Pregenerated sensors for XRN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000088930Ensembl transcript IDs: ENST00000377191.5
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATATAGCGGCACACGGCTaGAGGCGGCGGCCGACCGGC | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNIAAHG*RRRPTG Trigger: GCCGGTCGGCCGCCGCCTCCAGCCGTGTGCCGCTAT...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGACGGGTACTTGCGGCTaGGCCAGCGGAAGAACGCCG | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMTGTCG*ASGRTP Trigger: CGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCAGCATCCGGTTCCATaGGAGCAGAGGTTCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMQHPVP*EQRFSP Trigger: GGGGCTGAACCTCTGCTCCCATGGAACCGGATGCTG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCGGTTAAAGCCAAGCTaGGGCTTCCACTGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMRLKPS*GFHCRP Trigger: TGGACGGCAGTGGAAGCCTCAGCTTGGCTTTAACCG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTGTCCTGAAGGCTGCCTaGTCCAGGTGCACAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLVLKAA*SRCTGL Trigger: GAGGCCTGTGCACCTGGATCAGGCAGCCTTCAGGAC...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCATGGCCCAAAGTCCTaGAGGCTGCCTGATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMHGPKS*RLPDPG Trigger: ACCTGGATCAGGCAGCCTTCAGGACTTTGGGCCATG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGAGGGGGTACCTCCACTaGCTCTGTGGAACCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMRGYLH*LCGTCL Trigger: CAGACAGGTTCCACAGAGCCAGTGGAGGTACCCCCT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCACGATCATCTCGTCTaGGTGGATACCCACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNHDHLV*VDTHQA Trigger: GGCCTGGTGGGTATCCACCCAGACGAGATGATCGTG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTCCCTGACTCGCTaGTTCTCGACTGCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNSSLTR*FSTAAS Trigger: GGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACAAAGTCCTGAAGGCTaGCTGATCCAGGTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKQSPEG*LIQVHR Trigger: CCTGTGCACCTGGATCAGGCAGCCTTCAGGACTTTG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGCTGCATTCTGGGTTTaGAGCATCCGGTTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKAAFWV*SIRFHG Trigger: CCCATGGAACCGGATGCTGCAAACCCAGAATGCAGC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACCTCCACTGGCTCTGTaGAACCTGTCTGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKPPLAL*NLSGTA Trigger: AGCTGTACCAGACAGGTTCCACAGAGCCAGTGGAGG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTGCCCTGAACCTCCTTaGACGCTGCTGGTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMCPEPP*TLLVHF Trigger: AAAATGAACCAGCAGCGTTCAAGGAGGTTCAGGGCA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTGGTCTCTTCTGGAGTaGGGTCTGGGTATACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMWSLLE*GLGIPL Trigger: AAGAGGTATACCCAGACCTCACTCCAGAAGAGACCA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGAGTCACAGGTGGTGGTaGAGCATTGCTGTAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMSHRWW*SIAVNA Trigger: GGCATTTACAGCAATGCTGCACCACCACCTGTGACT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCCTCTGTCAAACCTTTaGTGCTGGAAAAGGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMPLSNL*CWKRGG Trigger: TCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGAGG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGTTTGGCTGGAAGGCTaGATTCTGGGTTTGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMVWLEG*ILGLQH Trigger: ATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAAC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTCGCTCATCCACGAATaGCAAGAGAGCAACACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMSLIHE*QESNTL Trigger: CAAGGTGTTGCTCTCTTGCCATTCGTGGATGAGCGA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCCTCGCCAGGAATCCTaGGGCCTCATATTTGACATA | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMPRQES*GLIFDI Trigger: TATGTCAAATATGAGGCCCCAGGATTCCTGGCGAGG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAATGGAAGGCTGCATTCTaGGTTTGCAGCATCCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKWKAAF*VCSIRF Trigger: GAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCA...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTGGTACTGGTTTGGCTaGAAGGCTGCATTCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMWYWFG*KAAFWV Trigger: AACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGCTAGCATCTGGTACTaGTTTGGCTGGAAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKASIWY*FGWKAA Trigger: TGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTGGCCCAGCTAGCATCTaGTACTGGTTTGGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLGPASI*YWFGWK Trigger: CTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCC...