RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XRCC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000079246

Ensembl transcript IDs: ENST00000392132.7, ENST00000392133.7, ENST00000417391.1, ENST00000429133.5, ENST00000451695.5, ENST00000460284.5, ENST00000471649.1, ENST00000476360.1, ENST00000485763.1, ENST00000493706.1

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCCTAACCCAGCTGCTTGTTGGGAGGAAGCAAATGCTACTGCTTaGTCAACACAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGA +
Preference number: 1 (lower is better)
Translates to: FPNPAACWEEANATA*STQVVTAVGGSGKG
Trigger: TCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCTTCCTCCCAACAAGCAGCTGGGTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 90 bp GGAAGCAAATGCTACTGCTTGCTCAACACAAGTTGTGACAGCTGTTaGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAGAAACTC +
Preference number: 1 (lower is better)
Translates to: GSKCYCLLNTSCDSC*RIRQRRTLERVKKL
Trigger: GAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 90 bp ACACAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCATCAATAACCATGCCATGGTTCCAC +
Preference number: 1 (lower is better)
Translates to: TQVVTAVGGSGKGGL*KGLRNSSITMPWFH
Trigger: GTGGAACCATGGCATGGTTATTGATGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 90 bp TGTGTATTAGTGACGACTTATGAGGGTGCTGAAGACAGAGGTGACTaGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAAG +
Preference number: 1 (lower is better)
Translates to: CVLVTTYEGAEDRGD*VPRSLYTKEELELK
Trigger: CTTGAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCGTCACTAATACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAGATTTTGGCTCCCCTTaGATGGCCGCATCCAACTTG +
Preference number: 2 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLDFGSP*MAASNL
Trigger: CAAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATC...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGCTCAACACAAGTTGTaGCAGCTGTTGGAGGATCAG +
Preference number: 2 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWAQHKL*QLLEDQ
Trigger: CTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAGTTGTGACAGCTGTTaGAGGATCAGGCAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTSCDSC*RIRQRR
Trigger: CCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGGATTTTGGCTCCCCTTaGATGGCCGCATCCAACTTG +
Preference number: 2 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVDFGSP*MAASNL
Trigger: CAAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATC...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR GCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACGCCTCCAGGTAACCTaGTGGGAATTTCTTGAGATT +
Preference number: 2 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLRLQVT*WEFLEI
Trigger: AATCTCAAGAAATTCCCAGCAGGTTACCTGGAGGCG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR GCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTATGAAGGGAAATTGTaGTCCCCTTCCCACCCCACT +
Preference number: 2 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNYEGKL*SPSHPT
Trigger: AGTGGGGTGGGAAGGGGAGCACAATTTCCCTTCATA...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTATTGGCTCCCCTTGAATaGCCGCATCCAACTTGTTTT +
Preference number: 2 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLLAPLE*PHPTCF
Trigger: AAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAA...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAACCCAGCTGCTTGTTaGGAGGAAGCAAATGCTACT +
Preference number: 2 (lower is better)
Translates to: DRGDWVPRSLYTKEELELNPAAC*EEANAT
Trigger: AGTAGCATTTGCTTCCTCCCAACAAGCAGCTGGGTT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGTGCCATGGTTCCACATaGGACACTAATCACATCACA +
Preference number: 2 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWCHGST*DTNHIT
Trigger: TGTGATGTGATTAGTGTCTCATGTGGAACCATGGCA...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp GAATCACATCCATGCTCACGATTAGTGCATCCAGGAAGTCAGCCTGTTGAGAACGATGTCTGTGCACTGTaGTGTTCTGATACTGATCCC +
Preference number: 2 (lower is better)
Translates to: ESHPCSRLVHPGSQPVENDVCAL*CSDTDP
Trigger: GGGATCAGTATCAGAACATCACAGTGCACAGACATC...GTTCTCAACAGGCTGACTTCCTGGATGCACTAATCGTGAGCATGGATGTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR GCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCACGCCTCCAGGTAACCTaGTGGGAATTTCTTGAGATT +
Preference number: 2 (lower is better)
Translates to: HAMVPHETLITSQGLQLSRLQVT*WEFLEI
Trigger: AATCTCAAGAAATTCCCAGCAGGTTACCTGGAGGCG...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: DRGDWVPRSLYTKEELELGKGGL*KGLRNS
Trigger: TGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAGTTGTGACAGCTGTTaGAGGATCAGGCAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RDWAKRSFLHETTTITHCSCDSC*RIRQRR
Trigger: CCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGGCTGCAACTGTCACTaGTATACTAGGTCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTGCNCH*YTRSRK
Trigger: TTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAAGGTCTTTTCTTCATaGGACCACCACCATAACTCA +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTKVFSS*DHHHNS
Trigger: TGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGAAACTTTCTCTCTTTaGGGCTTGCAAGTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTETFSL*GLQVEN
Trigger: GTTCTCTACTTGCAAGCCTCAAAGAGAGAAAGTTTC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGCAAATGCTACTGCTTaGTCAACACAAGTTGTGACA +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTANATA*STQVVT
Trigger: TGTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGGAAGCAAATGCTACTaGTTGCTCAACACAAGTTGT +
Preference number: 2 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTGSKCY*LLNTSC
Trigger: ACAACTTGTGTTGAGCAAGCAGTAGCATTTGCTTCC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAATTTCTTGAGATTTTaGCTCCCCTTGAATGGCCGC +
Preference number: 2 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNNFLRF*LPLNGR
Trigger: GCGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGTGCCATGGTTCCACATaGGACACTAATCACATCACA +
Preference number: 2 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVCHGST*DTNHIT
Trigger: TGTGATGTGATTAGTGTCTCATGTGGAACCATGGCA...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR TCA 90 bp CAGCTGACTTTTGCTGAATCGGCTGCTGAGGTCAGTGAATATTTCAATATGCCTAGGAAGTCAGCCTGTTaGGAACCTGGTTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: QLTFAESAAEVSEYFNMPRKSAC*EPGWIL
Trigger: CAAAATCCAACCAGGTTCTCAACAGGCTGACTTCCT...AGGCATATTGAAATATTCACTGACCTCAGCAGCCGATTCAGCAAAAGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR GCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGTTGGGAGGAAGCAAATaGTACTGCTTGCTCAACACA +
Preference number: 2 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVLGGSK*YCLLNT
Trigger: TGTGTTGAGCAAGCAGTAGCATTTGCTTCCTCCCAA...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGAATTTCTTGAGATTTTaGCTCCCCTTGAATGGCCGC +
Preference number: 2 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVNFLRF*LPLNGR
Trigger: GCGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATT...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCTCCAGGTAACCTGCTaGGAATTTCTTGAGATTTTG +
Preference number: 2 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNLQVTC*EFLEIL
Trigger: CAAAATCTCAAGAAATTCCCAGCAGGTTACCTGGAG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: RDWAKRSFLHETTTITHCGKGGL*KGLRNS
Trigger: TGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCATTGGCTCCCCTTGAATaGCCGCATCCAACTTGTTTT +
Preference number: 2 (lower is better)
Translates to: TRAATVTDILGQEKIYFPLAPLE*PHPTCF
Trigger: AAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAA...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR GCA 90 bp TTTCTTCAAGCTATGAATTATAATATCCAGCTGACTTTTGCTGAATCGGCTGCTGTTGAATCACATCCATaGTCACGATTAGTGCATCCA +
Preference number: 2 (lower is better)
Translates to: FLQAMNYNIQLTFAESAAVESHP*SRLVHP
Trigger: TGGATGCACTAATCGTGAGCATGGATGTGATTCAAC...AGCAGCCGATTCAGCAAAAGTCAGCTGGATATTATAATTCATAGCTTGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGAGTATGAAGGGAAATaGTGCTCCCCTTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWEYEGK*CSPSHP
Trigger: GGGGTGGGAAGGGGAGCACAATTTCCCTTCATACTC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAGATTTTGGCTCCCCTaGAATGGCCGCATCCAACTT +
Preference number: 3 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLRFWLP*NGRIQL
Trigger: AAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATCT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCCTGCTGGGAATTTCTaGAGATTTTGGCTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWPAGNF*RFWLPL
Trigger: CAAGGGGAGCCAAAATCTCAAGAAATTCCCAGCAGG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 72 bp TGCTACTGCTTGCTCAACACAAGTTGTGACAGCTGTTaGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTT +
Preference number: 3 (lower is better)
Translates to: CYCLLNTSCDSC*RIRQRRTLERV
Trigger: AACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGCAAGCAGTAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 72 bp GTGACGACTTATGAGGGTGCTGAAGACAGAGGTGACTaGGTACCAAGAAGTCTGTACACCAAAGAGGAACTG +
Preference number: 3 (lower is better)
Translates to: VTTYEGAEDRGD*VPRSLYTKEEL
Trigger: CAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR TCA 72 bp AGGAAGCAAATGCTACTGCTTGCTCAACACAAGTTGTaGCAGCTGTTGGAGGATCAGGCAAAGGAGGACTCT +
Preference number: 3 (lower is better)
Translates to: RKQMLLLAQHKL*QLLEDQAKEDS
Trigger: AGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGAGATTTTGGCTCCCCTaGAATGGCCGCATCCAACTT +
Preference number: 3 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVRFWLP*NGRIQL
Trigger: AAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATCT...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACGAATTTCTTGAGATTTaGGCTCCCCTTGAATGGCCG +
Preference number: 3 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNEFLEI*APLEWP
