHAWAKGQHPL*RSVRST
Trigger: TGTTGACCGGACAGATCGCAAAAGAGGATGCTGTCC...CTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS CCA 90 bp CAGGGAGGTAAGGCCATTGCCTGTGAGGAGCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACAGATGGCCTCCACAGTCAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QGGKAIACEEQDTEV*QNPQITDGLHSQAV
Trigger: AACAGCCTGACTGTGGAGGCCATCTGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000684022.1
CDS-3UTR CAA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCGGACTGCAGCATGAATaGGGGCTCTTTATGGGGACT +
Preference number: 5 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTGLQHE*GLFMGT
Trigger: AGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCC...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGTCGCTCCTGGAGGAAGCTCTTCAGCAGTGGAGGGACCCCTCGTGTATGGGCTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGG +
Preference number: 5 (lower is better)
Translates to: QSLLEEALQQWRDPSCMGSSILG*DCSMNW
Trigger: CCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGA...GCCCATACACGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCGGACAGCATCCTCTTTaGCGATCTTGTTGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGGQHPL*RSCCRP
Trigger: TGGCCTACAACAAGATCGCAAAAGAGGATGCTGTCC...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCTCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: CLGQGGEILTRGCHLVASSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGTGGCACCCAGTCTATaGCCCTGTGCACCCACTCTT +
Preference number: 5 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSAVAPSL*PCAPTL
Trigger: AAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCAC...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp GCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCGGGAGATGCCCCATGTaGGATGTCTTGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: ATHQLPVTCLELLQQPLGGRCPM*DVLLWH
Trigger: ATGCCAAAGCAAGACATCCAACATGGGGCATCTCCC...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGTTTATAGTCAGAGTCTaGTCTCTGGTGAACAATCTC +
Preference number: 5 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGFIVRV*SLVNNL
Trigger: GAGATTGTTCACCAGAGACAAGACTCTGACTATAAA...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCCTGTCTGCTTTAGGATaGGAGAAGGTACCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVALSALG*EKVPGS
Trigger: GGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAG...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGAAATCAAGAACTAGTTaGAAGCCAAGGCAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: GRLVNLEVRSRAQSPRGEKSRTS*KPRQSK
Trigger: CTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTT...CTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATCATTTTCCTTGGCCTaGGAGAACTTCAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPSFSLA*ENFRPL
Trigger: GAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATGA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS TCA 90 bp CGGTGCTGCTGCTGCTTTGCTTGCTGTGTGACTTCCGGCTGGTGTTaGGCATCTCTGGGCCTAGATCCTCTATTGTTCTGCGACGGCCAA +
Preference number: 5 (lower is better)
Translates to: RCCCCFACCVTSGWC*ASLGLDPLLFCDGQ
Trigger: TTGGCCGTCGCAGAACAATAGAGGATCTAGGCCCAGAGATGCTCAACACCAGCCGGAAGTCACACAGCAAGCAAAGCAGCAGCAGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526047.1
ENST00000533598.5
CDS GCA 90 bp CCAGCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAGATGCCTCCTGTTCTGCGACGGCCA +
Preference number: 5 (lower is better)
Translates to: PASVSPALGTSGCTS*LSAMLQMPPVLRRP
Trigger: TGGCCGTCGCAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CCA 90 bp GCGATGTTACAGATGCCTCCCATATTAGAAGATGCATGGGAAGGGTaGCCAGGATCCCTGAGCTCTGGCTCCGGTGCTGCTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: AMLQMPPILEDAWEG*PGSLSSGSGAAAAL
Trigger: CAAAGCAGCAGCAGCACCGGAGCCAGAGCTCAGGGATCCTGGCCACCCTTCCCATGCATCTTCTAATATGGGAGGCATCTGTAACATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CCA 90 bp GGTGCAAGAGACAAACCACAACAGCCAGGTGCGCCACCTCAAGTCTaGCTCACCCCAATCACATCTTTGCTGGCTGACCTCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GARDKPQQPGAPPQV*LTPITSLLADLTLE
Trigger: CTCCAAGGTGAGGTCAGCCAGCAAAGATGTGATTGGGGTGAGCCAGACTTGAGGTGGCGCACCTGGCTGTTGTGGTTTGTCTCTTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533990.1
CDS-3UTR CAA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCGCTCCAACCAAACCCTaGGGCTTCTTCTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTAPTKP*GFFLRL
Trigger: TAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGC...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCGACTCTTTCTTCCCCTaGAACTCAAAAGAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGDSFFP*NSKEVA
Trigger: GGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGTC...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGTCCACAGTCAGGCTGTaGAAGGAAAGGTCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: MPGPRRGDPDKGMPPCGQSTVRL*KERSKN
Trigger: ATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGA...CTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCTCTGCGACGGCCAAATaGGGCGGCAGGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCSATAK*GGREVR
Trigger: CCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGA...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCAAGTGGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATG +
Preference number: 5 (lower is better)
Translates to: GPRRGDPDKGMPPCGQQVGCTSC*SAMLQM
Trigger: CATCTGTAACATCGCTGACAAGCAAGAGGTACATCC...CACTTGCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATG +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAGCTSC*SAMLQM
Trigger: CATCTGTAACATCGCTGACAAGCAAGAGGTACATCC...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGGAATGGCCTTCCAGGTTCTCAGTGGGCATCTCTGACTCCACAGAAGTGCTTTCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GEWPSRFSVGISDSTEVLSFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...AAGCACTTCTGTGGAGTCAGAGATGCCCACTGAGAACCTGGAAGGCCATTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCATGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: WQNSSMNSRKWPNLGWLSWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...TGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGGAGACTTGGTTGTCGTCATGCGCGGGTGATGGAGCACCAGAGGCTGCTTCGGCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: GRLGCRHARVMEHQRLLRHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...CCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCGATGTCATCCAGAAGTaGGGCTCTAGTCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: VMPGPRRGDPDKGMPPCGDVIQK*GSSLLW
Trigger: CCAAAGAAGACTAGAGCCCAACTTCTGGATGACATC...GCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGAAGTGGGCTGATGTGTaGTTATTTAAACAGTACCAA +
Preference number: 5 (lower is better)
Translates to: PVAGWSTLRCGPGHRALGKWADV*LFKQYQ
Trigger: TTGGTACTGTTTAAATAACAACACATCAGCCCACTT...CCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAACCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GLFTMHSGVGADGRQWHEPGHAL*GMFLSA
Trigger: TGCTGACAGAAACATCCCCAACAGGGCATGCCCTGG...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTCTCTTCACTATGCACAGTGGAGTTGGAGCAGATGGGAGGCAGTGGCACGAAAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GLFTMHSGVGADGRQWHEKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...TTCGTGCCACTGCCTCCCATCTGCTCCAACTCCACTGTGCATAGTGAAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAGCCCACCAATGAGAGCATaGGGTTCAAGTTTGCATCAA +
Preference number: 5 (lower is better)
Translates to: CLGQGGEILTRGCHLVASPPMRA*GSSLHQ
Trigger: TTGATGCAAACTTGAACCCAATGCTCTCATTGGTGG...GCTGGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACATAGCAGCAGGCAGATaGCCCCTTCTTGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDIAAGR*PLLGAT
Trigger: GGTGGCCCCAAGAAGGGGCAATCTGCCTGCTGCTAT...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGGAGAGCTGGGGCACAAAGGCAAAGCAAGGTTaGTTCATCTTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: STLRCGPGHRALGESWGTKAKQG*FIFLSC
Trigger: ACAGGAAAGGAAGATGAACAAACCTTGCTTTGCCTT...TGTGCCCCAGCTCTCCCCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCTGAGGCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAAAGGCAAAGCAAGGTTaGTTCATCTTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: ALRPVAGWSTLRCGPGHRKAKQG*FIFLSC
Trigger: ACAGGAAAGGAAGATGAACAAACCTTGCTTTGCCTT...TCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGCCTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCCTGTGGCCGGCTGGTCAACCTTGAGGTGCGGTCCAGGGCACAGAGCCCTCGGGACTGGATGTGCAGATaGTTCTATGTATTATCAGTA +
Preference number: 5 (lower is better)
