Pregenerated sensors for XRCC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000152422Ensembl transcript IDs: ENST00000282268.7, ENST00000338635.10, ENST00000396027.9, ENST00000509268.1, ENST00000511817.1, ENST00000542685.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGGTAATAGCGGCTGCTaGCTTGAAATTCTCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: FVLFSKSSQTGCWTAITYGNSGC*LEILLF Trigger: AAAAAGGAGAATTTCAAGTCAGCAGCCGCTATTACC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGGTAATAGCGGCTGCTaGCTTGAAATTCTCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPRQDVGQLSHIICVNEYGNSGC*LEILLF Trigger: AAAAAGGAGAATTTCAAGTCAGCAGCCGCTATTACC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGGTAATAGCGGCTGCTaGCTTGAAATTCTCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: CFQNLPRQDVGQLSHIICGNSGC*LEILLF Trigger: AAAAAGGAGAATTTCAAGTCAGCAGCCGCTATTACC...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| 3UTR-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATATAGCGGCTGCTGACTaGAAATTCTCCTTTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FVLFSKSSQTGCWTAITYIAAAD*KFSFFI Trigger: AATGAAAAAGGAGAATTTCAAGTCAGCAGCCGCTAT...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATATAGCGGCTGCTGACTaGAAATTCTCCTTTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LPRQDVGQLSHIICVNEYIAAAD*KFSFFI Trigger: AATGAAAAAGGAGAATTTCAAGTCAGCAGCCGCTAT...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGATCCTACCTCTCCGTaGCTCTACTTCCGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYDPTSP*LYFRYL Trigger: AAGATACCGGAAGTAGAGTCACGGAGAGGTAGGATC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282268.7 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTGTCCCAGTCCATGCTaGATGACCATCAGTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYCPSPC*MTISKC Trigger: ACACTTACTGATGGTCATTCAGCATGGACTGGGACA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAGGTTTTGCAACCAATaGGAGTATCAGCTACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYRFCNQ*EYQLLP Trigger: CGGAAGTAGCTGATACTCTCATTGGTTGCAAAACCT...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000282268.7 ENST00000338635.10 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTGTCCCAGTCCATGCTaGATGACCATCAGTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYCPSPC*MTISKC Trigger: ACACTTACTGATGGTCATTCAGCATGGACTGGGACA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATCTTAATACCTCTCCGTaGCTCTACTTCCGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYLNTSP*LYFRYL Trigger: AAGATACCGGAAGTAGAGTCACGGAGAGGTATTAAG...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338635.10 ENST00000396027.9 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATACTCTCATCATAGACTaGATCTCGGTCAGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYTLIID*ISVSSH Trigger: ATGACTGCTGACCGAGATCCAGTCTATGATGAGAGT...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATAGGTTTTGCAACCAATaGGAGTATCAGCTACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYRFCNQ*EYQLLP Trigger: CGGAAGTAGCTGATACTCTCATTGGTTGCAAAACCT...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282268.7 ENST00000338635.10 |
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| CDS-3UTR TCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTGTCCCAGTCCATGCTaGATGACCATCAGTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICCPSPC*MTISKC Trigger: ACACTTACTGATGGTCATTCAGCATGGACTGGGACA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTTCTTGGGAAATCTCTaGTTCAGAAACTGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYFLGNL*FRNCPS Trigger: ACTGGGACAGTTTCTGAATCAGAGATTTCCCAAGAA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATCTTAATACCTCTCCGTaGCTCTACTTCCGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYLNTSP*LYFRYL Trigger: AAGATACCGGAAGTAGAGTCACGGAGAGGTATTAAG...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338635.10 ENST00000396027.9 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATAGAGGTCTTCTGGGCTaGTGTTTCTCAGAGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYRGLLG*CFSEFL Trigger: TAGAAACTCTGAGAAACAGCAGCCCAGAAGACCTCT...