Trigger: CGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATTC...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCCTGCTGGGAATTTCTaGAGATTTTGGCTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVPAGNF*RFWLPL
Trigger: CAAGGGGAGCCAAAATCTCAAGAAATTCCCAGCAGG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAGCAAATGCTACTGCTaGCTCAACACAAGTTGTGAC +
Preference number: 3 (lower is better)
Translates to: DRGDWVPRSLYTKEELELSKCYC*LNTSCD
Trigger: GTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCGAAACTTTCTCTCTTaGAGGCTTGCAAGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWRNFLS*RLASRE
Trigger: TTCTCTACTTGCAAGCCTCAAAGAGAGAAAGTTTCG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CCA 72 bp GTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCATCAATAACCATGCCA +
Preference number: 3 (lower is better)
Translates to: VTAVGGSGKGGL*KGLRNSSITMP
Trigger: TGGCATGGTTATTGATGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCGCATCCAACTTGTTTaGTTAGAACTCCCAGCATCA +
Preference number: 3 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVRIQLV*LELPAS
Trigger: TGATGCTGGGAGTTCTAACAAAACAAGTTGGATGCG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAGCAAATGCTACTGCTaGCTCAACACAAGTTGTGAC +
Preference number: 3 (lower is better)
Translates to: RDWAKRSFLHETTTITHCSKCYC*LNTSCD
Trigger: GTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR-3UTR CAA 90 bp TTTGCTGAATCGGCTGCTGAGGTCAGTGAATATTTCAATATGCCTCTTCTCAAACCACCAGAAAGGGGATaGTCAGTGCCATCTGTACCA +
Preference number: 3 (lower is better)
Translates to: FAESAAEVSEYFNMPLLKPPERG*SVPSVP
Trigger: TGGTACAGATGGCACTGACAATCCCCTTTCTGGTGG...TTTGAGAAGAGGCATATTGAAATATTCACTGACCTCAGCAGCCGATTCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR CAA 90 bp CAAGCTATGAATTATAATATCCAGCTGACTTTTGCTGAATCGGCTGCTGAGGTCGAACCTGGTTGGATTTaGCTTTCAATGTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: QAMNYNIQLTFAESAAEVEPGWI*LSMSSS
Trigger: GCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTC...GACCTCAGCAGCCGATTCAGCAAAAGTCAGCTGGATATTATAATTCATAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR CAA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACGCATCCAACTTGTTTaGTTAGAACTCCCAGCATCA +
Preference number: 3 (lower is better)
Translates to: TRAATVTDILGQEKIYFPRIQLV*LELPAS
Trigger: TGATGCTGGGAGTTCTAACAAAACAAGTTGGATGCG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR GCA 72 bp ACTTCTTTCCTATTGTTTCATGTTGAATCACATCCATaGTCACGATTAGTGCATCCAGGAAGTCAGCCTGTT +
Preference number: 3 (lower is better)
Translates to: TSFLLFHVESHP*SRLVHPGSQPV
Trigger: AACAGGCTGACTTCCTGGATGCACTAATCGTGAGCATGGATGTGATTCAACATGAAACAATAGGAAAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR CAA 90 bp CAAGCTATGAATTATAATATCCAGCTGACTTTTGCTGAATCGGCTGCTGAGGTCTCCTATTGTTTCATGTaGAATCACATCCATGCTCAC +
Preference number: 3 (lower is better)
Translates to: QAMNYNIQLTFAESAAEVSYCFM*NHIHAH
Trigger: GTGAGCATGGATGTGATTCAACATGAAACAATAGGA...GACCTCAGCAGCCGATTCAGCAAAAGTCAGCTGGATATTATAATTCATAGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
3UTR-3UTR CAA 90 bp AATCGGCTGCTGAGGTCAGTGAATATTTCAATATGCCTCTTCTCAAACTTCTTTCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTC +
Preference number: 3 (lower is better)
Translates to: NRLLRSVNISICLFSNFFLLRTW*DFAFNV
Trigger: GACATTGAAAGCAAAATCCAACCAGGTTCTCAACAG...AAAGAAGTTTGAGAAGAGGCATATTGAAATATTCACTGACCTCAGCAGCCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGGTCCTCAGGCGCTTTaGTCGCTTCTTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELGPQAL*SLLPGG
Trigger: CCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCCAGACTGGAGACGCTaGAGTGGGCTCCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWPDWRR*SGLPLA
Trigger: AGCAAGGGGGAGCCCACTTCAGCGTCTCCAGTCTGG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCCCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELPTAPC*RSSGAL
Trigger: CAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGG...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCCAGACTGGAGACGCTaGAGTGGGCTCCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNPDWRR*SGLPLA
Trigger: AGCAAGGGGGAGCCCACTTCAGCGTCTCCAGTCTGG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCGTGCCCCGGAACTCTaGGCATGCGCAGATTCCCGC +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVRAPEL*ACADSR
Trigger: GCGGGAATCTGCGCATGCTCAGAGTTCCGGGGCACG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGGGGCGGGGAAACCGTaGCCCGGAACTCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCGAGKP*PGTLSM
Trigger: CATGCTCAGAGTTCCGGGGCACGGTTTCCCCGCCCC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGGGTCCTCAGGCGCTTTaGTCGCTTCTTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVGPQAL*SLLPGG
Trigger: CCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACC...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACTGGAGACGCTGAAGTaGGCTCCCCCTTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTLETLK*APPCSV
Trigger: GACTGAGCAAGGGGGAGCCCACTTCAGCGTCTCCAG...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTATTCCGGGCGGGAACCTaGCGTGTCGCAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLFRAGT*RVATRF
Trigger: GAAGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAA...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCTTCCGGGCGGGAACCTaGCGTGTCGCAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCFRAGT*RVATRF
Trigger: GAAGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAA...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLPTAPC*RSSGAL
Trigger: CAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGATTCCGGCCGAGCATaGGCAGATTCTCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTDSGRA*ADSLRA
Trigger: TGCTCGGAGAGAATCTGCGCATGCTCGGCCGGAATC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGGAAAGGAAGGCCCATaGCCACCTAAGCGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTGKEGP*PPKRKG
Trigger: CCCCTTTCGCTTAGGTGGCCATGGGCCTTCCTTTCC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAGGAAAGGAAGGCCCATaGCCACCTAAGCGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLGKEGP*PPKRKG
Trigger: CCCCTTTCGCTTAGGTGGCCATGGGCCTTCCTTTCC...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCTGGAGACGCTGAAGTaGGCTCCCCCTTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNLETLK*APPCSV
Trigger: GACTGAGCAAGGGGGAGCCCACTTCAGCGTCTCCAG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAGCCGCAAGTCTTCCATaGAAGGCAGCTGCACATACA +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLAASLP*KAAAHT
Trigger: TGTATGTGCAGCTGCCTTTCATGGAAGACTTGCGGC...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACATGGCTTCCTCAGCTGTaGCAGAACTTCCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTWLPQL*QNFQRL
Trigger: AAGCCTCTGGAAGTTCTGTCACAGCTGAGGAAGCCA...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGTAGTCGGGAGCGTGTaGTGTTTGAGCCGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSVVGSV*CLSRLK
Trigger: TTTCAGGCGGCTCAAACACCACACGCTCCCGACTAC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
3UTR CAA 72 bp TTTTGGCTCCCCTTGAATGGCCGCATCCAACTTGTTTaGTTAGAACTCCCAGCATCACAGCGATGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FWLPLNGRIQLV*LELPASQRWQL
Trigger: GAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACGCCGCAAGTCTTCCATaGAAGGCAGCTGCACATACA +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNAASLP*KAAAHT
Trigger: TGTATGTGCAGCTGCCTTTCATGGAAGACTTGCGGC...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTATTCCAAATATGCTGCTaGATTGGGGGTAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLFQICC*IGGRGS
Trigger: GGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAA...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCACTTCCAACAGAGGTaGCACTGCCTTCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVHFQQR*HCLQPD
Trigger: GTCTGGCTGAAGGCAGTGTCACCTCTGTTGGAAGTG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAAGTGCAACTGCAGCTaGCTCATCATCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTKCNCS*LIISCC
Trigger: GCAGCAAGAGATGATGAGGCAGCTGCAGTTGCACTT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGATTCCCGCCGAGCATaGGCACATTCTCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCDSRRA*AHSLHS
Trigger: GGAATGGAGAGAATGTGCGCATGCTCGGCGGGAATC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACACAAATTGGAGCCAATaGTCAGTCGGCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNTNWSQ*SVGRAS
Trigger: ACTGGCCCTGCCGACTGACCATTGGCTCCAATTTGT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATGCTGTGTCTCCACTTaGTTTGTCTTTGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSCCVST*FVFGGQ
Trigger: CTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
3UTR CAA 72 bp CGCCTCCAGGTAACCTGCTGGGAATTTCTTGAGATTTaGGCTCCCCTTGAATGGCCGCATCCAACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RLQVTCWEFLEI*APLEWPHPTCF
Trigger: AAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATTCCCAGCAGGTTACCTGGAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGATGTCTGTGCACTGTaGTGTTCTGATACTGATCCC +
Preference number: 4 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWDVCAL*CSDTDP
Trigger: GGGATCAGTATCAGAACATCACAGTGCACAGACATC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CACTGTGATGTTCTGATACTGATCCCCACCAGAAAGGGGATTGTCAGTGCCATCGATGTCTGTGCACTGTaGTGTTCTGATACTGATCCC +
Preference number: 4 (lower is better)
Translates to: HCDVLILIPTRKGIVSAIDVCAL*CSDTDP
Trigger: GGGATCAGTATCAGAACATCACAGTGCACAGACATC...GATGGCACTGACAATCCCCTTTCTGGTGGGGATCAGTATCAGAACATCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR TCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAGGAAGTCAGCCTGTTaGGAACCTGGTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELRKSAC*EPGWIL