Translates to: ACGRLVNLEVRSRAQSPRDWMCR*FYVLSV
Trigger: TACTGATAATACATAGAACAATCTGCACATCCAGTC...CCGAGGGCTCTGTGCCCTGGACCGCACCTCAAGGTTGACCAGCCGGCCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCCAGAAGCAAGAGGATaGGGTCCAGAGACCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RRYLDPCGLPLLAASSPTPEARG*GPETLG
Trigger: TCCAAGGGTCTCTGGACCCAATCCTCTTGCTTCTGG...AGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS CCA 90 bp CCAGTGTCCTTGGCCTTCCTCCGGCACGCGAAGCAGATTTCTGGCTaGGAAGCAGTTGTTCAGGTAAGGCTTCCCATCATCCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: PVSLAFLRHAKQISG*EAVVQVRLPIIQLV
Trigger: TACAAGCTGGATGATGGGAAGCCTTACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCGTGCCGGAGGAAGGCCAAGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS CCA 90 bp CTAACCAGTGTCCTTGGCCTTCCTCCGGCACGCGAAGCAGATTTCTaGCTGGGAAGCAGTTGTTCAGGTAAGGCTTCCCATCATCCAGCT +
Preference number: 5 (lower is better)
Translates to: LTSVLGLPPAREADF*LGSSCSGKASHHPA
Trigger: AGCTGGATGATGGGAAGCCTTACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCGTGCCGGAGGAAGGCCAAGGACACTGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTGCTCCAACCAAACCCTaGGGCTTCTTCTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTAPTKP*GFFLRL
Trigger: TAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGC...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 5 (lower is better)
Translates to: GTWILVDCHCWLPPLQLIALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...GATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAATGGACTCTGTGCTCTaGGAGTCCTCATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: KVPGSLWTATAGCLLSNSMDSVL*ESSSDG
Trigger: CCCATCAGATGAGGACTCCAAGAGCACAGAGTCCAT...TGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTTGGGAAGGAAGGCAGTaGGGAGTTTCCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: LPQPDLSSELAATWDSFPWEGRQ*GVSSES
Trigger: GGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCA...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGATGTCATCCAGAAGTaGGGCTCTAGTCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVDVIQK*GSSLLW
Trigger: CCAAAGAAGACTAGAGCCCAACTTCTGGATGACATC...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTGGGCAGGCCATGGGGTTTGTTAAGATCCCCTaGGTGTCAGTTTCTCATACA +
Preference number: 5 (lower is better)
Translates to: RKWPNLGWLSLSAGQAMGFVKIP*VSVSHT
Trigger: TGTATGAGAAACTGACACCAAGGGGATCTTAACAAA...CCCCATGGCCTGCCCAGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTGCTGTGTGTGGATTTTaGGTGCTGTATGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTAVCGF*VLYVLW
Trigger: CCAGAGCACATACAGCACCAAAAATCCACACACAGC...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCCCACCAATGAGAGCATaGGGTTCAAGTTTGCATCAA +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAPPMRA*GSSLHQ
Trigger: TTGATGCAAACTTGAACCCAATGCTCTCATTGGTGG...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGGAGGAGTGGCACAGGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATGGGTCCAGAGACCCTaGGAAAATGGGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LEEWHRSGCFSICCRACAWVQRP*ENGMVW
Trigger: CCACACCATCCCATTTTCCAAGGGTCTCTGGACCCA...TGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCCTGTGCCACTCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS TCA 90 bp TGTGCTCCAACCAAACCCTTGGGCTTCTTCTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCTTGGCCTTCCTCCGGCACGCGAAGC +
Preference number: 5 (lower is better)
Translates to: CAPTKPLGFFLRLPF*TTNQCPWPSSGTRS
Trigger: GCTTCGCGTGCCGGAGGAAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS TCA 90 bp TGTGCTCCAACCAAACCCTTGGGCTTCTTCTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCTTGGCCTGCCTCCGGCGTCGCTTCA +
Preference number: 5 (lower is better)
Translates to: CAPTKPLGFFLRLPF*TTNQCPWPASGVAS
Trigger: TGAAGCGACGCCGGAGGCAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000531849.5
ENST00000534041.5
ENST00000534798.5
CDS-3UTR CAA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATCTTCACTTGTTTCTTaGCCTGCCTCCGGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: PGQHIETQLPVTCLELLQSSLVS*PASGVA
Trigger: AGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAGA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTT +
Preference number: 5 (lower is better)
Translates to: AELIHELEEVAELGLALTFPTFS*CSNQTL
Trigger: AAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAA...AGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CTGGCTGTGGGCTCCTGGCAGAACTCATCCATGAACTCGAGGAAGTGGCCGAACGACTCTTTCTTCCCCTaGAACTCAAAAGAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: LAVGSWQNSSMNSRKWPNDSFFP*NSKEVA
Trigger: GGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGTC...GTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCCAGGACTCTTTCTTCCCCTaGAACTCAAAAGAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: TQLPVTCLELLQQPLGLQDSFFP*NSKEVA
Trigger: GGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGTC...CTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: QPAVCFRIGEGTWILVDCREVRP*PVRSRT
Trigger: TGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCT...GCAGTCCACAAGGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAGCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGCCACTCACCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACA +
Preference number: 5 (lower is better)
Translates to: SHSPAAGNVPGTPSTASWLRMYL*LVSDVT
Trigger: TGTAACATCGCTGACAAGCAAGAGGTACATCCTGAG...CCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGGTGAGTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527087.5
ENST00000531849.5
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527087.5
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGTGCACCCACTCTTTATaGCCGCTGGGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMCTHSL*PLGQAP
Trigger: TGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCA...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCAAGGAGGGGAGATCCTTTTATAGTCAGAGTCTaGTCTCTGGTGAACAATCTC +
Preference number: 5 (lower is better)
Translates to: YCRWARHQVMPGPRRGDPFIVRV*SLVNNL
Trigger: GAGATTGTTCACCAGAGACAAGACTCTGACTATAAA...AGGATCTCCCCTCCTTGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTGGTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCAAAGGTACCTGGATCCTaGTGGACTGCCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LVLYVLWEMPHVGCLALAKVPGS*WTATAG
Trigger: GCCAGCAGTGGCAGTCCACAAGGATCCAGGTACCTT...TGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATCCATGAACTCGAGGAAGTGGCCGAACTTGGGCTGGCTCTCACTCAGCGCTCTGTCTGCTTTAGGATaGGAGAAGGTACCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SSMNSRKWPNLGWLSLSALSALG*EKVPGS
Trigger: GGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAG...AGCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp TCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGGCCAAGGCAAAGCAAGGTTaGTTCATCTTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SCLGQGGEILTRGCHLVAKAKQG*FIFLSC
Trigger: ACAGGAAAGGAAGATGAACAAACCTTGCTTTGCCTT...GGCCACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS TCA 90 bp CCCGACGTTCAGCTTGTGCTCCAACCAAACCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCACTAACCAGTGTCCTTGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: PDVQLVLQPNPWASS*GYLSEPLTSVLGLP
Trigger: AGGCAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000531849.5
ENST00000534041.5
ENST00000534798.5
CDS TCA 90 bp TGCGCCACCTCAAGTCTGGCTCACCCCAATCACATCTTTGCTGGCTaGCCTCACCTTGGAGAACTTCAGGCCACTCACATTAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: CATSSLAHPNHIFAG*PHLGELQATHINGA
Trigger: TGCACCATTAATGTGAGTGGCCTGAAGTTCTCCAAGGTGAGGTCAGCCAGCAAAGATGTGATTGGGGTGAGCCAGACTTGAGGTGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533990.1
CDS GCA 90 bp TGGGCCTGGCAGAAGGTCATGGAGGAGGGTGTTATCCCAGGTTTATaGACAGACTTCCCTGGCCTAACTTCATACAGTCACAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: WAWQKVMEEGVIPGL*TDFPGLTSYSHSNR
Trigger: CCTGTTGCTGTGACTGTATGAAGTTAGGCCAGGGAAGTCTGTGCATAAACCTGGGATAACACCCTCCTCCATGACCTTCTGCCAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS GCA 90 bp GATTCCAGGCACTGTGGAGTGAGCAGCTCTACAGCCAGGTTGGTTTaGATACATTATAATAGGCTGCACTCTTCCTGGGGGTGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: DSRHCGVSSSTARLV*IHYNRLHSSWGWES
Trigger: GGACTCCCACCCCCAGGAAGAGTGCAGCCTATTATAATGTATGCAAACCAACCTGGCTGTAGAGCTGCTCACTCCACAGTGCCTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS CCA 90 bp GGGGTTGGAGAGTCTGTTGTCATCCAGCATCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCTCTTGCTTGTCAGCGATGTTACAGA +