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCTTCTTTTGATGCCCTaGACCTCCTTGAACGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNLLLMP*TSLNAA Trigger: AGCAGCGTTCAAGGAGGTTCAGGGCATCAAAAGAAG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACCAATATTTCTTCCCTaGCTCGCTGCTTCTCGACTG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKPIFLP*LAASRL Trigger: CAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACAGCTTCCCATAACCTaGCATTATCCTCTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKQLPIT*HYPLAQ Trigger: CTGAGCCAGAGGATAATGTCAGGTTATGGGAAGCTG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAAATCAGGATCACTCATaGGCTTCCGCCATGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKNQDHS*ASAMME Trigger: CTCCATCATGGCGGAAGCTCATGAGTGATCCTGATT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACCAATTGTATCTTCCTaGGGGTGGTGGCAAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKPIVSS*GWWQRV Trigger: TACCCTTTGCCACCACCCTCAGGAAGATACAATTGG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAATGCTGCTGGCTTTCTTaGTCCTGGAAGCATTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKCCWLS*SWKHYS Trigger: GCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCA...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCCACTGCCGTCCATTaGTGGATTTTTCCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNSTAVH*WIFPSH Trigger: GTGACTGGGAAAAATCCAGCAATGGACGGCAGTGGA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCAGCATTGCTGTAAATaGCAGTTCCTGAGCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMQHCCK*QFLSLL Trigger: CAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGTGGTGGTGCAGCATTaGTGTAAATGCCAGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKVVVQH*CKCQFL Trigger: CAGGAACTGGCATTTACAGCAATGCTGCACCACCAC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCTGTCAAACCTTTGCTaGTGGAAAAGGGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNLSNLC*WKRGGG Trigger: TCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGTAGGCTGGCCATTGTaGGTTCTCTTTCCAAATACT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMVGWPL*VLFPNT Trigger: AGTATTTGGAAAGAGAACTCACAATGGCCAGCCTAC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGAAGTCATGGAGTGGGTaGTGTTTCCCCACAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMKSWSG*CFPTNK Trigger: CTTATTTGTGGGGAAACATCACCCACTCCATGACTT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTATACTCTAGTTTGCTaGGGTTCCAGCTCGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMYTLVC*GSSSSS Trigger: TGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCATTTTAGCACGTGGTaGCACTCCATCTATTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMHFSTW*HSIYCH Trigger: ATGGCAATAGATGGAGTGGCACCACGTGCTAAAATG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGAACCTCCTTGAACGCTaGTGGTTCATTTTAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMNLLER*WFILAR Trigger: ACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATAAACTCTCCTTCTaGACAAGGAAGACTATCGGC | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMDKLSF*TRKTIG Trigger: GCCGATAGTCTTCCTTGTGCAGAAGGAGAGTTTATC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCCTTCAACGTACGACTaGACAACTTTCCGACGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNPSTYD*TTFRRN Trigger: ATTCCGTCGGAAAGTTGTGCAGTCGTACGTTGAAGG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAACTAGGTTTCAGTACTaGTGCTGGCTTTCTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKTRFQY*CWLSCS Trigger: GGAGCAAGAAAGCCAGCAGCAGTACTGAAACCTAGT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACTCCTTGAACGCTGCTaGTTCATTTTAGCACGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKLLERC*FILARG Trigger: ACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAACTTGTCTCGGATTACTaGCTACTTGAGAACCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKLVSDY*LLENLV Trigger: CACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAG...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAATTTCAGTACTGCTGCTaGCTTTCTTGCTCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKFQYCC*LSCSWK Trigger: CTTCCAGGAGCAAGAAAGCCAGCAGCAGTACTGAAA...