Trigger: CAAAATCCAACCAGGTTCTCAACAGGCTGACTTCCT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAGTCGGCAGGGCCAGTaGATGGAATGCCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLSRQGQ*MECLSI
Trigger: AATTGAGAGGCATTCCATTCACTGGCCCTGCCGACT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAAAGCCACGCCGACTTaGGGATTAGCTCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTKATPT*GLALLS
Trigger: TGACAAAAGAGCTAATCCTCAAGTCGGCGTGGCTTT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAAAGCCACGCCGACTTaGGGATTAGCTCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLKATPT*GLALLS
Trigger: TGACAAAAGAGCTAATCCTCAAGTCGGCGTGGCTTT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCTGGCTTCCTCAGCTGTaGCAGAACTTCCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCWLPQL*QNFQRL
Trigger: AAGCCTCTGGAAGTTCTGTCACAGCTGAGGAAGCCA...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGATTTTGGCTCCCCTTaGATGGCCGCATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLDFGSP*MAASNL
Trigger: CAAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAAGTGCAACTGCAGCTaGCTCATCATCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNKCNCS*LIISCC
Trigger: GCAGCAAGAGATGATGAGGCAGCTGCAGTTGCACTT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAATCAGGGAGGAAAGTaGAACTGCAGCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNNQGGK*NCSCLI
Trigger: GATGAGGCAGCTGCAGTTGCACTTTCCTCCCTGATT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGACAAATTGGAGCCAATaGTCAGTCGGCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVTNWSQ*SVGRAS
Trigger: ACTGGCCCTGCCGACTGACCATTGGCTCCAATTTGT...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTTGGCTCCCCTTGAATaGCCGCATCCAACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELLAPLE*PHPTCF
Trigger: AAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACATTGGCTCCCCTTGAATaGCCGCATCCAACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTLAPLE*PHPTCF
Trigger: AAAACAAGTTGGATGCGGCCATTCAAGGGGAGCCAA...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAACCCAGCTGCTTGTTaGGAGGAAGCAAATGCTACT +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLNPAAC*EEANAT
Trigger: AGTAGCATTTGCTTCCTCCCAACAAGCAGCTGGGTT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAGAAGACAGAGGTGACTaGGTACCAAGAAGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTEDRGD*VPRSLY
Trigger: GTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTC...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAAGGAAGTCAGCCTGTTaGGAACCTGGTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSRKSAC*EPGWIL
Trigger: CAAAATCCAACCAGGTTCTCAACAGGCTGACTTCCT...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTATTCCAAATATGCTGCTaGATTGGGGGTAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLFQICC*IGGRGS
Trigger: GGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAA...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAGTTCGATGTGATTTATaGGCTGGTTACTCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLVRCDL*AGYSLP
Trigger: AGGAAGCGAGTAACCAGCTCATAAATCACATCGAAC...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTGCCATGGTTCCACATaGGACACTAATCACATCACA +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELCHGST*DTNHIT
Trigger: TGTGATGTGATTAGTGTCTCATGTGGAACCATGGCA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGCTCAACACAAGTTGTaGCAGCTGTTGGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCAQHKL*QLLEDQ
Trigger: CTGATCCTCCAACAGCTGTCACAACTTGTGTTGAGC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGGGAGGAAAGTGCAACTaGAGCTGCCTCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVGGKCN*SCLIIS
Trigger: AGAGATGATGAGGCAGCTGCAGTTGCACTTTCCTCC...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGGAGGAAAGTGCAACTaGAGCTGCCTCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLGGKCN*SCLIIS
Trigger: AGAGATGATGAGGCAGCTGCAGTTGCACTTTCCTCC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAATCAGGGAGGAAAGTaGAACTGCAGCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLNQGGK*NCSCLI
Trigger: GATGAGGCAGCTGCAGTTGCACTTTCCTCCCTGATT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTATATGAAGGGAAATTGTaGTCCCCTTCCCACCCCACT +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLYEGKL*SPSHPT
Trigger: AGTGGGGTGGGAAGGGGAGCACAATTTCCCTTCATA...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGTATGAAGGGAAATTGTaGTCCCCTTCCCACCCCACT +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVYEGKL*SPSHPT
Trigger: AGTGGGGTGGGAAGGGGAGCACAATTTCCCTTCATA...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTATCAACTGTGCCTCGGTaGGAGCATATTTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLSTVPR*EHISYC
Trigger: ACAGTAAGAAATATGCTCCCACCGAGGCACAGTTGA...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACACTTGGTTTGTCTTTaGGGGCCAGAAACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLHLVCL*GPETFW
Trigger: CCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWGKGGL*KGLRNS
Trigger: TGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGAGTTGTGACAGCTGTTaGAGGATCAGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVSCDSC*RIRQRR
Trigger: CCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACT...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAACCCAGCTGCTTGTTaGGAGGAAGCAAATGCTACT +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNNPAAC*EEANAT
Trigger: AGTAGCATTTGCTTCCTCCCAACAAGCAGCTGGGTT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACGAAGACAGAGGTGACTaGGTACCAAGAAGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNEDRGD*VPRSLY
Trigger: GTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTC...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGATGTCTGTGCACTGTaGTGTTCTGATACTGATCCC +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCDVCAL*CSDTDP
Trigger: GGGATCAGTATCAGAACATCACAGTGCACAGACATC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCTATTGTTTCATGTTaGATCACATCCATGCTCACG +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTPIVSC*ITSMLT
Trigger: CGTGAGCATGGATGTGATTCAACATGAAACAATAGG...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACACTTCCAACAGAGGTaGCACTGCCTTCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPHFQQR*HCLQPD
Trigger: GTCTGGCTGAAGGCAGTGTCACCTCTGTTGGAAGTG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTTTCTAAAGGTTCACTaGTATGGCAGAGATTGGGCC +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNFLKVH*YGRDWA
Trigger: GGCCCAATCTCTGCCATATCAGTGAACCTTTAGAAA...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCCGCCTCCAGGTAACCTaGTGGGAATTTCTTGAGATT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCRLQVT*WEFLEI
Trigger: AATCTCAAGAAATTCCCAGCAGGTTACCTGGAGGCG...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGCAAATGCTACTGCTTaGTCAACACAAGTTGTGACA +
Preference number: 4 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWANATA*STQVVT
Trigger: TGTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGGCAGGGCCAGTGAATaGAATGCCTCTCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLGRASE*NASQFS
Trigger: AGAAAATTGAGAGGCATTCCATTCACTGGCCCTGCC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGGCAGGGCCAGTGAATaGAATGCCTCTCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCGRASE*NASQFS
Trigger: AGAAAATTGAGAGGCATTCCATTCACTGGCCCTGCC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTGGGATTTTGGTGGTTaGAAACAAGTCTTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELWDFGG*KQVFKG
Trigger: ACCCTTGAAGACTTGTTTCCAACCACCAAAATCCCA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCACACTTGGTTTGTCTTTaGGGGCCAGAAACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSHLVCL*GPETFW
Trigger: CCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTG...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACTCCAGGTAACCTGCTaGGAATTTCTTGAGATTTTG +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLLQVTC*EFLEIL
Trigger: CAAAATCTCAAGAAATTCCCAGCAGGTTACCTGGAG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACGGCAAAGGAGGACTCTaGAAAGGGTTAAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNGKGGL*KGLRNS
Trigger: TGAGTTTCTTAACCCTTTCCAGAGTCCTCCTTTGCC...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAATTATAATATCCAGCTaGCTTTTGCTGAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLIIISS*LLLNRL
Trigger: CAGCCGATTCAGCAAAAGTCAGCTGGATATTATAAT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCATTATAATATCCAGCTaGCTTTTGCTGAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELIIISS*LLLNRL
Trigger: CAGCCGATTCAGCAAAAGTCAGCTGGATATTATAAT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGCCTCTCAATTTTCTTaGAGACGCACAGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSASQFS*RRTVFS
Trigger: TGAGAAAACTGTGCGTCTTCAAGAAAATTGAGAGGC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAAGTCGGCAGGGCCAGTaGATGGAATGCCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPSRQGQ*MECLSI
Trigger: AATTGAGAGGCATTCCATTCACTGGCCCTGCCGACT...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAATTTCCACTTTCTCTTaGAGGGCTTTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSISTFS*RAFRKL
Trigger: CAACTTCCTGAAAGCCCTTCAAGAGAAAGTGGAAAT...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGGCTGCAACTGTCACTaGTATACTAGGTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSGCNCH*YTRSRK
Trigger: TTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTATGCCATGGTTCCACATaGGACACTAATCACATCACA +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLCHGST*DTNHIT
Trigger: TGTGATGTGATTAGTGTCTCATGTGGAACCATGGCA...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAAAGGTCTTTTCTTCATaGGACCACCACCATAACTCA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSKVFSS*DHHHNS
Trigger: TGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTT...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGGTTATCACCTTCTTTaGTTGTTCAAATGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWGYHLL*LFKWGF