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGCAGGTGCTCATTTTTaGCTTGATTTTCTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYAGAHF*LDFLQW Trigger: CCATTGCAGAAAATCAAGCCAAAAATGAGCACCTGC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATACTCTCATCATAGACTaGATCTCGGTCAGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYTLIID*ISVSSH Trigger: ATGACTGCTGACCGAGATCCAGTCTATGATGAGAGT...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATCCAGTCCATGCTGAATaGCCATCAGTAAGTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYPVHAE*PSVSVI Trigger: TATTACACTTACTGATGGTCATTCAGCATGGACTGG...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTTCTTGGGAAATCTCTaGTTCAGAAACTGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYFLGNL*FRNCPS Trigger: ACTGGGACAGTTTCTGAATCAGAGATTTCCCAAGAA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTGCTCATTTTTGGCTTaGTTTTCTGCAATGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYCSFLA*FSAMVS Trigger: GGACACCATTGCAGAAAATCAAGCCAAAAATGAGCA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAGACATGTTTTCAGCTaGGATGTGCTCCTTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYRHVFS*DVLLFR Trigger: TCTAAAAAGGAGCACATCTCAGCTGAAAACATGTCT...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTTTCCCTTTTTCCATTaGCATGTCATCAGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYFPFFH*HVISFL Trigger: CAAGAAGCTGATGACATGGCAATGGAAAAAGGGAAA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGCAGGTGCTCATTTTTaGCTTGATTTTCTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYAGAHF*LDFLQW Trigger: CCATTGCAGAAAATCAAGCCAAAAATGAGCACCTGC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTACTCTCATCATAGACTaGATCTCGGTCAGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICTLIID*ISVSSH Trigger: ATGACTGCTGACCGAGATCCAGTCTATGATGAGAGT...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATCCAGAGAGATCAGTTTaGTTTTCACTTTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYPERSV*FSLSSS Trigger: TGATGAGGAAAGTGAAAACCAAACTGATCTCTCTGG...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTCCCAGACAGGATGTTaGACAGCTATCACATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYSQTGC*TAITYN Trigger: ATTATATGTGATAGCTGTCCAACATCCTGTCTGGGA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTCCAGTCCATGCTGAATaGCCATCAGTAAGTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICPVHAE*PSVSVI Trigger: TATTACACTTACTGATGGTCATTCAGCATGGACTGG...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTGCTCATTTTTGGCTTaGTTTTCTGCAATGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICCSFLA*FSAMVS Trigger: GGACACCATTGCAGAAAATCAAGCCAAAAATGAGCA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATAGACATGTTTTCAGCTaGGATGTGCTCCTTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYRHVFS*DVLLFR Trigger: TCTAAAAAGGAGCACATCTCAGCTGAAAACATGTCT...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTTTGGCTTGATTTTCTaGAATGGTGTCCAAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYFGLIF*NGVQAI Trigger: TATTGCTTGGACACCATTGCAGAAAATCAAGCCAAA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATCATTTCAGAACAGATTaGAGTTTCCCCTTCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYHFRTD*SFPFLF Trigger: AAACAAGAAGGGGAAACTGCAATCTGTTCTGAAATG...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATCCTTTTTCTACTTGGTaGAATATCAGTGACATCAAG | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYPFSTW*NISDIK Trigger: CTTGATGTCACTGATATTGCACCAAGTAGAAAAAGG...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGTCCCAAGATTTCTTTaGATTCGCTGTCTCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYVPRFL*IRCLLF Trigger: AAAAAGGAGACAGCGAATGCAAAGAAATCTTGGGAC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGGTTCAGAAACAAGGTaGATTCTGCTTATTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYGSETR*ILLIFL Trigger: GAGAAAAATAAGCAGAATCCACCTTGTTTCTGAACC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGAAAATGAGTTATACTaGGTTCAGAAACAAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYENELY*VQKQGG Trigger: TCCACCTTGTTTCTGAACCCAGTATAACTCATTTTC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTCTCCTTTTTCTACTTaGTGCAATATCAGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: FVLFSKSSQTGCWTAITYSPFST*CNISDI Trigger: GATGTCACTGATATTGCACCAAGTAGAAAAAGGAGA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTCCCAGACAGGATGTTaGACAGCTATCACATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYSQTGC*TAITYN Trigger: ATTATATGTGATAGCTGTCCAACATCCTGTCTGGGA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTAGACATGTTTTCAGCTaGGATGTGCTCCTTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICRHVFS*DVLLFR Trigger: TCTAAAAAGGAGCACATCTCAGCTGAAAACATGTCT...