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGTAAGTCACAGGTGGTaGTGCAGCATTGCTGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMVSHRW*CSIAVN Trigger: ATTTACAGCAATGCTGCACCACCACCTGTGACTTAC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGACCTCATGTCCAAACTaGTTACAAAGACCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMTSCPN*LQRPHG Trigger: ACCATGTGGTCTTTGTAATCAGTTTGGACATGAGGT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAATCTCAACATCAAATGTaGATGGTAGGCTGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKSQHQM*MVGWPL Trigger: CAATGGCCAGCCTACCATTCACATTTGATGTTGAGA...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTTCTAACGATGGCAAATaGGGGAGGAAGTCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLSNDGK*GRKSFP Trigger: GGGAAATGACTTCCTCCCTCATTTGCCATCGTTAGA...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGGTACAGCTCTAAAATaGAGTCATGGAGTGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKGTALK*SHGVGD Trigger: ATCACCCACTCCATGACTTCATTTTAGAGCTGTACC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCTGGGGCCTCATATTTaGCATAAGTTTTGGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMLGPHI*HKFWNL Trigger: CAGATTCCAAAACTTATGTCAAATATGAGGCCCCAG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGACTGTCACTGTCTTCTaGTTTTCGCTTAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMTVTVF*FSLNSS Trigger: GGAGGAATTAAGCGAAAAGCAGAAGACAGTGACAGT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGACCATTGCATTCTTTTaGCTTCTCTTCCACGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMTIAFF*LLFHAV Trigger: AACTGCGTGGAAGAGAAGCCAAAAGAATGCAATGGT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGTTCATTTTAGCACGTaGTGCCACTCCATCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKVHFST*CHSIYC Trigger: GCAATAGATGGAGTGGCACCACGTGCTAAAATGAAC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAACAATGATGAGTATTTaGGTCATGGTTAGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKTMMSI*VMVRLG Trigger: GCCCAGCCTAACCATGACCCAAATACTCATCATTGT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGGAGTGAAAGCTGGTTaGTCTCTCTTCATTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKGVKAG*SLFILF Trigger: AAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCTTGAACCCAAGGCATaGGGAGTTAATATTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNLEPKA*GVNIPL Trigger: TAGTGGAATATTAACTCCTCATGCCTTGGGTTCAAG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR GCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTGCCACTCCATCTATTaGCATGTAGAGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNCHSIY*HVEKSS Trigger: AGAAGACTTCTCTACATGGCAATAGATGGAGTGGCA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGACTAGGAGTGAAAGCTaGTTGATCTCTCTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRFQLEFKPNSCAIKISMTRSES*LISLHS Trigger: AGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATGAGTACAGGGATGGATaGTTCCATTCATATCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNEYRDG*FHSYPN Trigger: ATTTGGATATGAATGGAATCATCCATCCCTGTACTC...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTCACCAACTGCTAACATaGTCATCTGTACTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLHQLLT*SSVLFA Trigger: TGCAAAGAGTACAGATGATCATGTTAGCAGTTGGTG...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAAAACCCAGTCATCAATaGTCCTCTCAACATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKKPSHQ*SSQHQM Trigger: CATTTGATGTTGAGAGGAGCATTGATGACTGGGTTT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTATGGCATGTCTGCAATaGCTTCAAAGTCTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLMACLQ*LQSLKQ Trigger: TTGCTTCAGACTTTGAAGGCATTGCAGACATGCCAT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAAGAGAGCAACACCTTaGCATGCATATTTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLKRATP*HAYFFP Trigger: TGGGAAGAAATATGCATGGCAAGGTGTTGCTCTCTT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCATGAATTCAGTTCCTaGTGTAATACAGTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNHEFSS*CNTVAV Trigger: GACAGCAACTGTATTACACCAGGAACTGAATTCATG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTATTACCACTTGCAGCTaGAAATACCCCCATAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLITTCS*KYPHKL Trigger: CAACTTATGGGGGTATTTCCAGCTGCAAGTGGTAAT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAATGAAGTCATGGAGTaGGTGATGTTTCCCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLNEVME*VMFPHK Trigger: TTTGTGGGGAAACATCACCCACTCCATGACTTCATT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTTCTGTGGAACCTGTCTaGTACAGCTCTAAAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLSVEPV*YSSKMK Trigger: CTTCATTTTAGAGCTGTACCAGACAGGTTCCACAGA...