Trigger: GAATCCCCATTTGAACAAGCAAAGAAGGTGATAACC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp GAATCACATCCATGCTCACGATTAGTGCATCCAGGAAGTCAGCCTGTTGAGAACGTTGAATCACATCCATaGTCACGATTAGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ESHPCSRLVHPGSQPVENVESHP*SRLVHP
Trigger: TGGATGCACTAATCGTGAGCATGGATGTGATTCAAC...GTTCTCAACAGGCTGACTTCCTGGATGCACTAATCGTGAGCATGGATGTGATTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACACTTCCATCTTCCTTaGCAAGTGAGAAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLHFHLP*QVRKAR
Trigger: TCTTGCCTTTCTCACTTGGCAAGGAAGATGGAAGTG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATCCATGAAAGGCAGCTaGACATACACTAAACACTCA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSSMKGS*TYTKHS
Trigger: TGAGTGTTTAGTGTATGTGCAGCTGCCTTTCATGGA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACTTCTCATCTTTCTTTaGCAAGCTCATGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTLLIFL*QAHGVN
Trigger: ATTGACTCCATGAGCTTGGCAAAGAAAGATGAGAAG...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTATTGGGAGGAAGCAAATaGTACTGCTTGCTCAACACA +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLLGGSK*YCLLNT
Trigger: TGTGTTGAGCAAGCAGTAGCATTTGCTTCCTCCCAA...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAAGCATATCGAACTATaGCCACCATGTCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELKHIEL*PPCLSH
Trigger: ATGACTTAGACATGGTGGCCATAGTTCGATATGCTT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATGGGATTTTGGTGGTTaGAAACAAGTCTTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSWDFGG*KQVFKG
Trigger: ACCCTTGAAGACTTGTTTCCAACCACCAAAATCCCA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGAGGATTTGGGATTTTaGTGGTTGGAAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELEDLGF*WLETSL
Trigger: AAGACTTGTTTCCAACCACCAAAATCCCAAATCCTC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGTAGGTCCATCTTCATaGTTGTCTTGGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELVGPSS*LSWKIS
Trigger: GGAAATTTTCCAAGACAACCATGAAGATGGACCTAC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCATGCTGTGTCTCCACTTaGTTTGTCTTTGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPCCVST*FVFGGQ
Trigger: CTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCA...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAATTTCTTGAGATTTTaGCTCCCCTTGAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLNFLRF*LPLNGR
Trigger: GCGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCACTCCAGGTAACCTGCTaGGAATTTCTTGAGATTTTG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSLQVTC*EFLEIL
Trigger: CAAAATCTCAAGAAATTCCCAGCAGGTTACCTGGAG...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCCTATTGTTTCATGTTaGATCACATCCATGCTCACG +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVPIVSC*ITSMLT
Trigger: CGTGAGCATGGATGTGATTCAACATGAAACAATAGG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp GTTGAATCACATCCATGCTCACGATTAGTGCATCCAGGAAGTCAGCCTGTTGAGATTATAATATCCAGCTaGCTTTTGCTGAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: VESHPCSRLVHPGSQPVEIIISS*LLLNRL
Trigger: CAGCCGATTCAGCAAAAGTCAGCTGGATATTATAAT...CTCAACAGGCTGACTTCCTGGATGCACTAATCGTGAGCATGGATGTGATTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR TCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATTAGAGAGAGGAATCTaGCTTTTTGTTGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSLERGI*LFVVTS
Trigger: TGAGGTGACAACAAAAAGTCAGATTCCTCTCTCTAA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAAAAACTGTTCGATGTaGTTTATGAGCTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLKNCSM*FMSWLL
Trigger: GAGTAACCAGCTCATAAATCACATCGAACAGTTTTT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAAAGCGCTGCTCTTCTaGAAACTTAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLKALLF*KLNGFF
Trigger: GAAGAAGCCATTAAGTTTTCAGAAGAGCAGCGCTTT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAATTTCCACTTTCTCTTaGAGGGCTTTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLISTFS*RAFRKL
Trigger: CAACTTCCTGAAAGCCCTTCAAGAGAAAGTGGAAAT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGAAACTTTCTCTCTTTaGGGCTTGCAAGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCETFSL*GLQVEN
Trigger: GTTCTCTACTTGCAAGCCTCAAAGAGAGAAAGTTTC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGTTGAATCACATCCATaGTCACGATTAGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLVESHP*SRLVHP
Trigger: TGGATGCACTAATCGTGAGCATGGATGTGATTCAAC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGATGAAAACATGTATTaGCGCAAGTCTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: DRGDWVPRSLYTKEELELDENMY*RKSSMK
Trigger: TTTCATGGAAGACTTGCGGCAATACATGTTTTCATC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCACTTCTCATCTTTCTTTaGCAAGCTCATGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSLLIFL*QAHGVN
Trigger: ATTGACTCCATGAGCTTGGCAAAGAAAGATGAGAAG...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGGAAGCAAATGCTACTaGTTGCTCAACACAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCGSKCY*LLNTSC
Trigger: ACAACTTGTGTTGAGCAAGCAGTAGCATTTGCTTCC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGTCGCTGTACAAACATaGTTATCACCTTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSVAVQT*LSPSLL
Trigger: AAGCAAAGAAGGTGATAACCATGTTTGTACAGCGAC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAAGAGTAATTCCATCCTaGACAACAATTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLRVIPS*TTISQK
Trigger: TTTCTGGGAAATTGTTGTCCAGGATGGAATTACTCT...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACAGACTCTCACTGAATaGATAAATTTCATCCAACCC +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLQTLTE*INFIQP
Trigger: GGGTTGGATGAAATTTATTCATTCAGTGAGAGTCTG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCCAGACTCTCACTGAATaGATAAATTTCATCCAACCC +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCQTLTE*INFIQP
Trigger: GGGTTGGATGAAATTTATTCATTCAGTGAGAGTCTG...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGAACTTGATTTCCCATaGAGAATCTTCTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLELDFP*RIFSEP
Trigger: AGGTTCAGAGAAGATTCTTCATGGGAAATCAAGTTC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGTTAGAGAGAGGAATCTaGCTTTTTGTTGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVLERGI*LFVVTS
Trigger: TGAGGTGACAACAAAAAGTCAGATTCCTCTCTCTAA...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACATCAAGACCTTCTTTTTaGTGTTCGGTAATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTSRPSF*CSVIPF
Trigger: AAAAGGAATTACCGAACAGCAAAAAGAAGGTCTTGA...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGATGAAAACATGTATTaGCGCAAGTCTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSDENMY*RKSSMK
Trigger: TTTCATGGAAGACTTGCGGCAATACATGTTTTCATC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACGCCTCCAGGTAACCTaGTGGGAATTTCTTGAGATT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPRLQVT*WEFLEI
Trigger: AATCTCAAGAAATTCCCAGCAGGTTACCTGGAGGCG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCTTTGCTTGTTCAAATaGGGATTCTATACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNLCLFK*GFYTRN
Trigger: ATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAAGCATATCGAACTATaGCCACCATGTCTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCKHIEL*PPCLSH
Trigger: ATGACTTAGACATGGTGGCCATAGTTCGATATGCTT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGGTAGGTCCATCTTCATaGTTGTCTTGGAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVVGPSS*LSWKIS
Trigger: GGAAATTTTCCAAGACAACCATGAAGATGGACCTAC...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp GCTATGAATTATAATATCCAGCTGACTTTTGCTGAATCGGCTGCTGAGGTCAGTCCTATTGTTTCATGTTaGATCACATCCATGCTCACG +
Preference number: 4 (lower is better)
Translates to: AMNYNIQLTFAESAAEVSPIVSC*ITSMLT
Trigger: CGTGAGCATGGATGTGATTCAACATGAAACAATAGG...ACTGACCTCAGCAGCCGATTCAGCAAAAGTCAGCTGGATATTATAATTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGTTCGATGTGATTTATaGGCTGGTTACTCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPVRCDL*AGYSLP
Trigger: AGGAAGCGAGTAACCAGCTCATAAATCACATCGAAC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACACTTCCATCTTCCTTaGCAAGTGAGAAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPHFHLP*QVRKAR
Trigger: TCTTGCCTTTCTCACTTGGCAAGGAAGATGGAAGTG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAAGACCTTCTTTTTaGTGTTCGGTAATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNSRPSF*CSVIPF
Trigger: AAAAGGAATTACCGAACAGCAAAAAGAAGGTCTTGA...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAAAGTTGTTAAAGCGCTaGTCTTCTGAAAACTTAATG +
Preference number: 4 (lower is better)
Translates to: HAMVPHETLITSQGLQLSKLLKR*SSENLM
Trigger: CATTAAGTTTTCAGAAGAGCAGCGCTTTAACAACTT...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCATTGGGAGGAAGCAAATaGTACTGCTTGCTCAACACA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPLGGSK*YCLLNT
Trigger: TGTGTTGAGCAAGCAGTAGCATTTGCTTCCTCCCAA...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCCTTTGCTTGTTCAAATaGGGATTCTATACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCLCLFK*GFYTRN
Trigger: ATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAG...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCATCAACTGTGCCTCGGTaGGAGCATATTTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPSTVPR*EHISYC
Trigger: ACAGTAAGAAATATGCTCCCACCGAGGCACAGTTGA...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAGAGTAATTCCATCCTaGACAACAATTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HPTCFVRTPSITAMAALLRVIPS*TTISQK
Trigger: TTTCTGGGAAATTGTTGTCCAGGATGGAATTACTCT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAAATTTCTTGAGATTTTaGCTCCCCTTGAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPNFLRF*LPLNGR
Trigger: GCGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATT...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAAAAGCGCTGCTCTTCTaGAAACTTAATGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPKALLF*KLNGFF
