RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XRCC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000126215

Ensembl transcript IDs: ENST00000352127.11, ENST00000553264.5, ENST00000553332.5, ENST00000553361.5, ENST00000553807.1, ENST00000554170.1, ENST00000554774.1, ENST00000554811.5, ENST00000554913.5, ENST00000554974.5, ENST00000555055.6, ENST00000555231.5, ENST00000555451.1, ENST00000555832.1, ENST00000555964.5, ENST00000556682.5, ENST00000556980.5, ENST00000557439.5

Found 749 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCAGGTGGCTGACGAGCCTGTCACGTGCCAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGTGGTGCTGGCACAGGCCACACTACT +
Preference number: 1 (lower is better)
Translates to: SQVADEPVTCQPCAA*APLTGCGAGTGHTT
Trigger: AGTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTCAGCCACCTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp GGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTaGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTG +
Preference number: 1 (lower is better)
Translates to: GRGPGLPPSCWLERG*AGRLGSRWNRSSSV
Trigger: CACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 90 bp CAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTaGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAAC +
Preference number: 1 (lower is better)
Translates to: QEPQEGRGPGLPPSC*LERGWAGRLGSRWN
Trigger: GTTCCACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 90 bp CTGACGAGCCTGTCACGTGCCAGCCCTGCGCTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCACAGGCCACACTACTAGAGACAAGG +
Preference number: 1 (lower is better)
Translates to: LTSLSRASPALPALL*PAVVLAQATLLETR
Trigger: CCTTGTCTCTAGTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 90 bp AGCCGCTGCCCTGGAAGAGCTGTGTCTGAACCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGT +
Preference number: 1 (lower is better)
Translates to: SRCPGRAVSEPGSQL*HGPGRRVLKARAPC
Trigger: ACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCAGGGCAGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp GGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTaGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTGTG +
Preference number: 1 (lower is better)
Translates to: GPRGVVLFLQWHMQL*ESQCPHAVSCSLFV
Trigger: CACAAACAGGCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 90 bp GCCCAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTaGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACAC +
Preference number: 1 (lower is better)
Translates to: AQGAGLRRNPSWASM*REEAGGSQGVTVGH
Trigger: GTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp GGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GVTTVPMGRPRHSAC*VDISACAARCVPRR
Trigger: CCTCCTGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp GGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTaGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTT +
Preference number: 1 (lower is better)
Translates to: GPWASSVLLAGERLG*KARKQVEPVKQRVF
Trigger: AAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 90 bp AAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: KGVTTVPMGRPRHSA*WVDISACAARCVPR
Trigger: CCTGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp GAGGGGGTTGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATaGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: EGVVRWESRGSPLCP*GGHATLPAGWIFQP
Trigger: AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACAACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp CGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCTCCCGGCTTCTaGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAG +
Preference number: 1 (lower is better)
Translates to: RETPIFKANSCPPGF*LSPGSSPRPAAGTQ
Trigger: CTGAGTCCCTGCGGCTGGTCTTGGGGATGAGCCTGGAGACAGCCAGAAGCCGGGAGGACAGGAGTTGGCCTTGAAAATGGGAGTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 90 bp TCTTCGGATGAGAAAGTGGAGCCGCTGCCCTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTTT +
Preference number: 1 (lower is better)
Translates to: SSDEKVEPLPWKSCV*TRLPAVPRPRQTRF
Trigger: AAAACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 90 bp GGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAGGAGGCTCTGCTTTCCAGCCAGATG +
Preference number: 1 (lower is better)
Translates to: GEATPLCLLGGYFSL*SQMCSQEALLSSQM
Trigger: CATCTGGCTGGAAAGCAGAGCCTCCTGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 90 bp CTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTaGGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCT +
Preference number: 1 (lower is better)
Translates to: LSTLESRLHLTAALP*GKRETPIFKANSCP
Trigger: AGGACAGGAGTTGGCCTTGAAAATGGGAGTCTCCCGCTTACCGCACGGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 90 bp GTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTaGCCCCACGCCGTGTCATGCAGCCTGTTTGTGAGTGTCCGCGTA +
Preference number: 1 (lower is better)
Translates to: VVLFLQWHMQLWESQ*PHAVSCSLFVSVRV
Trigger: TACGCGGACACTCACAAACAGGCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACAGGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 90 bp TCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGGAGGCTCT +
Preference number: 1 (lower is better)
Translates to: SPLCPWGGHATLPAG*IFQPVQPDVFPGGS
Trigger: AGAGCCTCCTGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp CTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGAGCTGTGTCTGAACCAGGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: LRWGSVCGHHLRMRK*SRCPGRAVSEPGSQ
Trigger: CTGGGAGCCTGGTTCAGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 90 bp TCATTGCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTaGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAG +
Preference number: 1 (lower is better)
Translates to: SLHKSDLHEAWHGGR*RMRAAPVPFLSTLE
Trigger: CTCGAGCGTGCTCAGGAACGGGACGGGAGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 90 bp AGATGTGTTCCCAGGAGGCTCTGCTTTCCAGCCAGATGTAAGGCCTaGCCACAGTGTGGGACTGGGTCTGCACAGTGTGGGACTGCAGGA +
Preference number: 1 (lower is better)
Translates to: RCVPRRLCFPARCKA*PQCGTGSAQCGTAG
Trigger: TCCTGCAGTCCCACACTGTGCAGACCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAACACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 90 bp GTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAGGCCTGGCCACAGTGTGGGACTGGG +
Preference number: 1 (lower is better)
Translates to: VDISACAARCVPRRL*FPARCKAWPQCGTG
Trigger: CCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAACACATCTGGCTGCACAGGCTGAAATATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 90 bp TGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATaGAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: WHMQLWESQCPHAVS*SLFVSVRVTFNSEL
Trigger: CAGCTCAGAATTAAAGGTTACGCGGACACTCACAAACAGGCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 90 bp TCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTaGCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: SEKHLARLRPGTYKY*LGRPHPFCGWFPSP
Trigger: TGGGGAAGGGAACCAGCCACAAAAGGGATGTGGCCTCCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 90 bp TCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTaGCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGA +
Preference number: 1 (lower is better)
Translates to: SRGLSTGVGITSEPA*RFLFKIRAFRLDPG
Trigger: TCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 90 bp CCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTTaGGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCT +
Preference number: 1 (lower is better)
Translates to: PFCVRTKLLRSIWPA*GQERINTALGGHIP
Trigger: AGGGATGTGGCCTCCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTTCTCAGAAGCTTAGTTCTGACACAGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 90 bp TTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTaGCAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGG +
Preference number: 1 (lower is better)
Translates to: FVSVRVTFNSELILL*QNFKRKEELQKWVR
Trigger: CCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAATCAGCTCAGAATTAAAGGTTACGCGGACACTCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGC +
Preference number: 2 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGPGSQL*HGPGRR
Trigger: GCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp AGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACGGCTGGCTGGGCCTGTaGGTCCAGGGCCTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: RMRAAPVPFLSTLESRLHGWLGL*VQGLGS
Trigger: GGACCCCAGGCCCTGGACCCACAGGCCCAGCCAGCC...GTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACGGGAGCCGCCCTCATTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGT +
Preference number: 2 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIQPCAA*APLTGC
Trigger: ACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACGTGCCAGCCCTGCGCTaGCTGCGCTCCTCTGACCGG +
Preference number: 2 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHVPALR*LRSSDR
Trigger: CCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCAC...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCCAGCCACACCGCTGCTaGCAGGTCAGGCCCGTGAGG +
Preference number: 2 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSQPHRC*QVRPVR
Trigger: CCTCACGGGCCTGACCTGCCAGCAGCGGTGTGGCTG...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGGGAGAGAGGCTGGGCTaGAAGGCTCGGAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQGERLG*KARKQV
Trigger: CACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCC...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATGTCACGTGCCAGCCCTaGGCTGCCTGCGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDVTCQP*AACAPL
Trigger: CAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGAC...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATGACGAGCCTGTCACGTaGCAGCCCTGCGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDDEPVT*QPCAAC
Trigger: GCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTC...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGACAGCAGCTCTTCCGTaGGGTAAGCGGGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQTAALP*GKRETP
Trigger: GGGAGTCTCCCGCTTACCGCACGGAAGAGCTGCTGT...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGCTCCGTCCTGTTGGCTaGAGAGAGGCTGGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQLRPVG*REAGLE
Trigger: TTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAG...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CAA 90 bp TCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTaGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: SGATGRSGPWASSVL*AGERLGWKARKQVE
Trigger: TTCCACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCC +
Preference number: 2 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGATIFG*ESGAAA
Trigger: GGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGC...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGC +
Preference number: 2 (lower is better)
Translates to: QGAGLRRNPSWASMWREEPGSQL*HGPGRR
Trigger: GCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: TPRARIHRDPPSSQPRILPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp TCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGGAAGAGGCTTCTGTGTCCCTaGGTATCGGGGAGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: SGPWASSVLLAGERLGWKRLLCP*VSGSVG
Trigger: GCCCACACTCCCCGATACCCAGGGACACAGAAGCCT...CTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCCCCCTCCCTTCCCCTaGCCCGCAAGGCTGGACTGT +
Preference number: 2 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCPPPFP*PARLDC
Trigger: ACAGTCCAGCCTTGCGGGCCAGGGGAAGGGAGGGGG...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGGGGCTGCACAGTCATaGGGACATCGTGAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: GATGRSGPWASSVLLAGEGAAQS*GHREAG
Trigger: GCCAGCTTCACGATGTCCCCATGACTGTGCAGCCCC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCCAGGCTCCAGCCCTaGGAATCACCTCTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPPRLQP*ESPLPK
Trigger: CTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTGGG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACGTGTTCCCAGGTGGCTaGCGAGCCTGTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHVFPGG*RACHVP
Trigger: TGGCACGTGACAGGCTCGTCAGCCACCTGGGAACAC...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp CGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTGAGGACGCTGGAGAATaGGGGCGGCTCCCGTCCCGT +
Preference number: 2 (lower is better)
Translates to: RGLSTGVGITSEPACRFLEDAGE*GRLPSR
Trigger: ACGGGACGGGAGCCGCCCTCATTCTCCAGCGTCCTC...AAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGC +
Preference number: 2 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVPGSQL*HGPGRR
Trigger: GCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGCAGGACAGGGTCCTaGAGGTGGCCCTGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: TVPMGRPRHSACWVDISACRTGS*RWPCQE
Trigger: CTCCTGGCAGGGCCACCTGCAGGACCCTGTCCTGCA...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: TVPMGRPRHSACWVDISAPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCCTCTGACCGGCTGTaGTGCTGGCACAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHSSDRL*CWHRPH
Trigger: GTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGA...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGATTTGCACGAAGCCTaGCACGGAGGACGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: GATGRSGPWASSVLLAGEDLHEA*HGGRWR
Trigger: TCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGAGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCC +
Preference number: 2 (lower is better)
Translates to: QAPALRITSPQGPAQQWGATIFG*ESGAAA
Trigger: GGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGC...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGGCTCTCCTGGACCCTaGCACTGGAGGTTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPGSPGP*HWRLVG
Trigger: TCCCACCAACCTCCAGTGTCAGGGTCCAGGAGAGCC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: SAVGTRYPASGPVPRPRELRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAATGGGGGTCAGTCTGTaGCCACCATCTTCGGATGAG +
Preference number: 2 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGMGVSL*PPSSDE
Trigger: CTCATCCGAAGATGGTGGCCACAGACTGACCCCCAT...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTGAGGGTGCCCTCCCCTaGGCTGAGGGTGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCEGALP*AEGGRG
Trigger: ACCTCTGCCACCCTCAGCCCAGGGGAGGGCACCCTC...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCCCAGGCTCCAGCCCTaGGAATCACCTCTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: RRNPSWASMWREEAGGSQPRLQP*ESPLPK
Trigger: CTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTGGG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGGGCAGGTCAGGCCCGTaGGGAGGTGGCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKGRSGP*GGGWLG
Trigger: GCCCAGCCAGCCACCTCCTCACGGGCCTGACCTGCC...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCTGTGGCCTGAGTGGTaGGGGAGTAAGGACTGCCCT +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPLWPEW*GSKDCP
Trigger: AGGGCAGTCCTTACTCCCCCACCACTCAGGCCACAG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCCACTGTGGCCTGAGTaGTGGGGGAGTAAGGACTGC +
Preference number: 2 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFPLWPE*WGSKDC
Trigger: GCAGTCCTTACTCCCCCACCACTCAGGCCACAGTGG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTTGGGTCTGCACAGTGTaGGACTGCAGGACAGGGTCC +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPWVCTV*DCRTGS
Trigger: GGACCCTGTCCTGCAGTCCCACACTGTGCAGACCCA...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGCACGGAGGACGCTaGAGAATGAGGGCGGCTCCC +
Preference number: 2 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCWHGGR*RMRAAP
Trigger: GGGAGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCA...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCAGCAGTCACTGGGCTaGGCACAGCTGGGGGATTCA +
Preference number: 2 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCQQSLG*AQLGDS
Trigger: TGAATCCCCCAGCTGTGCCCAGCCCAGTGACTGCTG...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGAGGGACTCAGGCACCTaGCAAGAGGGTGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTRDSGT*QEGALP
Trigger: GGGGAGGGCACCCTCTTGTCAGGTGCCTGAGTCCCT...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATAGAAAGTGGAGCCGCTaGCCTGGAAGAGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDRKWSR*PGRAVS
Trigger: AGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCT...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACCTGCAGCCCCACTGTaGCCTGAGTGGTGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPPAAPL*PEWWGS
Trigger: ACTCCCCCACCACTCAGGCCACAGTGGGGCTGCAGG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGTGTGGGTCCAGGGCCTaGGGTCCGGCCCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKCGSRA*GPALCG
Trigger: CCCACACAGGGCCGGACCCCAGGCCCTGGACCCACA...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CAA 90 bp GCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTaGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: ANGVEAEGESLHKSD*HEAWHGGRWRMRAA
Trigger: AGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGTGTTCCCAGGTGGCTaGCGAGCCTGTCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPVFPGG*RACHVP
Trigger: TGGCACGTGACAGGCTCGTCAGCCACCTGGGAACAC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGACTTCAGAGCCCGCCTaGCGCTTTCTTTTCAAAATT +
Preference number: 2 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQTSEPA*RFLFKI
Trigger: AATTTTGAAAAGAAAGCGGCAGGCGGGCTCTGAAGT...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGACACTGGAGGTTGGTaGGATATGCTTTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIDTGGW*DMLSPP
Trigger: AGGTGGAGAAAGCATATCCCACCAACCTCCAGTGTC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATCCCTTTTGTGGCTaGTTCCCTTCCCCACCAGTG +
Preference number: 2 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCHPFCG*FPSPPV
Trigger: CACTGGTGGGGAAGGGAACCAGCCACAAAAGGGATG...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCACCTTGTACCACACTaGAGTTTTGTGGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: TPRARIHRDPPSSQPRILHLVPH*SFVGHS
Trigger: ACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTG...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAAAGGACTGCCCTGTGTaGAGGAGGGGAGACCCTCGT +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPKDCPV*RRGDPR
Trigger: ACGAGGGTCTCCCCTCCTGCACACAGGGCAGTCCTT...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCATCTGACCGGCTGTGGTaGTGGCACAGGCCACACTAC +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPSDRLW*WHRPHY
Trigger: GTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGA...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHGYFSL*SQMCSQ
Trigger: CTGGGAACACATCTGGCTGCACAGGCTGAAATATCC...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: RRNPSWASMWREEAGGSQLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAATGGGGGTCAGTCTGTaGCCACCATCTTCGGATGAG +
Preference number: 2 (lower is better)
Translates to: QGAGLRRNPSWASMWREEMGVSL*PPSSDE
Trigger: CTCATCCGAAGATGGTGGCCACAGACTGACCCCCAT...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAACCCCCAGGCTCTCCTaGACCCTGACACTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPTPRLS*TLTLEV
Trigger: AACCTCCAGTGTCAGGGTCCAGGAGAGCCTGGGGGT...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCATGGGTCTGCACAGTGTaGGACTGCAGGACAGGGTCC +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPWVCTV*DCRTGS
Trigger: GGACCCTGTCCTGCAGTCCCACACTGTGCAGACCCA...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR TCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGACACTGGAGGTTGGTaGGATATGCTTTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFDTGGW*DMLSPP