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATAAGTTTTGGAATCTaGGCTTGTCCTCTCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKISFGI*ACPLKS Trigger: GCTTTTGAGAGGACAAGCCCAGATTCCAAAACTTAT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAATGCCTTCAAAGTCTaGAGCAAATGGTGCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLNAFKV*SKWCIM Trigger: CATTATGCACCATTTGCTTCAGACTTTGAAGGCATT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTGGAGAACATACTATTTaGTCTGGAAGAATGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLGEHTI*SGRMAS Trigger: AGAAGCCATTCTTCCAGATCAAATAGTATGTTCTCC...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR GCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAAGAAAGCCACCTTTTaGCAATATTTCTTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLKKATF*QYFFPD Trigger: GTCAGGGAAGAAATATTGGCAAAAGGTGGCTTTCTT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATAAACTCCACATCATTTaGATTAGGTTTACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNKLHII*IRFTGI Trigger: GATGCCAGTAAACCTAATCCAAATGATGTGGAGTTT...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATTACAAAGACCACATaGTTTGGGCTTGTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKITKTT*FGLVWF Trigger: AAACCAAACAAGCCCAAACCATGTGGTCTTTGTAAT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR TCA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAGCATGGATCTTAGATaGTCTAGAATACACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQLEFKPNSCAIKISMDLSMDLR*SRIHCV Trigger: AACACAGTGTATTCTAGATCATCTAAGATCCATGCT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR GCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGAATTTCTCATCAGCTaGATCCACATCAAATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKEFLIS*IHIKFV Trigger: AACAAATTTGATGTGGATGCAGCTGATGAGAAATTC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTTCTTTTATTTCTTCTaGAGGAAGAAAGCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNFFYFF*RKKATF Trigger: AAAGGTGGCTTTCTTCCTCCAGAAGAAATAAAAGAA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAATGGTTTGGGCTTGTTTaGTTTGAATTCTTCTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKWFGLV*FEFFSN Trigger: ATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCA...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CCA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTTTGATCTGGAAGAATaGCTTCTTCATCCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNFDLEE*LLHPKK Trigger: TTTCTTTGGATGAAGAAGCCATTCTTCCAGATCAAA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | GGTGGATACCCACCAGGCCCAGCTAGCATCTGGTACTGGTTTGGCTaGAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTCCATGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGYPPGPASIWYWFG*KAAFWVCSIRFHGS Trigger: GCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | TCTCGTCTGGGTGGATACCCACCAGGCCCAGCTAGCATCTGGTACTaGTTTGGCTGGAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLGGYPPGPASIWY*FGWKAAFWVCSIRF Trigger: GAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACCCAGACGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | GTTTGGCTGGAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTCCATaGGAGCAGAGGTTCAGCCCCAACGCCTCTGTCAAACCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VWLEGCILGLQHPVP*EQRFSPNASVKPLL Trigger: CAGCAAAGGTTTGACAGAGGCGTTGGGGCTGAACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS CCA 90 bp | CGATCATCTCGTCTGGGTGGATACCCACCAGGCCCAGCTAGCATCTaGTACTGGTTTGGCTGGAAGGCTGCATTCTGGGTTTGCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRLGGYPPGPASI*YWFGWKAAFWVCSI Trigger: GATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACCCAGACGAGATGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS GCA 90 bp | GCCTGTATAAGTTTCCCTGGTAAGTCACAGGTGGTGGTGCAGCATTaGTGTAAATGCCAGTTCCTGAGCCTCTTGGCATCACATGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACISFPGKSQVVVQH*CKCQFLSLLASHGP Trigger: TGGGCCATGTGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCACCTGTGACTTACCAGGGAAACTTATACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATGATGGACGGGTACTaGCGGCTGAGCCAGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKMMDGY*RLSQRK Trigger: CTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCAT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS GCA 90 bp | TTCAACGTACGACTGCACAACTTTCCGACGGAATTTCTCATCAGCTaGATCCACATCAAATTTGTTCTTGTAGTACCGCTGCTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FNVRLHNFPTEFLIS*IHIKFVLVVPLLPA Trigger: GGCTGGAAGCAGCGGTACTACAAGAACAAATTTGATGTGGATGCAGCTGATGAGAAATTCCGTCGGAAAGTTGTGCAGTCGTACGTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS TCA 90 bp | GTGGAACCTGTCTGGTACAGCTCTAAAATGAAGTCATGGAGTGGGTaGTGTTTCCCCACAAATAAGACATCACCTCCAAGGCTGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VEPVWYSSKMKSWSG*CFPTNKTSPPRLFL Trigger: AAGAAACAGCCTTGGAGGTGATGTCTTATTTGTGGGGAAACATCACCCACTCCATGACTTCATTTTAGAGCTGTACCAGACAGGTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATGCCTCTGTCAAACCTTaGCTGCTGGAAAAGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNASVKP*LLEKGR Trigger: CCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGAGGC...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTGGCTGCATTCTGGGTTaGCAGCATCCGGTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLGCILG*QHPVPW Trigger: CCATGGAACCGGATGCTGCAAACCCAGAATGCAGCC...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGCATCTGGTACTGGTTaGGCTGGAAGGCTGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMASGTG*AGRLHS Trigger: AGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTTCTCTTCCACGCAGTaGACTATGATGGACGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMFSSTQ*TMMDGY Trigger: GTACCCGTCCATCATAGTCAACTGCGTGGAAGAGAA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTCAGTTCCTGAGCCTCTaGGCATCACATGGCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLQFLSL*ASHGPK Trigger: CTTTGGGCCATGTGATGCCAAGAGGCTCAGGAACTG...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGCATTTCATAGGCTGCTaGTCTCGGATTACTGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMHFIGC*SRITGY Trigger: GTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATG...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTCTGCTGCTGGCTTTCTaGCTCCTGGAAGCATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLLLLAF*LLEALQ Trigger: CTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCAG...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTTCCACTGCCGTCCATaGCTGGATTTTTCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNFHCRP*LDFSQS Trigger: TGACTGGGAAAAATCCAGCAATGGACGGCAGTGGAA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTTTTGGAATCTGGGCTaGTCCTCTCAAAAGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNFWNLG*SSQKRP Trigger: AGGCCGCTTTTGAGAGGACAAGCCCAGATTCCAAAA...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS TCA 90 bp | CATCATGCTTTCCCTTCTTTTCTCTTGGCAAACCTTCACAATCTTTaGCCTCATGTCCAAACTGATTACAAAGACCACATGGTTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHAFPSFLLANLHNL*PHVQTDYKDHMVWA Trigger: AGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATGAGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS TCA 90 bp | GATTTGGGAAAGCTTTACAAAAGCTTAATTCCAATTGTATCTTCCTaGGGGTGGTGGCAAAGGGTATTTCCTTCCTTCTCTGGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: DLGKLYKSLIPIVSS*GWWQRVFPSFSGIS Trigger: GGATATCCCAGAGAAGGAAGGAAATACCCTTTGCCACCACCCTCAGGAAGATACAATTGGAATTAAGCTTTTGTAAAGCTTTCCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 90 bp | ATACTCACGAAGAACATTAAGCCGAAGGAAGATAAACTCTCCTTCTaGACAAGGAAGACTATCGGCAAGTTCATCATGCTTTCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILTKNIKPKEDKLSF*TRKTIGKFIMLSLL Trigger: AAGAAGGGAAAGCATGATGAACTTGCCGATAGTCTTCCTTGTGCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTTCGTGAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGTGCCACTCCATCTATaGCCATGTAGAGAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKVPLHL*PCREVF Trigger: GAAGACTTCTCTACATGGCAATAGATGGAGTGGCAC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGTTAGGCTGGGCTCTTaGCCTTCTAATGTAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMVRLGS*PSNVIH Trigger: ATGGATTACATTAGAAGGCAAAGAGCCCAGCCTAAC...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGAGGAGTGAAAGCTGGTaGATCTCTCTTCATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMRSESW*ISLHSL Trigger: AAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCT...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAACCTGGTGAATTTCTaGAACCCAAGGCATGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLNLVNF*NPRHEE Trigger: CTCCTCATGCCTTGGGTTCAAGAAATTCACCAGGTT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAGTAGAAAATTACCACTaGCAGCTGGAAATACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKVENYH*QLEIPP Trigger: TGGGGGTATTTCCAGCTGCAAGTGGTAATTTTCTAC...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTCAAGAGAGCAACACCTaGCCATGCATATTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLQESNT*PCIFLP Trigger: GGGAAGAAATATGCATGGCAAGGTGTTGCTCTCTTG...