Preference number: 5 (lower is better)
Translates to: GVGESVVIQHQCLQR*EPQDVPLACQRCYR
Trigger: TCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000526047.1
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CCA 90 bp AGAAGTTGGGCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTaGGCCTGGCAGAAGGTCATGGAGGAGGGTGTTATCCCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: RSWALVFFGGGIGIL*AWQKVMEEGVIPGL
Trigger: TAAACCTGGGATAACACCCTCCTCCATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 90 bp AATGAAGATGTCATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGCCTGGCAGAAGGTCATGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: NEDVIQKLGSSLLWG*NRDSLGLAEGHGGG
Trigger: CCCTCCTCCATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS-3UTR CAA 90 bp TGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCAGGTCATGCCTGGGCCATTGAAGTCATTTTCCTaGGCATTAATGGTGCACAGA +
Preference number: 5 (lower is better)
Translates to: CAPTLYCRWARHQVMPGPLKSFS*ALMVHR
Trigger: TCTGTGCACCATTAATGCCAAGGAAAATGACTTCAA...TGGCCCAGGCATGACCTGGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000527087.5
CDS-3UTR CAA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: WLTPVITALWEAGGSFELREVRP*PVRSRT
Trigger: TGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCT...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGACTGCAGCATGAATaGGGGCTCTTTATGGGGACT +
Preference number: 5 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAGLQHE*GLFMGT
Trigger: AGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCC...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGTCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMSFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCCTTTGAGGGAGACTaGGTTGTCGTCATGCGCGGG +
Preference number: 5 (lower is better)
Translates to: QWLSIAVKMLFASNTSALSFEGD*VVVMRG
Trigger: CCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: IETQLPVTCLELLQQPLGWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGCCAGGCACCACAAATGTATCCCTGTaGCATCTGAACTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: HPVYCPVHPLFIAAGPGTTNVSL*HLNWKT
Trigger: GGTTTTCCAGTTCAGATGCAACAGGGATACATTTGT...GGTGCCTGGCCCAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGGAGATGCCCCATGTaGGATGTCTTGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAGRCPM*DVLLWH
Trigger: ATGCCAAAGCAAGACATCCAACATGGGGCATCTCCC...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCTCCACAGTCAGGCTGTaGAAGGAAAGGTCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: IETQLPVTCLELLQQPLGSTVRL*KERSKN
Trigger: GTTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGA...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCGGACAGCATCCTCTTTaGCGATCTCCTGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: WLTPVITALWEAGGSFELGQHPL*RSPEPS
Trigger: GCTGGGCTCAGGAGATCGCAAAAGAGGATGCTGTCC...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS TCA 90 bp CCCGACGTTCAGCTTGTGCTCCAACCAAACCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCACTAACCAGTGTCCTTGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PDVQLVLQPNPWASS*GYLSEPLTSVLGLP
Trigger: AGGAAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS TCA 90 bp GGCCTTGGAGAACTTCAGGCCACTCACATTAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTGGTGCTTCAGCAGAAAAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLGELQATHINGAQI*WLPHTVVLQQKSLV
Trigger: GACCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCCATCAGATCTGTGCACCATTAATGTGAGTGGCCTGAAGTTCTCCAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000321448.12
ENST00000525407.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000533598.5
ENST00000534041.5
ENST00000684022.1
CDS TCA 90 bp TTCCCTGGGGGATGGGCCATGGTTGCAAGTGTGAGTGCTAAGCAATaGACCCTAGAAAACAACAGCACCTCTAGAAAGATGGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: FPGGWAMVASVSAKQ*TLENNSTSRKMGTL
Trigger: CAGCGTGCCCATCTTTCTAGAGGTGCTGTTGTTTTCTAGGGTTCATTGCTTAGCACTCACACTTGCAACCATGGCCCATCCCCCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 90 bp CAAGCGAATGAAGATGTCATCCAGAAGTTGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCTCTGGGCCTGGCAGAAGGTCATGGA +
Preference number: 5 (lower is better)
Translates to: QANEDVIQKLGSSLL*GWNRDSLGLAEGHG
Trigger: TCCATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTCATTCGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS-3UTR CAA 90 bp AAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGACTCTTTCTTCCCCTaGAACTCAAAAGAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: KAGLGRGGQETDSRESAEDSFFP*NSKEVA
Trigger: GGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGTC...TTCAGCACTTTCCCTAGAATCTGTCTCCTGACCACCCCGCCCCAGACCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACA +
Preference number: 5 (lower is better)
Translates to: IETQLPVTCLELLQQPLGLRMYL*LVSDVT
Trigger: TGTAACATCGCTGACAAGCAAGAGGTACATCCTGAG...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACTGGGTGCTTCAGCATTaGTTGCAGGGCTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: WTATAGCLLSNSSEEHFDWVLQH*LQGLCI
Trigger: AATGCACAAGCCCTGCAACAAATGCTGAAGCACCCA...GTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCCAGCAGTGGCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGTGTCCAGCTTGGGCTaGGAGGAGTGGCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPVSSLG*EEWHRS
Trigger: ACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACAC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGAGGCACCAAGCTCATCCTGGTTCTCACCTAGCCAGAAGCAAGAGGATTGGGGATGTCATCCAGAAGTaGGGCTCTAGTCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: ERHQAHPGSHLARSKRIGDVIQK*GSSLLW
Trigger: CCAAAGAAGACTAGAGCCCAACTTCTGGATGACATC...CCCAATCCTCTTGCTTCTGGCTAGGTGAGAACCAGGATGAGCTTGGTGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGTCATGCCTGGGCCAAGGAGGGGAGATCCTGACAAGGGGATGCCACCTTGTGAAATCAAGAACTAGTTaGAAGCCAAGGCAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: RSCLGQGGEILTRGCHLVKSRTS*KPRQSK
Trigger: CTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTT...CACAAGGTGGCATCCCCTTGTCAGGATCTCCCCTCCTTGGCCCAGGCATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CCTGGGCAACATATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAATCATTTTCCTTGGCCTaGGAGAACTTCAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: PGQHIETQLPVTCLELLQSFSLA*ENFRPL
Trigger: GAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATGA...TTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAATATGTTGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS TCA 90 bp CCCGACGTTCAGCTTGTGCTCCAACCAAACCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCACTAACCAGTGTCCTTGGCTTGATC +
Preference number: 5 (lower is better)
Translates to: PDVQLVLQPNPWASS*GYLSEPLTSVLGLI
Trigger: GATCAAGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524430.1
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531852.5
ENST00000533598.5
CDS TCA 90 bp CACCTTGGAGAACTTCAGGCCACTCACATTAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTGGTGCTTCAGCAGAAAAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HLGELQATHINGAQI*WLPHTVVLQQKSLV
Trigger: GACCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCCATCAGATCTGTGCACCATTAATGTGAGTGGCCTGAAGTTCTCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533990.1
CDS GCA 90 bp CCAGCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAGATGCCTCCCATATTAGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: PASVSPALGTSGCTS*LSAMLQMPPILEDA
Trigger: TGCATCTTCTAATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS-3UTR CAA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTT +
Preference number: 5 (lower is better)
Translates to: QWLSIAVKMLFASNTSALFPTFS*CSNQTL
Trigger: AAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAA...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CCCATGCACAGCTCTAGCCTTGTGAGTCACTGGCTGTGGGCTCCTGGCAGAACTTTGAAGTCATTTTCCTaGGCATTAATGGTGCACAGA +
Preference number: 5 (lower is better)
Translates to: PMHSSSLVSHWLWAPGRTLKSFS*ALMVHR
Trigger: TCTGTGCACCATTAATGCCAAGGAAAATGACTTCAA...AGTTCTGCCAGGAGCCCACAGCCAGTGACTCACAAGGCTAGAGCTGTGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527087.5
CDS-3UTR CAA 90 bp TTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTATCTGCGACGGCCAAATaGGGCGGCAGGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FCQQGHGMESSGLMCCYLSATAK*GGREVR