Trigger: AGGTGGAGAAAGCATATCCCACCAACCTCCAGTGTC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCCTGACACTGGAGGTTaGTGGGATATGCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFPDTGG*WDMLSP
Trigger: TGGAGAAAGCATATCCCACCAACCTCCAGTGTCAGG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR GCA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAATGCACAAATCAGATTTaGACGAAGCCTGGCACGGAG +
Preference number: 2 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTECTNQI*TKPGTE
Trigger: CTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCA...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR GCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTTCCCAGCCACACCGCTaGTGGCAGGTCAGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFSQPHR*WQVRPV
Trigger: CACGGGCCTGACCTGCCAGCAGCGGTGTGGCTGGGA...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGACTCCCGTCCCGTTCCTaGGCACGCTCGAGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGLPSRS*ARSSPA
Trigger: GGCGGGACTCGAGCGTGCTCAGGAACGGGACGGGAG...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR TCA 90 bp TACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTGAGTGTGGGCTTCACTaGAAAGGCCAACGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: YCAYQAELYTFRGNFMACECGLH*KGQRGG
Trigger: TCCACCCCGTTGGCCTTTTCAGTGAAGCCCACACTC...ACATGCCATAAAATTCCCTCTAAAAGTGTACAGTTCGGCCTGATAGGCGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 72 bp GCTGACGAGCCTGTCACGTGCCAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGTGGTGCTGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: ADEPVTCQPCAA*APLTGCGAGTG
Trigger: GCCTGTGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp TCCCAGGTGGCTGACGAGCCTGTCACGTGCCAGCCCTaGGCTGCCTGCGCTCCTCTGACCGGCTGTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SQVADEPVTCQP*AACAPLTGCGA
Trigger: AGCACCACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTCAGCCACCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp GCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATaGAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGT +
Preference number: 3 (lower is better)
Translates to: AHGASSCSCSGT*SCGRASAPTPC
Trigger: ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 72 bp CAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTaGAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: QDPVAHGASSCS*SGTCSCGRASA
Trigger: GGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 72 bp CAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTaGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGC +
Preference number: 3 (lower is better)
Translates to: QEGRGPGLPPSC*LERGWAGRLGS
Trigger: GCTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 72 bp CTGTCACGTGCCAGCCCTGCGCTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCACAGGCCACACTACTA +
Preference number: 3 (lower is better)
Translates to: LSRASPALPALL*PAVVLAQATLL
Trigger: TAGTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 72 bp CCAGCCCAGGGGGCAGGCCTCAGACGCAACCCCAGTTaGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: PAQGAGLRRNPS*ASMWREEAGGS
Trigger: GGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 72 bp GGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTaGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGC +
Preference number: 3 (lower is better)
Translates to: GVVLFLQWHMQL*ESQCPHAVSCS
Trigger: GCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACAGGACGACGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 72 bp GTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATaGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATA +
Preference number: 3 (lower is better)
Translates to: VRWESRGSPLCP*GGHATLPAGWI
Trigger: TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CAA 90 bp AAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGGCTGAGGGGGAGTCATaGCACAAATCAGATTTGCAC +
Preference number: 3 (lower is better)
Translates to: KVGALGFLRPVGWREAGLAEGES*HKSDLH
Trigger: GTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGC...CAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 72 bp ACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCCTGTGCAGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: TTVPMGRPRHSA*WVDISACAARC
Trigger: ACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp CTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTaGGGTAAGCGGGAGACTCCCATTTTCAAGGCCAAC +
Preference number: 3 (lower is better)
Translates to: LESRLHLTAALP*GKRETPIFKAN
Trigger: GTTGGCCTTGAAAATGGGAGTCTCCCGCTTACCGCACGGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 72 bp TGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: CPWGGHATLPAG*IFQPVQPDVFP
Trigger: TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 72 bp AAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTaGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGC +
Preference number: 3 (lower is better)
Translates to: KSDLHEAWHGGR*RMRAAPVPFLS
Trigger: GCTCAGGAACGGGACGGGAGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CAA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGATTCGGGCCTTTAGATaGGATCCAGGAAAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: GATGRSGPWASSVLLAGEIRAFR*DPGKEV
Trigger: GACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAAT...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 72 bp TTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTaGCCCCACGCCGTGTCATGCAGCCTGTTTGTGAGT +
Preference number: 3 (lower is better)
Translates to: FLQWHMQLWESQ*PHAVSCSLFVS
Trigger: ACTCACAAACAGGCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR CCA 72 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTT +
Preference number: 3 (lower is better)
Translates to: TVPMGRPRHSAC*VDISACAARCV
Trigger: AACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR CCA 72 bp GGGGAGTCATTGCACAAATCAGATTTGCACGAAGCCTaGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCC +
Preference number: 3 (lower is better)
Translates to: GESLHKSDLHEA*HGGRWRMRAAP
Trigger: GGGAGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAATGACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 72 bp TCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCCCTGGAAGAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: SDGGQSVATIFG*ESGAAALEELC
Trigger: ACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp TCAGCCTGTGCAGCCAGATGTGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAGGCCTGGCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: SACAARCVPRRL*FPARCKAWPQC
Trigger: ACACTGTGGCCAGGCCTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAACACATCTGGCTGCACAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp CAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATaGAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAAT +
Preference number: 3 (lower is better)
Translates to: QLWESQCPHAVS*SLFVSVRVTFN
Trigger: ATTAAAGGTTACGCGGACACTCACAAACAGGCTGCATGACACGGCGTGGGGGCACTGGCTCTCCCACAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CAA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCATACCACACTGAAGTTTaGTGGGGCACAGTGTGTGCC +
Preference number: 3 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPYHTEV*WGTVCA
Trigger: GGCACACACTGTGCCCCACAAAACTTCAGTGTGGTA...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR-3UTR CAA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTTATGCTTTCTCCACCTaGTACCACACTGAAGTTTTG +
Preference number: 3 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPYAFST*YHTEVL
Trigger: CAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATA...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR TCA 72 bp CCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCTaGCCCCTAACCTTGCATGTGGTCACGGTGGCCGTG +
Preference number: 3 (lower is better)
Translates to: PGKEVISPGKHI*PLTLHVVTVAV
Trigger: CACGGCCACCGTGACCACATGCAAGGTTAGGGGTCAGATGTGCTTTCCTGGGGAAATGACTTCCTTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR GCA 72 bp CATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTaGCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: HLARLRPGTYKY*LGRPHPFCGWF
Trigger: GAACCAGCCACAAAAGGGATGTGGCCTCCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CAA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTGCACAAATCAGATTaGCACGAAGCCTGGCACGGA +
Preference number: 3 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTLHKSD*HEAWHG
Trigger: TCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAA...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR TCA 72 bp GTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTaGAGTTTTGTGGGGCACAGTGTGTGCCGAGGTGGG +
Preference number: 3 (lower is better)
Translates to: VGGICFLHLVPH*SFVGHSVCRGG
Trigger: CCCACCTCGGCACACACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
3UTR GCA 72 bp TTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTaGCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTG +
Preference number: 3 (lower is better)
Translates to: LSTGVGITSEPA*RFLFKIRAFRL
Trigger: CAATCTAAAGGCCCGAATTTTGAAAAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
3UTR-3UTR CAA 90 bp TACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAACGTAAAGAAGAGTaGCAAAAATGGGTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: YCAYQAELYTFRGNFMACKRKEE*QKWVRN
Trigger: GTTCCTGACCCATTTTTGCAACTCTTCTTTACGTTT...ACATGCCATAAAATTCCCTCTAAAAGTGTACAGTTCGGCCTGATAGGCGCAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGGTGCGCAGCCGCGGCTaGTGGGCCATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGVRSRG*WAMSCC
Trigger: GCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCAC...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCCCCAGCGGCCCGTGTaGTGCGCCCTGCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGPQRPV*CALLLH
Trigger: ATGGAGGAGCAGGGCGCAGCACACGGGCCGCTGGGG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGGTGCCAGCCCTGCGCTaGCTGCGCTCCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGVPALR*LRSSDR
Trigger: CCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCAC...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGAGGCCAGGGCTGAGCTaGACGCCCAGACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGRPGLS*TPRPPG
Trigger: CCCTGGGGGTCTGGGCGTCCAGCTCAGCCCTGGCCT...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGGCCTCCAGGCCTCCGTaGTGCCGCGGGAACTGCACA +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGASRPP*CRGNCT
Trigger: TGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGC...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGQPCAA*APLTGC
Trigger: ACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp TCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGGAAGGGCAGGTCAGGCCCGTaGGGAGGTGGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGPWASSVLLAGERLGWKGRSGP*GGGWLG
Trigger: GCCCAGCCAGCCACCTCCTCACGGGCCTGACCTGCC...CTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGCCRGN*TARQSC
Trigger: GCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTGCTGGGCCATGAGCTaGTGCAGGCGCTTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGCWAMS*CRRLCG
Trigger: CCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCTCCTGGGCCCTCTGTaGACATCCTCCCGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGLLGPL*TSSRGF
Trigger: GAACCCGCGGGAGGATGTGCACAGAGGGCCCAGGAG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVRQSGS*GSSWAL
Trigger: GAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGTARQS*SASWVF
Trigger: GAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGT...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTGGGCCATGAGCTGCTaGAGGCGCTTGTGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGWAMSC*RRLCGK
Trigger: CTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGTGCGCAGCCGCGGCTaGTGGGCCATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREVRSRG*WAMSCC
Trigger: GCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCAC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGACCCAGGGACTGCAGATaGCTGGCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGPRDCR*LALGAE
Trigger: CTCCGCCCCCAGGGCCAGGCATCTGCAGTCCCTGGG...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACAGCGGCCCGTGTGCTaGGCCCTGCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPQRPVC*ALLLHG
Trigger: GCCATGGAGGAGCAGGGCGCAGCACACGGGCCGCTG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACCCCAGCGGCCCGTGTaGTGCGCCCTGCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPPQRPV*CALLLH
Trigger: ATGGAGGAGCAGGGCGCAGCACACGGGCCGCTGGGG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGACCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGPRLRR*CCVGNR
Trigger: GCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGG...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPPRLRR*CCVGNR
Trigger: GCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGCCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGEPRLRR*CCVGNR
Trigger: GCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGG...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTCAGCTCACGCAGCGTaGCCCCCAGGGACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGSAHAA*PPGTAD
Trigger: ATCTGCAGTCCCTGGGGGCCACGCTGCGTGAGCTGA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGAGGCCAGGGCTGAGCTaGACGCCCAGACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRERPGLS*TPRPPG
Trigger: CCCTGGGGGTCTGGGCGTCCAGCTCAGCCCTGGCCT...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGTGGTCACGGTGGCCGTaGGGCCCCCTCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGEWSRWP*GPLPSP
Trigger: AGGGGAAGGGAGGGGGCCCCACGGCCACCGTGACCA...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIVRPAQ*CRPGAG
Trigger: GCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGAC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSVRPAQ*CRPGAG
Trigger: GCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGAC...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGGCACCCCTTCGGCACTaGTCGTGTAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGAPLRH*SCRNRR
Trigger: CCTCCTGTTCCTACACGATCAGTGCCGAAGGGGTGC...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGRQSGS*GSSWAL
Trigger: GAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAAGGCTCAGGCGCTGGTaGTGCGTGGGGAACCGCTCC +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPRLRRW*CVGNRS
Trigger: GGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCT...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACCCAGGGACTGCAGATaGCTGGCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIPRDCR*LALGAE
Trigger: CTCCGCCCCCAGGGCCAGGCATCTGCAGTCCCTGGG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCAGCGGCCCGTGTGCTaGGCCCTGCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVQRPVC*ALLLHG
Trigger: GCCATGGAGGAGCAGGGCGCAGCACACGGGCCGCTG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVPGSQL*HGPGRR
Trigger: GCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTCTGACCGGCTGTGGTaGTGGCACAGGCCACACTAC +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGSDRLW*WHRPHY
Trigger: GTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGTGCCAGCCCTGCGCTaGCTGCGCTCCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIVPALR*LRSSDR
Trigger: CCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCAC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGTCACGTGCCAGCCCTaGGCTGCCTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREVTCQP*AACAPL
Trigger: CAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGAC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGCAGATGCCTGGCCCTaGGGGCGGAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIADAWP*GRRPGC
Trigger: ACAGCCAGGCCTCCGCCCCCAGGGCCAGGCATCTGC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGCCCTCCCCTGGGCCAGCCACACCGCTGCTaGCAGGTCAGGCCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QDQPQGLRHLTRGCPPLGQPHRC*QVRPVR
Trigger: CCTCACGGGCCTGACCTGCCAGCAGCGGTGTGGCTG...GCCCAGGGGAGGGCACCCTCTTGTCAGGTGCCTGAGTCCCTGCGGCTGGTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGCCTGGCCCGCAAGGCTaGACTGTGCTGTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQPGPQG*TVLSSR
Trigger: GCGGGATGACAGCACAGTCCAGCCTTGCGGGCCAGG...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGACTGCCACCGAGTCGATaGCCACCAGGCGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGLPPSR*PPGEPC
Trigger: GCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAG...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVLPALL*PAVVLA
Trigger: TGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGAGGACGCTGGAGAATaGGGGCGGCTCCCGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSEDAGE*GRLPSR
Trigger: ACGGGACGGGAGCCGCCCTCATTCTCCAGCGTCCTC...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCTCAGGCGCTGGTGCTaGGTGGGGAACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRELRRWC*VGNRSF
Trigger: GAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAG...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGGGAAGGCGTCTTCCGTaGAGATGTAGACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGGRRLP*RCRRLQ
Trigger: CTGGAGCCGTCTACATCTGCACGGAAGACGCCTTCC...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGATGCTGGGCCATGAGCTaGTGCAGGCGCTTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGCWAMS*CRRLCG
Trigger: CCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCA...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTGTGCGCAGCCGCGGCTaGTGGGCCATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVVRSRG*WAMSCC
Trigger: GCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCAC...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCCAGGGACTGCAGATaGCTGGCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPPRDCR*LALGAE
Trigger: CTCCGCCCCCAGGGCCAGGCATCTGCAGTCCCTGGG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTGTGGCCCCCAGGGACTaGAGATGCCTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVVAPRD*RCLALG
Trigger: CCCCAGGGCCAGGCATCTGCAGTCCCTGGGGGCCAC...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGACGAGCCTGTCACGTaGCAGCCCTGCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIDEPVT*QPCAAC
Trigger: GCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGPRLRR*CCVGNR
Trigger: GCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCGCAGATGCCTGGCCCTaGGGGCGGAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILADAWP*GRRPGC
Trigger: ACAGCCAGGCCTCCGCCCCCAGGGCCAGGCATCTGC...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCAGTGTGTGCCGAGGTaGGGCCCCCGGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDQCVPR*GPREPR
Trigger: CCTTGGCTCCCGGGGGCCCCACCTCGGCACACACTG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTAGGCCAGGGCTGAGCTaGACGCCCAGACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPRPGLS*TPRPPG
Trigger: CCCTGGGGGTCTGGGCGTCCAGCTCAGCCCTGGCCT...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACAGGCCAGGGCTGAGCTaGACGCCCAGACCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHRPGLS*TPRPPG
Trigger: CCCTGGGGGTCTGGGCGTCCAGCTCAGCCCTGGCCT...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGTGGCACGGAGGACGCTaGAGAATGAGGGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KVGALGFLRPVGWREAGLWHGGR*RMRAAP
Trigger: GGGAGCCGCCCTCATTCTCCAGCGTCCTCCGTGCCA...CAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLVRPAQ*CRPGAG