Trigger: GAAGAAGCCATTAAGTTTTCAGAAGAGCAGCGCTTT...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGGCTGCAACTGTCACTaGTATACTAGGTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPGCNCH*YTRSRK
Trigger: TTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAAAGGTCTTTTCTTCATaGGACCACCACCATAACTCA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPKVFSS*DHHHNS
Trigger: TGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTT...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGTTGAATCACATCCATaGTCACGATTAGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPVESHP*SRLVHP
Trigger: TGGATGCACTAATCGTGAGCATGGATGTGATTCAAC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR GCA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAAGTTGTTAAAGCGCTaGTCTTCTGAAAACTTAATG +
Preference number: 4 (lower is better)
Translates to: RDWAKRSFLHETTTITHCKLLKR*SSENLM
Trigger: CATTAAGTTTTCAGAAGAGCAGCGCTTTAACAACTT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGAACTTGATTTCCCATaGAGAATCTTCTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPELDFP*RIFSEP
Trigger: AGGTTCAGAGAAGATTCTTCATGGGAAATCAAGTTC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGAGGATTTGGGATTTTaGTGGTTGGAAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPEDLGF*WLETSL
Trigger: AAGACTTGTTTCCAACCACCAAAATCCCAAATCCTC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACTGAAATCGAGGATTTaGGATTTTGGTGGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPLKSRI*DFGGWK
Trigger: TTTCCAACCACCAAAATCCCAAATCCTCGATTTCAG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR TCA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAAAAAACTGTTCGATGTaGTTTATGAGCTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: TRAATVTDILGQEKIYFPKNCSM*FMSWLL
Trigger: GAGTAACCAGCTCATAAATCACATCGAACAGTTTTT...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS CCA 90 bp TGCCTTATTCCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTTaGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCGCAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: CLIPRPHHVAGPQAL*SLLPGGNLPCRNSL
Trigger: AAGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000429133.5
ENST00000476360.1
CDS CCA 90 bp CAGCTTATTCCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTTaGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCGCAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: QLIPRPHHVAGPQAL*SLLPGGNLPCRNSL
Trigger: AAGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417391.1
CDS GCA 90 bp CCATACACAGCACAACAGCTGCCTTATTCCCCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGGGCGGGAACCT +
Preference number: 5 (lower is better)
Translates to: PYTAQQLPYSPTAPC*RSSGALVASSGREP
Trigger: AGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGGCAGCTGTTGTGCTGTGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000429133.5
ENST00000476360.1
CDS GCA 90 bp AGAGCTACAAAGTTTTCAGCAGCTTATTCCCCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGGGCGGGAACCT +
Preference number: 5 (lower is better)
Translates to: RATKFSAAYSPTAPC*RSSGALVASSGREP
Trigger: AGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGCTGCTGAAAACTTTGTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417391.1
CDS CCA 90 bp CGAGCATGCGCACATTCTCTCCATTCCGCCGTAGTCGGGAGCGTGTaGTGTTTGAGCCGCCTGAAACGCATATCTTGTCAGTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RACAHSLHSAVVGSV*CLSRLKRISCQWSL
Trigger: CAAGGACCACTGACAAGATATGCGTTTCAGGCGGCTCAAACACCACACGCTCCCGACTACGGCGGAATGGAGAGAATGTGCGCATGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCCCGACCGCACCATGTaGCCGGTCCTCAGGCGCTTT +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWPDRTM*PVLRRF
Trigger: AAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCGGTCCTCAGGCGCTTaGGTCGCTTCTTCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVRSSGA*VASSGR
Trigger: CCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCCCGACCGCACCATGTaGCCGGTCCTCAGGCGCTTT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNPDRTM*PVLRRF
Trigger: AAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS TCA 90 bp GTTGTCACCTCAGCGGGAGGATTCAGCATATTCCAAATATGCTGCTaGATTGGGGGTAGAGGCTCCCGGGGATGTAAAGCTCTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: VVTSAGGFSIFQICC*IGGRGSRGCKALCS
Trigger: GCTGCACAGAGCTTTACATCCCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAATATGCTGAATCCTCCCGCTGAGGTGACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGGGGAGCGTGTGGTGTTaGAGCCGCCTGAAACGCATA +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWGSVWC*SRLKRI
Trigger: TATGCGTTTCAGGCGGCTCAAACACCACACGCTCCC...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CAA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACGGTCCTCAGGCGCTTaGGTCGCTTCTTCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: TRAATVTDILGQEKIYFPRSSGA*VASSGR
Trigger: CCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCTGCTGTGTCTCCACTaGGTTTGTCTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWLLCLH*VCLWGP
Trigger: TGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACTGCTGTGTCTCCACTaGGTTTGTCTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTLLCLH*VCLWGP
Trigger: TGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAG...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCCCACCAGAAAGGGGATaGTCAGTGCCATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELPPERG*SVPSVP
Trigger: TGGTACAGATGGCACTGACAATCCCCTTTCTGGTGG...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGGGGCCAGAAACTTTTaGGCTTCCTCAGCTGTGACA +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELGARNF*ASSAVT
Trigger: TGTCACAGCTGAGGAAGCCAAAAAGTTTCTGGCCCC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGTGTCTCCACTTGGTTaGTCTTTGGGGGCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELVSPLG*SLGARN
Trigger: GTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACAC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACGAGTATGAAGGGAAATaGTGCTCCCCTTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNEYEGK*CSPSHP
Trigger: GGGGTGGGAAGGGGAGCACAATTTCCCTTCATACTC...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS GCA 90 bp AGGGAACAATCTGCTAGCATTGCCACAGCAAAACCTAAGGCAGCCTaGTTAGCAGTCTCACTGCCAACGGCCCAAAAGAAACATCATCCT +
Preference number: 5 (lower is better)
Translates to: REQSASIATAKPKAA*LAVSLPTAQKKHHP
Trigger: AGGATGATGTTTCTTTTGGGCCGTTGGCAGTGAGACTGCTAAGCAGGCTGCCTTAGGTTTTGCTGTGGCAATGCTAGCAGATTGTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CCA 90 bp CTGCTTAGCAGTCTCACTGCCAACGGCCCAAAAGAAACATCATCCTaGCATACGCTACTTCATTTGGCTTTGGGTGAGAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LLSSLTANGPKETSS*HTLLHLALGERPSF
Trigger: AAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTGGGCCGTTGGCAGTGAGACTGCTAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAAATATGCTGCTGAATaGGGGGTAGAGGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLKYAAE*GVEAPG
Trigger: CCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAAATATGCTGCTGAATaGGGGGTAGAGGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: RDWAKRSFLHETTTITHCKYAAE*GVEAPG
Trigger: CCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGGGGCCAGAAACTTTTaGGCTTCCTCAGCTGTGACA +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSGARNF*ASSAVT
Trigger: TGTCACAGCTGAGGAAGCCAAAAAGTTTCTGGCCCC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCAGATTTTGGCTCCCCTaGAATGGCCGCATCCAACTT +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELRFWLP*NGRIQL
Trigger: AAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATCT...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCGAGTATGAAGGGAAATaGTGCTCCCCTTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: RDWAKRSFLHETTTITHCEYEGK*CSPSHP
Trigger: GGGGTGGGAAGGGGAGCACAATTTCCCTTCATACTC...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS GCA 90 bp ATAGTCAATGCTCACATATACTCCCTAGGATCTTCCCCCTTCCTATaGCTCCCAACCTCTCAGTATCACCCATGCAGAGAACAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: IVNAHIYSLGSSPFL*LPTSQYHPCREQGS
Trigger: ACTTCCCTGTTCTCTGCATGGGTGATACTGAGAGGTTGGGAGGCATAGGAAGGGGGAAGATCCTAGGGAGTATATGTGAGCATTGACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460284.5
CDS CCA 90 bp GTCCACATCACCACCTTCTTCAAATACAGCTGCTGTGTCTCCACTTaGTTTGTCTTTGGGGGCCAGAAACTTTTTGGCTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: VHITTFFKYSCCVST*FVFGGQKLFGFLSC
Trigger: ACAGCTGAGGAAGCCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAGCTGTATTTGAAGAAGGTGGTGATGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCCACCAGAAAGGGGATaGTCAGTGCCATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVPPERG*SVPSVP
Trigger: TGGTACAGATGGCACTGACAATCCCCTTTCTGGTGG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTAGAACCTGGTTGGATTTaGCTTTCAATGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLEPGWI*LSMSSS
Trigger: GCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTC...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACAGGAAGTCAGCCTGTaGAGAACCTGGTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTQEVSL*RTWLDF
Trigger: AAAATCCAACCAGGTTCTCAACAGGCTGACTTCCTG...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCAGGAAGTCAGCCTGTaGAGAACCTGGTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWQEVSL*RTWLDF
Trigger: AAAATCCAACCAGGTTCTCAACAGGCTGACTTCCTG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCCACTTCCATCTTCCTaGCCAAGTGAGAAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNPLPSS*PSEKGK
Trigger: CTTGCCTTTCTCACTTGGCAAGGAAGATGGAAGTGG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAAAAGCCACGCCGACTaGAGGATTAGCTCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTKSHAD*RISSFV
Trigger: GACAAAAGAGCTAATCCTCAAGTCGGCGTGGCTTTT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGAGGAATCTGACTTTTaGTTGTCACCTCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSEESDF*LSPQRE