Trigger: CCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGA...TAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: QWLSIAVKMLFASNTSALAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: LPQPDLSSELAATWDSFPVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...AGGAAAGGAATCCCAAGTTGCTGCCAGCTCTGATGAGAGATCAGGTTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVPGHAL*GMFLSA
Trigger: TGCTGACAGAAACATCCCCAACAGGGCATGCCCTGG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS TCA 90 bp AAGCTTGGAGAACTTCAGGCCACTCACATTAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTGGTGCTTCAGCAGAAAAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: KLGELQATHINGAQI*WLPHTVVLQQKSLV
Trigger: GACCAGGCTTTTCTGCTGAAGCACCACTGTGTGAGGAAGCCATCAGATCTGTGCACCATTAATGTGAGTGGCCTGAAGTTCTCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524430.1
CDS GCA 90 bp GAACTCAAAAGAAGTCGCCTTCAGGCTTTCCCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGGCTTCTTCTTGAGGTTACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ELKRSRLQAFPTFSL*SNQTLGLLLEVTFL
Trigger: CAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAAAGCCTGAAGGCGACTTCTTTTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS GCA 90 bp TGCATACATTATAATAGGCTGCACTCTTCCTGGGGGTGGGAGTCCTaGCTTGGAAGCCCTACCTTCCATGATTCCTTCCGAGACATCAAA +
Preference number: 5 (lower is better)
Translates to: CIHYNRLHSSWGWES*LGSPTFHDSFRDIK
Trigger: TTTGATGTCTCGGAAGGAATCATGGAAGGTAGGGCTTCCAAGGCAGGACTCCCACCCCCAGGAAGAGTGCAGCCTATTATAATGTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS-3UTR CAA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCGCTCCAACCAAACCCTaGGGCTTCTTCTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: WLTPVITALWEAGGSFELAPTKP*GFFLRL
Trigger: TAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGC...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCATCTGCGACGGCCAAATaGGGCGGCAGGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: VKMLFASNTSALSKTLRASATAK*GGREVR
Trigger: CCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGA...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GTGCTGTATGTGCTCTGGGAGATGCCCCATGTTGGATGTCTTGCTTTGGCATTCCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACA +
Preference number: 5 (lower is better)
Translates to: VLYVLWEMPHVGCLALAFLRMYL*LVSDVT
Trigger: TGTAACATCGCTGACAAGCAAGAGGTACATCCTGAG...GAATGCCAAAGCAAGACATCCAACATGGGGCATCTCCCAGAGCACATACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: GVGASAFVAGLVHSSGFPVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...AGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531449.5
ENST00000531849.5
CDS-3UTR CAA 90 bp ATTGAGACTCAGCTGCCGGTAACGTGCCTGGAACTCCTTCAACAGCCTCTTGGCAGCAACACAAGTGCGTaGTCAAAAACTTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: IETQLPVTCLELLQQPLGSNTSA*SKTLRA
Trigger: TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCT...GCCAAGAGGCTGTTGAAGGAGTTCCAGGCACGTTACCGGCAGCTGAGTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS TCA 90 bp CTGAAACAGAAGAGAAACAGAATGAAGGTTGGTGAGACCGCTGATTaGTGCCTAGAGCACCCAGGATATAGGTCTGCCATCCACTGTGTG +
Preference number: 5 (lower is better)
Translates to: LKQKRNRMKVGETAD*CLEHPGYRSAIHCV
Trigger: CACACAGTGGATGGCAGACCTATATCCTGGGTGCTCTAGGCATCAATCAGCGGTCTCACCAACCTTCATTCTGTTTCTCTTCTGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS-3UTR CAA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPGLESL*SSSISV
Trigger: GACACTGATGCTGGATGACAACAGACTCTCCAACCC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLGLESL*SSSISV
Trigger: GACACTGATGCTGGATGACAACAGACTCTCCAACCC...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGGACTGCAGCATGAATaGGGGCTCTTTATGGGGACT +
Preference number: 5 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPGLQHE*GLFMGT
Trigger: AGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTAGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLAASAP*GFRFSP
Trigger: AGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGC...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGGTTGACTCCTGTGATAACAGCACTTTGGGAGGCAGGAGGATCATTTGAGCTCGTGCTTCAGCATTTGTaGCAGGGCTTGTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: WLTPVITALWEAGGSFELVLQHL*QGLCIL
Trigger: AAGAATGCACAAGCCCTGCAACAAATGCTGAAGCAC...GAGCTCAAATGATCCTCCTGCCTCCCAAAGTGCTGTTATCACAGGAGTCAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGGGAGATGCCCCATGTaGGATGTCTTGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPGRCPM*DVLLWH
Trigger: ATGCCAAAGCAAGACATCCAACATGGGGCATCTCCC...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTCACCAGCCGCCGTTCTGTCCACTGGTGCAGGACAGCACCTGCAGGAAAAGAAAAGTGGGCTGATGTGTaGTTATTTAAACAGTACCAA +
Preference number: 5 (lower is better)
Translates to: FTSRRSVHWCRTAPAGKEKWADV*LFKQYQ
Trigger: TTGGTACTGTTTAAATAACAACACATCAGCCCACTT...TTCTTTTCCTGCAGGTGCTGTCCTGCACCAGTGGACAGAACGGCGGCTGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp AGGAAGGCAGTTGGGAGTTTCCTCCGAGTCCCTTTCACCTCTCTGGGTGCCGTTAACCTGATACACTGTTaGTTTACTCTCAACTCTTTG +
Preference number: 5 (lower is better)
Translates to: RKAVGSFLRVPFTSLGAVNLIHC*FTLNSL
Trigger: CAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTT...AACGGCACCCAGAGAGGTGAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTCATTATGGTCTTAAATaGTCCTCAGGCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAHYGLK*SSGSLF
Trigger: GAAAAGGCTGCCTGAGGACAATTTAAGACCATAATG...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS TCA 90 bp GAAGGCAATGCTGAACCTAATGGAGAGATTCCAGGCACTGTGGAGTaGGCAGCTCTACAGCCAGGTTGGTTTGCATACATTATAATAGGC +
Preference number: 5 (lower is better)
Translates to: EGNAEPNGEIPGTVE*AALQPGWFAYIIIG
Trigger: GCCTATTATAATGTATGCAAACCAACCTGGCTGTAGAGCTGCTCACTCCACAGTGCCTGGAATCTCTCCATTAGGTTCAGCATTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS-3UTR CAA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATG +
Preference number: 5 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCGCTSC*SAMLQM
Trigger: CATCTGTAACATCGCTGACAAGCAAGAGGTACATCC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACA +
Preference number: 5 (lower is better)
Translates to: GCLLSNSSEEHFDKDRGLLRMYL*LVSDVT
Trigger: TGTAACATCGCTGACAAGCAAGAGGTACATCCTGAG...AAGTCCTCTGTCTTTGTCAAAATGCTCTTCTGATGAGTTGGAGAGGAGGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGG +
Preference number: 5 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVSSILG*DCSMNW
Trigger: CCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGA...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGTCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: CGENVVCQQHKCVVKNFESFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...CTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTAGGAAGTGGCCGAACTaGGGCTGGCTCTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCRKWPN*GWLSLS
Trigger: GCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCT...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGCATTGGGTTCAAGTTaGCATCAAACATGGTATTAC +
Preference number: 5 (lower is better)
Translates to: ECMWHPVYCPVHPLFIAAALGSS*HQTWYY
Trigger: GTAATACCATGTTTGATGCAAACTTGAACCCAATGC...AGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AATGCATGTGGCACCCAGTCTATTGCCCTGTGCACCCACTCTTTATTGCCGCTGGCATTGGGTTCAAGTTaGCATCAAACATGGTATTAC +
Preference number: 5 (lower is better)
Translates to: NACGTQSIALCTHSLLPLALGSS*HQTWYY
Trigger: GTAATACCATGTTTGATGCAAACTTGAACCCAATGC...CAGCGGCAATAAAGAGTGGGTGCACAGGGCAATAGACTGGGTGCCACATGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGACCAGTGTCCTTGGCTaGATCTTTGACTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: QWLSIAVKMLFASNTSALTSVLG*IFDFGN
Trigger: ATTCCCAAAGTCAAAGATCAAGCCAAGGACACTGGT...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS TCA 90 bp TACCAAGAACAACCAGCACACAGTCATAAGGAGGAGGCTGCAGAGTaGTTTCATTCTTGGGACCGTCAGAATGAGATGAGTCTAACAGCT +
Preference number: 5 (lower is better)
Translates to: YQEQPAHSHKEEAAE*FHSWDRQNEMSLTA
Trigger: AGCTGTTAGACTCATCTCATTCTGACGGTCCCAAGAATGAAATCACTCTGCAGCCTCCTCCTTATGACTGTGTGCTGGTTGTTCTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATTCTTCACTTGTTTCTTaGCCTGCCTCCGGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHSSLVS*PASGVA
Trigger: AGCGACGCCGGAGGCAGGCAAAGAAACAAGTGAAGA...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGAGAAGGCCATCTCCTaGATCTTTGACTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCEKAIS*IFDFGN