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTTTGGCTTGATTTTCTaGAATGGTGTCCAAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYFGLIF*NGVQAI Trigger: TATTGCTTGGACACCATTGCAGAAAATCAAGCCAAA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATCCTTTTTCTACTTGGTaGAATATCAGTGACATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYPFSTW*NISDIK Trigger: CTTGATGTCACTGATATTGCACCAAGTAGAAAAAGG...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTCCCAAGATTTCTTTaGATTCGCTGTCTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICVPRFL*IRCLLF Trigger: AAAAAGGAGACAGCGAATGCAAAGAAATCTTGGGAC...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGGTTCAGAAACAAGGTaGATTCTGCTTATTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYGSETR*ILLIFL Trigger: GAGAAAAATAAGCAGAATCCACCTTGTTTCTGAACC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGAAAATGAGTTATACTaGGTTCAGAAACAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYENELY*VQKQGG Trigger: TCCACCTTGTTTCTGAACCCAGTATAACTCATTTTC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTCCAGAGAGATCAGTTTaGTTTTCACTTTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICPERSV*FSLSSS Trigger: TGATGAGGAAAGTGAAAACCAAACTGATCTCTCTGG...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTCTCCTTTTTCTACTTaGTGCAATATCAGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQDVGQLSHIICVNEYSPFST*CNISDI Trigger: GATGTCACTGATATTGCACCAAGTAGAAAAAGGAGA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTCCCAGACAGGATGTTaGACAGCTATCACATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICSQTGC*TAITYN Trigger: ATTATATGTGATAGCTGTCCAACATCCTGTCTGGGA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR GCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTTTGGCTTGATTTTCTaGAATGGTGTCCAAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICFGLIF*NGVQAI Trigger: TATTGCTTGGACACCATTGCAGAAAATCAAGCCAAA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGGTTCAGAAACAAGGTaGATTCTGCTTATTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFQNLPRQDVGQLSHIICGSETR*ILLIFL Trigger: GAGAAAAATAAGCAGAATCCACCTTGTTTCTGAACC...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS GCA 90 bp | CCTCCGGAGGCTCGAAGGGAAGATCAGTTTCCTTGGCTTTTCCACTaGCTAGAGCTTCAGTTCTTGGATCTGTTGGCTCACGTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPEARREDQFPWLFH*LELQFLDLLAHVPP Trigger: AGGAGGAACGTGAGCCAACAGATCCAAGAACTGAAGCTCTAGGCAGTGGAAAAGCCAAGGAAACTGATCTTCCCTTCGAGCCTCCGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542685.5 |
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| CDS CCA 90 bp | ATCAGTTTGGTTTTCACTTTCCTCATCAGTACTCTCATCATAGACTaGATCTCGGTCAGCAGTCATTTCAGAACAGATTGCAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLVFTFLISTLIID*ISVSSHFRTDCSFP Trigger: GGGGAAACTGCAATCTGTTCTGAAATGACTGCTGACCGAGATCCAGTCTATGATGAGAGTACTGATGAGGAAAGTGAAAACCAAACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000509268.1 ENST00000511817.1 ENST00000542685.5 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATCCCAGAGAGATCAGTTaGGTTTTCACTTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYPREIS*VFTFLI Trigger: GATGAGGAAAGTGAAAACCAAACTGATCTCTCTGGG...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAGGCTTTTCCTTTTCTaGAAGCTGATTCTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYRLFLF*KLILLR Trigger: CCTCAGGAGAATCAGCTTCAAGAAAAGGAAAAGCCT...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000282268.7 ENST00000396027.9 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATGTTTCCCCTTCTTGTTaGATGTCCTTTTCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYVSPSC*MSFSRS Trigger: AGAACGAGAAAAGGACATCAAACAAGAAGGGGAAAC...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTGTCCCAAGATTTCTTaGCATTCGCTGTCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYCPKIS*HSLSPF Trigger: AAAAGGAGACAGCGAATGCAAAGAAATCTTGGGACA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTCACAGATCAAGGTTTaGCAACCAATGAGAGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYSQIKV*QPMRVS Trigger: TGATACTCTCATTGGTTGCAAAACCTTGATCTGTGA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000282268.7 ENST00000338635.10 |