Trigger: CTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACCACTTGGTTTGTCTTaGGGGGCCAGAAACTTTTTG +
Preference number: 5 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLPLGLS*GARNFL
Trigger: CAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAGATTTTGGCTCCCCTaGAATGGCCGCATCCAACTT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNRFWLP*NGRIQL
Trigger: AAGTTGGATGCGGCCATTCAAGGGGAGCCAAAATCT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCGAATTTCTTGAGATTTaGGCTCCCCTTGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELEFLEI*APLEWP
Trigger: CGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATTC...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCCTGAAACGCATATCTaGTCAGTGGTCCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNPETHI*SVVLVS
Trigger: GGAGACAAGGACCACTGACAAGATATGCGTTTCAGG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACCACTTCCATCTTCCTaGCCAAGTGAGAAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLPLPSS*PSEKGK
Trigger: CTTGCCTTTCTCACTTGGCAAGGAAGATGGAAGTGG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGATCCTTATAGACAAATaGGAGCCAATGGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWILIDK*EPMVSR
Trigger: CCGACTGACCATTGGCTCCAATTTGTCTATAAGGAT...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGCTGCCTCATCATCTCTaGCTGCAAAGACCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWLPHHL*LQRPLE
Trigger: TTCTAAAGGTCTTTGCAGCAAGAGATGATGAGGCAG...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTTGGGATTTTGGTGGTaGGAAACAAGTCTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELLGFWW*ETSLQG
Trigger: CCCTTGAAGACTTGTTTCCAACCACCAAAATCCCAA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCCGAGGATTTGGGATTTaGGTGGTTGGAAACAAGTCT +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELRGFGI*VVGNKS
Trigger: AGACTTGTTTCCAACCACCAAAATCCCAAATCCTCG...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAAGGGCTTTCAGGAAGTaGTTAAAGCGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSRAFRK*LKRCSS
Trigger: AGAAGAGCAGCGCTTTAACAACTTCCTGAAAGCCCT...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAGGGCTTTCAGGAAGTaGTTAAAGCGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNRAFRK*LKRCSS
Trigger: AGAAGAGCAGCGCTTTAACAACTTCCTGAAAGCCCT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCAGAATTTCTTGAGATTTaGGCTCCCCTTGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSEFLEI*APLEWP
Trigger: CGGCCATTCAAGGGGAGCCAAAATCTCAAGAAATTC...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACCTGCTGGGAATTTCTaGAGATTTTGGCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLPAGNF*RFWLPL
Trigger: CAAGGGGAGCCAAAATCTCAAGAAATTCCCAGCAGG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACTGATATGGCAGAGATaGGGCCAAAAGGTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLLIWQR*GQKVFS
Trigger: AGAAAAGACCTTTTGGCCCAATCTCTGCCATATCAG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAAAGCAATCTCATCCTaGTTCTCAGCAAACACCTGT +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTKAISS*FSANTC
Trigger: ACAGGTGTTTGCTGAGAACAAGGATGAGATTGCTTT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGAACCTGGTTGGATTTaGCTTTCAATGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLEPGWI*LSMSSS
Trigger: GCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELLLRTW*DFAFNV
Trigger: GACATTGAAAGCAAAATCCAACCAGGTTCTCAACAG...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACATGCCTCTCAATTTTCTaGAAGACGCACAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTCLSIF*KTHSFL
Trigger: GAGAAAACTGTGCGTCTTCAAGAAAATTGAGAGGCA...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCACTGCCTCATCATCTCTaGCTGCAAAGACCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSLPHHL*LQRPLE
Trigger: TTCTAAAGGTCTTTGCAGCAAGAGATGATGAGGCAG...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCAAAAGCCACGCCGACTaGAGGATTAGCTCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: RDWAKRSFLHETTTITHCKSHAD*RISSFV
Trigger: GACAAAAGAGCTAATCCTCAAGTCGGCGTGGCTTTT...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATTGGGATTTTGGTGGTaGGAAACAAGTCTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSLGFWW*ETSLQG
Trigger: CCCTTGAAGACTTGTTTCCAACCACCAAAATCCCAA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCGAGGATTTGGGATTTaGGTGGTTGGAAACAAGTCT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNRGFGI*VVGNKS
Trigger: AGACTTGTTTCCAACCACCAAAATCCCAAATCCTCG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTCTGAAATCGAGGATTaGGGATTTTGGTGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELSEIED*GFWWLE
Trigger: TTCCAACCACCAAAATCCCAAATCCTCGATTTCAGA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGGAATCTGACTTTTTGTaGTCACCTCAGCGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVESDFL*SPQRED
Trigger: ATCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTC...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAGAATCTGACTTTTTGTaGTCACCTCAGCGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLESDFL*SPQRED
Trigger: ATCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTC...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCCACTTGGTTTGTCTTaGGGGGCCAGAAACTTTTTG +
Preference number: 5 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVPLGLS*GARNFL
Trigger: CAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACCTGATATGGCAGAGATaGGGCCAAAAGGTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNLIWQR*GQKVFS
Trigger: AGAAAAGACCTTTTGGCCCAATCTCTGCCATATCAG...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CAAGTTGTGACAGCTGTTGGAGGATCAGGCAAAGGAGGACTCTGGAAAGGGTTACGAAACTTTCTCTCTTaGAGGCTTGCAAGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: QVVTAVGGSGKGGLWKGLRNFLS*RLASRE
Trigger: TTCTCTACTTGCAAGCCTCAAAGAGAGAAAGTTTCG...TAACCCTTTCCAGAGTCCTCCTTTGCCTGATCCTCCAACAGCTGTCACAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS TCA 90 bp ATCCTTATAGACAAATTGGAGCCAATGGTCAGTCGGCAGGGCCAGTaGATGGAATGCCTCTCAATTTTCTTGAAGACGCACAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ILIDKLEPMVSRQGQ*MECLSIFLKTHSFL
Trigger: GAGAAAACTGTGCGTCTTCAAGAAAATTGAGAGGCATTCCATTCACTGGCCCTGCCGACTGACCATTGGCTCCAATTTGTCTATAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000493706.1
CDS TCA 90 bp CAACTGTGCCTCGGTGGGAGCATATTTCTTACTGTTTTTCAAGGATaGAAACATGTATTGCCGCAAGTCTTCCATGAAAGGCAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QLCLGGSIFLTVFQG*KHVLPQVFHERQLH
Trigger: GTGCAGCTGCCTTTCATGGAAGACTTGCGGCAATACATGTTTTCATCCTTGAAAAACAGTAAGAAATATGCTCCCACCGAGGCACAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAAAGCAATCTCATCCTaGTTCTCAGCAAACACCTGT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNKAISS*FSANTC
Trigger: ACAGGTGTTTGCTGAGAACAAGGATGAGATTGCTTT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACATCCTATTGTTTCATGTaGAATCACATCCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTSYCFM*NHIHAH
Trigger: GTGAGCATGGATGTGATTCAACATGAAACAATAGGA...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGTCCTATTGTTTCATGTaGAATCACATCCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: LKTEVTGYQEVCTPKRNWSYCFM*NHIHAH
Trigger: GTGAGCATGGATGTGATTCAACATGAAACAATAGGA...CCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAATCCTTATAGACAAATaGGAGCCAATGGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLILIDK*EPMVSR
Trigger: CCGACTGACCATTGGCTCCAATTTGTCTATAAGGAT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATCTGAAATCGAGGATTaGGGATTTTGGTGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSSEIED*GFWWLE
Trigger: TTCCAACCACCAAAATCCCAAATCCTCGATTTCAGA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CGACTTATGAGGGTGCTGAAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACAAATTTCCACTTTCTCTaGAAGGGCTTTCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: RLMRVLKTEVTGYQEVCTNFHFL*KGFQEV
Trigger: AACTTCCTGAAAGCCCTTCAAGAGAAAGTGGAAATT...TGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTTCAGCACCCTCATAAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCAGTGTCTCCACTTGGTTaGTCTTTGGGGGCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TRAATVTDILGQEKIYFPVSPLG*SLGARN
Trigger: GTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACAC...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCCGCATCCAACTTGTTTaGTTAGAACTCCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: RDWAKRSFLHETTTITHCRIQLV*LELPAS
Trigger: TGATGCTGGGAGTTCTAACAAAACAAGTTGGATGCG...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACGCATCCAACTTGTTTaGTTAGAACTCCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLRIQLV*LELPAS
Trigger: TGATGCTGGGAGTTCTAACAAAACAAGTTGGATGCG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTAAGCAAATGCTACTGCTaGCTCAACACAAGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLSKCYC*LNTSCD
Trigger: GTCACAACTTGTGTTGAGCAAGCAGTAGCATTTGCT...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp GACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACTCTATCACCTTCTTTGCTaGTTCAAATGGGGATTCTAT +
Preference number: 5 (lower is better)
Translates to: DRGDWVPRSLYTKEELELYHLLC*FKWGFY
Trigger: ATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATA...GAGTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp CATGCCATGGTTCCACATGAGACACTAATCACATCACAAGGGCTGCAACTGTCATGGTTATCACCTTCTTaGCTTGTTCAAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: HAMVPHETLITSQGLQLSWLSPS*LVQMGI
Trigger: AATCCCCATTTGAACAAGCAAAGAAGGTGATAACCA...TGACAGTTGCAGCCCTTGTGATGTGATTAGTGTCTCATGTGGAACCATGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp TCTTTCCTATTGTTTCATGTTGAATCACATCCATGCTCACGATTAGTGCATCCACCACCAGAAAGGGGATaGTCAGTGCCATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: SFLLFHVESHPCSRLVHPPPERG*SVPSVP