Trigger: ATTCCCAAAGTCAAAGATCAAGGAGATGGCCTTCTC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAATCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp AGGAGCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTACATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: RSRDGVSMVYNYVFWHKLHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...TAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCACATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: EHWVQVCIKHGITNAEPPHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...TGGAGGCTCAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAACATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCATTTGTTGCAGGGCTaGTGCATTCTTCTGGATTCC +
Preference number: 5 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVHLLQG*CILLDS
Trigger: GGAATCCAGAAGAATGCACAAGCCCTGCAACAAATG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGATCCTTCAACAGCCTCTaGGCCTCCAGGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERSFNSL*ASRYCL
Trigger: CAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGA...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp AGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCCCAGGGCATGCCCTGTaGGGGATGTTTCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SHRMLQLEWAWKSSKLNFPGHAL*GMFLSA
Trigger: TGCTGACAGAAACATCCCCAACAGGGCATGCCCTGG...GAAGTTTAACTTGGATGATTTCCATGCCCATTCCAGCTGTAACATTCTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp GGAGTGGGTGCTTCAGCATTTGTTGCAGGGCTTGTGCATTCTTCTGGATTCCCTGCATTGGGTTCAAGTTaGCATCAAACATGGTATTAC +
Preference number: 5 (lower is better)
Translates to: GVGASAFVAGLVHSSGFPALGSS*HQTWYY
Trigger: GTAATACCATGTTTGATGCAAACTTGAACCCAATGC...AGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAATGCTGAAGCACCCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGTGGCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGATTGCGGTGAAAATGTaGTTTGCCAGCAACACAAGT +
Preference number: 5 (lower is better)
Translates to: QWLSIAVKMLFASNTSALIAVKM*FASNTS
Trigger: ACTTGTGTTGCTGGCAAACAACATTTTCACCGCAAT...CAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGATTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTT +
Preference number: 5 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERFPTFS*CSNQTL
Trigger: AAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAA...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: VKMLFASNTSALSKTLRAGLESL*SSSISV
Trigger: GACACTGATGCTGGATGACAACAGACTCTCCAACCC...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTGGAAGTGAACATATCTaGGTTGTCTCTGAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCGSEHI*VVSEVE
Trigger: TTCAACCTCAGAGACAACCAAGATATGTTCACTTCC...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 5 (lower is better)
Translates to: KFLANGLLAVAQHCGENVLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCACCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: VKMLFASNTSALSKTLRAPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp GCAGGGATGGGGTTTCCATGGTGTACAACTACGTCTTTTGGCATAAGTTATGTCCCACCAATGAGAGCATaGGGTTCAAGTTTGCATCAA +
Preference number: 5 (lower is better)
Translates to: AGMGFPWCTTTSFGISYVPPMRA*GSSLHQ
Trigger: TTGATGCAAACTTGAACCCAATGCTCTCATTGGTGG...GACATAACTTATGCCAAAAGACGTAGTTGTACACCATGGAAACCCCATCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGAAGTGTGACAATGCTGCTGTGGCCTGGGTTCCAAGAAAGAATGCATGTGGCAGACTGGATGTGCAGATaGTTCTATGTATTATCAGTA +
Preference number: 5 (lower is better)
Translates to: GSVTMLLWPGFQERMHVADWMCR*FYVLSV
Trigger: TACTGATAATACATAGAACAATCTGCACATCCAGTC...TGCCACATGCATTCTTTCTTGGAACCCAGGCCACAGCAGCATTGTCACACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATGCTCCAACCAAACCCTaGGGCTTCTTCTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHAPTKP*GFFLRL
Trigger: TAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGC...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTTGAGGGAGACTTGGTaGTCGTCATGCGCGGGTGAT +
Preference number: 5 (lower is better)
Translates to: TVKETHESGCSVYSQSLVLRETW*SSCAGD
Trigger: ATCACCCGCGCATGACGACAACCAAGTCTCCCTCAA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 5 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTCCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: FWCLKSRTSLKPRQSKVCPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...ACAAACCTTGCTTTGCCTTGGCTTCAAACTAGTTCTTGATTTAAGACACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTTTGTTAAGATCCCCTaGGTGTCAGTTTCTCATACA +
Preference number: 5 (lower is better)
Translates to: GCFCQQGHGMESSGLMCCFVKIP*VSVSHT
Trigger: TGTATGAGAAACTGACACCAAGGGGATCTTAACAAA...ACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGCTGACAGAAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAGCTGTGTGTGGATTTTaGGTGCTGTATGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERAVCGF*VLYVLW
Trigger: CCAGAGCACATACAGCACCAAAAATCCACACACAGC...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTCTGTCTGCTTTAGGATaGGAGAAGGTACCTGGATCC +
Preference number: 5 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFLSALG*EKVPGS
Trigger: GGATCCAGGTACCTTCTCCAATCCTAAAGCAGACAG...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTTTGGCATTCAGAATGGCAGTAGAGATTAGGAGCAGGGATGGGGTTTCCATGAACCTGATACACTGTTaGTTTACTCTCAACTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALAFRMAVEIRSRDGVSMNLIHC*FTLNSL
Trigger: CAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTT...CATGGAAACCCCATCCCTGCTCCTAATCTCTACTGCCATTCTGAATGCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAAACTTTGAGAGCAGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATG +
Preference number: 5 (lower is better)
Translates to: VKMLFASNTSALSKTLRAGCTSC*SAMLQM
Trigger: CATCTGTAACATCGCTGACAAGCAAGAGGTACATCC...TGCTCTCAAAGTTTTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGCTCTAGCATATCCTTaGAGGGAGACTTGGTTGTCG +
Preference number: 5 (lower is better)
Translates to: KFLANGLLAVAQHCGENVALAYP*RETWLS
Trigger: CGACAACCAAGTCTCCCTCAAAGGATATGCTAGAGC...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGATCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGCCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: VPFRKLTSTQQAAFYILEPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...CTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp CAACCATTCATGCTCCTAATGAAGGAACCAAGAAAGAGTCTGAGTAAAGAACGAAGAGCTGGCAGCAACTaGGGATTCCTTTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QPFMLLMKEPRKSLSKERRAGSN*GFLSFF
Trigger: GAAAAAGGAAAGGAATCCCAAGTTGCTGCCAGCTCT...TCGTTCTTTACTCAGACTCTTTCTTGGTTCCTTCATTAGGAGCATGAATGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAATCATTTTCCTTGGCCTaGGAGAACTTCAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: THESGCSVYSQSLVSGEQSFSLA*ENFRPL
Trigger: GAGTGGCCTGAAGTTCTCCAAGGCCAAGGAAAATGA...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS-3UTR CAA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGTTGAAGTCATTTTCCTaGGCCTTGGAGAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: TNESIGFKFASNMVLPTLLKSFS*ALENFR
Trigger: CCTGAAGTTCTCCAAGGCCAAGGAAAATGACTTCAA...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321448.12
ENST00000531849.5
CDS-3UTR CAA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFGLESL*SSSISV
Trigger: GACACTGATGCTGGATGACAACAGACTCTCCAACCC...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCCTCTCTGGGTGCCGTaGGTGGTTTCTTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFPLWVP*VVSFGL
Trigger: AAGACCAAAAGAAACCACCAACGGCACCCAGAGAGG...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCTCAGCATTGCGGTGAAAATGTTGTTTGCCAGCAACACAAGTGCGTTGTCAAAGCGTTGTCAAAAACTTaGAGAGCAGCAGTAAAAATT +
Preference number: 5 (lower is better)
Translates to: AQHCGENVVCQQHKCVVKALSKT*RAAVKI
Trigger: AATTTTTACTGCTGCTCTCAAAGTTTTTGACAACGC...TTTGACAACGCACTTGTGTTGCTGGCAAACAACATTTTCACCGCAATGCTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGACTCTTTCTTCCCCTaGAACTCAAAAGAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIDSFFP*NSKEVA
Trigger: GGCGACTTCTTTTGAGTTCAAGGGGAAGAAAGAGTC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATG +
Preference number: 5 (lower is better)
Translates to: FVKIPLVSVSHTTENKCIGCTSC*SAMLQM
Trigger: CATCTGTAACATCGCTGACAAGCAAGAGGTACATCC...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ACAGTAAAGGAAACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCCACAGAAGTGCTTTaGGTAGTGGGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: TVKETHESGCSVYSQSLVSTEVL*VVGRSS
Trigger: TGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGA...GACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGTTTCCTTTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGAACCTGATACACTGTTaGTTTACTCTCAACTCTTTG +
Preference number: 5 (lower is better)
Translates to: VPFRKLTSTQQAAFYILENLIHC*FTLNSL