Trigger: GCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGAC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAVRPAQ*CRPGAG
Trigger: GCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGAC...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGACCCAGGCTCCAGCCCTaGGAATCACCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGPRLQP*ESPLPK
Trigger: CTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTGGG...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGCTCTCCTGGACCCTaGCACTGGAGGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPGSPGP*HWRLVG
Trigger: TCCCACCAACCTCCAGTGTCAGGGTCCAGGAGAGCC...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVLPALL*PAVVLA
Trigger: TGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDLPALL*PAVVLA
Trigger: TGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTAGGCTCAGGCGCTGGTaGTGCGTGGGGAACCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVRLRRW*CVGNRS
Trigger: GGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCT...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHQLGLP*RAASGQ
Trigger: CTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTG...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVQLGLP*RAASGQ
Trigger: CTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCCAGGCCTCCGTGCTaGCGCGGGAACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHSRPPC*RGNCTA
Trigger: GGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGA...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGTGCTGCAGGCGCTTGTaGGGGAAGGCGTCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRECCRRL*GKASSV
Trigger: CACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCA...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCTCCTGGAACGTCAGTaGGCAGCCGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVLLERQ*AAAAAG
Trigger: CCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACTCCTGGAACGTCAGTaGGCAGCCGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGLLERQ*AAAAAG
Trigger: CCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCCACCAGGCGAGCCATaGCCCGAGACAGCAGTACGG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVPPGEP*PETAVR
Trigger: CCGTACTGCTGTCTCGGGGCATGGCTCGCCTGGTGG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCGTGGCCCCCAGGGACTaGAGATGCCTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAVAPRD*RCLALG
Trigger: CCCCAGGGCCAGGCATCTGCAGTCCCTGGGGGCCAC...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGGCCCCCAGGGACTaGAGATGCCTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPVAPRD*RCLALG
Trigger: CCCCAGGGCCAGGCATCTGCAGTCCCTGGGGGCCAC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCAGCGGCCCGTGTGCTaGGCCCTGCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPQRPVC*ALLLHG
Trigger: GCCATGGAGGAGCAGGGCGCAGCACACGGGCCGCTG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREQAGLL*SRHRVS
Trigger: ACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTG...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCCAGCCCTGCGCTaGCTGCGCTCCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPVPALR*LRSSDR
Trigger: CCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCAC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCGTCACGTGCCAGCCCTaGGCTGCCTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILVTCQP*AACAPL
Trigger: CAGAGGAGCGCAGGCAGCGCAGGGCTGGCACGTGAC...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGACGAGCCTGTCACGTaGCAGCCCTGCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPDEPVT*QPCAAC
Trigger: GCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCCTCCTGGGCCCTCTGTaGACATCCTCCCGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSLLGPL*TSSRGF
Trigger: GAACCCGCGGGAGGATGTGCACAGAGGGCCCAGGAG...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGGCTCTGTCACTCTCTaGGGCTTGGGGATGACCCGC +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGEGSVTL*GLGMTR
Trigger: GCGGGTCATCCCCAAGCCCCAGAGAGTGACAGAGCC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAAGCTGCAGCGCCAGCTaGGTCTTCCCTGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWISCSAS*VFPAEL
Trigger: CAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCT...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGCAGATGCCTGGCCCTaGGGGCGGAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLADAWP*GRRPGC
Trigger: ACAGCCAGGCCTCCGCCCCCAGGGCCAGGCATCTGC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCATCAGCTCACGCAGCGTaGCCCCCAGGGACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPSAHAA*PPGTAD
Trigger: ATCTGCAGTCCCTGGGGGCCACGCTGCGTGAGCTGA...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACCGTGTCAGTGGGACTaGGTCCCAGGTGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIPCQWD*VPGVPR
Trigger: GCGAGGGACACCTGGGACCCAGTCCCACTGACACGG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGTCCCAGGAAGGGAGCTaGCAGCCATTCCACAGCCCG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRESQEGS*QPFHSP
Trigger: CGGGCTGTGGAATGGCTGCCAGCTCCCTTCCTGGGA...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
3UTR CAA 72 bp ACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTaGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: TGRSGPWASSVL*AGERLGWKARK
Trigger: CTTCCGAGCCTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQVRPAQ*CRPGAG
Trigger: GCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGAC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCTGCCACCGAGTCGATaGCCACCAGGCGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVLPPSR*PPGEPC
Trigger: GCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCTCAGGCGCTGGTGCTaGGTGGGGAACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDLRRWC*VGNRSF
Trigger: GAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWITARQS*SASWVF
Trigger: GAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGT...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHCCRGN*TARQSC
Trigger: GCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCA...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDCCRGN*TARQSC
Trigger: GCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTTCCAGGCCTCCGTGCTaGCGCGGGAACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCSRPPC*RGNCTA
Trigger: GGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGA...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGCCTCCAGGCCTCCGTaGTGCCGCGGGAACTGCACA +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLASRPP*CRGNCT
Trigger: TGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCCCAGGGACTGCAGATaGCTGGCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPPRDCR*LALGAE
Trigger: CTCCGCCCCCAGGGCCAGGCATCTGCAGTCCCTGGG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGTGGCCCCCAGGGACTaGAGATGCCTGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQVAPRD*RCLALG
Trigger: CCCCAGGGCCAGGCATCTGCAGTCCCTGGGGGCCAC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGGCTCTGGAAGGCACTaGTCAGCTCACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVGSGRH*SAHAAW
Trigger: CCACGCTGCGTGAGCTGAGCAGTGCCTTCCAGAGCC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGGCTCTGGAAGGCACTaGTCAGCTCACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIGSGRH*SAHAAW
Trigger: CCACGCTGCGTGAGCTGAGCAGTGCCTTCCAGAGCC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCGTGTGCTGCGCCCTaGTCCTCCATGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDPCAAP*SSMASV
Trigger: GACAGAGGCCATGGAGGAGCAGGGCGCAGCACACGG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGACAGCAGCTCTTCCGTaGGGTAAGCGGGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGETAALP*GKRETP
Trigger: GGGAGTCTCCCGCTTACCGCACGGAAGAGCTGCTGT...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGGCTCTGTCACTCTCTaGGGCTTGGGGATGACCCGC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIGSVTL*GLGMTR
Trigger: GCGGGTCATCCCCAAGCCCCAGAGAGTGACAGAGCC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGGCTCTGTCACTCTCTaGGGCTTGGGGATGACCCGC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVGSVTL*GLGMTR
Trigger: GCGGGTCATCCCCAAGCCCCAGAGAGTGACAGAGCC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACAGCTGCAGCGCCAGCTaGGTCTTCCCTGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHSCSAS*VFPAEL
Trigger: CAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCT...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGATGCCTGGCCCTaGGGGCGGAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEADAWP*GRRPGC
Trigger: ACAGCCAGGCCTCCGCCCCCAGGGCCAGGCATCTGC...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACCACTGTGGCCTGAGTaGTGGGGGAGTAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPPLWPE*WGSKDC
Trigger: GCAGTCCTTACTCCCCCACCACTCAGGCCACAGTGG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCCACTGTGGCCTGAGTaGTGGGGGAGTAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREPLWPE*WGSKDC
Trigger: GCAGTCCTTACTCCCCCACCACTCAGGCCACAGTGG...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGCAGCCCCACTGTaGCCTGAGTGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDPAAPL*PEWWGS
Trigger: ACTCCCCCACCACTCAGGCCACAGTGGGGCTGCAGG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGATGGGTCTGCACAGTGTaGGACTGCAGGACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGWVCTV*DCRTGS
Trigger: GGACCCTGTCCTGCAGTCCCACACTGTGCAGACCCA...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGCCAGATGTAAGGCCTaGCCACAGTGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPARCKA*PQCGTG
Trigger: CCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGC...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGCCAGATGTAAGGCCTaGCCACAGTGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGARCKA*PQCGTG
Trigger: CCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGC...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTGGACACGATCACGCTaGTCACTCGTATGCCCATGT +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGWTRSR*SLVCPC
Trigger: ACATGGGCATACGAGTGACCAGCGTGATCGTGTCCA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp CAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGCCCTCCCCTGGGCAGGCTTCTGTGTCCCTaGGTATCGGGGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QDQPQGLRHLTRGCPPLGRLLCP*VSGSVG
Trigger: GCCCACACTCCCCGATACCCAGGGACACAGAAGCCT...GCCCAGGGGAGGGCACCCTCTTGTCAGGTGCCTGAGTCCCTGCGGCTGGTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp AGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACGGGGCTGCACAGTCATaGGGACATCGTGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RMRAAPVPFLSTLESRLHGAAQS*GHREAG
Trigger: GCCAGCTTCACGATGTCCCCATGACTGTGCAGCCCC...GTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACGGGAGCCGCCCTCATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp TCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGGAAGAGGCTCGGAAGCAGGTaGAACCGGTCAAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SGPWASSVLLAGERLGWKRLGSR*NRSSSV
Trigger: CACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCT...CTTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTCCAGCCAGGACCCCGTaGCCCACGGGGCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCPARTP*PTGRRP
Trigger: AGGACGACGCCCCGTGGGCCACGGGGTCCTGGCTGG...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCCCGAACCAGGGAAGTaGCAGCAGCCGAGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAPEPGK*QQPRCP
Trigger: CGGACACCTCGGCTGCTGTCACTTCCCTGGTTCGGG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCATGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIATIFG*ESGAAA
Trigger: GGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCCCAGGCTCCAGCCCTaGGAATCACCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILPRLQP*ESPLPK
Trigger: CTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTGGG...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACTGCCTGCGCTCCTCTaGCCGGCTGTGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREELPALL*PAVVLA
Trigger: TGCCAGCACCACAGCCGGTCAGAGGAGCGCAGGCAG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTGTGTTCCCAGGTGGCTaGCGAGCCTGTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVVFPGG*RACHVP
Trigger: TGGCACGTGACAGGCTCGTCAGCCACCTGGGAACAC...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVAVLSK*QTSGLE
Trigger: CTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGC...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDAVLSK*QTSGLE
Trigger: CTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGC...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTAGGCTCAGGCGCTGGTaGTGCGTGGGGAACCGCTCC +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPRLRRW*CVGNRS
Trigger: GGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCT...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEQLGLP*RAASGQ
Trigger: CTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVTARQS*SASWVF
Trigger: GAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGT...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISACCRGN*TARQSC
Trigger: GCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCA...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCCCRGN*TARQSC
Trigger: GCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCA...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCCTCCAGGCCTCCGTaGTGCCGCGGGAACTGCACA +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEASRPP*CRGNCT
Trigger: TGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGC...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGCCTCCAGGCCTCCGTaGTGCCGCGGGAACTGCACA +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQASRPP*CRGNCT
Trigger: TGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTGCTGCAGGCGCTTGTaGGGGAAGGCGTCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILCCRRL*GKASSV
Trigger: CACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTGGGCCATGAGCTGCTaGAGGCGCTTGTGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDWAMSC*RRLCGK
Trigger: CTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTTGGGCCATGAGCTGCTaGAGGCGCTTGTGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPWAMSC*RRLCGK
Trigger: CTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCA...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCTGCTGGGCCATGAGCTaGTGCAGGCGCTTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLCWAMS*CRRLCG
Trigger: CCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCA...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCTCCTGGAACGTCAGTaGGCAGCCGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQLLERQ*AAAAAG
Trigger: CCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCACAGCGGAATGGGGCTaGCACCGAGTCGATGACCAC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVTAEWG*HRVDDH
Trigger: GTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGT...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAACAGCGGAATGGGGCTaGCACCGAGTCGATGACCAC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWITAEWG*HRVDDH
Trigger: GTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGT...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGAGGCTCTGGAAGGCACTaGTCAGCTCACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGGSGRH*SAHAAW
Trigger: CCACGCTGCGTGAGCTGAGCAGTGCCTTCCAGAGCC...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCCGTGTGCTGCGCCCTaGTCCTCCATGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFPCAAP*SSMASV
Trigger: GACAGAGGCCATGGAGGAGCAGGGCGCAGCACACGG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPQAGLL*SRHRVS
Trigger: ACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEQPCAA*APLTGC
Trigger: ACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPQPCAA*APLTGC
Trigger: ACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTTGCAGGACAGGGTCCTaGAGGTGGCCCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPCRTGS*RWPCQE
Trigger: CTCCTGGCAGGGCCACCTGCAGGACCCTGTCCTGCA...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGAGGCCACGCCACTCTaGCTGCTGGGTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREEATPL*LLGGYF
Trigger: GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCAAAGGCCTGGTCTGTaGCAGGCAGCATGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVQRPGL*QAACGG
Trigger: GCCTCCACATGCTGCCTGGCACAGACCAGGCCTTTG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACAAAGGCCTGGTCTGTaGCAGGCAGCATGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIQRPGL*QAACGG
Trigger: GCCTCCACATGCTGCCTGGCACAGACCAGGCCTTTG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGCCCTCCCCTGGGCCCCCACGCCGTGTCATaGAGCCTGTTTGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QDQPQGLRHLTRGCPPLGPHAVS*SLFVSV
Trigger: GACACTCACAAACAGGCTGCATGACACGGCGTGGGG...GCCCAGGGGAGGGCACCCTCTTGTCAGGTGCCTGAGTCCCTGCGGCTGGTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCCTGAAGCAGCTCTCCTaGAACGTCAGTGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVLKQLS*NVSAQP
Trigger: CGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAG...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACTGGGGGCGGAGGCCTaGCTGTCAAATTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGLGAEA*LSNSQR
Trigger: CCGCTGTGAATTTGACAGCCAGGCCTCCGCCCCCAG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGATCAGCTCACGCAGCGTaGCCCCCAGGGACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGSAHAA*PPGTAD
Trigger: ATCTGCAGTCCCTGGGGGCCACGCTGCGTGAGCTGA...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCCGTGTCAGTGGGACTaGGTCCCAGGTGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFPCQWD*VPGVPR
Trigger: GCGAGGGACACCTGGGACCCAGTCCCACTGACACGG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCCGCCACCGTGTCAGTaGGACTGGGTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFPPPCQ*DWVPGV
Trigger: GACACCTGGGACCCAGTCCCACTGACACGGTGGCGG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCCGCCACCGTGTCAGTaGGACTGGGTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPPPPCQ*DWVPGV
Trigger: GACACCTGGGACCCAGTCCCACTGACACGGTGGCGG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCAGTGTGTGCCGAGGTaGGGCCCCCGGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVQCVPR*GPREPR
Trigger: CCTTGGCTCCCGGGGGCCCCACCTCGGCACACACTG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGTGTGTGCCGAGGTaGGGCCCCCGGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPQCVPR*GPREPR
Trigger: CCTTGGCTCCCGGGGGCCCCACCTCGGCACACACTG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAACCCCCAGGCTCTCCTaGACCCTGACACTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWITPRLS*TLTLEV
Trigger: AACCTCCAGTGTCAGGGTCCAGGAGAGCCTGGGGGT...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTCACCACTGTGCCCATaGGGAGGCCACGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILSPLCP*GGHATL
Trigger: CAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGTATTTGTCAAAGGCCTaGTCTGTGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGYLSKA*SVPGSM
Trigger: CATGCTGCCTGGCACAGACCAGGCCTTTGACAAATA...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGGGAGGAAGGTGCTGTaGACCCCACCCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPGRKVL*TPPSLS
Trigger: GGAGAGGCTGGGTGGGGTCCACAGCACCTTCCTCCC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR TCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGACCAAATCGGAGCTTCTaGAGCAGCTCTCCTGGAACG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGPNRSF*SSSPGT
Trigger: CGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGG...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCTGCCACCGAGTCGATaGCCACCAGGCGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQLPPSR*PPGEPC
Trigger: GCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACCTCTGTCACCTGGTTaGTGCACAGCACAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIPLSPG*CTAQGS