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| CDS-3UTR CAA 90 bp | TTTGTCCTGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATTCAACTTTCTCTAGGTaGAAGGAACCAAGTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVLFSKSSQTGCWTAITYSTFSR*KEPSLN Trigger: ATTCAGACTTGGTTCCTTCAACCTAGAGAAAGTTGA...ATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACAGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATGTGCTCATTTTTGGCTaGATTTTCTGCAATGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRQDVGQLSHIICVNEYVLIFG*IFCNGV Trigger: GACACCATTGCAGAAAATCAAGCCAAAAATGAGCAC...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTCCCAGAGAGATCAGTTaGGTTTTCACTTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICPREIS*VFTFLI Trigger: GATGAGGAAAGTGAAAACCAAACTGATCTCTCTGGG...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTGTCCCAAGATTTCTTaGCATTCGCTGTCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPRQDVGQLSHIICVNEYCPKIS*HSLSPF Trigger: AAAAGGAGACAGCGAATGCAAAGAAATCTTGGGACA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTCAACTTTCTCTAGGTaGAAGGAACCAAGTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPRQDVGQLSHIICVNEYSTFSR*KEPSLN Trigger: ATTCAGACTTGGTTCCTTCAACCTAGAGAAAGTTGA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTTTCCCCTTCTTGTTaGATGTCCTTTTCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICVSPSC*MSFSRS Trigger: AGAACGAGAAAAGGACATCAAACAAGAAGGGGAAAC...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTGTGAATGAATATTCATTTCAGAACAGATaGCAGTTTCCCCTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPRQDVGQLSHIICVNEYSFQNR*QFPLLV Trigger: AACAAGAAGGGGAAACTGCAATCTGTTCTGAAATGA...ATATTCATTCACACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTGTCCCAAGATTTCTTaGCATTCGCTGTCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICCPKIS*HSLSPF Trigger: AAAAGGAGACAGCGAATGCAAAGAAATCTTGGGACA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTCACAGATCAAGGTTTaGCAACCAATGAGAGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICSQIKV*QPMRVS Trigger: TGATACTCTCATTGGTTGCAAAACCTTGATCTGTGA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000282268.7 ENST00000338635.10 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTTCATTTCAGAACAGATaGCAGTTTCCCCTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICSFQNR*QFPLLV Trigger: AACAAGAAGGGGAAACTGCAATCTGTTCTGAAATGA...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTATAGCGGCTGCTGACTaGAAATTCTCCTTTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICIAAAD*KFSFFI Trigger: AATGAAAAAGGAGAATTTCAAGTCAGCAGCCGCTAT...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000511817.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAATCTTCCCAGACAGGATGTTGGACAGCTATCACATATAATATGTAGAATTTTCCTTTTCTaGAAGCTGATTCTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFQNLPRQDVGQLSHIICRIFLF*KLILLR Trigger: CCTCAGGAGAATCAGCTTCAAGAAAAGGAAAATTCT...ACATATTATATGTGATAGCTGTCCAACATCCTGTCTGGGAAGATTTTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000338635.10 ENST00000511817.1 |
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| CDS TCA 72 bp | AACGCCCGCTTTCACAGATCAAGGTTTTGCAACCAATaGGAGTATCAGCTACTTCCGCCGGCCTGCGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: NARFHRSRFCNQ*EYQLLPPACGT Trigger: CGTCCCGCAGGCCGGCGGAAGTAGCTGATACTCTCATTGGTTGCAAAACCTTGATCTGTGAAAGCGGGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282268.7 |
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| CDS TCA 72 bp | AAAGAGGCAGCCCCACTTCCGGATCCTACCTCTCCGTaGCTCTACTTCCGGTATCTTCCAAAACGCCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KEAAPLPDPTSP*LYFRYLPKRPL Trigger: AAGCGGGCGTTTTGGAAGATACCGGAAGTAGAGTCACGGAGAGGTAGGATCCGGAAGTGGGGCTGCCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282268.7 |