Trigger: CAAAGAGTTGAGAGTAAACAAACAGTGTATCAGGTT...CTCTAAAATGTAGAATGCAGCTTGCTGGGTGCTGGTCAGTTTTCTAAATGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp CAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATCATTATGGTCTTAAATaGTCCTCAGGCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QPFPHQPIEWSFELVSKHHYGLK*SSGSLF
Trigger: GAAAAGGCTGCCTGAGGACAATTTAAGACCATAATG...ATGTTTAGATACCAGTTCAAAAGACCACTCTATGGGTTGATGAGGAAAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp ACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGTTGGTATTTGTGAATTaGATTGCACCACCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TNESIGFKFASNMVLPTLLVFVN*IAPPLF
Trigger: GAAAAGCGGTGGTGCAATCAAATTCACAAATACCAA...CAGCGTTGGTAATACCATGTTTGATGCAAACTTGAACCCAATGCTCTCATTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTTTGAAGTCATTTTCCTaGGCCTTGGAGAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: KFLANGLLAVAQHCGENVLKSFS*ALENFR
Trigger: CCTGAAGTTCTCCAAGGCCAAGGAAAATGACTTCAA...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS-3UTR CAA 90 bp ACTCATGAAAGTGGATGTTCTGTTTATAGTCAGAGTCTTGTCTCTGGTGAACAACCATTGTTCAGGAATTaGTTAAGATCCCCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: THESGCSVYSQSLVSGEQPLFRN*LRSPWC
Trigger: ACACCAAGGGGATCTTAACAAATTCCTGAACAATGG...TTGTTCACCAGAGACAAGACTCTGACTATAAACAGAACATCCACTTTCATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCCCATGTTGGATGTCTaGCTTTGGCATTCAGAATGG +
Preference number: 5 (lower is better)
Translates to: EDDLGNASLYMIVSCCSFPMLDV*LWHSEW
Trigger: CCATTCTGAATGCCAAAGCAAGACATCCAACATGGG...AAAGCTACAGCAGCTAACAATCATGTATAAAGATGCATTTCCTAGATCATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GGTGAACAATCTCAGACAAAAACATGGGTTAAGCTTAGGCTGTGTGTGGATTTTTTTATAGTCAGAGTCTaGTCTCTGGTGAACAATCTC +
Preference number: 5 (lower is better)
Translates to: GEQSQTKTWVKLRLCVDFFIVRV*SLVNNL
Trigger: GAGATTGTTCACCAGAGACAAGACTCTGACTATAAA...AAAATCCACACACAGCCTAAGCTTAACCCATGTTTTTGTCTGAGATTGTTCACC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp GCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACGACTGGATGTGCAGATaGTTCTATGTATTATCAGTA +
Preference number: 5 (lower is better)
Translates to: ARTWHGIKWADVLLFKQYDWMCR*FYVLSV
Trigger: TACTGATAATACATAGAACAATCTGCACATCCAGTC...GTACTGTTTAAATAACAACACATCAGCCCACTTGATTCCATGCCATGTCCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCACAAATGTATCCCTGTaGCATCTGAACTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: FVKIPLVSVSHTTENKCITNVSL*HLNWKT
Trigger: GGTTTTCCAGTTCAGATGCAACAGGGATACATTTGT...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000531849.5
CDS-3UTR CAA 90 bp TTTGTTAAGATCCCCTTGGTGTCAGTTTCTCATACAACAGAGAACAAATGTATCCTGCCTAACTTTTCATaGAAATGTCTAGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: FVKIPLVSVSHTTENKCILPNFS*KCLVGE
Trigger: CTCTCCTACTAGACATTTCAATGAAAAGTTAGGCAG...GATACATTTGTTCTCTGTTGTATGAGAAACTGACACCAAGGGGATCTTAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340360.10
CDS-3UTR CAA 90 bp AAATTTTTAGCTAATGGTCTGTTAGCAGTGGCTCAGCATTGCGGTGAAAATGTTGTACAGAACTCCATATaGAGAAAACACCAACATGAT +
Preference number: 5 (lower is better)
Translates to: KFLANGLLAVAQHCGENVVQNSI*RKHQHD
Trigger: ATCATGTTGGTGTTTTCTCAATATGGAGTTCTGTAC...AACATTTTCACCGCAATGCTGAGCCACTGCTAACAGACCATTAGCTAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS GCA 72 bp GCCTGCCTCCGGCGTCGCTTCAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTCAGGAGGGATGCGCGC +
Preference number: 6 (lower is better)
Translates to: ACLRRRFSLRGV*GGDVPVRRDAR
Trigger: GCGCGCATCCCTCCTGACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCTGAAGCGACGCCGGAGGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS GCA 72 bp CCCTGCCTCCGGCGTCGCTTCAGCCTCCGAGGGGTCTaGGGAGGCGACGTCCCAGTCAGGAGGGATGCGCGC +
Preference number: 6 (lower is better)
Translates to: PCLRRRFSLRGV*GGDVPVRRDAR
Trigger: GCGCGCATCCCTCCTGACTGGGACGTCGCCTCCGCAGACCCCTCGGAGGCTGAAGCGACGCCGGAGGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525407.5
CDS GCA 72 bp CGGTGCCTGCCGCTATCTTCCCCACGCCTTAGTAACTaGGACGCGACGGCAGACAGTGTAGGCGGCAACCGA +
Preference number: 6 (lower is better)
Translates to: RCLPLSSPRLSN*DATADSVGGNR
Trigger: TCGGTTGCCGCCTACACTGTCTGCCGTCGCGTCGCAGTTACTAAGGCGTGGGGAAGATAGCGGCAGGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000527087.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
CDS CAA 90 bp TCCTGTTCTGCGACGGCCAAATTGGGCGGCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACACGGAGGTGTGGCAGAATCCCCAAA +
Preference number: 6 (lower is better)
Translates to: SCSATAKLGGREVRP*PVRSRTRRCGRIPK
Trigger: TTTGGGGATTCTGCCACACCTCCGTGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGAACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CAA 72 bp GCGGGTGATGGAGCACCAGAGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCTCGTGTATGGGCCACC +
Preference number: 6 (lower is better)
Translates to: AGDGAPEAASAP*GFRFSPRVWAT
Trigger: GGTGGCCCATACACGAGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530280.1
CDS CAA 90 bp CTGAGCCCAGCCAGGCTGGCAAAGCAACTGGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: LSPARLAKQLGLESL*SSSISVSSAGNLRM
Trigger: CATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCTGGCTGGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000526047.1
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CAA 90 bp TGGCTTTACCTCCTGAGCCCAGCCAGGCTGGCAAAGCAACTGGGGTaGGAGAGTCTGTTGTCATCCAGCATCAGTGTCTCCAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: WLYLLSPARLAKQLG*ESLLSSSISVSSAG
Trigger: CCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCTGGCTGGGCTCAGGAGGTAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 90 bp TTCTTCAGTCTCCTGAGCCCAGCCAGGCTGGCAAAGCAACTGGGGTaGGAGAGTCTGTTGTCATCCAGCATCAGTGTCTCCAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: FFSLLSPARLAKQLG*ESLLSSSISVSSAG
Trigger: CCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCTGGCTGGGCTCAGGAGACTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000531849.5
ENST00000684022.1
CDS CAA 90 bp TTTTGCGATCTCCTGAGCCCAGCCAGGCTGGCAAAGCAACTGGGGTaGGAGAGTCTGTTGTCATCCAGCATCAGTGTCTCCAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: FCDLLSPARLAKQLG*ESLLSSSISVSSAG
Trigger: CCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCTGGCTGGGCTCAGGAGATCGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530562.5
CDS CAA 90 bp TATTGTTCTGCGACGGCCAAATTGGGCGGCAGGGAGGTAAGGCCATaGCCTGTGAGGAGCAGGACACGGAGGTGTGGCAGAATCCCCAAA +
Preference number: 6 (lower is better)
Translates to: YCSATAKLGGREVRP*PVRSRTRRCGRIPK
Trigger: TTTGGGGATTCTGCCACACCTCCGTGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCTGCCGCCCAATTTGGCCGTCGCAGAACAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533598.5
CDS CCA 72 bp GATCTTGTTGTAGGCCAGGCTAAGGTATCTCAGCTCTaGGAAGGGTGGGGCCAGCGTCTGGTTCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: DLVVGQAKVSQL*EGWGQRLVPGL
Trigger: AAGGCCAGGAACCAGACGCTGGCCCCACCCTTCCCAGAGCTGAGATACCTTAGCCTGGCCTACAACAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340360.10
ENST00000684022.1
CDS CCA 72 bp GTGTGCAGCAGGGCACCTCCTAGAGGGAGTTCTCATTaGTCCTCAGCCCCAGTGCTAACTAGGAAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: VCSRAPPRGSSH*SSAPVLTRKRS
Trigger: GCTCCTCTTCCTAGTTAGCACTGGGGCTGAGGACCAATGAGAACTCCCTCTAGGAGGTGCCCTGCTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp CAGATGCCTCCCATATTAGAAGATGCATGGGAAGGGTaGCCAGGATCCCTGAGCTCTGGCTCCGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: QMPPILEDAWEG*PGSLSSGSGAA
Trigger: AGCAGCACCGGAGCCAGAGCTCAGGGATCCTGGCCACCCTTCCCATGCATCTTCTAATATGGGAGGCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CCA 72 bp CTGGGGATTAGAGGAGGCCCAGCAGAGAAAGGCTTATaGCTTTACCTCCTGAGCCCAGCCAGGCTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LGIRGGPAEKGL*LYLLSPARLAK
Trigger: CTTTGCCAGCCTGGCTGGGCTCAGGAGGTAAAGCCATAAGCCTTTCTCTGCTGGGCCTCCTCTAATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 72 bp GCCAGGCTGGCAAAGCAACTGGGGTTGGAGAGTCTGTaGTCATCCAGCATCAGTGTCTCCAGCGCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: ARLAKQLGLESL*SSSISVSSAGN
Trigger: GTTCCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000526047.1
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CAA 90 bp TCCAGCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACAGATGCCTCCTGTTCTGCGACGGCC +
Preference number: 6 (lower is better)
Translates to: SSISVSSAGNLRMYL*LVSDVTDASCSATA
Trigger: GGCCGTCGCAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS TCA 72 bp CAGGTAAGGCTTCCCATCATCCAGCTTGTAGATTCCTaGGAAGGCCATCTCCCTGCCTCCGGCGTCGCTTCA +
Preference number: 6 (lower is better)