Trigger: AGAGCCCTGTGCTGTGCATCAACCAGGTGACAGAGG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGCACCCCTTCGGCACTaGTCGTGTAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPAPLRH*SCRNRR
Trigger: CCTCCTGTTCCTACACGATCAGTGCCGAAGGGGTGC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCGCACCCCTTCGGCACTaGTCGTGTAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILAPLRH*SCRNRR
Trigger: CCTCCTGTTCCTACACGATCAGTGCCGAAGGGGTGC...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCCCCAGGCTCCAGCCCTaGGAATCACCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLPRLQP*ESPLPK
Trigger: CTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTGGG...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGTGTTCCCAGGTGGCTaGCGAGCCTGTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFVFPGG*RACHVP
Trigger: TGGCACGTGACAGGCTCGTCAGCCACCTGGGAACAC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACGGCCTCCCAAATGGTaGGACCAAGAGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIRPPKW*DQECPG
Trigger: TCCTGGACACTCTTGGTCTCACCATTTGGGAGGCCG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGTCCAGGCCTCCGTGCTaGCGCGGGAACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVSRPPC*RGNCTA
Trigger: GGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGA...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGGAAGGCGTCTTCCGTaGAGATGTAGACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVGRRLP*RCRRLQ
Trigger: CTGGAGCCGTCTACATCTGCACGGAAGACGCCTTCC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGTGCTGGGCCATGAGCTaGTGCAGGCGCTTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQCWAMS*CRRLCG
Trigger: CCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCA...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCCACCAGGCGAGCCATaGCCCGAGACAGCAGTACGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQPPGEP*PETAVR
Trigger: CCGTACTGCTGTCTCGGGGCATGGCTCGCCTGGTGG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCCACCAGGCGAGCCATaGCCCGAGACAGCAGTACGG +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPPPGEP*PETAVR
Trigger: CCGTACTGCTGTCTCGGGGCATGGCTCGCCTGGTGG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCCGTGTGCTGCGCCCTaGTCCTCCATGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQPCAAP*SSMASV
Trigger: GACAGAGGCCATGGAGGAGCAGGGCGCAGCACACGG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCAGCGGCCCGTGTGCTaGGCCCTGCTCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSQRPVC*ALLLHG
Trigger: GCCATGGAGGAGCAGGGCGCAGCACACGGGCCGCTG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACCAGGCTCCCAGCTGTaGCACGGCCCAGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPPGSQL*HGPGRR
Trigger: GCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAAGAAAGTGGAGCCGCTaGCCTGGAAGAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGRKWSR*PGRAVS
Trigger: AGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCT...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTGGGGGAGTAAGGACTaGCCTGTGTGCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHWGSKD*PVCRRG
Trigger: TCCCCTCCTGCACACAGGGCAGTCCTTACTCCCCCA...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCAGCCCTGCGCTGCCTaGGCTCCTCTGACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVQPCAA*APLTGC
Trigger: ACAGCCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGTGCCAGCCCTGCGCTaGCTGCGCTCCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPVPALR*LRSSDR
Trigger: CCGGTCAGAGGAGCGCAGGCAGCGCAGGGCTGGCAC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCGACGAGCCTGTCACGTaGCAGCCCTGCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPDEPVT*QPCAAC
Trigger: GCAGGCAGCGCAGGGCTGGCACGTGACAGGCTCGTC...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGTGCAGGACAGGGTCCTaGAGGTGGCCCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQCRTGS*RWPCQE
Trigger: CTCCTGGCAGGGCCACCTGCAGGACCCTGTCCTGCA...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATACCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIPRHSA*WVDISA
Trigger: GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGG...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCAAAGGCCTGGTCTGTaGCAGGCAGCATGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDQRPGL*QAACGG
Trigger: GCCTCCACATGCTGCCTGGCACAGACCAGGCCTTTG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGCGTCGTCCTGTTCCTaGAGTGGCACATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGEASSCS*SGTCSC
Trigger: ACAACTGCATGTGCCACTGCAGGAACAGGACGACGC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPARPRG*RGWSVS
Trigger: AGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTAGCTGCAGCGCCAGCTaGGTCTTCCCTGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPSCSAS*VFPAEL
Trigger: CAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCT...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTGAAGCAGCTCTCCTaGAACGTCAGTGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPLKQLS*NVSAQP
Trigger: CGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCTGAAGCAGCTCTCCTaGAACGTCAGTGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDLKQLS*NVSAQP
Trigger: CGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCTGGGGGCGGAGGCCTaGCTGTCAAATTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISALGAEA*LSNSQR
Trigger: CCGCTGTGAATTTGACAGCCAGGCCTCCGCCCCCAG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCCGTGTCAGTGGGACTaGGTCCCAGGTGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQPCQWD*VPGVPR
Trigger: GCGAGGGACACCTGGGACCCAGTCCCACTGACACGG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCCGCCACCGTGTCAGTaGGACTGGGTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPPPPCQ*DWVPGV
Trigger: GACACCTGGGACCCAGTCCCACTGACACGGTGGCGG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGATGGGGGTCAGTCTGTaGCCACCATCTTCGGATGAG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREMGVSL*PPSSDE
Trigger: CTCATCCGAAGATGGTGGCCACAGACTGACCCCCAT...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTGTGGCCTGAGTGGTaGGGGAGTAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPLWPEW*GSKDCP
Trigger: AGGGCAGTCCTTACTCCCCCACCACTCAGGCCACAG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCACTGTGGCCTGAGTaGTGGGGGAGTAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPPLWPE*WGSKDC
Trigger: GCAGTCCTTACTCCCCCACCACTCAGGCCACAGTGG...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACCTGCAGCCCCACTGTaGCCTGAGTGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEPAAPL*PEWWGS
Trigger: ACTCCCCCACCACTCAGGCCACAGTGGGGCTGCAGG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCTCCTCTGACCGGCTGTaGTGCTGGCACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFSSDRL*CWHRPH
Trigger: GTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGA...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTGGGTCTGCACAGTGTaGGACTGCAGGACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDWVCTV*DCRTGS
Trigger: GGACCCTGTCCTGCAGTCCCACACTGTGCAGACCCA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGAGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGAGGGGGTTGTACGGTaGGAATCAAGGGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVEGVVR*ESRGSP
Trigger: TGGTGACCCCCTTGATTCCCACCGTACAACCCCCTC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCTCTGTGGGTCCAGGGCCTaGGGTCCGGCCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LFRAVSGRLPFSRPTPVLCGSRA*GPALCG
Trigger: CCCACACAGGGCCGGACCCCAGGCCCTGGACCCACA...GAGGACAGGAGTTGGCCTTGAAAATGGGAGTCTCCCGCTTACCGCACGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTCCCCCTCCCTTCCCCTaGCCCGCAAGGCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCPPPFP*PARLDC
Trigger: ACAGTCCAGCCTTGCGGGCCAGGGGAAGGGAGGGGG...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTGGAGAGAGGCTGGGCTaGAAGGCTCGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCGERLG*KARKQV
Trigger: CACCTGCTTCCGAGCCTTCCAGCCCAGCCTCTCTCC...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp AAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGCATCCCTTTTGTGGCTaGTTCCCTTCCCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KVGALGFLRPVGWREAGLHPFCG*FPSPPV
Trigger: CACTGGTGGGGAAGGGAACCAGCCACAAAAGGGATG...CAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREGWPPG*ITSQER
Trigger: TCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATC +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGRPRAR*RSGCQI
Trigger: GATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCTGCCACCGAGTCGATaGCCACCAGGCGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPLPPSR*PPGEPC
Trigger: GCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCCTCTGTCACCTGGTTaGTGCACAGCACAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVPLSPG*CTAQGS
Trigger: AGAGCCCTGTGCTGTGCATCAACCAGGTGACAGAGG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGGGAACCGCTCCTTCTaGTGGTGCAGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLGNRSF*WCSCSA
Trigger: AGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSQLGLP*RAASGQ
Trigger: CTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTTGCTGCAGGCGCTTGTaGGGGAAGGCGTCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPCCRRL*GKASSV
Trigger: CACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCA...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCTCCACATCGGCCACGTaGTCGATGAAGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVSTSAT*SMKIWL
Trigger: CAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGA...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATCCACATCGGCCACGTaGTCGATGAAGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWISTSAT*SMKIWL
Trigger: CAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGA...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCACAGCGGAATGGGGCTaGCACCGAGTCGATGACCAC +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLTAEWG*HRVDDH
Trigger: GTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGT...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGCTCTGGAAGGCACTaGTCAGCTCACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQGSGRH*SAHAAW
Trigger: CCACGCTGCGTGAGCTGAGCAGTGCCTTCCAGAGCC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQQAGLL*SRHRVS
Trigger: ACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCTGGGGGAGTAAGGACTaGCCTGTGTGCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLWGSKD*PVCRRG
Trigger: TCCCCTCCTGCACACAGGGCAGTCCTTACTCCCCCA...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTTGGGGGAGTAAGGACTaGCCTGTGTGCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPWGSKD*PVCRRG
Trigger: TCCCCTCCTGCACACAGGGCAGTCCTTACTCCCCCA...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCTGGGGGAGTAAGGACTaGCCTGTGTGCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFWGSKD*PVCRRG
Trigger: TCCCCTCCTGCACACAGGGCAGTCCTTACTCCCCCA...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCTCTGACCGGCTGTGGTaGTGGCACAGGCCACACTAC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFSDRLW*WHRPHY
Trigger: GTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGA...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCTGACCGGCTGTGGTaGTGGCACAGGCCACACTAC +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISASDRLW*WHRPHY
Trigger: GTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGA...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAG +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPREVPRRL*FPARCK
Trigger: CTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAAC...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTTTGGACCACACAGAATaGGGCACTGGCCTGGACACG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPLDHTE*GTGLDT
Trigger: CGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAA...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAARPRG*RGWSVS
Trigger: AGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGC...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCAACCGCTCCTTCTGCTaGTGCAGCTGCAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSNRSFC*CSCSAV
Trigger: TACAGCACTGCAGCTGCACCAGCAGAAGGAGCGGTT...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCCTGAAGCAGCTCTCCTaGAACGTCAGTGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLLKQLS*NVSAQP
Trigger: CGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAG...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAAAATTCACAGCGGAATaGGGCTGCCACCGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPKFTAE*GCHRVD
Trigger: ATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTT...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCTGGGGGCGGAGGCCTaGCTGTCAAATTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQLGAEA*LSNSQR
Trigger: CCGCTGTGAATTTGACAGCCAGGCCTCCGCCCCCAG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTTCAGCTCACGCAGCGTaGCCCCCAGGGACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPSAHAA*PPGTAD
Trigger: ATCTGCAGTCCCTGGGGGCCACGCTGCGTGAGCTGA...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCCGCCACCGTGTCAGTaGGACTGGGTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPPPPCQ*DWVPGV
Trigger: GACACCTGGGACCCAGTCCCACTGACACGGTGGCGG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCATGGGGGTCAGTCTGTaGCCACCATCTTCGGATGAG +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVMGVSL*PPSSDE
Trigger: CTCATCCGAAGATGGTGGCCACAGACTGACCCCCAT...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCCTGTGGCCTGAGTGGTaGGGGAGTAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLLWPEW*GSKDCP
Trigger: AGGGCAGTCCTTACTCCCCCACCACTCAGGCCACAG...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCCAAGGACCCAGAGGTaGGTGAGGAGGAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVPRTQR*VRRSRL
Trigger: CAGGCGGCTCCTCCTCACCCACCTCTGGGTCCTTGG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAATCCTCTGACCGGCTGTaGTGCTGGCACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREESSDRL*CWHRPH
Trigger: GTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGA...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGCCAGATGTAAGGCCTaGCCACAGTGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPARCKA*PQCGTG
Trigger: CCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPTLPAG*IFQPVQ
Trigger: CTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGT...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGAGGGGGTTGTACGGTaGGAATCAAGGGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPEGVVR*ESRGSP
Trigger: TGGTGACCCCCTTGATTCCCACCGTACAACCCCCTC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTTGTGGAGGCACTGAGTaGGGGGTGGAGGGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPCGGTE*GVEGVV
Trigger: TACAACCCCCTCCACCCCCCACTCAGTGCCTCCACA...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGGGCTGGCTGGGCCTGTaGGTCCAGGGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKGWLGL*VQGLGS
Trigger: GGACCCCAGGCCCTGGACCCACAGGCCCAGCCAGCC...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAGAGGGTGCCCTCCCCTaGGCTGAGGGTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTEEGALP*AEGGRG
Trigger: ACCTCTGCCACCCTCAGCCCAGGGGAGGGCACCCTC...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTCCTGTTCCTGCAGTaGCACATGCAGTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSVLFLQ*HMQLWE
Trigger: CTCCCACAACTGCATGTGCCACTGCAGGAACAGGAC...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGCCTTCTGAGTAGCTaGGATTACAAGGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGESLLSS*DYKACA
Trigger: AGCGCACGCCTTGTAATCCCAGCTACTCAGAAGGCT...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSGWPPG*ITSQER
Trigger: TCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCC...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATC +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLRPRAR*RSGCQI
Trigger: GATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCG...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEATIFG*ESGAAA
Trigger: GGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGC...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACACCTTGTACCACACTaGAGTTTTGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPHLVPH*SFVGHS
Trigger: ACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVAVLSK*QTSGLE
Trigger: CTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCAVLSK*QTSGLE
Trigger: CTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGC...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTCTGCTGGTGCAGCTaGAGTGCTGTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIFCWCS*SAVRML
Trigger: CAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAA...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISARSFCW*SCSAVR
Trigger: CCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACTCAGGCGCTGGTGCTaGGTGGGGAACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPLRRWC*VGNRSF
Trigger: GAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACCACCAGGCGAGCCATaGCCCGAGACAGCAGTACGG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPPPGEP*PETAVR
Trigger: CCGTACTGCTGTCTCGGGGCATGGCTCGCCTGGTGG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGAAGGACTGCCCTGTGTaGAGGAGGGGAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQKDCPV*RRGDPR
Trigger: ACGAGGGTCTCCCCTCCTGCACACAGGGCAGTCCTT...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAAAGGACTGCCCTGTGTaGAGGAGGGGAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEKDCPV*RRGDPR
Trigger: ACGAGGGTCTCCCCTCCTGCACACAGGGCAGTCCTT...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGTCTGACCGGCTGTGGTaGTGGCACAGGCCACACTAC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQSDRLW*WHRPHY
Trigger: GTAGTGTGGCCTGTGCCAGCACCACAGCCGGTCAGA...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGGYFSL*SQMCSQ
Trigger: CTGGGAACACATCTGGCTGCACAGGCTGAAATATCC...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGAGGCCACGCCACTCTaGCTGCTGGGTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFEATPL*LLGGYF
Trigger: GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCAAAGGCCTGGTCTGTaGCAGGCAGCATGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQQRPGL*QAACGG
Trigger: GCCTCCACATGCTGCCTGGCACAGACCAGGCCTTTG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGTGCACAAATCAGATTTaGACGAAGCCTGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: KVGALGFLRPVGWREAGLCTNQI*TKPGTE
Trigger: CTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCA...CAGCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCACGTTATGTAGGGGCTaGACAGTCATGGGGACATCG +
Preference number: 4 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSTLCRG*TVMGTS
Trigger: CGATGTCCCCATGACTGTGCAGCCCCTACATAACGT...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGGAACGTATAAATACTaGCTTGGGAGGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: GATGRSGPWASSVLLAGEGTYKY*LGRPHP
Trigger: GGGATGTGGCCTCCCAAGGCAGTATTTATACGTTCC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp CTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCTCCTATGCCAGGAAGGCTaGCCAGCCAGGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LFRAVSGRLPFSRPTPVLLCQEG*PARTPW
Trigger: CCACGGGGTCCTGGCTGGGCAGCCTTCCTGGCATAG...GAGGACAGGAGTTGGCCTTGAAAATGGGAGTCTCCCGCTTACCGCACGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATCAATTCAAAGCCTGTaGGAGGCCCGAACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWISIQSL*EARTRE
Trigger: TTCCCTGGTTCGGGCCTCCCACAGGCTTTGAATTGA...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGAATCCATTTTGTCGGTaGGCTGGCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRENPFCR*AGHQDE