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| CDS CAA 72 bp | ACTCCCTCCGGAGGCTCGAAGGGAAGATCAGTTTCCTaGGCTTTTCCACTGCCTAGAGCTTCAGTTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPSGGSKGRSVS*AFPLPRASVLG Trigger: TCCAAGAACTGAAGCTCTAGGCAGTGGAAAAGCCAAGGAAACTGATCTTCCCTTCGAGCCTCCGGAGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542685.5 |
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| CDS CAA 90 bp | TACTTCCGGTATCTTCCAAAACGCCCGCTTTCACAGATCAAGGTTTaGCAACCAATGAGAGTATCAGCTACTTCCGCCGGCCTGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YFRYLPKRPLSQIKV*QPMRVSATSAGLRD Trigger: GTCCCGCAGGCCGGCGGAAGTAGCTGATACTCTCATTGGTTGCAAAACCTTGATCTGTGAAAGCGGGCGTTTTGGAAGATACCGGAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282268.7 |
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| CDS CAA 72 bp | TATCTTCCAAAACGCCCGCTTTCACAGATCAAGGTTTaGCAACCAATGAGAGTATCAGCTACTTCCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: YLPKRPLSQIKV*QPMRVSATSAG Trigger: GCCGGCGGAAGTAGCTGATACTCTCATTGGTTGCAAAACCTTGATCTGTGAAAGCGGGCGTTTTGGAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282268.7 |
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| CDS CAA 90 bp | GAAGATCAGTTTCCTTGGCTTTTCCACTGCCTAGAGCTTCAGTTCTaGGATCTGTTGGCTCACGTTCCTCCTTATTCAAAGGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EDQFPWLFHCLELQF*DLLAHVPPYSKAAA Trigger: AGCTGCTGCCTTTGAATAAGGAGGAACGTGAGCCAACAGATCCAAGAACTGAAGCTCTAGGCAGTGGAAAAGCCAAGGAAACTGATCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542685.5 |
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| CDS CAA 90 bp | CTGATTCTCCTGAGGAGCCATTTTAGGTTCTGTCCCAAGATTTCTTaGCATTCGCTGTCTCCTTTTTCTACTTGGTGCAATATCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LILLRSHFRFCPKIS*HSLSPFSTWCNISD Trigger: GTCACTGATATTGCACCAAGTAGAAAAAGGAGACAGCGAATGCAAAGAAATCTTGGGACAGAACCTAAAATGGCTCCTCAGGAGAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000509268.1 ENST00000511817.1 ENST00000542685.5 |
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| CDS TCA 72 bp | CTTATTCAAAGGCAGCAGCTTAGCATCTTTTCTCTCTaGTTTTGCTTCCATCACACGGCCTCTTTCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LIQRQQLSIFSL*FCFHHTASFSE Trigger: TTCAGAGAAAGAGGCCGTGTGATGGAAGCAAAATCAGAGAGAAAAGATGCTAAGCTGCTGCCTTTGAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542685.5 |
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| CDS CCA 72 bp | GTTTTCACTTTCCTCATCAGTACTCTCATCATAGACTaGATCTCGGTCAGCAGTCATTTCAGAACAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFTFLISTLIID*ISVSSHFRTDC Trigger: GCAATCTGTTCTGAAATGACTGCTGACCGAGATCCAGTCTATGATGAGAGTACTGATGAGGAAAGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000509268.1 ENST00000511817.1 ENST00000542685.5 |
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| CDS CAA 72 bp | CTAATGACTTCAGCTGGGTTTTCAACTTTCTCTAGGTaGAAGGAACCAAGTCTGAATGAGACATCTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LMTSAGFSTFSR*KEPSLNETSFR Trigger: CCTGAAAGATGTCTCATTCAGACTTGGTTCCTTCAACCTAGAGAAAGTTGAAAACCCAGCTGAAGTCATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000282268.7 ENST00000338635.10 ENST00000396027.9 ENST00000509268.1 ENST00000511817.1 ENST00000542685.5 |
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| CDS CAA 72 bp | TTAAGTGTTTCAACTTCGCAACTCATCACACCTAAATaGAAATACAGACTGATGCAGGGTAATCAGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSVSTSQLITPK*KYRLMQGNQNQ Trigger: TTGGTTCTGATTACCCTGCATCAGTCTGTATTTCAATTTAGGTGTGATGAGTTGCGAAGTTGAAACACTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509268.1 |
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| CDS CAA 90 bp | AACGAAATATTAAGTGTTTCAACTTCGCAACTCATCACACCTAAATaGAAATACAGACTGATGCAGGGTAATCAGAACCAAAGAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NEILSVSTSQLITPK*KYRLMQGNQNQRVK Trigger: TTTCACTCTTTGGTTCTGATTACCCTGCATCAGTCTGTATTTCAATTTAGGTGTGATGAGTTGCGAAGTTGAAACACTTAATATTTCGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509268.1 |
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