Translates to: QVRLPIIQLVDS*EGHLPASGVAS
Trigger: TGAAGCGACGCCGGAGGCAGGGAGATGGCCTTCTCAGGAATCTACAAGCTGGATGATGGGAAGCCTTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525407.5
CDS GCA 72 bp CTCTGGAGGTGCAAGAGACAAACCACAACAGCCAGGTaGGCCACCTCAAGTCTGGCTCACCCCAATCACATC +
Preference number: 6 (lower is better)
Translates to: LWRCKRQTTTAR*ATSSLAHPNHI
Trigger: GATGTGATTGGGGTGAGCCAGACTTGAGGTGGCGCACCTGGCTGTTGTGGTTTGTCTCTTGCACCTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533990.1
CDS CCA 72 bp GTCCTTGGCCTTCCTCCGGCACGCGAAGCAGATTTCTaGCTGGGAAGCAGTTGTTCAGGTAAGGCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: VLGLPPAREADF*LGSSCSGKASH
Trigger: ATGGGAAGCCTTACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCGTGCCGGAGGAAGGCCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS CCA 72 bp AAGGCCATTGCCTGTGAGGAGCAGGACACGGAGGTGTaGCAGAATCCCCAAATCACAGATGGCCTCCACAGT +
Preference number: 6 (lower is better)
Translates to: KAIACEEQDTEV*QNPQITDGLHS
Trigger: ACTGTGGAGGCCATCTGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTGCTCCTCACAGGCAATGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000684022.1
CDS CAA 72 bp ATAGGCTGCACTCTTCCTGGGGGTGGGAGTCCTGCCTaGGAAGCCCTACCTTCCATGATTCCTTCCGAGACA +
Preference number: 6 (lower is better)
Translates to: IGCTLPGGGSPA*EALPSMIPSET
Trigger: TGTCTCGGAAGGAATCATGGAAGGTAGGGCTTCCAAGGCAGGACTCCCACCCCCAGGAAGAGTGCAGCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS TCA 72 bp GGGACCCCTCGTGTATGGGCCACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGAGATGGGAAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: GTPRVWATRGLL*KTNSQRDGKRA
Trigger: AGCTCTCTTCCCATCTCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGTGGCCCATACACGAGGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000529926.1
ENST00000530562.5
ENST00000531449.5
ENST00000531849.5
ENST00000684022.1
CDS CCA 72 bp TTGGCCTTCCTCCGGCACGCGAAGCAGATTTCTGGCTaGGAAGCAGTTGTTCAGGTAAGGCTTCCCATCATC +
Preference number: 6 (lower is better)
Translates to: LAFLRHAKQISG*EAVVQVRLPII
Trigger: GATGATGGGAAGCCTTACCTGAACAACTGCTTCCCAGCCAGAAATCTGCTTCGCGTGCCGGAGGAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000684022.1
CDS CCA 72 bp GCTCTAGTCTTCTTTGGGGGTGGAATCGGGATTCTCTaGGCCTGGCAGAAGGTCATGGAGGAGGGTGTTATC +
Preference number: 6 (lower is better)
Translates to: ALVFFGGGIGIL*AWQKVMEEGVI
Trigger: GATAACACCCTCCTCCATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp GCGATGTTACAGATGCCTCCCATATTAGAAGATGCATaGGAAGGGTGGCCAGGATCCCTGAGCTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: AMLQMPPILEDA*EGWPGSLSSGS
Trigger: GGAGCCAGAGCTCAGGGATCCTGGCCACCCTTCCCATGCATCTTCTAATATGGGAGGCATCTGTAACATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 90 bp GCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATGCCTCCTGTTCTGCGACGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: ASVSPALGTSGCTSC*SAMLQMPPVLRRPN
Trigger: ATTTGGCCGTCGCAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS TCA 72 bp ACCAAACCCTTGGGCTTCTTCTTGAGGTTACCTTTCTaGACCACTAACCAGTGTCCTTGGCCTGCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: TKPLGFFLRLPF*TTNQCPWPASG
Trigger: GCCGGAGGCAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321448.12
ENST00000531849.5
ENST00000534041.5
ENST00000534798.5
CDS GCA 72 bp GTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAGATGCCTCCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: VSPALGTSGCTS*LSAMLQMPPVL
Trigger: CAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS GCA 72 bp TATAATAGGCTGCACTCTTCCTGGGGGTGGGAGTCCTaGCTTGGAAGCCCTACCTTCCATGATTCCTTCCGA +
Preference number: 6 (lower is better)
Translates to: YNRLHSSWGWES*LGSPTFHDSFR
Trigger: TCGGAAGGAATCATGGAAGGTAGGGCTTCCAAGGCAGGACTCCCACCCCCAGGAAGAGTGCAGCCTATTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS GCA 72 bp GTCAGCGATGTTACAGATGCCTCCCATATTAGAAGATaGATGGGAAGGGTGGCCAGGATCCCTGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VSDVTDASHIRR*MGRVARIPELW
Trigger: CCAGAGCTCAGGGATCCTGGCCACCCTTCCCATGCATCTTCTAATATGGGAGGCATCTGTAACATCGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CCA 72 bp GAGTCTGTTGTCATCCAGCATCAGTGTCTCCAGCGCTaGGAACCTCAGGATGTACCTCTTGCTTGTCAGCGA +
Preference number: 6 (lower is better)
Translates to: ESVVIQHQCLQR*EPQDVPLACQR
Trigger: TCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000526047.1
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CCA 72 bp GTGGAATCGGGATTCTCTGGGCCTGGCAGAAGGTCATaGAGGAGGGTGTTATCCCAGGTTTATGCACAGACT +
Preference number: 6 (lower is better)
Translates to: VESGFSGPGRRS*RRVLSQVYAQT
Trigger: AGTCTGTGCATAAACCTGGGATAACACCCTCCTCCATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp GTCATCCAGAAGTTGGGCTCTAGTCTTCTTTGGGGGTaGAATCGGGATTCTCTGGGCCTGGCAGAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: VIQKLGSSLLWG*NRDSLGLAEGH
Trigger: ATGACCTTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp TGGCTTCCAGAACAGCACTCAGAGTGTGAGCAAGCCTaGGGATTAGAGGAGGCCCAGCAGAGAAAGGCTTAT +
Preference number: 6 (lower is better)
Translates to: WLPEQHSECEQA*GLEEAQQRKAY
Trigger: ATAAGCCTTTCTCTGCTGGGCCTCCTCTAATCCCCAGGCTTGCTCACACTCTGAGTGCTGTTCTGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 72 bp TCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATGCCTCCTGTTCTGCGA +
Preference number: 6 (lower is better)
Translates to: SPALGTSGCTSC*SAMLQMPPVLR
Trigger: TCGCAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CAA 72 bp GCGGGTGATGGAGCACCAGAGGCTGCTTCGGCACCTTaGGGATTTCGCTTTTCACCTCTGAGGTTGAAAATC +
Preference number: 6 (lower is better)
Translates to: AGDGAPEAASAP*GFRFSPLRLKI
Trigger: GATTTTCAACCTCAGAGGTGAAAAGCGAAATCCCAAAGGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS TCA 72 bp AAAGCCTGGTCCAGGATATGTCCAGGAAGGTCCACCTaGTTTTCCCGCCGAGACTCTTTCTTCCCCTTGAAC +
Preference number: 6 (lower is better)
Translates to: KAWSRICPGRST*FSRRDSFFPLN
Trigger: GTTCAAGGGGAAGAAAGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGGACATATCCTGGACCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS TCA 72 bp GGGGTGGGAGTCCTGCCTTGGAAGCCCTACCTTCCATaGTTCCTTCCGAGACATCAAAACATGATGCTTAGG +
Preference number: 6 (lower is better)
Translates to: GVGVLPWKPYLP*FLPRHQNMMLR
Trigger: CCTAAGCATCATGTTTTGATGTCTCGGAAGGAATCATGGAAGGTAGGGCTTCCAAGGCAGGACTCCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS TCA 72 bp TGCTGCTTTGCTTGCTGTGTGACTTCCGGCTGGTGTTaGGCATCTCTGGGCCTAGATCCTCTATTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: CCFACCVTSGWC*ASLGLDPLLFC
Trigger: GCAGAACAATAGAGGATCTAGGCCCAGAGATGCTCAACACCAGCCGGAAGTCACACAGCAAGCAAAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526047.1
ENST00000533598.5
CDS GCA 72 bp AGAAGTCGCCTTCAGGCTTTCCCGACGTTCAGCTTGTaGTCCAACCAAACCCTTGGGCTTCTTCTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: RSRLQAFPTFSL*SNQTLGLLLEV
Trigger: AACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAAAGCCTGAAGGCGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS GCA 72 bp TGCTCATCTGAGTCCTCAAGCATCCTTGGCTTGGACTaGAGCATGAATTGGGGCTCTTTATGGGGACTTCCC +
Preference number: 6 (lower is better)
Translates to: CSSESSSILGLD*SMNWGSLWGLP
Trigger: GGGAAGTCCCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGACTCAGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000528819.1
ENST00000531449.5
ENST00000531849.5
ENST00000684022.1
CDS CCA 72 bp GGAGGGTGTTATCCCAGGTTTATGCACAGACTTCCCTaGCCTAACTTCATACAGTCACAGCAACAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGCYPRFMHRLP*PNFIQSQQQAG
Trigger: CCCAGCCTGTTGCTGTGACTGTATGAAGTTAGGCCAGGGAAGTCTGTGCATAAACCTGGGATAACACCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp GAAGATGTCATCCAGAAGTTGGGCTCTAGTCTTCTTTaGGGGTGGAATCGGGATTCTCTGGGCCTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: EDVIQKLGSSLL*GWNRDSLGLAE
Trigger: TTCTGCCAGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGACATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CAA 72 bp AGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACAGATGCCTCCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SVSSAGNLRMYL*LVSDVTDASCS
Trigger: AGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000684022.1
CDS CAA 90 bp GCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATGCCTCCCATATTAGAAGATGCATGG +
Preference number: 6 (lower is better)
Translates to: ASVSPALGTSGCTSC*SAMLQMPPILEDAW
Trigger: CCATGCATCTTCTAATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 90 bp TCCAGCATCAGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACAGATGCCTCCCATATTAGAAGATGC +