Trigger: TTCATCCTGGTGGCCAGCCCACCGACAAAATGGATT...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACAATCCATTTTGTCGGTaGGCTGGCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: RMRAAPVPFLSTLESRLHNPFCR*AGHQDE
Trigger: TTCATCCTGGTGGCCAGCCCACCGACAAAATGGATT...GTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACGGGAGCCGCCCTCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTAACCGCTCCTTCTGCTaGTGCAGCTGCAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPNRSFC*CSCSAV
Trigger: TACAGCACTGCAGCTGCACCAGCAGAAGGAGCGGTT...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATAACCGCTCCTTCTGCTaGTGCAGCTGCAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDNRSFC*CSCSAV
Trigger: TACAGCACTGCAGCTGCACCAGCAGAAGGAGCGGTT...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGAGCTGCAGCGCCAGCTaGGTCTTCCCTGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTSCSAS*VFPAEL
Trigger: CAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCT...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCTGGGGGCGGAGGCCTaGCTGTCAAATTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVLGAEA*LSNSQR
Trigger: CCGCTGTGAATTTGACAGCCAGGCCTCCGCCCCCAG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILGYAKG*GNTFVP
Trigger: TGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACC...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDGYAKG*GNTFVP
Trigger: TGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACC...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACATGGGGGTCAGTCTGTaGCCACCATCTTCGGATGAG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHMGVSL*PPSSDE
Trigger: CTCATCCGAAGATGGTGGCCACAGACTGACCCCCAT...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTCCACTGTGGCCTGAGTaGTGGGGGAGTAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPPLWPE*WGSKDC
Trigger: GCAGTCCTTACTCCCCCACCACTCAGGCCACAGTGG...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTACCCCCAGGCTCTCCTaGACCCTGACACTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPTPRLS*TLTLEV
Trigger: AACCTCCAGTGTCAGGGTCCAGGAGAGCCTGGGGGT...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGTGGGTCTGCACAGTGTaGGACTGCAGGACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQWVCTV*DCRTGS
Trigger: GGACCCTGTCCTGCAGTCCCACACTGTGCAGACCCA...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGACGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGRHSAC*VDISAC
Trigger: ACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCG...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGTGTGGAGGCACTGAGTaGGGGGTGGAGGGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQCGGTE*GVEGVV
Trigger: TACAACCCCCTCCACCCCCCACTCAGTGCCTCCACA...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAATGTGGAGGCACTGAGTaGGGGGTGGAGGGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREECGGTE*GVEGVV
Trigger: TACAACCCCCTCCACCCCCCACTCAGTGCCTCCACA...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCCACAGAATGCGGCACTaGCCTGGACACGATCACGCT +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFHRMRH*PGHDHA
Trigger: AGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTG...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGGCGGGCCGTGGACTTaGAGAAGGTTTTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFGGPWT*RRFSLG
Trigger: TCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCTCAGGGACTCAGCCTaGGGTCACATAAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVLRDSA*GHIRPF
Trigger: GAAAGGCCTTATGTGACCCCAGGCTGAGTCCCTGAG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGAAGACAGCTTCCTGTaGGACGGGAGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLEDSFL*DGRKVL
Trigger: CAGCACCTTCCTCCCGTCCCACAGGAAGCTGTCTTC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACAATTCAAAGCCTCTCTaGGGCTTGGGGATGACCCGC +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHNSKPL*GLGMTR
Trigger: GCGGGTCATCCCCAAGCCCCAGAGAGGCTTTGAATT...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS-3UTR TCA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCATGTTTTTGGCTGACTTaGCTGAGGCATCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPCFWLT*LRHLLH
Trigger: GTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACA...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPGWPPG*ITSQER
Trigger: TCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCCAAATCGGAGCTTCTaGAGCAGCTCTCCTGGAACG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAPNRSF*SSSPGT
Trigger: CGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQRPRAR*RSGCQI
Trigger: GATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGCACCCCTTCGGCACTaGTCGTGTAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVAPLRH*SCRNRR
Trigger: CCTCCTGTTCCTACACGATCAGTGCCGAAGGGGTGC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGGCTCTCCTGGACCCTaGCACTGGAGGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPGSPGP*HWRLVG
Trigger: TCCCACCAACCTCCAGTGTCAGGGTCCAGGAGAGCC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCGGCTCTCCTGGACCCTaGCACTGGAGGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSGSPGP*HWRLVG
Trigger: TCCCACCAACCTCCAGTGTCAGGGTCCAGGAGAGCC...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPAVLSK*QTSGLE
Trigger: CTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTTCTGCTGGTGCAGCTaGAGTGCTGTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDFCWCS*SAVRML
Trigger: CAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTTCTGCTGGTGCAGCTaGAGTGCTGTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHFCWCS*SAVRML
Trigger: CAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAA...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGGGAACCGCTCCTTCTaGTGGTGCAGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVGNRSF*WCSCSA
Trigger: AGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSTARQS*SASWVF
Trigger: GAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGT...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSQAGLL*SRHRVS
Trigger: ACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCAGAAAGTGGAGCCGCTaGCCTGGAAGAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLRKWSR*PGRAVS
Trigger: AGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCT...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGAAGGACTGCCCTGTGTaGAGGAGGGGAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVKDCPV*RRGDPR
Trigger: ACGAGGGTCTCCCCTCCTGCACACAGGGCAGTCCTT...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVVPRRL*FPARCK
Trigger: CTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAAC...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGCCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQPRHSA*WVDISA
Trigger: GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGG...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGAGGCCACGCCACTCTaGCTGCTGGGTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEEATPL*LLGGYF
Trigger: GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTC...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTCCAACAGGCCACTCTaGATCCCCTGTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSSNRPL*IPCRPP
Trigger: GGGAGGCCGACAGGGGATGCAGAGTGGCCTGTTGGA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVARPRG*RGWSVS
Trigger: AGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAACCGCTCCTTCTGCTaGTGCAGCTGCAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFNRSFC*CSCSAV
Trigger: TACAGCACTGCAGCTGCACCAGCAGAAGGAGCGGTT...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLGYAKG*GNTFVP
Trigger: TGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTAGTCTCACCAGGAGCTaGTTAGCCCAGGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVSLTRS*LAQVMP
Trigger: TGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACT...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTAGTCTCACCAGGAGCTaGTTAGCCCAGGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPSLTRS*LAQVMP
Trigger: TGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACT...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATAGTCTCACCAGGAGCTaGTTAGCCCAGGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDSLTRS*LAQVMP
Trigger: TGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACT...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCTGTGGCCTGAGTGGTaGGGGAGTAAGGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPLWPEW*GSKDCP
Trigger: AGGGCAGTCCTTACTCCCCCACCACTCAGGCCACAG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGACACTGGAGGTTGGTaGGATATGCTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVDTGGW*DMLSPP
Trigger: AGGTGGAGAAAGCATATCCCACCAACCTCCAGTGTC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTCCTCTGACCGGCTGTaGTGCTGGCACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSSSDRL*CWHRPH
Trigger: GTGTGGCCTGTGCCAGCACCACAGCCGGTCAGAGGA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGAACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGTLPAG*IFQPVQ
Trigger: CTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGT...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVTLPAG*IFQPVQ
Trigger: CTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGT...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATACTCTGCCTGCTGGGTaGATATTTCAGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDTLPAG*IFQPVQ
Trigger: CTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGT...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPRHSAC*VDISAC
Trigger: ACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTCACCACTGTGCCCATaGGGAGGCCACGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSSPLCP*GGHATL
Trigger: CAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCATCACCACTGTGCCCATaGGGAGGCCACGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPSPLCP*GGHATL
Trigger: CAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGA...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTGATTTGCACGAAGCCTaGCACGGAGGACGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGLSTGVGITSEPACRFLDLHEA*HGGRWR
Trigger: TCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATC...AAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTCTCCGTCCTGTTGGCTaGAGAGAGGCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCLRPVG*REAGLE
Trigger: TTCCAGCCCAGCCTCTCTCCAGCCAACAGGACGGAG...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: SAVGTRYPASGPVPRPRENGCKF*GTRLQF
Trigger: GAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATT...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFGWPPG*ITSQER
Trigger: TCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPGWPPG*ITSQER
Trigger: TCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCC...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCTGGAAGAGCTGTGTCTaGACCAGGCTCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPWKSCV*TRLPAV
Trigger: CACAGCTGGGAGCCTGGTTCAGACACAGCTCTTCCA...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGAGGGACTCAGGCACCTaGCAAGAGGGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKRDSGT*QEGALP
Trigger: GGGGAGGGCACCCTCTTGTCAGGTGCCTGAGTCCCT...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTAGCATCTGGCCCGCTTaGGGCCAGGAACGTATAAAT +
Preference number: 4 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCSIWPA*GQERIN
Trigger: ATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCT...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGCTCAGGCGCTGGTGCTaGGTGGGGAACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SEKHLARLRPGTYKYCLGLRRWC*VGNRSF
Trigger: GAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAG...CCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGTGCGCAGCCGCGGCTaGTGGGCCATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAVRSRG*WAMSCC
Trigger: GCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCAC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCCCCTGCCAGGAGTCCTaGCATATCCCTACCAGAATA +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLPCQES*HIPTRI
Trigger: TATTCTGGTAGGGATATGGCAGGACTCCTGGCAGGG...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTCCCTGCCAGGAGTCCTaGCATATCCCTACCAGAATA +
Preference number: 4 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPPCQES*HIPTRI
Trigger: TATTCTGGTAGGGATATGGCAGGACTCCTGGCAGGG...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAG +
Preference number: 4 (lower is better)
Translates to: HHCAHGEATPLCLLGGYFVPRRL*FPARCK
Trigger: CTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAAC...GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPGYFSL*SQMCSQ
Trigger: CTGGGAACACATCTGGCTGCACAGGCTGAAATATCC...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPPRHSA*WVDISA
Trigger: GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGAAATCCATTTTGTCGGTaGGCTGGCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: QAPALRITSPQGPAQQWGNPFCR*AGHQDE
Trigger: TTCATCCTGGTGGCCAGCCCACCGACAAAATGGATT...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPARPRG*RGWSVS
Trigger: AGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTARPRG*RGWSVS
Trigger: AGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGC...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTGCTCGATGAAGATCTaGCTGCCAAATCGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPRARIHRDPPSSQPRILCSMKI*LPNRSF
Trigger: GAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCACAGTGTGTGCCGAGGTaGGGCCCCCGGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAQCVPR*GPREPR
Trigger: CCTTGGCTCCCGGGGGCCCCACCTCGGCACACACTG...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTGACACTGGAGGTTaGTGGGATATGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDPDTGG*WDMLSP
Trigger: TGGAGAAAGCATATCCCACCAACCTCCAGTGTCAGG...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCCTGACACTGGAGGTTaGTGGGATATGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVPDTGG*WDMLSP
Trigger: TGGAGAAAGCATATCCCACCAACCTCCAGTGTCAGG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGCCACAGTGTGGGACTaGGTCTGCACAGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPATVWD*VCTVWD
Trigger: GTCCCACACTGTGCAGACCCAGTCCCACACTGTGGC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGCCAGATGTAAGGCCTaGCCACAGTGTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPARCKA*PQCGTG
Trigger: CCCAGTCCCACACTGTGGCCAGGCCTTACATCTGGC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTGTTTTTGGCTGACTTaGCTGAGGCATCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDCFWLT*LRHLLH
Trigger: GTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCCAAATCGGAGCTTCTaGAGCAGCTCTCCTGGAACG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVPNRSF*SSSPGT
Trigger: CGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCACCTTGTACCACACTaGAGTTTTGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAHLVPH*SFVGHS
Trigger: ACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPRSFCW*SCSAVR
Trigger: CCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKTARQS*SASWVF
Trigger: GAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGT...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGTCCAGGCCTCCGTGCTaGCGCGGGAACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGSRPPC*RGNCTA
Trigger: GGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGA...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCTCCTGGAACGTCAGTaGGCAGCCGCGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGLLERQ*AAAAAG
Trigger: CCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACCACGCCACTCTGCCTaGTGGGTGGATATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPPRHSA*WVDISA
Trigger: GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCGCTGGTCACTCGTATaGCCATGTTCAGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPRWSLV*PCSACS
Trigger: TGAGCAGGCTGAACATGGGCATACGAGTGACCAGCG...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTAAATTCACAGCGGAATaGGGCTGCCACCGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPKFTAE*GCHRVD
Trigger: ATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTT...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCCCTGACACTGGAGGTTaGTGGGATATGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAPDTGG*WDMLSP
Trigger: TGGAGAAAGCATATCCCACCAACCTCCAGTGTCAGG...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTATTTGTCAAAGGCCTaGTCTGTGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAYLSKA*SVPGSM
Trigger: CATGCTGCCTGGCACAGACCAGGCCTTTGACAAATA...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAAATGCGGCACTGGCCTaGACACGATCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPNAALA*TRSRWS
Trigger: TGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATT...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCGAGAAGGTTTTCCCTTaGACCACACAGAATGCGGCA +
Preference number: 4 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLEKVFP*TTQNAA
Trigger: TGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTC...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCGGAAAGGGCGGGCCGTaGACTTGGAGAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSGKGGP*TWRRFS
Trigger: GGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTTCC...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR TCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAACACCTTGTACCACACTaGAGTTTTGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEHLVPH*SFVGHS
Trigger: ACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTG...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCACTCAGGCGCTGGTGCTaGGTGGGGAACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGALRRWC*VGNRSF
Trigger: GAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAG...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTCCACATCGGCCACGTaGTCGATGAAGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSSTSAT*SMKIWL
Trigger: CAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCAGAAAGTGGAGCCGCTaGCCTGGAAGAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSRKWSR*PGRAVS
Trigger: AGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCT...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCATGCAGGACAGGGTCCTaGAGGTGGCCCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGACRTGS*RWPCQE
Trigger: CTCCTGGCAGGGCCACCTGCAGGACCCTGTCCTGCA...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGTTCCCAGGAGGCTCTaGTTTCCAGCCAGATGTAAG +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVVPRRL*FPARCK
Trigger: CTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAAC...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QGAGLRRNPSWASMWREEGYFSL*SQMCSQ
Trigger: CTGGGAACACATCTGGCTGCACAGGCTGAAATATCC...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGAATCCATTTTGTCGGTaGGCTGGCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQNPFCR*AGHQDE
Trigger: TTCATCCTGGTGGCCAGCCCACCGACAAAATGGATT...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCCGTGTCAGTGGGACTaGGTCCCAGGTGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGPCQWD*VPGVPR
Trigger: GCGAGGGACACCTGGGACCCAGTCCCACTGACACGG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCTTCGGATGAGAAAGTaGAGCCGCTGCCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSLRMRK*SRCPGR
Trigger: TCTTCCAGGGCAGCGGCTCCACTTTCTCATCCGAAG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCACCTGCAGCCCCACTGTaGCCTGAGTGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAPAAPL*PEWWGS
Trigger: ACTCCCCCACCACTCAGGCCACAGTGGGGCTGCAGG...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSRHSAC*VDISAC
Trigger: ACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGGGGTCCGGCCCTGTGTaGGAAGTGAGCCTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SEKHLARLRPGTYKYCLGGSGPV*EVSLAD