Trigger: TGGTACAGATGGCACTGACAATCCCCTTTCTGGTGG...TGGATGCACTAATCGTGAGCATGGATGTGATTCAACATGAAACAATAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR CAA 90 bp CCCTTCCCACCCCACTTAAAGAAAACCACCTATATACAGAGGCAGAGTAATGTGCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: PFPPHLKKTTYIQRQSNVLLRTW*DFAFNV
Trigger: GACATTGAAAGCAAAATCCAACCAGGTTCTCAACAG...CACATTACTCTGCCTCTGTATATAGGTGGTTTTCTTTAAGTGGGGTGGGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp TGTTCTGATACTGATCCCCACCAGAAAGGGGATTGTCAGTGCCATCTGTACCAATCCTATTGTTTCATGTaGAATCACATCCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: CSDTDPHQKGDCQCHLYQSYCFM*NHIHAH
Trigger: GTGAGCATGGATGTGATTCAACATGAAACAATAGGA...TTGGTACAGATGGCACTGACAATCCCCTTTCTGGTGGGGATCAGTATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR CAA 90 bp AAGACAGAGGTGACTGGGTACCAAGAAGTCTGTACACCAAAGAGGAACTGGAACAATTTCCACTTTCTCTaGAAGGGCTTTCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KTEVTGYQEVCTPKRNWNNFHFL*KGFQEV
Trigger: AACTTCCTGAAAGCCCTTCAAGAGAAAGTGGAAATT...GTTCCAGTTCCTCTTTGGTGTACAGACTTCTTGGTACCCAGTCACCTCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS GCA 90 bp GGTTGGAAACAAGTCTTCAAGGGTGTCTGTCTTCTCATCTTTCTTTaGCAAGCTCATGGAGTCAATCAAAGCATCAACAGCATTCAACTG +
Preference number: 5 (lower is better)
Translates to: GWKQVFKGVCLLIFL*QAHGVNQSINSIQL
Trigger: CAGTTGAATGCTGTTGATGCTTTGATTGACTCCATGAGCTTGGCAAAGAAAGATGAGAAGACAGACACCCTTGAAGACTTGTTTCCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CCA 90 bp CTGTCGCTGTACAAACATGGTTATCACCTTCTTTGCTTGTTCAAATaGGGATTCTATACCAGGAATGGAGTTACTCATGGTAAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: LSLYKHGYHLLCLFK*GFYTRNGVTHGKAH
Trigger: GTGGGCTTTACCATGAGTAACTCCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS-3UTR CAA 90 bp TTTGCTGAATCGGCTGCTGAGGTCAGTGAATATTTCAATATGCCTCTTCTCAAACAGGAAGTCAGCCTGTaGAGAACCTGGTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: FAESAAEVSEYFNMPLLKQEVSL*RTWLDF
Trigger: AAAATCCAACCAGGTTCTCAACAGGCTGACTTCCTG...TTTGAGAAGAGGCATATTGAAATATTCACTGACCTCAGCAGCCGATTCAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR CAA 90 bp CATCCAACTTGTTTTGTTAGAACTCCCAGCATCACAGCGATGGCAGCTCTCTTACTCAAGACCTTCTTTTaGCTGTTCGGTAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: HPTCFVRTPSITAMAALLLKTFF*LFGNSF
Trigger: AAAGGAATTACCGAACAGCAAAAAGAAGGTCTTGAG...TAAGAGAGCTGCCATCGCTGTGATGCTGGGAGTTCTAACAAAACAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp AGAGATTGGGCCAAAAGGTCTTTTCTTCATGAGACCACCACCATAACTCACTGCCTCAAGACCTTCTTTTaGCTGTTCGGTAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: RDWAKRSFLHETTTITHCLKTFF*LFGNSF
Trigger: AAAGGAATTACCGAACAGCAAAAAGAAGGTCTTGAG...GCAGTGAGTTATGGTGGTGGTCTCATGAAGAAAAGACCTTTTGGCCCAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS GCA 90 bp CTCAGCAAACACCTGTCGCTGTACAAACATGGTTATCACCTTCTTTaGTTGTTCAAATGGGGATTCTATACCAGGAATGGAGTTACTCAT +
Preference number: 5 (lower is better)
Translates to: LSKHLSLYKHGYHLL*LFKWGFYTRNGVTH
Trigger: ATGAGTAACTCCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGTTTGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CCA 90 bp GCAGCAGACACTGAAATAATCTCTGAAATCGAGGATTTGGGATTTTaGTGGTTGGAAACAAGTCTTCAAGGGTGTCTGTCTTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: AADTEIISEIEDLGF*WLETSLQGCLSSHL
Trigger: AAGATGAGAAGACAGACACCCTTGAAGACTTGTTTCCAACCACCAAAATCCCAAATCCTCGATTTCAGAGATTATTTCAGTGTCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS-3UTR CAA 90 bp TCTTTCCTATTGTTTCATGTTGAATCACATCCATGCTCACGATTAGTGCATCCAGAACCTGGTTGGATTTaGCTTTCAATGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFLLFHVESHPCSRLVHPEPGWI*LSMSSS
Trigger: GCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTC...TGGATGCACTAATCGTGAGCATGGATGTGATTCAACATGAAACAATAGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS-3UTR CAA 90 bp CAAGCTATGAATTATAATATCCAGCTGACTTTTGCTGAATCGGCTGCTGAGGTCCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: QAMNYNIQLTFAESAAEVLLRTW*DFAFNV
Trigger: GACATTGAAAGCAAAATCCAACCAGGTTCTCAACAG...GACCTCAGCAGCCGATTCAGCAAAAGTCAGCTGGATATTATAATTCATAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451695.5
CDS CCA 90 bp GCAGACACTGAAATAATCTCTGAAATCGAGGATTTGGGATTTTGGTaGTTGGAAACAAGTCTTCAAGGGTGTCTGTCTTCTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: ADTEIISEIEDLGFW*LETSLQGCLSSHLS
Trigger: AGAAAGATGAGAAGACAGACACCCTTGAAGACTTGTTTCCAACCACCAAAATCCCAAATCCTCGATTTCAGAGATTATTTCAGTGTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS-3UTR CAA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCACGAAACTTTCTCTCTTaGAGGCTTGCAAGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: TRAATVTDILGQEKIYFPRNFLS*RLASRE
Trigger: TTCTCTACTTGCAAGCCTCAAAGAGAGAAAGTTTCG...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS-3UTR CAA 90 bp ACAAGGGCTGCAACTGTCACTGATATACTAGGTCAAGAAAAGATCTACTTTCCATGGTTATCACCTTCTTaGCTTGTTCAAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: TRAATVTDILGQEKIYFPWLSPS*LVQMGI
Trigger: AATCCCCATTTGAACAAGCAAAGAAGGTGATAACCA...TGGAAAGTAGATCTTTTCTTGACCTAGTATATCAGTGACAGTTGCAGCCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392132.7
ENST00000392133.7
CDS TCA 90 bp TTCATAAAATACGGTGTTTCATTAGTATCCAAAAACTGTTCGATGTaGTTTATGAGCTGGTTACTCGCTTCCTCAAAGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FIKYGVSLVSKNCSM*FMSWLLASSKLAFF
Trigger: GAAGAAGGCCAGCTTTGAGGAAGCGAGTAACCAGCTCATAAATCACATCGAACAGTTTTTGGATACTAATGAAACACCGTATTTTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CCA 72 bp CCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTTaGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCGC +
Preference number: 6 (lower is better)
Translates to: PRPHHVAGPQAL*SLLPGGNLPCR
Trigger: GCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 72 bp TCCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTaGGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCG +
Preference number: 6 (lower is better)
Translates to: SPTAPCCRSSGA*VASSGREPAVS
Trigger: CGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS GCA 72 bp CTCAGGCGCTTTGGTCGCTTCTTCCGGGCGGGAACCTaGCGTGTCGCAACTCGCTTCCGGTGGACAAGCGGC +
Preference number: 6 (lower is better)
Translates to: LRRFGRFFRAGT*RVATRFRWTSG
Trigger: GCCGCTTGTCCACCGGAAGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 90 bp CTGCCTTATTCCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTaGGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCGCAACTCGCT +
Preference number: 6 (lower is better)
Translates to: LPYSPTAPCCRSSGA*VASSGREPAVSQLA
Trigger: AGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000429133.5
ENST00000476360.1
CDS CAA 90 bp GCAGCTTATTCCCCGACCGCACCATGTTGCCGGTCCTCAGGCGCTTaGGTCGCTTCTTCCGGGCGGGAACCTGCCGTGTCGCAACTCGCT +
Preference number: 6 (lower is better)
Translates to: AAYSPTAPCCRSSGA*VASSGREPAVSQLA
Trigger: AGCGAGTTGCGACACGGCAGGTTCCCGCCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417391.1
CDS GCA 72 bp GCACAACAGCTGCCTTATTCCCCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: AQQLPYSPTAPC*RSSGALVASSG
Trigger: CCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGGCAGCTGTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000429133.5
ENST00000476360.1
CDS CAA 72 bp AGCACAACAGCTGCCTTATTCCCCGACCGCACCATGTaGCCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: STTAALFPDRTM*PVLRRFGRFFR
Trigger: CCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGGCAGCTGTTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000429133.5
ENST00000476360.1
CDS GCA 72 bp AAGTTTTCAGCAGCTTATTCCCCGACCGCACCATGTTaGCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: KFSAAYSPTAPC*RSSGALVASSG
Trigger: CCCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGCTGCTGAAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417391.1
CDS CAA 72 bp TCTCTCCATTCCGCCGTAGTCGGGAGCGTGTGGTGTTaGAGCCGCCTGAAACGCATATCTTGTCAGTGGTCC +
Preference number: 6 (lower is better)
Translates to: SLHSAVVGSVWC*SRLKRISCQWS
Trigger: GGACCACTGACAAGATATGCGTTTCAGGCGGCTCAAACACCACACGCTCCCGACTACGGCGGAATGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS CAA 72 bp AAAGTTTTCAGCAGCTTATTCCCCGACCGCACCATGTaGCCGGTCCTCAGGCGCTTTGGTCGCTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: KVFSSLFPDRTM*PVLRRFGRFFR
Trigger: CCGGAAGAAGCGACCAAAGCGCCTGAGGACCGGCAACATGGTGCGGTCGGGGAATAAGCTGCTGAAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417391.1
CDS CCA 72 bp GCACATTCTCTCCATTCCGCCGTAGTCGGGAGCGTGTaGTGTTTGAGCCGCCTGAAACGCATATCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: AHSLHSAVVGSV*CLSRLKRISCQ
Trigger: CTGACAAGATATGCGTTTCAGGCGGCTCAAACACCACACGCTCCCGACTACGGCGGAATGGAGAGAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392133.7
CDS CAA 90 bp TCACCTCAGCGGGAGGATTCAGCATATTCCAAATATGCTGCTGAATaGGGGGTAGAGGCTCCCGGGGATGTAAAGCTCTGTGCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SPQREDSAYSKYAAE*GVEAPGDVKLCAAD
Trigger: GTCTGCTGCACAGAGCTTTACATCCCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAATATGCTGAATCCTCCCGCTGAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CCA 72 bp TGTTCGGTAATTCCTTTTAGTGGAAAGGAAGGCCCATaGCCACCTAAGCGAAAGGGGCCATCTCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: CSVIPFSGKEGP*PPKRKGPSPLS
Trigger: GGACAGAGGAGATGGCCCCTTTCGCTTAGGTGGCCATGGGCCTTCCTTTCCACTAAAAGGAATTACCGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS TCA 72 bp TCAGCGGGAGGATTCAGCATATTCCAAATATGCTGCTaGATTGGGGGTAGAGGCTCCCGGGGATGTAAAGCT +
Preference number: 6 (lower is better)
Translates to: SAGGFSIFQICC*IGGRGSRGCKA
Trigger: AGCTTTACATCCCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAATATGCTGAATCCTCCCGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS GCA 72 bp GCTCACATATACTCCCTAGGATCTTCCCCCTTCCTATaGCTCCCAACCTCTCAGTATCACCCATGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: AHIYSLGSSPFL*LPTSQYHPCRE