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCCACATGGTTTGGGCTaGTTTGGTTTGAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNPHGLG*FGLNSS Trigger: AGAAGAATTCAAACCAAACAAGCCCAAACCATGTGG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATCAAAGACCACATGGTTaGGGCTTGTTTGGTTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNQRPHG*GLFGLN Trigger: ATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTG...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTTCCCTTCTTTTCTCTaGGCAAACCTTCACAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMFPSFL*ANLHNL Trigger: AAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAAATATATACTCTAGTTaGCTGAGGTTCCAGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLRFQLEFKPNSCAIKNIYSS*LRFQLE Trigger: CTCGAGCTGGAACCTCAGCAAACTAGAGTATATATT...TTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS TCA 90 bp | TTTTCTCTTGGCAAACCTTCACAATCTTTGACCTCATGTCCAAACTaGTTACAAAGACCACATGGTTTGGGCTTGTTTGGTTTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLGKPSQSLTSCPN*LQRPHGLGLFGLNS Trigger: AGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATGAGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | ATTATCAAACTCCACATCATTTGGATTAGGTTTACTGGCATCAACTaGAATCTTTACACCATTGCATTCTTTTGGCTTCTCTTCCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: IIKLHIIWIRFTGIN*NLYTIAFFWLLFHA Trigger: TGCGTGGAAGAGAAGCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAACAATATATACTCTAGTTTGCTGAGGTTCCAGCTCGAGTTCAAACCTAATGGAATCTTTACACCATaGCATTCTTTTGGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LNNIYSSLLRFQLEFKPNGIFTP*HSFGFS Trigger: AGAGAAGCCAAAAGAATGCAATGGTGTAAAGATTCC...ATTAGGTTTGAACTCGAGCTGGAACCTCAGCAAACTAGAGTATATATTGTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGTTTCATCTTCATTTTTaGGTGCTGGTTTGTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRFQLEFKPNSCAIKISMFHLHF*VLVCLQ Trigger: CTGAAGACAAACCAGCACCAAAAAATGAAGATGAAA...CATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAACCTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAGGCATTTAGCAAGATaGTCCATGAATTCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLRHLAR*SMNSVP Trigger: AGGAACTGAATTCATGGACAATCTTGCTAAATGCCT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS-3UTR CAA 90 bp | TTCCAGCTCGAGTTCAAACCTAATTCTTGTGCAATAAAAATCAGCATGGATCTTAGGAGAACATACTATTaGATCTGGAAGAATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQLEFKPNSCAIKISMDLRRTYY*IWKNGF Trigger: GAAGCCATTCTTCCAGATCAAATAGTATGTTCTCCT...AAGATCCATGCTGATTTTTATTGCACAAGAATTAGGTTTGAACTCGAGCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | GATTCCATTCATATCCAAATACAGATTATCAAACTCCACATCATTTaGATTAGGTTTACTGGCATCAACTGGAATCTTTACACCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSIHIQIQIIKLHII*IRFTGINWNLYTIA Trigger: TGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAATCTGTATTTGGATATGAATGGAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 90 bp | TTCACAATCTTTGACCTCATGTCCAAACTGATTACAAAGACCACATaGTTTGGGCTTGTTTGGTTTGAATTCTTCTCTAATAATGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FTIFDLMSKLITKTT*FGLVWFEFFSNNGK Trigger: TTTACCATTATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATGAGGTCAAAGATTGTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CAA 72 bp | TTCTCTTCCACGCAGTTGACTATGATGGACGGGTACTaGCGGCTGAGCCAGCGGAAGAACGCCGGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSTQLTMMDGY*RLSQRKNAGTP Trigger: GGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATAGTCAACTGCGTGGAAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CAA 90 bp | TCTTTTGGCTTCTCTTCCACGCAGTTGACTATGATGGACGGGTACTaGCGGCTGAGCCAGCGGAAGAACGCCGGGACTCCCATAGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFGFSSTQLTMMDGY*RLSQRKNAGTPIAA Trigger: TGCCGCTATGGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATAGTCAACTGCGTGGAAGAGAAGCCAAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CAA 90 bp | GTCTGGGTGGATACCCACCAGGCCCAGCTAGCATCTGGTACTGGTTaGGCTGGAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VWVDTHQAQLASGTG*AGRLHSGFAASGSM Trigger: CATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | CCACCAGGCCCAGCTAGCATCTGGTACTGGTTTGGCTaGAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPASIWYWFG*KAAFWVCSIRF Trigger: GAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | GGTGGATACCCACCAGGCCCAGCTAGCATCTGGTACTaGTTTGGCTGGAAGGCTGCATTCTGGGTTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGYPPGPASIWY*FGWKAAFWVCS Trigger: GCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | TGGGATATCCCTGTCTCCCTCCACGATCATCTCGTCTaGGTGGATACCCACCAGGCCCAGCTAGCATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WDIPVSLHDHLV*VDTHQAQLASG Trigger: ACCAGATGCTAGCTGGGCCTGGTGGGTATCCACCCAGACGAGATGATCGTGGAGGGAGACAGGGATATCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS TCA 72 bp | AGGTGCACAGGCCTCCGGTCACGGTTAAAGCCAAGCTaGGGCTTCCACTGCCGTCCATTGCTGGATTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCTGLRSRLKPS*GFHCRPLLDFS Trigger: GGAAAAATCCAGCAATGGACGGCAGTGGAAGCCTCAGCTTGGCTTTAACCGTGACCGGAGGCCTGTGCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | GAAGGCTGCATTCTGGGTTTGCAGCATCCGGTTCCATaGGAGCAGAGGTTCAGCCCCAACGCCTCTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: EGCILGLQHPVP*EQRFSPNASVK Trigger: TTTGACAGAGGCGTTGGGGCTGAACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | AGCATCTGGTACTGGTTTGGCTGGAAGGCTGCATTCTaGGTTTGCAGCATCCGGTTCCATGGGAGCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SIWYWFGWKAAF*VCSIRFHGSRG Trigger: ACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | GGTAAGTCACAGGTGGTGGTGCAGCATTGCTGTAAATaGCAGTTCCTGAGCCTCTTGGCATCACATGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKSQVVVQHCCK*QFLSLLASHGP Trigger: TGGGCCATGTGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCACCTGTGACTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | AGTTTCCCTGGTAAGTCACAGGTGGTGGTGCAGCATTaGTGTAAATGCCAGTTCCTGAGCCTCTTGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SFPGKSQVVVQH*CKCQFLSLLAS Trigger: TGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCACCTGTGACTTACCAGGGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS TCA 72 bp | GAGGAAGAAAGCCACCTTTTGCCAATATTTCTTCCCTaGCTCGCTGCTTCTCGACTGCTGCTTCCATTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EEESHLLPIFLP*LAASRLLLPFL Trigger: AAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTGGCTTTCTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | CCTTCTTTTGATGCCCTGAACCTCCTTGAACGCTGCTaGTTCATTTTAGCACGTGGTGCCACTCCATCTATT | + |
|
Preference number: 6 (lower is better) Translates to: PSFDALNLLERC*FILARGATPSI Trigger: AATAGATGGAGTGGCACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTTCAGGGCATCAAAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | ATTGCTGGATTTTTCCCAGTCACTAGGTTTCAGTACTaGTGCTGGCTTTCTTGCTCCTGGAAGCATTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: IAGFFPVTRFQY*CWLSCSWKHYS Trigger: GCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCAGTACTGAAACCTAGTGACTGGGAAAAATCCAGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | AAGCCACCTTTTGCCAATATTTCTTCCCTGACTCGCTaGTTCTCGACTGCTGCTTCCATTCCTTCTTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KPPFANISSLTR*FSTAASIPSFD Trigger: ATCAAAAGAAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | TATCTAAGAACCCAGCAAAGTCCTTCAACGTACGACTaGACAACTTTCCGACGGAATTTCTCATCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: YLRTQQSPSTYD*TTFRRNFSSAA Trigger: TGCAGCTGATGAGAAATTCCGTCGGAAAGTTGTGCAGTCGTACGTTGAAGGACTTTGCTGGGTTCTTAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS GCA 72 bp | AAGAACATTAAGCCGAAGGAAGATAAACTCTCCTTCTaGACAAGGAAGACTATCGGCAAGTTCATCATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KNIKPKEDKLSF*TRKTIGKFIML Trigger: AAGCATGATGAACTTGCCGATAGTCTTCCTTGTGCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CAA 72 bp | TTAGGTTTACTGGCATCAACTGGAATCTTTACACCATaGCATTCTTTTGGCTTCTCTTCCACGCAGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LGLLASTGIFTP*HSFGFSSTQLT Trigger: AGTCAACTGCGTGGAAGAGAAGCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | CTCCACATCATTTGGATTAGGTTTACTGGCATCAACTaGAATCTTTACACCATTGCATTCTTTTGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHIIWIRFTGIN*NLYTIAFFWLL Trigger: GAGAAGCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | TTTGACCTCATGTCCAAACTGATTACAAAGACCACATaGTTTGGGCTTGTTTGGTTTGAATTCTTCTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FDLMSKLITKTT*FGLVWFEFFSN Trigger: ATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATGAGGTCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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| CDS CCA 72 bp | CATATCCAAATACAGATTATCAAACTCCACATCATTTaGATTAGGTTTACTGGCATCAACTGGAATCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: HIQIQIIKLHII*IRFTGINWNLY Trigger: GTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATAATCTGTATTTGGATATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377191.5 |
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