Trigger: ATCTGCTAGGCTCACTTCCCACACAGGGCCGGACCC...CCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTTCTCAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGTGTTCCCAGGTGGCTaGCGAGCCTGTCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGVFPGG*RACHVP
Trigger: TGGCACGTGACAGGCTCGTCAGCCACCTGGGAACAC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGCCAGGAAAGCACATCTaGCCCCTAACCTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTPGKHI*PLTLHV
Trigger: CACATGCAAGGTTAGGGGTCAGATGTGCTTTCCTGG...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIASLAL*SLISLK
Trigger: CTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTCTGCTGGTGCAGCTaGAGTGCTGTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTFCWCS*SAVRML
Trigger: CAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAA...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGCGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SEKHLARLRPGTYKYCLGRSFCW*SCSAVR
Trigger: CCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCG...CCCAAGGCAGTATTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp ATTGCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGGAACCGCTCCTTCTaGTGGTGCAGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IAQIRFARSLARRTLENEGNRSF*WCSCSA
Trigger: AGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCC...CTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGTGGGCCATGAGCTGCTaGAGGCGCTTGTGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGWAMSC*RRLCGK
Trigger: CTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCA...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCACCCTGCCAGGAGTCCTaGCATATCCCTACCAGAATA +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPPCQES*HIPTRI
Trigger: TATTCTGGTAGGGATATGGCAGGACTCCTGGCAGGG...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCTGGGATTGGCAGGGTaGTCAGGGATCCAAACATCA +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSLGLAG*SGIQTS
Trigger: TGATGTTTGGATCCCTGAGCACCCTGCCAATCCCAG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGGCTCTGTCACTCTCTaGGGCTTGGGGATGACCCGC +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGGSVTL*GLGMTR
Trigger: GCGGGTCATCCCCAAGCCCCAGAGAGTGACAGAGCC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCAATCCATTTTGTCGGTaGGCTGGCCACCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPNPFCR*AGHQDE
Trigger: TTCATCCTGGTGGCCAGCCCACCGACAAAATGGATT...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCTGCTCGATGAAGATCTaGCTGCCAAATCGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPCSMKI*LPNRSF
Trigger: GAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCA...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGTGCTCGATGAAGATCTaGCTGCCAAATCGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVCSMKI*LPNRSF
Trigger: GAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCA...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAAAATTCACAGCGGAATaGGGCTGCCACCGAGTCGAT +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPKFTAE*GCHRVD
Trigger: ATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTT...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGTCACCACTGTGCCCATaGGGAGGCCACGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGSPLCP*GGHATL
Trigger: CAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGA...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp CCCCCAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGTGTTTTTGGCTGACTTaGCTGAGGCATCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPAQMGVSLWPPSSDEKVCFWLT*LRHLLH
Trigger: GTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACA...CACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGTTTTTGGCTGACTTaGCTGAGGCATCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: AGLEGSEAGGTGQAACFCCFWLT*LRHLLH
Trigger: GTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACA...ACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTTCCAGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: RRNPSWASMWREEAGGSQNGCKF*GTRLQF
Trigger: GAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATT...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPNGCKF*GTRLQF
Trigger: GAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATT...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGCCACCATCTTCGGATaGGAAAGTGGAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAATIFG*ESGAAA
Trigger: GGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ATTGCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGCTGCTCTCGAACTCCTaGCTTCATGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: IAQIRFARSLARRTLENELLSNS*LHDPPA
Trigger: GGCAGGCGGATCATGAAGTCAGGAGTTCGAGAGCAG...CTCATTCTCCAGCGTCCTCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDASLAL*SLISLK
Trigger: CTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGC...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHASLAL*SLISLK
Trigger: CTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGC...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGGGAACCGCTCCTTCTaGTGGTGCAGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAGNRSF*WCSCSA
Trigger: AGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp TACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAGGCTCAGGCGCTGGTaGTGCGTGGGGAACCGCTCC +
Preference number: 4 (lower is better)
Translates to: YCAYQAELYTFRGNFMACRLRRW*CVGNRS
Trigger: GGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCT...ACATGCCATAAAATTCCCTCTAAAAGTGTACAGTTCGGCCTGATAGGCGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGAAGGACTGCCCTGTGTaGAGGAGGGGAGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGKDCPV*RRGDPR
Trigger: ACGAGGGTCTCCCCTCCTGCACACAGGGCAGTCCTT...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGACACTGGAGGTTGGTaGGATATGCTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPDTGGW*DMLSPP
Trigger: AGGTGGAGAAAGCATATCCCACCAACCTCCAGTGTC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCATATTTGTCAAAGGCCTaGTCTGTGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPYLSKA*SVPGSM
Trigger: CATGCTGCCTGGCACAGACCAGGCCTTTGACAAATA...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp TTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCATCCTGCTGAGAACTTaGTTTAACAGGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FHVERRSRRLPGSHCRTPILLRT*FNRPGS
Trigger: TGAGCCAGGCCTGTTAAACCAAGTTCTCAGCAGGAT...GGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS-3UTR TCA 90 bp CCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGCGGAGGTGCCACCGATaGAAAAATACTGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PTGWKLRGSHCTNQICTKRRCHR*KNTATQ
Trigger: CTGAGTGGCAGTATTTTTTCATCGGTGGCACCTCCG...CTTCGTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGCTTCCACCCCGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGRSFCW*SCSAVR
Trigger: CCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCACGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGARSFCW*SCSAVR
Trigger: CCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCG...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGGAAGGCGTCTTCCGTaGAGATGTAGACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAGRRLP*RCRRLQ
Trigger: CTGGAGCCGTCTACATCTGCACGGAAGACGCCTTCC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGAGGCCACGCCACTCTaGCTGCTGGGTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGEATPL*LLGGYF
Trigger: GAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGAGGGGGTTGTACGGTaGGAATCAAGGGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGEGVVR*ESRGSP
Trigger: TGGTGACCCCCTTGATTCCCACCGTACAACCCCCTC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR TCA 90 bp ACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGGAACTGCATCCATTaGACATTTATTTGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TVPMGRPRHSACWVDISAWNCIH*TFICQR
Trigger: CCTTTGACAAATAAATGTTCAATGGATGCAGTTCCA...GGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS-3UTR GCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGTCCACATCGGCCACGTaGTCGATGAAGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGSTSAT*SMKIWL
Trigger: CAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGA...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAAGAAAGTGGAGCCGCTaGCCTGGAAGAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGARKWSR*PGRAVS
Trigger: AGACACAGCTCTTCCAGGGCAGCGGCTCCACTTTCT...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGGYAKG*GNTFVP
Trigger: TGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCGCCACTCTGCCTGCTaGGTGGATATTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGRHSAC*VDISAC
Trigger: ACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGCG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAATTCGGGCCTTTAGATTaGATCCAGGAAAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTEFGPLD*IQERKS
Trigger: TGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAA...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGRQSGS*GSSWAL
Trigger: GAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCG...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp CGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTTTAGGGGGACTGATTTaGGTAATAATAAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: RGLSTGVGITSEPACRFLLGGLI*VIIKLQ
Trigger: CTGGAGTTTTATTATTACTCAAATCAGTCCCCCTAA...AAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCATTCTGCTGGTGCAGCTaGAGTGCTGTAAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAFCWCS*SAVRML
Trigger: CAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAA...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFQLGLP*RAASGQ
Trigger: CTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTG...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCACACTGAAGTTTTGTaGGGCACAGTGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGHTEVL*GTVCAE
Trigger: CTCGGCACACACTGTGCCCCACAAAACTTCAGTGTG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTTCCCGCAGCAGTCACTaGGCTGGGCACAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFSRSSH*AGHSWG
Trigger: CCCCCAGCTGTGCCCAGCCCAGTGACTGCTGCGGGA...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCACCTTGTACCACACTaGAGTTTTGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGHLVPH*SFVGHS
Trigger: ACTGTGCCCCACAAAACTTCAGTGTGGTACAAGGTG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GCCACTCTGCCTGCTGGGTGGATATTTCAGCCTGTGCAGCCAGATGTGTTCCCAGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: ATLPAGWIFQPVQPDVFPASLAL*SLISLK
Trigger: CTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGC...TGGGAACACATCTGGCTGCACAGGCTGAAATATCCACCCAGCAGGCAGAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR GCA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTEASLAL*SLISLK
Trigger: CTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGC...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGGATATTTCAGCCTGTaGAGCCAGATGTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAGYFSL*SQMCSQ
Trigger: CTGGGAACACATCTGGCTGCACAGGCTGAAATATCC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGACACTGGAGGTTGGTaGGATATGCTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGDTGGW*DMLSPP
Trigger: AGGTGGAGAAAGCATATCCCACCAACCTCCAGTGTC...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCCTGACACTGGAGGTTaGTGGGATATGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGPDTGG*WDMLSP
Trigger: TGGAGAAAGCATATCCCACCAACCTCCAGTGTCAGG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCATATTTGTCAAAGGCCTaGTCTGTGCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAYLSKA*SVPGSM
Trigger: CATGCTGCCTGGCACAGACCAGGCCTTTGACAAATA...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTGGAAGGTCGGGGCCCTaGGCTTCCTCCGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFGRSGP*ASSVLL
Trigger: CAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCC...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGAGCCTCCAGGCCTCCGTaGTGCCGCGGGAACTGCACA +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGASRPP*CRGNCT
Trigger: TGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGC...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGATCCCAGCCACACCGCTaGTGGCAGGTCAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGSQPHR*WQVRPV
Trigger: CACGGGCCTGACCTGCCAGCAGCGGTGTGGCTGGGA...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTTTGTGGGAGAGCCAGTaGCCCCACGCCGTGTCATGC +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFLWESQ*PHAVSC
Trigger: GCATGACACGGCGTGGGGGCACTGGCTCTCCCACAA...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGATGCATGTGGTCACGGTaGCCGTGGGGCCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGCMWSR*PWGPLP
Trigger: AGGGAGGGGGCCCCACGGCCACCGTGACCACATGCA...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCGCAAGGCTGGACTGTaGTGTCATCCCGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFRKAGL*CHPAAV
Trigger: GACTGCTGCGGGATGACAGCACAGTCCAGCCTTGCG...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTTCCTGCAGTGGCACATaGAGTTGTGGGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFSCSGT*SCGRAS
Trigger: ACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGA...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGAGGGTATCGGGGAGTGTaGGCTTCACTGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGGYRGV*ASLKRP
Trigger: TGGCCTTTTCAGTGAAGCCCACACTCCCCGATACCC...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR TCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGAAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGNGCKF*GTRLQF
Trigger: GAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATT...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR GCA 90 bp TTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGAACTTCAGAGCCCGCCTaGCGCTTTCTTTTCAAAATT +
Preference number: 4 (lower is better)
Translates to: FCFDRISNVKKSCKNGSGTSEPA*RFLFKI
Trigger: AATTTTGAAAAGAAAGCGGCAGGCGGGCTCTGAAGT...TCCTGACCCATTTTTGCAACTCTTCTTTACGTTTGAAATTCTGTCAAAGCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS TCA 90 bp GCGCCAGCTGGGTCTTCCCTGCCGAGCTGCGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGCCACCGCGGAGCAGCGCGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: APAGSSLPSCVRPAQ*CRPGAGHRGAARPA
Trigger: TGCTGGACGCGCTGCTCCGCGGTGGCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000557439.5
CDS GCA 90 bp TCCAGGCCTCCGTGCTGCCGCGGGAACTGCACAGCCAGGCAGAGCTaGAGCGCCAGCTGGGTCTTCCCTGCCGAGCTGCGTCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRPPCCRGNCTARQS*SASWVFPAELRPAS
Trigger: GCTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000557439.5
CDS CCA 90 bp CCGCGGAGCAGCGCGTCCAGCACCGGGCAGCCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGCTCCTTCTGCTGGTGCAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PRSSASSTGQPRLRR*CCVGNRSFCWCSCS
Trigger: ACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGGCTGCCCGGTGCTGGACGCGCTGCTCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555964.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 90 bp CGGAGCAGCGCGTCCAGCACCGGGCAGCCCAGGCTCAGGCGCTGGTaGTGCGTGGGGAACCGCTCCTTCTGCTGGTGCAGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RSSASSTGQPRLRRW*CVGNRSFCWCSCSA
Trigger: AGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGGCTGCCCGGTGCTGGACGCGCTGCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555964.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 90 bp CCAGGTGGAGCAGGCCACCCTGACTGTGAGGCCTGCCCAGAGCCCTaGCCACAGCACCGTGTGTGTGGCCGTGGCACCTGCCCACCACGG +
Preference number: 5 (lower is better)
Translates to: PGGAGHPDCEACPEP*PQHRVCGRGTCPPR
Trigger: CCGTGGTGGGCAGGTGCCACGGCCACACACACGGTGCTGTGGGCAGGGCTCTGGGCAGGCCTCACAGTCAGGGTGGCCTGCTCCACCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 90 bp TGCCCAGAGCCCTGCCCACAGCACCGTGTGTGTGGCCGTGGCACCTaGCCACCACGGCAGCCCCAAGTTCAGCACGTTCCTCGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: CPEPCPQHRVCGRGT*PPRQPQVQHVPRGL
Trigger: CAGGCCCCGAGGAACGTGCTGAACTTGGGGCTGCCGTGGTGGGCAGGTGCCACGGCCACACACACGGTGCTGTGGGCAGGGCTCTGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 90 bp CTCCACGACACCGAAGCCCCTCAGGGCAAGGCTCAAGGTGGGACATaGGGTGCAGGCTGCGCTCTTGGCCTGGGGCCTGGGCCGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LHDTEAPQGKAQGGT*GAGCALGLGPGPGG
Trigger: TCCTCCCGGCCCAGGCCCCAGGCCAAGAGCGCAGCCTGCACCGCATGTCCCACCTTGAGCCTTGCCCTGAGGGGCTTCGGTGTCGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp TGGGCCGGGAGGAGCAGCCCCTCCCTTGGAGTCTGCACACTGCCTTaGGCACCCCGTCCAGGTGGAGCAGGCCACCCTGACTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: WAGRSSPSLGVCTLP*APRPGGAGHPDCEA
Trigger: GGCCTCACAGTCAGGGTGGCCTGCTCCACCTGGACGGGGTGCCCAAGGCAGTGTGCAGACTCCAAGGGAGGGGCTGCTCCTCCCGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp CAGCCTCCTCCACGACACCGAAGCCCCTCAGGGCAAGGCTCAAGGTaGGACATGCGGTGCAGGCTGCGCTCTTGGCCTGGGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QPPPRHRSPSGQGSR*DMRCRLRSWPGAWA
Trigger: GGCCCAGGCCCCAGGCCAAGAGCGCAGCCTGCACCGCATGTCCCACCTTGAGCCTTGCCCTGAGGGGCTTCGGTGTCGTGGAGGAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 90 bp GAACTGCACAGCCAGGCAGAGCTGCAGCGCCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAGCTCAGTGATGCCGTCCAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: ELHSQAELQRQLGLP*RAASGQLSDAVQGQ
Trigger: CTGCCCCTGGACGGCATCACTGAGCTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGTGCAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000557439.5
CDS GCA 90 bp AAGGCCCGAGCCCCGTGTGTCGGGGCTTCTCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGTGGGACTGGGTCCCAGGTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: KARAPCVGASQAGLL*SRHRVSGTGSQVSL
Trigger: GAGGGACACCTGGGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGAAGCCCCGACACACGGGGCTCGGGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
CDS CCA 90 bp AGAGCAGGTCGCATCCTTCTCAGGGCGGTGGTCTCCTGGGGCAGCTaGTCAGGGGCCCACAGCCCAGAGGAGGTCCTTGCCACCCGCCTG +
Preference number: 5 (lower is better)
Translates to: RAGRILLRAVVSWGS*SGAHSPEEVLATRL
Trigger: CAGGCGGGTGGCAAGGACCTCCTCTGGGCTGTGGGCCCCTGACCAGCTGCCCCAGGAGACCACCGCCCTGAGAAGGATGCGACCTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 90 bp GCAGCCTGGAGAGCAGGTCGCATCCTTCTCAGGGCGGTGGTCTCCTaGGGCAGCTGGTCAGGGGCCCACAGCCCAGAGGAGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: AAWRAGRILLRAVVS*GSWSGAHSPEEVLA
Trigger: GGCAAGGACCTCCTCTGGGCTGTGGGCCCCTGACCAGCTGCCCCAGGAGACCACCGCCCTGAGAAGGATGCGACCTGCTCTCCAGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS TCA 90 bp AAGGCAGCAGCCTCGAGGGCCGGGTCCAGGATCCATGTCCTCCAGTaGGGCCTGGCGCCCTTGGCCGTAACCCAGCAGAGGAAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: KAAASRAGSRIHVLQ*GLAPLAVTQQRKGR
Trigger: CCGCCCTTTCCTCTGCTGGGTTACGGCCAAGGGCGCCAGGCCTCACTGGAGGACATGGATCCTGGACCCGGCCCTCGAGGCTGCTGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 90 bp AAGTGTCTCCCTGGGGACTCGGTTGGCCAACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTCTGTGCACATCCTCCCGCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: KCLPGDSVGQRQSGS*GSSWALCAHPPAGS
Trigger: GGAACCCGCGGGAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCGTTGGCCAACCGAGTCCCCAGGGAGACACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555055.6
ENST00000557439.5
CDS-3UTR CAA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGTCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTC +
Preference number: 5 (lower is better)
Translates to: SAVGTRYPASGPVPRPRESQAGL*CSRHRV