Preference number: 6 (lower is better)
Translates to: SSISVSSAGNLRMYL*LVSDVTDASHIRRC
Trigger: GCATCTTCTAATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACTGATGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS GCA 72 bp CTACAGCCAGGTTGGTTTGCATACATTATAATAGGCTaGACTCTTCCTGGGGGTGGGAGTCCTGCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LQPGWFAYIIIG*TLPGGGSPALE
Trigger: TTCCAAGGCAGGACTCCCACCCCCAGGAAGAGTGCAGCCTATTATAATGTATGCAAACCAACCTGGCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS GCA 72 bp CACTGTGGAGTGAGCAGCTCTACAGCCAGGTTGGTTTaGATACATTATAATAGGCTGCACTCTTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: HCGVSSSTARLV*IHYNRLHSSWG
Trigger: CCCCCAGGAAGAGTGCAGCCTATTATAATGTATGCAAACCAACCTGGCTGTAGAGCTGCTCACTCCACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS GCA 72 bp GTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTaGTTGTCAGCGATGTTACAGATGCCTCCCATATTA +
Preference number: 6 (lower is better)
Translates to: VSPALGTSGCTS*LSAMLQMPPIL
Trigger: TAATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CCA 72 bp GCAATGCTGAACCTAATGGAGAGATTCCAGGCACTGTaGAGTGAGCAGCTCTACAGCCAGGTTGGTTTGCAT +
Preference number: 6 (lower is better)
Translates to: AMLNLMERFQAL*SEQLYSQVGLH
Trigger: ATGCAAACCAACCTGGCTGTAGAGCTGCTCACTCCACAGTGCCTGGAATCTCTCCATTAGGTTCAGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS CAA 72 bp AAAAGAAGTCGCCTTCAGGCTTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTTGGGCTTCTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: KRSRLQAFPTFS*CSNQTLGLLLE
Trigger: CTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAAAGCCTGAAGGCGACTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS CAA 72 bp TCCAGTTGCTCATCTGAGTCCTCAAGCATCCTTGGCTaGGACTGCAGCATGAATTGGGGCTCTTTATGGGGA +
Preference number: 6 (lower is better)
Translates to: SSCSSESSSILG*DCSMNWGSLWG
Trigger: TCCCCATAAAGAGCCCCAATTCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGACTCAGATGAGCAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000528819.1
ENST00000529926.1
ENST00000531449.5
ENST00000531849.5
ENST00000684022.1
CDS CAA 72 bp AGTGTCTCCAGCGCTGGGAACCTCAGGATGTACCTCTaGCTTGTCAGCGATGTTACAGATGCCTCCCATATT +
Preference number: 6 (lower is better)
Translates to: SVSSAGNLRMYL*LVSDVTDASHI
Trigger: AATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS TCA 72 bp GCTGAACCTAATGGAGAGATTCCAGGCACTGTGGAGTaGGCAGCTCTACAGCCAGGTTGGTTTGCATACATT +
Preference number: 6 (lower is better)
Translates to: AEPNGEIPGTVE*AALQPGWFAYI
Trigger: AATGTATGCAAACCAACCTGGCTGTAGAGCTGCTCACTCCACAGTGCCTGGAATCTCTCCATTAGGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS TCA 72 bp TTTTCACCTCGTGTATGGGCCACCAGAGGGTTGTTATaGAAGACGAACTCGCAGAGAGATGGGAAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: FSPRVWATRGLL*KTNSQRDGKRA
Trigger: AGCTCTCTTCCCATCTCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGTGGCCCATACACGAGGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530280.1
CDS GCA 72 bp CAGAAGGTCATGGAGGAGGGTGTTATCCCAGGTTTATaGACAGACTTCCCTGGCCTAACTTCATACAGTCAC +
Preference number: 6 (lower is better)
Translates to: QKVMEEGVIPGL*TDFPGLTSYSH
Trigger: GTGACTGTATGAAGTTAGGCCAGGGAAGTCTGTGCATAAACCTGGGATAACACCCTCCTCCATGACCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CAA 72 bp TCTCCAGCGCTGGGAACCTCAGGATGTACCTCTTGCTaGTCAGCGATGTTACAGATGCCTCCCATATTAGAA +
Preference number: 6 (lower is better)
Translates to: SPALGTSGCTSC*SAMLQMPPILE
Trigger: TTCTAATATGGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGAGGTTCCCAGCGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 90 bp CTTGAACTCAAAAGAAGTCGCCTTCAGGCTTTCCCGACGTTCAGCTaGTGCTCCAACCAAACCCTTGGGCTTCTTCTTGAGGTTACCTTT +
Preference number: 6 (lower is better)
Translates to: LELKRSRLQAFPTFS*CSNQTLGLLLEVTF
Trigger: AAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAAAGCCTGAAGGCGACTTCTTTTGAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS CAA 90 bp TACATTATAATAGGCTGCACTCTTCCTGGGGGTGGGAGTCCTGCCTaGGAAGCCCTACCTTCCATGATTCCTTCCGAGACATCAAAACAT +
Preference number: 6 (lower is better)
Translates to: YIIIGCTLPGGGSPA*EALPSMIPSETSKH
Trigger: ATGTTTTGATGTCTCGGAAGGAATCATGGAAGGTAGGGCTTCCAAGGCAGGACTCCCACCCCCAGGAAGAGTGCAGCCTATTATAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529926.1
CDS TCA 72 bp CAGCTTGTGCTCCAACCAAACCCTTGGGCTTCTTCTTaGGGTTACCTTTCTGAACCACTAACCAGTGTCCTT +
Preference number: 6 (lower is better)
Translates to: QLVLQPNPWASS*GYLSEPLTSVL
Trigger: AAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAAGCCCAAGGGTTTGGTTGGAGCACAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000524430.1
ENST00000525407.5
ENST00000527087.5
ENST00000528219.5
ENST00000529400.5
ENST00000530562.5
ENST00000531849.5
ENST00000531852.5
ENST00000533598.5
ENST00000534041.5
ENST00000534798.5
ENST00000684022.1
CDS TCA 72 bp GAACTTCAGGCCACTCACATTAATGGTGCACAGATCTaGTGGCTTCCTCACACAGTGGTGCTTCAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ELQATHINGAQI*WLPHTVVLQQK
Trigger: TTTCTGCTGAAGCACCACTGTGTGAGGAAGCCATCAGATCTGTGCACCATTAATGTGAGTGGCCTGAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321448.12
ENST00000524430.1
ENST00000525407.5
ENST00000528219.5
ENST00000530562.5
ENST00000531849.5
ENST00000533598.5
ENST00000533990.1
ENST00000534041.5
ENST00000684022.1
CDS TCA 72 bp AAGAGAAACAGAATGAAGGTTGGTGAGACCGCTGATTaGTGCCTAGAGCACCCAGGATATAGGTCTGCCATC +
Preference number: 6 (lower is better)
Translates to: KRNRMKVGETAD*CLEHPGYRSAI
Trigger: GATGGCAGACCTATATCCTGGGTGCTCTAGGCATCAATCAGCGGTCTCACCAACCTTCATTCTGTTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS GCA 72 bp TCTAGAAAGATGGGCACGCTGTCTGAACGCGCATCCTaGTCTCCCCACAATCACAGGAATTACTGCATTTTA +
Preference number: 6 (lower is better)
Translates to: SRKMGTLSERAS*SPHNHRNYCIL
Trigger: TAAAATGCAGTAATTCCTGTGATTGTGGGGAGAGCAGGATGCGCGTTCAGACAGCGTGCCCATCTTTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CAA 90 bp CATGGCATAAATAACTTCTCCTGTGATGAGGGTCTGCAAGGGAGTTaGGGAAAGCTTTGTGCAATGAACAAAGTAGGAATTCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: HGINNFSCDEGLQGS*GKLCAMNKVGIPWG
Trigger: CCCCCAGGGAATTCCTACTTTGTTCATTGCACAAAGCTTTCCCAAACTCCCTTGCAGACCCTCATCACAGGAGAAGTTATTTATGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS TCA 72 bp TTTCATGGGCAGTACAGTATAATCCAGTTGCTCATCTaGGTCCTCAAGCATCCTTGGCTTGGACTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: FHGQYSIIQLLI*VLKHPWLGLQH
Trigger: ATGCTGCAGTCCAAGCCAAGGATGCTTGAGGACTCAGATGAGCAACTGGATTATACTGTACTGCCCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000321448.12
ENST00000340360.10
ENST00000527087.5
ENST00000528819.1
ENST00000529926.1
ENST00000531449.5
ENST00000531849.5
ENST00000684022.1
CDS TCA 72 bp GGATGGGCCATGGTTGCAAGTGTGAGTGCTAAGCAATaGACCCTAGAAAACAACAGCACCTCTAGAAAGATG +
Preference number: 6 (lower is better)
Translates to: GWAMVASVSAKQ*TLENNSTSRKM
Trigger: CATCTTTCTAGAGGTGCTGTTGTTTTCTAGGGTTCATTGCTTAGCACTCACACTTGCAACCATGGCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS TCA 72 bp TTGTGGGCGGTACTCAGGGGCCATTTACACATTCAGTaGGCTGGATGTTTACCCGTTTCTCTTTGTGAACAT +
Preference number: 6 (lower is better)
Translates to: LWAVLRGHLHIQ*AGCLPVSLCEH
Trigger: ATGTTCACAAAGAGAAACGGGTAAACATCCAGCTCACTGAATGTGTAAATGGCCCCTGAGTACCGCCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp TTAAAGCACATAAGCACTTTCGAGCCTCAGAATTACTaGGGAGTCCATACTGAGCAGAAAGCTAACCAACTG +
Preference number: 6 (lower is better)
Translates to: LKHISTFEPQNY*GVHTEQKANQL
Trigger: CAGTTGGTTAGCTTTCTGCTCAGTATGGACTCCCCAGTAATTCTGAGGCTCGAAAGTGCTTATGTGCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2
CDS CCA 72 bp TTTCCTGTCTCTACTGTCAGGGTCCGAATCCTATCTTaGGTAAAATCTCCTCCTGTTTTCCTTTCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: FPVSTVRVRILS*VKSPPVFLSLC
Trigger: GCAAAGAGAAAGGAAAACAGGAGGAGATTTTACCCAAGATAGGATTCGGACCCTGACAGTAGAGACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS TCA 72 bp ATTTTTATGGAGGAGCCAAAGCTCAGAGGGGAGAAATaGCTTACCCATGGCCACACAGTAGAGATAAATTGT +
Preference number: 6 (lower is better)
Translates to: IFMEEPKLRGEK*LTHGHTVEINC
Trigger: ACAATTTATCTCTACTGTGTGGCCATGGGTAAGTCATTTCTCCCCTCTGAGCTTTGGCTCCTCCATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526047.1
CDS CAA 72 bp AATAACTTCTCCTGTGATGAGGGTCTGCAAGGGAGTTaGGGAAAGCTTTGTGCAATGAACAAAGTAGGAATT +
Preference number: 6 (lower is better)
Translates to: NNFSCDEGLQGS*GKLCAMNKVGI
Trigger: AATTCCTACTTTGTTCATTGCACAAAGCTTTCCCAAACTCCCTTGCAGACCCTCATCACAGGAGAAGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431210.2