Trigger: TTCTCTGCATGGGTGATACTGAGAGGTTGGGAGGCATAGGAAGGGGGAAGATCCTAGGGAGTATATGTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460284.5
CDS GCA 72 bp TCTGCTAGCATTGCCACAGCAAAACCTAAGGCAGCCTaGTTAGCAGTCTCACTGCCAACGGCCCAAAAGAAA +
Preference number: 6 (lower is better)
Translates to: SASIATAKPKAA*LAVSLPTAQKK
Trigger: TTTCTTTTGGGCCGTTGGCAGTGAGACTGCTAAGCAGGCTGCCTTAGGTTTTGCTGTGGCAATGCTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CAA 72 bp CGGGAGGATTCAGCATATTCCAAATATGCTGCTGAATaGGGGGTAGAGGCTCCCGGGGATGTAAAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: REDSAYSKYAAE*GVEAPGDVKLC
Trigger: ACAGAGCTTTACATCCCCGGGAGCCTCTACCCCCAATTCAGCAGCATATTTGGAATATGCTGAATCCTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CAA 90 bp CGTCCACATCACCACCTTCTTCAAATACAGCTGCTGTGTCTCCACTaGGTTTGTCTTTGGGGGCCAGAAACTTTTTGGCTTCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: RPHHHLLQIQLLCLH*VCLWGPETFWLPQL
Trigger: CAGCTGAGGAAGCCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAGCTGTATTTGAAGAAGGTGGTGATGTGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS TCA 72 bp CGAACTATGGCCACCATGTCTAAGTCATCCAAAGCATaGATCAGGGAGGAAAGTGCAACTGCAGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: RTMATMSKSSKA*IREESATAAAS
Trigger: TGAGGCAGCTGCAGTTGCACTTTCCTCCCTGATTCATGCTTTGGATGACTTAGACATGGTGGCCATAGTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CCA 72 bp AGTCTCACTGCCAACGGCCCAAAAGAAACATCATCCTaGCATACGCTACTTCATTTGGCTTTGGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SLTANGPKETSS*HTLLHLALGER
Trigger: CCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTGGGCCGTTGGCAGTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CAA 90 bp GCCAACGGCCCAAAAGAAACATCATCCTGGCATACGCTACTTCATTaGGCTTTGGGTGAGAGGCCCAGTTTTGAGGTTCAAGTAGTCCAT +
Preference number: 6 (lower is better)
Translates to: ANGPKETSSWHTLLH*ALGERPSFEVQVVH
Trigger: ATGGACTACTTGAACCTCAAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTGGGCCGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CCA 72 bp GTGCATCCAGGACTCAGAGTCAGCCTGTTGAGAACCTaGTTGGATTTTGCTTTCAATGTCCTCCAGCAAATC +
Preference number: 6 (lower is better)
Translates to: VHPGLRVSLLRT*LDFAFNVLQQI
Trigger: GATTTGCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTCTCAACAGGCTGACTCTGAGTCCTGGATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429133.5
CDS CAA 72 bp TCAAATACAGCTGCTGTGTCTCCACTTGGTTTGTCTTaGGGGGCCAGAAACTTTTTGGCTTCCTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SNTAAVSPLGLS*GARNFLASSAV
Trigger: CACAGCTGAGGAAGCCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAGCTGTATTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CAA 90 bp GGCCCAAAAGAAACATCATCCTGGCATACGCTACTTCATTTGGCTTaGGGTGAGAGGCCCAGTTTTGAGGTTCAAGTAGTCCATACTAAC +
Preference number: 6 (lower is better)
Translates to: GPKETSSWHTLLHLA*GERPSFEVQVVHTN
Trigger: GTTAGTATGGACTACTTGAACCTCAAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CCA 72 bp ACCACCTTCTTCAAATACAGCTGCTGTGTCTCCACTTaGTTTGTCTTTGGGGGCCAGAAACTTTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: TTFFKYSCCVST*FVFGGQKLFGF
Trigger: GAAGCCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAGCTGTATTTGAAGAAGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CAA 72 bp CCTTCTTCAAATACAGCTGCTGTGTCTCCACTTGGTTaGTCTTTGGGGGCCAGAAACTTTTTGGCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSSNTAAVSPLG*SLGARNFLASS
Trigger: TGAGGAAGCCAAAAAGTTTCTGGCCCCCAAAGACAAACCAAGTGGAGACACAGCAGCTGTATTTGAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS CAA 72 bp GAAACATCATCCTGGCATACGCTACTTCATTTGGCTTaGGGTGAGAGGCCCAGTTTTGAGGTTCAAGTAGTC +
Preference number: 6 (lower is better)
Translates to: ETSSWHTLLHLA*GERPSFEVQVV
Trigger: GACTACTTGAACCTCAAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CCA 72 bp CAAAAGAAACATCATCCTGGCATACGCTACTTCATTTaGCTTTGGGTGAGAGGCCCAGTTTTGAGGTTCAAG +
Preference number: 6 (lower is better)
Translates to: QKKHHPGIRYFI*LWVRGPVLRFK
Trigger: CTTGAACCTCAAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS CAA 72 bp CATCCAGGACTCAGAGTCAGCCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTCCTCCAGCAAATCAAA +
Preference number: 6 (lower is better)
Translates to: HPGLRVSLLRTW*DFAFNVLQQIK
Trigger: TTTGATTTGCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTCTCAACAGGCTGACTCTGAGTCCTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429133.5
CDS CAA 72 bp CCAAAAGAAACATCATCCTGGCATACGCTACTTCATTaGGCTTTGGGTGAGAGGCCCAGTTTTGAGGTTCAA +
Preference number: 6 (lower is better)
Translates to: PKETSSWHTLLH*ALGERPSFEVQ
Trigger: TTGAACCTCAAAACTGGGCCTCTCACCCAAAGCCAAATGAAGTAGCGTATGCCAGGATGATGTTTCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485763.1
CDS GCA 72 bp CAAGTCTTCAAGGGTGTCTGTCTTCTCATCTTTCTTTaGCAAGCTCATGGAGTCAATCAAAGCATCAACAGC +
Preference number: 6 (lower is better)
Translates to: QVFKGVCLLIFL*QAHGVNQSINS
Trigger: GCTGTTGATGCTTTGATTGACTCCATGAGCTTGGCAAAGAAAGATGAGAAGACAGACACCCTTGAAGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CCA 72 bp TGGCAGAAAAAGGATACAGTCAGCCTGTTGAGAACCTaGTTGGATTTTGCTTTCAATGTCCTCCAGCAAATC +
Preference number: 6 (lower is better)
Translates to: WQKKDTVSLLRT*LDFAFNVLQQI
Trigger: GATTTGCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTCTCAACAGGCTGACTGTATCCTTTTTCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476360.1
CDS CAA 90 bp AAGCTCTGTGCAGCAGACACTGAAATAATCTCTGAAATCGAGGATTaGGGATTTTGGTGGTTGGAAACAAGTCTTCAAGGGTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: KLCAADTEIISEIED*GFWWLETSLQGCLS
Trigger: AGACAGACACCCTTGAAGACTTGTTTCCAACCACCAAAATCCCAAATCCTCGATTTCAGAGATTATTTCAGTGTCTGCTGCACAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
CDS GCA 72 bp ACTTCTTTCCTATTGTTTCATGTTGAATCACATCCATaGTCACGATTAGTGCATCCAGGACTCAGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: TSFLLFHVESHP*SRLVHPGLRVS
Trigger: GCTGACTCTGAGTCCTGGATGCACTAATCGTGAGCATGGATGTGATTCAACATGAAACAATAGGAAAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429133.5
CDS CCA 72 bp CCTTGTTCTCAGCAAACACCTGTCGCTGTACAAACATaGTTATCACCTTCTTTGCTTGTTCAAATGGGGATT +
Preference number: 6 (lower is better)
Translates to: PCSQQTPVAVQT*LSPSLLVQMGI
Trigger: AATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGTTTGCTGAGAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 72 bp ACACCTGTCGCTGTACAAACATGGTTATCACCTTCTTaGCTTGTTCAAATGGGGATTCTATACCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: TPVAVQTWLSPS*LVQMGILYQEW
Trigger: CCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 90 bp AGCAAACACCTGTCGCTGTACAAACATGGTTATCACCTTCTTTGCTaGTTCAAATGGGGATTCTATACCAGGAATGGAGTTACTCATGGT +
Preference number: 6 (lower is better)
Translates to: SKHLSLYKHGYHLLC*FKWGFYTRNGVTHG
Trigger: ACCATGAGTAACTCCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 90 bp TCTCAGCAAACACCTGTCGCTGTACAAACATGGTTATCACCTTCTTaGCTTGTTCAAATGGGGATTCTATACCAGGAATGGAGTTACTCA +
Preference number: 6 (lower is better)
Translates to: SQQTPVAVQTWLSPS*LVQMGILYQEWSYS
Trigger: TGAGTAACTCCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAGGTGTTTGCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS TCA 72 bp TCAAGGATGAAAACATGTATTGCCGCAAGTCTTCCATaGAAGGCAGCTGCACATACACTAAACACTCATAGT +
Preference number: 6 (lower is better)
Translates to: SRMKTCIAASLP*KAAAHTLNTHS
Trigger: ACTATGAGTGTTTAGTGTATGTGCAGCTGCCTTTCATGGAAGACTTGCGGCAATACATGTTTTCATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CAA 72 bp CTGTCGCTGTACAAACATGGTTATCACCTTCTTTGCTaGTTCAAATGGGGATTCTATACCAGGAATGGAGTT +
Preference number: 6 (lower is better)
Translates to: LSLYKHGYHLLC*FKWGFYTRNGV
Trigger: AACTCCATTCCTGGTATAGAATCCCCATTTGAACAAGCAAAGAAGGTGATAACCATGTTTGTACAGCGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000417391.1
ENST00000429133.5
ENST00000476360.1
CDS CAA 72 bp CAGAAAAAGGATACAGTCAGCCTGTTGAGAACCTGGTaGGATTTTGCTTTCAATGTCCTCCAGCAAATCAAA +
Preference number: 6 (lower is better)
Translates to: QKKDTVSLLRTW*DFAFNVLQQIK
Trigger: TTTGATTTGCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTCTCAACAGGCTGACTGTATCCTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476360.1
CDS CCA 72 bp AACAAGAGTGATGATCCCTTAAAATTAGGGGACCTGTaGAGTAAACTGGAAATCTCACTTTGGGTATCAATC +
Preference number: 6 (lower is better)
Translates to: NKSDDPLKLGDL*SKLEISLWVSI
Trigger: GATTGATACCCAAAGTGAGATTTCCAGTTTACTCCACAGGTCCCCTAATTTTAAGGGATCATCACTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460284.5
CDS CAA 72 bp ATAGTTATGCTTGATATGAGGAAAAGCCACGCCGACTaGAGGATTAGCTCTTTTGTCATAAGCATATCGAAC +
Preference number: 6 (lower is better)
Translates to: IVMLDMRKSHAD*RISSFVISISN
Trigger: GTTCGATATGCTTATGACAAAAGAGCTAATCCTCAAGTCGGCGTGGCTTTTCCTCATATCAAGCATAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CAA 90 bp AAATCCCAAAACAGAGAAGCACTTCCCCTCCGATTTATATTTCATTaGTTCCTCATCCACTTTAGAGAAAGGAACTATATCACTTCCATA +
Preference number: 6 (lower is better)
Translates to: KSQNREALPLRFIFH*FLIHFRERNYITSI
Trigger: TATGGAAGTGATATAGTTCCTTTCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAGGGGAAGTGCTTCTCTGTTTTGGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392132.7
ENST00000392133.7
ENST00000460284.5
ENST00000471649.1
CDS CCA 72 bp TTATGTCATTTAATAGTATCTAGAACCCATTCTTGGTaGCCACAGTCCATTCTTAAATATGAAGCGAACCAT +
Preference number: 6 (lower is better)
Translates to: LCHLIVSRTHSW*PQSILKYEANH
Trigger: ATGGTTCGCTTCATATTTAAGAATGGACTGTGGCCACCAAGAATGGGTTCTAGATACTATTAAATGACATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460284.5
CDS CCA 72 bp AAATTATGTCATTTAATAGTATCTAGAACCCATTCTTaGTGGCCACAGTCCATTCTTAAATATGAAGCGAAC +
Preference number: 6 (lower is better)
Translates to: KLCHLIVSRTHS*WPQSILKYEAN
Trigger: GTTCGCTTCATATTTAAGAATGGACTGTGGCCACCAAGAATGGGTTCTAGATACTATTAAATGACATAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460284.5