Trigger: GACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGA...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS GCA 90 bp AAATACTGCCACTCAGCCTCCAGGCCTCCGTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGCAGCGCCAGCTGGGTCTTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: KYCHSASRPPCCRGN*TARQSCSASWVFPA
Trigger: GGCAGGGAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGCTGAGTGGCAGTATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553361.5
ENST00000557439.5
CDS GCA 90 bp CGCCCTGAGGCTGGTCCCTGGGTGAAGTCTGCACAGCCCCTGCCCTaGACCACTGGGACCATGATGCTGGAGCCACATGTCACCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RPEAGPWVKSAQPLP*TTGTMMLEPHVTPG
Trigger: GCCAGGGGTGACATGTGGCTCCAGCATCATGGTCCCAGTGGTGCAGGGCAGGGGCTGTGCAGACTTCACCCAGGGACCAGCCTCAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 90 bp TCTTGGCTACAGGACGGACTCCACTGGCCCCCGGTGAGTGGCCCCTaGTCTCTGCAAGGCCCTGCCATAGGTCCCTCCTCCAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SWLQDGLHWPPVSGP*SLQGPAIGPSSKPS
Trigger: GCTGGGCTTGGAGGAGGGACCTATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 90 bp CTTCCCCTGCTGAGACCTGGTTTCCCACACGTGGTGGTGGGACCGTaGCCAGGGCCCCATCTCACACCGTTCCCACCCTGCCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LPLLRPGFPHVVVGP*PGPHLTPFPPCQSL
Trigger: CAGGCTCTGGCAGGGTGGGAACGGTGTGAGATGGGGCCCTGGCCACGGTCCCACCACCACGTGTGGGAAACCAGGTCTCAGCAGGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp GCCTGCTTCTTGGCTACAGGACGGACTCCACTGGCCCCCGGTGAGTaGCCCCTGCTCTCTGCAAGGCCCTGCCATAGGTCCCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: ACFLATGRTPLAPGE*PLLSARPCHRSLLQ
Trigger: TTGGAGGAGGGACCTATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGAAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS-3UTR CAA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGTCACTCTCTGGGGCTaGGGGATGACCCGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPVTLWG*GMTRVF
Trigger: AAACACGCGGGTCATCCCCAAGCCCCAGAGAGTGAC...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGATCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTC +
Preference number: 5 (lower is better)
Translates to: QAPALRITSPQGPAQQWGSQAGL*CSRHRV
Trigger: GACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGA...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTC +
Preference number: 5 (lower is better)
Translates to: TPRARIHRDPPSSQPRILSQAGL*CSRHRV
Trigger: GACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGGGCGGGCCGTGGACTaGGAGAAGGTTTTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVGRAVD*EKVFPW
Trigger: CCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 90 bp AAGTGTCTCCCTGGGGACTCGGTTGGCCAACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTCTGTGCACATCCTGCTGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: KCLPGDSVGQRQSGS*GSSWALCAHPAENS
Trigger: GGAGTTCTCAGCAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCGTTGGCCAACCGAGTCCCCAGGGAGACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554170.1
CDS TCA 90 bp GAGGGCCCTGCTCATGCCAGGACCCCGCTGCCTACTAGGGCCTGCTaGGATGCAGGGATGGAAACCTTGTCCGTCCAGGCGCATGGGGTT +
Preference number: 5 (lower is better)
Translates to: EGPAHARTPLPTRAC*DAGMETLSVQAHGV
Trigger: AACCCCATGCGCCTGGACGGACAAGGTTTCCATCCCTGCATCTCAGCAGGCCCTAGTAGGCAGCGGGGTCCTGGCATGAGCAGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp GGCTGGTCCCTGGGTGAAGTCTGCACAGCCCCTGCCCTGCACCACTaGGACCATGATGCTGGAGCCACATGTCACCCCTGGCAGAGATGC +
Preference number: 5 (lower is better)
Translates to: GWSLGEVCTAPALHH*DHDAGATCHPWQRC
Trigger: GCATCTCTGCCAGGGGTGACATGTGGCTCCAGCATCATGGTCCCAGTGGTGCAGGGCAGGGGCTGTGCAGACTTCACCCAGGGACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp TCCCAGCCTCTCTTGCCTGCTTCTTGGCTACAGGACGGACTCCACTaGCCCCCGGTGAGTGGCCCCTGCTCTCTGCAAGGCCCTGCCATA +
Preference number: 5 (lower is better)
Translates to: SQPLLPASWLQDGLH*PPVSGPCSLQGPAI
Trigger: TATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGAAGCAGGCAAGAGAGGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS TCA 90 bp AAGTGTCTCCCTGGGGACTCGGTTGGCCAACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTCTGTGCACATCCTGCTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: KCLPGDSVGQRQSGS*GSSWALCAHPAENL
Trigger: CAAGTTCTCAGCAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCGTTGGCCAACCGAGTCCCCAGGGAGACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS GCA 90 bp CGTGCTTCCGATTCTGGGGACAAGGTGGGTAGGGACCGGATCCCCTaGTCCCTGGAAACCCTGGACACAGTGTGGCCGATGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: RASDSGDKVGRDRIP*SLETLDTVWPMHRH
Trigger: GTGCCTGTGCATCGGCCACACTGTGTCCAGGGTTTCCAGGGAGCAGGGGATCCGGTCCCTACCCACCTTGTCCCCAGAATCGGAAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp CAGCAGTCTCACCAGGAGCTGGTTAGCCCAGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCAGAACCCCAGCGGCCCGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QQSHQELVSPGYAKG*GNTFVPEPQRPVCC
Trigger: GCAGCACACGGGCCGCTGGGGTTCTGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CCA 90 bp GCCTCTTCCTCGCGGAGCCGGTCAGCCAGCAGTCTCACCAGGAGCTaGTTAGCCCAGGTTATGCCAAGGGCTGGGGAAACACGTTCGTCC +
Preference number: 5 (lower is better)
Translates to: ASSSRSRSASSLTRS*LAQVMPRAGETRSS
Trigger: GGACGAACGTGTTTCCCCAGCCCTTGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACTGCTGGCTGACCGGCTCCGCGAGGAAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CCA 90 bp CCCCTGTCGGCCTCCCAAATGGTGAGACCAAGAGTGTCCAGGACATaGGGAAACTGGAAGGCAGCAGCCTCGAGGGCCGGGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: PLSASQMVRPRVSRT*GNWKAAASRAGSRI
Trigger: GATCCTGGACCCGGCCCTCGAGGCTGCTGCCTTCCAGTTTCCCCATGTCCTGGACACTCTTGGTCTCACCATTTGGGAGGCCGACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 90 bp AACATCAGTCGCCCCCAGCAGCCAACAGCAGAAGACAGCTTCCTGTaGGACGGGAGGAAGGTGCTGTGGACCCCACCCAGCCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: NISRPQQPTAEDSFL*DGRKVLWTPPSLSQ
Trigger: CTGGGAGAGGCTGGGTGGGGTCCACAGCACCTTCCTCCCGTCCCACAGGAAGCTGTCTTCTGCTGTTGGCTGCTGGGGGCGACTGATGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 90 bp ATGCCAGGACCCCGCTGCCTACTAGGGCCTGCTGAGATGCAGGGATaGAAACCTTGTCCGTCCAGGCGCATGGGGTTCCCTGGGTACCTC +
Preference number: 5 (lower is better)
Translates to: MPGPRCLLGPAEMQG*KPCPSRRMGFPGYL
Trigger: GAGGTACCCAGGGAACCCCATGCGCCTGGACGGACAAGGTTTCCATCCCTGCATCTCAGCAGGCCCTAGTAGGCAGCGGGGTCCTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS-3UTR CAA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCGTCACTCTCTGGGGCTaGGGGATGACCCGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: TPRARIHRDPPSSQPRILVTLWG*GMTRVF
Trigger: AAACACGCGGGTCATCCCCAAGCCCCAGAGAGTGAC...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAATCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTC +
Preference number: 5 (lower is better)
Translates to: QGAGLRRNPSWASMWREESQAGL*CSRHRV
Trigger: GACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGA...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCAGTGGCACATGCAGTaGTGGGAGAGCCAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCQWHMQ*WESQCP
Trigger: GGGGCACTGGCTCTCCCACAACTGCATGTGCCACTG...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS TCA 90 bp TCGGCCACGTGCTCGATGAAGATCTGGCTGCCAAATCGGAGCTTCTaGAGCAGCTCTCCTGGAACGTCAGTGCGCAGCCGCGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SATCSMKIWLPNRSF*SSSPGTSVRSRGCW
Trigger: CCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555451.1
CDS CCA 90 bp CCGATTCTGGGGACAAGGTGGGTAGGGACCGGATCCCCTGCTCCCTaGAAACCCTGGACACAGTGTGGCCGATGCACAGGCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PILGTRWVGTGSPAP*KPWTQCGRCTGTRK
Trigger: TTTCCTCGTGCCTGTGCATCGGCCACACTGTGTCCAGGGTTTCCAGGGAGCAGGGGATCCGGTCCCTACCCACCTTGTCCCCAGAATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS-3UTR CAA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAATGACCCGCGTGTTTTaGGCTGACTTGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPMTRVF*ADLTEA
Trigger: TGCCTCAGTCAAGTCAGCCAAAAACACGCGGGTCAT...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS TCA 90 bp GTCCGGCTCCTGAGGCTCCTCCTGGGCCCTCTGTGCACATCCTGCTaGGAACTTGGTTTAACAGGCCTGGCTCAAAGTCTCCCGCGGGTT +
Preference number: 5 (lower is better)
Translates to: VRLLRLLLGPLCTSC*ELGLTGLAQSLPRV
Trigger: AACCCGCGGGAGACTTTGAGCCAGGCCTGTTAAACCAAGTTCTCAGCAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS GCA 90 bp GCGGGCCGTGGACTTGGAGAAGGTTTTCCCTTGGACCACACAGAATaGGGCACTGGCCTGGACACGATCACGCTGGTCACTCGTATGCCC +
Preference number: 5 (lower is better)
Translates to: AGRGLGEGFPLDHTE*GTGLDTITLVTRMP
Trigger: GGGCATACGAGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS GCA 90 bp CACTGGGACCATGATGCTGGAGCCACATGTCACCCCTGGCAGAGATaGCAGGGCCCACCTACCTGTAAGGATGCTGCTTCCCCGCAAGTG +
Preference number: 5 (lower is better)
Translates to: HWDHDAGATCHPWQR*QGPPTCKDAASPQV
Trigger: CACTTGCGGGGAAGCAGCATCCTTACAGGTAGGTGGGCCCTGGCATCTCTGCCAGGGGTGACATGTGGCTCCAGCATCATGGTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554811.5
ENST00000555231.5
CDS CCA 90 bp GATGAAGATCTGGCTGCCAAATCGGAGCTTCTGAAGCAGCTCTCCTaGAACGTCAGTGCGCAGCCGCGGCTGCTGGGCCATGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DEDLAAKSELLKQLS*NVSAQPRLLGHELL
Trigger: CAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555451.1
CDS CCA 90 bp CAGCAGAGGAAAGGGCGGGCCGTGGACTTGGAGAAGGTTTTCCCTTaGACCACACAGAATGCGGCACTGGCCTGGACACGATCACGCTGG +
Preference number: 5 (lower is better)
Translates to: QQRKGRAVDLEKVFP*TTQNAALAWTRSRW
Trigger: CCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTTCCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 90 bp GCCTCCCAAATGGTGAGACCAAGAGTGTCCAGGACATGGGGAAACTaGAAGGCAGCAGCCTCGAGGGCCGGGTCCAGGATCCATGTCCTC +
Preference number: 5 (lower is better)
Translates to: ASQMVRPRVSRTWGN*KAAASRAGSRIHVL
Trigger: GAGGACATGGATCCTGGACCCGGCCCTCGAGGCTGCTGCCTTCCAGTTTCCCCATGTCCTGGACACTCTTGGTCTCACCATTTGGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CAA 90 bp CGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCAGATCCAAATCCATTTaGTCGGTGGGCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RPVPEHARVPPPPHSSSSRSKSI*SVGWPP
Trigger: TGGTGGCCAGCCCACCGACAAAATGGATTTGGATCT...GGAAGAGCTGCTGTGAGGTGGAGGCGGGACTCGAGCGTGCTCAGGAACGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTTCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPSGLER*VSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGA...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp ACCCTCGTGGGCACGGTCCCAAGGCTGAGGGGGTCTGAGGCCCCAGCCCAGGGGCCATTGAACATTTATTaGTCAAAGGCCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TLVGTVPRLRGSEAPAQGPLNIY*SKAWSV
Trigger: CACAGACCAGGCCTTTGACAAATAAATGTTCAATGG...CCCCTGGGCTGGGGCCTCAGACCCCCTCAGCCTTGGGACCGTGCCCACGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGGCTGAGGGGGAGTCATaGCACAAATCAGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: GATGRSGPWASSVLLAGEAEGES*HKSDLH
Trigger: GTGCAAATCTGATTTGTGCAATGACTCCCCCTCAGC...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAGCTTCCTCCGTCCTGTaGGCTGGAGAGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTEASSVL*AGERLG
Trigger: GCCCAGCCTCTCTCCAGCCAACAGGACGGAGGAAGC...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp CCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGCGTATAAATACTGCCTaGGGAGGCCACATCCCTTTT +
Preference number: 5 (lower is better)
Translates to: PGPRGPRGVVLFLQWHMQRINTA*GGHIPF
Trigger: AAAAGGGATGTGGCCTCCCAAGGCAGTATTTATACG...CTGCATGTGCCACTGCAGGAACAGGACGACGCCCCGTGGGCCACGGGGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS TCA 90 bp ACTCGCCTTCAATTCAAAGCCTGTGGGAGGCCCGAACCAGGGAAGTaGCAGCAGCCGAGGTGTCCGTGTCATCGGGGCTCTGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: TRLQFKACGRPEPGK*QQPRCPCHRGSVTL
Trigger: GAGAGTGACAGAGCCCCGATGACACGGACACCTCGGCTGCTGTCACTTCCCTGGTTCGGGCCTCCCACAGGCTTTGAATTGAAGGCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553332.5
ENST00000553361.5
ENST00000554170.1
ENST00000555055.6
ENST00000555231.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 90 bp GGAGGTCCCACAGCCCGTGTCCACCTCACGCATCTTCTGACCCGATaGTGTGACCACAGCCCCATGGGTGTAGGACAAGCAAGATGGGAA +
Preference number: 5 (lower is better)
Translates to: GGPTARVHLTHLLTR*CDHSPMGVGQARWE
Trigger: TTCCCATCTTGCTTGTCCTACACCCATGGGGCTGTGGTCACAGCATCGGGTCAGAAGATGCGTGAGGTGGACACGGGCTGTGGGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS-3UTR CAA 90 bp GACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTAGATCCAAATCCATTTaGTCGGTGGGCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: DPQGQDTPGPSFLSTSDPRSKSI*SVGWPP
Trigger: TGGTGGCCAGCCCACCGACAAAATGGATTTGGATCT...AGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TGTACGGTGGGAATCAAGGGGGTCACCACTGTGCCCATGGGGAGGCCACGCCACAGATCCAAATCCATTTaGTCGGTGGGCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: CTVGIKGVTTVPMGRPRHRSKSI*SVGWPP
Trigger: TGGTGGCCAGCCCACCGACAAAATGGATTTGGATCT...GTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCCCCTTGATTCCCACCGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGTCACTGTAGGACACCCCAGGCTCTCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: WREEAGGSQGVTVGHPRLSGLER*VSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGA...GAGCCTGGGGTGTCCTACAGTGACTCCCTGGGAGCCGCCTGCTTCTTCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CAGGCTCCAGCCCTGAGAATCACCTCTCCCCAAGGGCCAGCTCAGCAGTGGGGATACCACACTGAAGTTTaGTGGGGCACAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: QAPALRITSPQGPAQQWGYHTEV*WGTVCA
Trigger: GGCACACACTGTGCCCCACAAAACTTCAGTGTGGTA...TCCCCACTGCTGAGCTGGCCCTTGGGGAGAGGTGATTCTCAGGGCTGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTTACCACACTGAAGTTTaGTGGGGCACAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVYHTEV*WGTVCA
Trigger: GGCACACACTGTGCCCCACAAAACTTCAGTGTGGTA...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTACCACACTGAAGTTTaGTGGGGCACAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDYHTEV*WGTVCA
Trigger: GGCACACACTGTGCCCCACAAAACTTCAGTGTGGTA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS TCA 90 bp TCCCACAGCCCGTGTCCACCTCACGCATCTTCTGACCCGATGCTGTaGCCACAGCCCCATGGGTGTAGGACAAGCAAGATGGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: SHSPCPPHASSDPML*PQPHGCRTSKMGTL
Trigger: CAGAGTTCCCATCTTGCTTGTCCTACACCCATGGGGCTGTGGTCACAGCATCGGGTCAGAAGATGCGTGAGGTGGACACGGGCTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp GTCCTTGCCACCCGCCTGGGGCTTCTCTTCCCCACTCCGTCTTCATaGGCAAGGTTGACAGATGGTGTACAGGCGCCCAGTTACATCACA +
Preference number: 5 (lower is better)
Translates to: VLATRLGLLFPTPSS*ARLTDGVQAPSYIT
Trigger: TGTGATGTAACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAGAGAAGCCCCAGGCGGGTGGCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS-3UTR CAA 90 bp CAGCTGTGCCACGGCCCAGGCAGACGCGTTTTAAAGGCCCGAGCCCCGTGTGTCGTGTTTTTGGCTGACTaGACTGAGGCATCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: QLCHGPGRRVLKARAPCVVFLAD*TEASLA
Trigger: TGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACAC...GACACACGGGGCTCGGGCCTTTAAAACGCGTCTGCCTGGGCCGTGGCACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp GGGTCACCACTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATAGTGTTTTTGGCTGACTaGACTGAGGCATCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: GSPLCPWGGHATLPAGWIVFLAD*TEASLA
Trigger: TGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACAC...TATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAGTGGTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTTCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RGLSTGVGITSEPACRFLSGLER*VSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGA...AAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp CTGTGCCCATGGGGAGGCCACGCCACTCTGCCTGCTGGGTGGATATTTCAGCCTTACCACACTGAAGTTTaGTGGGGCACAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LCPWGGHATLPAGWIFQPYHTEV*WGTVCA
Trigger: GGCACACACTGTGCCCCACAAAACTTCAGTGTGGTA...AGGCTGAAATATCCACCCAGCAGGCAGAGTGGCGTGGCCTCCCCATGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGGAGAAGGTTTTCCCTaGGACCACACAGAATGCGGC +
Preference number: 5 (lower is better)
Translates to: RRNPSWASMWREEAGGSQGEGFP*DHTECG
Trigger: GCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 90 bp CTTTCCAACAGGCCACTCTGCATCCCCTGTCGGCCTCCCAAATGGTaGGACCAAGAGTGTCCAGGACATGGGGAAACTGGAAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LSNRPLCIPCRPPKW*DQECPGHGETGRQQ
Trigger: CTGCTGCCTTCCAGTTTCCCCATGTCCTGGACACTCTTGGTCTCACCATTTGGGAGGCCGACAGGGGATGCAGAGTGGCCTGTTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 90 bp CCCGCAGGCGCGCACACATGCACACCACATGCCGTCAGTTCTCTGTaGCAGATACCATTCTGGAGCAATGCTGGTCTCAGCCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PAGAHTCTPHAVSSL*QIPFWSNAGLSLLA
Trigger: AGCCAAGAGGCTGAGACCAGCATTGCTCCAGAATGGTATCTGTCACAGAGAACTGACGGCATGTGGTGTGCATGTGTGCGCGCCTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 90 bp AGGATGCTGCTTCCCCGCAAGTGTAAGGAGGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAGAGGTTGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RMLLPRKCKEAVLSK*QTSGLERLVSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGCCTCCTTACACTTGCGGGGAAGCAGCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 90 bp GCGGCTTTAATGGGCTCCCGCAGGCGCGCACACATGCACACCACATaGCGTCAGTTCTCTGTGACAGATACCATTCTGGAGCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: AALMGSRRRAHMHTT*RQFSVTDTILEQCW
Trigger: CCAGCATTGCTCCAGAATGGTATCTGTCACAGAGAACTGACGGCATGTGGTGTGCATGTGTGCGCGCCTGCGGGAGCCCATTAAAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp CCATTCTGGAGCAATGCTGGTCTCAGCCTCTTGGCTAAAGGGCCTTaGATGAGCCATTTGACACAGCCTCCTCCACGACACCGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: PFWSNAGLSLLAKGP*MSHLTQPPPRHRSP
Trigger: GGGGCTTCGGTGTCGTGGAGGAGGCTGTGTCAAATGGCTCATCCAAGGCCCTTTAGCCAAGAGGCTGAGACCAGCATTGCTCCAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 90 bp GGGGCTTCTCTTCCCCACTCCGTCTTCATGGGCAAGGTTGACAGATaGTGTACAGGCGCCCAGTTACATCACATCGGCCACGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GASLPHSVFMGKVDR*CTGAQLHHIGHVLD
Trigger: ATCGAGCACGTGGCCGATGTGATGTAACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAGAGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS-3UTR CAA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCATATGCTTTCTCCACCTaGTACCACACTGAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPYAFST*YHTEVL
Trigger: CAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATA...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CCAGCTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCACCATTGAACATTTATTaGTCAAAGGCCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PAQQWGPGTQQAGLSPDPPLNIY*SKAWSV
Trigger: CACAGACCAGGCCTTTGACAAATAAATGTTCAATGG...TGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS CCA 90 bp TTGGAGAAGGTTTTCCCTTGGACCACACAGAATGCGGCACTGGCCTaGACACGATCACGCTGGTCACTCGTATGCCCATGTTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LEKVFPWTTQNAALA*TRSRWSLVCPCSAC
Trigger: GCAGGCTGAACATGGGCATACGAGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 90 bp CTCCATGTGAAGAAAAAGGCACAGCTCTGTCCAGCTGGGATGCCCTaGGGTGCTGAACAGTTCTCAAGCGGCTTTAATGGGCTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LHVKKKAQLCPAGMP*GAEQFSSGFNGLPQ
Trigger: CTGCGGGAGCCCATTAAAGCCGCTTGAGAACTGTTCAGCACCCCAGGGCATCCCAGCTGGACAGAGCTGTGCCTTTTTCTTCACATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS-3UTR CAA 90 bp CAGCTCAGATGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCTCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: QLRWGSVCGHHLRMRKWSSGLER*VSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGA...GCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS TCA 90 bp ATGGTGTACAGGCGCCCAGTTACATCACATCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATCGGAGCTTCTGAAGCAGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: MVYRRPVTSHRPRAR*RSGCQIGASEAALL
Trigger: CAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGATGTAACTGGGCGCCTGTACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 90 bp TGGACTTGGAGAAGGTTTTCCCTTGGACCACACAGAATGCGGCACTaGCCTGGACACGATCACGCTGGTCACTCGTATGCCCATGTTCAG +
Preference number: 5 (lower is better)
Translates to: WTWRRFSLGPHRMRH*PGHDHAGHSYAHVQ
Trigger: CTGAACATGGGCATACGAGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS-3UTR CAA 90 bp AGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAAGCAGGCGGCTCCCAGGTGTTTTTGGCTGACTaGACTGAGGCATCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: RRNPSWASMWREEAGGSQVFLAD*TEASLA
Trigger: TGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACAC...CTGGGAGCCGCCTGCTTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGAGTTTACCGATTTCAGTTaGGCTTTCTTAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SAVGTRYPASGPVPRPREFTDFS*AFLIAA
Trigger: TGCTGCAATTAAGAAAGCCAAACTGAAATCGGTAAA...CTCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CTCAGCAGTGGGGACCAGGTACCCAGCAAGCGGGCCTGTCCCCAGACCCAGGGATTTACCGATTTCAGTTaGGCTTTCTTAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LSSGDQVPSKRACPQTQGFTDFS*AFLIAA
Trigger: TGCTGCAATTAAGAAAGCCAAACTGAAATCGGTAAA...TCCCTGGGTCTGGGGACAGGCCCGCTTGCTGGGTACCTGGTCCCCACTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCTATGCTTTCTCCACCTaGTACCACACTGAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: TPRARIHRDPPSSQPRILYAFST*YHTEVL
Trigger: CAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATA...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp ACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATCCTCCCATTGAACATTTATTaGTCAAAGGCCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TPRARIHRDPPSSQPRILPLNIY*SKAWSV
Trigger: CACAGACCAGGCCTTTGACAAATAAATGTTCAATGG...GAGGATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp AGAGCTGTGTCTGAACCAGGCTCCCAGCTGTGCCACGGCCCAGGCAGACGCGTTCCATTGAACATTTATTaGTCAAAGGCCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RAVSEPGSQLCHGPGRRVPLNIY*SKAWSV
Trigger: CACAGACCAGGCCTTTGACAAATAAATGTTCAATGG...AACGCGTCTGCCTGGGCCGTGGCACAGCTGGGAGCCTGGTTCAGACACAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTATTCGGGCCTTTAGATaGGATCCAGGAAAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: RGLSTGVGITSEPACRFLIRAFR*DPGKEV
Trigger: GACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAAT...AAGAAAGCGGCAGGCGGGCTCTGAAGTGATTCCGACTCCCGTGCTTAAGCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp GGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGCTTAGGGGGACTGATTaGAGTAATAATAAAACTCCA +
Preference number: 5 (lower is better)
Translates to: GATGRSGPWASSVLLAGELRGTD*SNNKTP
Trigger: TGGAGTTTTATTATTACTCAAATCAGTCCCCCTAAG...CTCTCCAGCCAACAGGACGGAGGAAGCCCAGGGCCCCGACCTTCCTGTGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS TCA 90 bp TTTCCCTTAAGTGTCTCCCTGGGGACTCTGGAAAGAGTGGGAAGGTaGGTCTGGGATTGGCAGGGTGCTCAGGGATCCAAACATCAGTCG +
Preference number: 5 (lower is better)
Translates to: FPLSVSLGTLERVGR*VWDWQGAQGSKHQS
Trigger: CGACTGATGTTTGGATCCCTGAGCACCCTGCCAATCCCAGACTCACCTTCCCACTCTTTCCAGAGTCCCCAGGGAGACACTTAAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553264.5
ENST00000553332.5
ENST00000556682.5
CDS TCA 90 bp ACGCAGGGCAACACAGTGACAAAAGGTGCTTTGTTAAGAGCACTGTaGGAGCACCGTGCTTCCGATTCTGGGGACAAGGTGGGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: TQGNTVTKGALLRAL*EHRASDSGDKVGRD
Trigger: GTCCCTACCCACCTTGTCCCCAGAATCGGAAGCACGGTGCTCTCACAGTGCTCTTAACAAAGCACCTTTTGTCACTGTGTTGCCCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553807.1
ENST00000554811.5
CDS CCA 90 bp GCAAGTGTAAGGAGGCCGTTCTCAGCAAGTGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCTTCAAGTCTGGTCCAGAAAAGTGTA +
Preference number: 5 (lower is better)
Translates to: ASVRRPFSASARPRG*RGWSVSSSLVQKSV
Trigger: TACACTTTTCTGGACCAGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGCCTCCTTACACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS-3UTR CAA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCAGTCACTCTCTGGGGCTaGGGGATGACCCGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGAVTLWG*GMTRVF
Trigger: AAACACGCGGGTCATCCCCAAGCCCCAGAGAGTGAC...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000555055.6
CDS-3UTR CAA 90 bp GGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAATTGCACAAATCAGATTaGCACGAAGCCTGGCACGGA +
Preference number: 5 (lower is better)
Translates to: GVLRLLCPWVSGSVGFTELHKSD*HEAWHG
Trigger: TCCGTGCCAGGCTTCGTGCAAATCTGATTTGTGCAA...TTCAGTGAAGCCCACACTCCCCGATACCCAGGGACACAGAAGCCTTAGGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS GCA 90 bp ACCCGCGTGTTTTTGGCTGACTTGACTGAGGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAGTGTCTCCCTGGGGACTCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: TRVFLADLTEASLAL*SLISLKCLPGDSPA
Trigger: CGCGGGAGAGTCCCCAGGGAGACACTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACACGCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553361.5
ENST00000555231.5
ENST00000555964.5
CDS-3UTR CAA 90 bp AAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGGTGTTTTTGGCTGACTaGACTGAGGCATCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KARKQVEPVKQRVFVGVTVFLAD*TEASLA
Trigger: TGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACAC...CGTCACCCCAACAAAAACACGCTGCTTGACCGGTTCCACCTGCTTCCGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp CCAGACCCCCAGGGCCAGGATACACCGGGACCCTCCTTCCTCTCAACCTCGGATTTTACCGATTTCAGTTaGGCTTTCTTAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PDPQGQDTPGPSFLSTSDFTDFS*AFLIAA
Trigger: TGCTGCAATTAAGAAAGCCAAACTGAAATCGGTAAA...ATCCGAGGTTGAGAGGAAGGAGGGTCCCGGTGTATCCTGGCCCTGGGGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp CAGGGGGCAGGCCTCAGACGCAACCCCAGTTGGGCTTCCATGTGGAGAGAAGAATATGCTTTCTCCACCTaGTACCACACTGAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: QGAGLRRNPSWASMWREEYAFST*YHTEVL
Trigger: CAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATA...TTCTTCTCTCCACATGGAAGCCCAACTGGGGTTGCGTCTGAGGCCTGCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS GCA 90 bp ACCCGCGTGTTTTTGGCTGACTTGACTGAGGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAGTGTCTCCCTGGGGACTCGGTTGGC +
Preference number: 5 (lower is better)
Translates to: TRVFLADLTEASLAL*SLISLKCLPGDSVG
Trigger: GCCAACCGAGTCCCCAGGGAGACACTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACACGCGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000554170.1
ENST00000554913.5
ENST00000555055.6
ENST00000556980.5
ENST00000557439.5
CDS-3UTR CAA 90 bp TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTTTTACCGATTTCAGTTaGGCTTTCTTAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: CSCSGTCSCGRASAPTPCFTDFS*AFLIAA
Trigger: TGCTGCAATTAAGAAAGCCAAACTGAAATCGGTAAA...ACACGGCGTGGGGGCACTGGCTCTCCCACAACTGCATGTGCCACTGCAGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp GGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGGCATCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: GWWDMLSPPCTTLKFCGASGLER*VSLFKS
Trigger: AGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGA...TGCCCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTGTCACTCTCTGGGGCTaGGGGATGACCCGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: YCAYQAELYTFRGNFMACVTLWG*GMTRVF
Trigger: AAACACGCGGGTCATCCCCAAGCCCCAGAGAGTGAC...ACATGCCATAAAATTCCCTCTAAAAGTGTACAGTTCGGCCTGATAGGCGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS-3UTR CAA 90 bp TGGGGGTCAGTCTGTGGCCACCATCTTCGGATGAGAAAGTGGAGCCGCTGCCCTTTTACCGATTTCAGTTaGGCTTTCTTAATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: WGSVCGHHLRMRKWSRCPFTDFS*AFLIAA
Trigger: TGCTGCAATTAAGAAAGCCAAACTGAAATCGGTAAA...AGGGCAGCGGCTCCACTTTCTCATCCGAAGATGGTGGCCACAGACTGACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554913.5
ENST00000555055.6
CDS-3UTR CAA 90 bp TACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTGAGGCCACATCCCTTTaGTGGCTGGTTCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: YCAYQAELYTFRGNFMACEATSL*WLVPFP
Trigger: GGGGAAGGGAACCAGCCACAAAAGGGATGTGGCCTC...ACATGCCATAAAATTCCCTCTAAAAGTGTACAGTTCGGCCTGATAGGCGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS GCA 90 bp ACCCGCGTGTTTTTGGCTGACTTGACTGAGGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAGTGTCTCCCTGGGGACTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TRVFLADLTEASLAL*SLISLKCLPGDSGK
Trigger: CTTTCCAGAGTCCCCAGGGAGACACTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAACACGCGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553264.5
ENST00000553332.5
ENST00000556682.5
CDS GCA 90 bp AAAATGTCAGACTGTCACAACGCAGGGCAACACAGTGACAAAAGGTaGTTTGTTAAGAGCACTGTGAGAGCACCGTGCTTCCGATTCTGG +
Preference number: 5 (lower is better)
Translates to: KMSDCHNAGQHSDKR*FVKSTVRAPCFRFW
Trigger: CCAGAATCGGAAGCACGGTGCTCTCACAGTGCTCTTAACAAAGCACCTTTTGTCACTGTGTTGCCCTGCGTTGTGACAGTCTGACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553807.1
ENST00000554811.5
CDS-3UTR CAA 90 bp GGAGGTTGGTGGGATATGCTTTCTCCACCTTGTACCACACTGAAGTTTTGTGGGCTGGAACTGCATCCATaGAACATTTATTTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GGWWDMLSPPCTTLKFCGLELHP*NIYLSK
Trigger: CTTTGACAAATAAATGTTCAATGGATGCAGTTCCAG...CCCACAAAACTTCAGTGTGGTACAAGGTGGAGAAAGCATATCCCACCAACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS-3UTR CAA 90 bp GCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTAAGCATCTGGCCCGCTaGAGGCCAGGAACGTATAAA +
Preference number: 5 (lower is better)
Translates to: AFFSKFGPLDWIQERKSFKHLAR*RPGTYK
Trigger: TTTATACGTTCCTGGCCTCAAGCGGGCCAGATGCTT...AAATGACTTCCTTTCCTGGATCCAATCTAAAGGCCCGAATTTTGAAAAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS TCA 72 bp GGGTCTTCCCTGCCGAGCTGCGTCCGGCCAGCTCAGTaGTGCCGTCCAGGGGCAGGCCACCGCGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: GSSLPSCVRPAQ*CRPGAGHRGAA
Trigger: CGCTGCTCCGCGGTGGCCTGCCCCTGGACGGCATCACTGAGCTGGCCGGACGCAGCTCGGCAGGGAAGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000557439.5
CDS CCA 72 bp AGCGCGTCCAGCACCGGGCAGCCCAGGCTCAGGCGCTaGTGCTGCGTGGGGAACCGCTCCTTCTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SASSTGQPRLRR*CCVGNRSFCWC
Trigger: GCACCAGCAGAAGGAGCGGTTCCCCACGCAGCACCAGCGCCTGAGCCTGGGCTGCCCGGTGCTGGACGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555964.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 72 bp CACTCAGCCTCCAGGCCTCCGTGCTGCCGCGGGAACTaGACAGCCAGGCAGAGCTGCAGCGCCAGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: HSASRPPCCRGN*TARQSCSASWV
Trigger: GACCCAGCTGGCGCTGCAGCTCTGCCTGGCTGTGCAGTTCCCGCGGCAGCACGGAGGCCTGGAGGCTGAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553361.5
ENST00000557439.5
CDS GCA 72 bp GCAGGCCACCCTGACTGTGAGGCCTGCCCAGAGCCCTaGCCACAGCACCGTGTGTGTGGCCGTGGCACCTGC +
Preference number: 6 (lower is better)
Translates to: AGHPDCEACPEP*PQHRVCGRGTC
Trigger: GCAGGTGCCACGGCCACACACACGGTGCTGTGGGCAGGGCTCTGGGCAGGCCTCACAGTCAGGGTGGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp CCGGGAGGAGCAGCCCCTCCCTTGGAGTCTGCACACTaGCTTGGGCACCCCGTCCAGGTGGAGCAGGCCACC +
Preference number: 6 (lower is better)
Translates to: PGGAAPPLESAH*LGHPVQVEQAT
Trigger: GGTGGCCTGCTCCACCTGGACGGGGTGCCCAAGGCAGTGTGCAGACTCCAAGGGAGGGGCTGCTCCTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS TCA 72 bp CCTGGGGACTCGGTTGGCCAACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTCTGTGCACATCCTCCC +
Preference number: 6 (lower is better)
Translates to: PGDSVGQRQSGS*GSSWALCAHPP
Trigger: GGGAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCGTTGGCCAACCGAGTCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555055.6
ENST00000556980.5
ENST00000557439.5
CDS GCA 72 bp AGCCAGGCAGAGCTGCAGCGCCAGCTGGGTCTTCCCTaGCGAGCTGCGTCCGGCCAGCTCAGTGATGCCGTC +
Preference number: 6 (lower is better)
Translates to: SQAELQRQLGLP*RAASGQLSDAV
Trigger: GACGGCATCACTGAGCTGGCCGGACGCAGCTCGGCAGGGAAGACCCAGCTGGCGCTGCAGCTCTGCCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000557439.5
CDS GCA 72 bp ACGTCAGTGCGCAGCCGCGGCTGCTGGGCCATGAGCTaGTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: TSVRSRGCWAMS*CRRLCGKASSV
Trigger: CACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCACTGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555451.1
CDS GCA 72 bp GCCCCGTGTGTCGGGGCTTCTCAGGCAGGGCTGTTGTaGAGCCGCCACCGTGTCAGTGGGACTGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: APCVGASQAGLL*SRHRVSGTGSQ
Trigger: CTGGGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGAAGCCCCGACACACGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS GCA 72 bp ACCGAAGCCCCTCAGGGCAAGGCTCAAGGTGGGACATaGGGTGCAGGCTGCGCTCTTGGCCTGGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: TEAPQGKAQGGT*GAGCALGLGPG
Trigger: CCCAGGCCCCAGGCCAAGAGCGCAGCCTGCACCGCATGTCCCACCTTGAGCCTTGCCCTGAGGGGCTTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp CAGGACGGACTCCACTGGCCCCCGGTGAGTGGCCCCTaGTCTCTGCAAGGCCCTGCCATAGGTCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QDGLHWPPVSGP*SLQGPAIGPSS
Trigger: GGAGGAGGGACCTATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 72 bp CGCATCCTTCTCAGGGCGGTGGTCTCCTGGGGCAGCTaGTCAGGGGCCCACAGCCCAGAGGAGGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: RILLRAVVSWGS*SGAHSPEEVLA
Trigger: GGCAAGGACCTCCTCTGGGCTGTGGGCCCCTGACCAGCTGCCCCAGGAGACCACCGCCCTGAGAAGGATGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CAA 72 bp CGAGCCCCGTGTGTCGGGGCTTCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTCAGTGGGACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: RAPCVGASQAGL*CSRHRVSGTGS
Trigger: GGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGAAGCCCCGACACACGGGGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS TCA 72 bp CCTGGGGACTCGGTTGGCCAACGGCAGTCCGGCTCCTaGGGCTCCTCCTGGGCCCTCTGTGCACATCCTGCT +
Preference number: 6 (lower is better)
Translates to: PGDSVGQRQSGS*GSSWALCAHPA
Trigger: AGCAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAGGAGCCGGACTGCCGTTGGCCAACCGAGTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554170.1
ENST00000554913.5
CDS GCA 72 bp CCCTGCCCACAGCACCGTGTGTGTGGCCGTGGCACCTaGCCACCACGGCAGCCCCAAGTTCAGCACGTTCCT +
Preference number: 6 (lower is better)
Translates to: PCPQHRVCGRGT*PPRQPQVQHVP
Trigger: AGGAACGTGCTGAACTTGGGGCTGCCGTGGTGGGCAGGTGCCACGGCCACACACACGGTGCTGTGGGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 72 bp AGCTCTCCTGGAACGTCAGTGCGCAGCCGCGGCTGCTaGGCCATGAGCTGCTGCAGGCGCTTGTGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: SSPGTSVRSRGC*AMSCCRRLCGK
Trigger: CTTCCCGCACAAGCGCCTGCAGCAGCTCATGGCCCAGCAGCCGCGGCTGCGCACTGACGTTCCAGGAGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555451.1
CDS CCA 72 bp AGGGCTGTTGTGCAGCCGCCACCGTGTCAGTGGGACTaGGTCCCAGGTGTCCCTCGCACCCCTTCGGCACTG +
Preference number: 6 (lower is better)
Translates to: RAVVQPPPCQWD*VPGVPRTPSAL
Trigger: CAGTGCCGAAGGGGTGCGAGGGACACCTGGGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CCA 72 bp TCAGGCAGGGCTGTTGTGCAGCCGCCACCGTGTCAGTaGGACTGGGTCCCAGGTGTCCCTCGCACCCCTTCG +
Preference number: 6 (lower is better)
Translates to: SGRAVVQPPPCQ*DWVPGVPRTPS
Trigger: CGAAGGGGTGCGAGGGACACCTGGGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CCA 72 bp CCACGACACCGAAGCCCCTCAGGGCAAGGCTCAAGGTaGGACATGCGGTGCAGGCTGCGCTCTTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PRHRSPSGQGSR*DMRCRLRSWPG
Trigger: CCCAGGCCAAGAGCGCAGCCTGCACCGCATGTCCCACCTTGAGCCTTGCCCTGAGGGGCTTCGGTGTCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CAA 90 bp TTAAAGGCCCGAGCCCCGTGTGTCGGGGCTTCTCAGGCAGGGCTGTaGTGCAGCCGCCACCGTGTCAGTGGGACTGGGTCCCAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: LKARAPCVGASQAGL*CSRHRVSGTGSQVS
Trigger: GGACACCTGGGACCCAGTCCCACTGACACGGTGGCGGCTGCACAACAGCCCTGCCTGAGAAGCCCCGACACACGGGGCTCGGGCCTTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
CDS GCA 72 bp GCTGCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTaGAGATGTAGACGGCTCCAGCCTCCAGGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: AAAGACAGRRLP*RCRRLQPPGLR
Trigger: ACGGAGGCCTGGAGGCTGGAGCCGTCTACATCTGCACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
CDS CCA 72 bp GGGGGCGGAGGCCTGGCTGTCAAATTCACAGCGGAATaGGGCTGCCACCGAGTCGATGACCACCAGGCGAGC +
Preference number: 6 (lower is better)
Translates to: GGGGLAVKFTAE*GCHRVDDHQAS
Trigger: GCTCGCCTGGTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTTGACAGCCAGGCCTCCGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CCA 72 bp CTGAGACCTGGTTTCCCACACGTGGTGGTGGGACCGTaGCCAGGGCCCCATCTCACACCGTTCCCACCCTGC +
Preference number: 6 (lower is better)
Translates to: LRPGFPHVVVGP*PGPHLTPFPPC
Trigger: GCAGGGTGGGAACGGTGTGAGATGGGGCCCTGGCCACGGTCCCACCACCACGTGTGGGAAACCAGGTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp CGCTGGTGCTGCGTGGGGAACCGCTCCTTCTGCTGGTaGAGCTGCAGTGCTGTAAGGATGCTGCTTCCCCGC +
Preference number: 6 (lower is better)
Translates to: RWCCVGNRSFCW*SCSAVRMLLPR
Trigger: GCGGGGAAGCAGCATCCTTACAGCACTGCAGCTGCACCAGCAGAAGGAGCGGTTCCCCACGCAGCACCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554913.5
ENST00000555055.6
ENST00000555964.5
ENST00000556980.5
ENST00000557439.5
CDS CCA 72 bp GGGACAAGGTGGGTAGGGACCGGATCCCCTGCTCCCTaGAAACCCTGGACACAGTGTGGCCGATGCACAGGC +
Preference number: 6 (lower is better)
Translates to: GTRWVGTGSPAP*KPWTQCGRCTG
Trigger: GCCTGTGCATCGGCCACACTGTGTCCAGGGTTTCCAGGGAGCAGGGGATCCGGTCCCTACCCACCTTGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 72 bp CTCTTGCCTGCTTCTTGGCTACAGGACGGACTCCACTaGCCCCCGGTGAGTGGCCCCTGCTCTCTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LLPASWLQDGLH*PPVSGPCSLQG
Trigger: GCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGAAGCAGGCAAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS TCA 72 bp GCTCATGCCAGGACCCCGCTGCCTACTAGGGCCTGCTaGGATGCAGGGATGGAAACCTTGTCCGTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: AHARTPLPTRAC*DAGMETLSVQA
Trigger: CGCCTGGACGGACAAGGTTTCCATCCCTGCATCTCAGCAGGCCCTAGTAGGCAGCGGGGTCCTGGCATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp GGAGGCCTGGCTGTCAAATTCACAGCGGAATGGGGCTaGCACCGAGTCGATGACCACCAGGCGAGCCATGCC +
Preference number: 6 (lower is better)
Translates to: GGLAVKFTAEWG*HRVDDHQASHA
Trigger: GGCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTTGACAGCCAGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS GCA 72 bp GCTGGTCCCTGGGTGAAGTCTGCACAGCCCCTGCCCTaGACCACTGGGACCATGATGCTGGAGCCACATGTC +
Preference number: 6 (lower is better)
Translates to: AGPWVKSAQPLP*TTGTMMLEPHV
Trigger: GACATGTGGCTCCAGCATCATGGTCCCAGTGGTGCAGGGCAGGGGCTGTGCAGACTTCACCCAGGGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp GCTGCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTaGAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCC +
Preference number: 6 (lower is better)
Translates to: AAAGACAGRRLP*RCRRLLGSKSA
Trigger: GGCACTCTTGCTTCCCAGGAGCCGTCTACATCTGCACGGAAGACGCCTTCCCGCACAAGCGCCTGCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554774.1
CDS GCA 72 bp GAGGGCCGCCTGCACGCCCTGAGTGAAACTCGTCTGTaGTTCATCTCCAGGGCGTCTCTGGCCGAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: EGRLHALSETRL*FISRASLAEPL
Trigger: AAGAGGCTCGGCCAGAGACGCCCTGGAGATGAAGCACAGACGAGTTTCACTCAGGGCGTGCAGGCGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555451.1
CDS CCA 72 bp CACCAGGAGCTGGTTAGCCCAGGTTATGCCAAGGGCTaGGGAAACACGTTCGTCCCAGAACCCCAGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HQELVSPGYAKG*GNTFVPEPQRP
Trigger: GGGCCGCTGGGGTTCTGGGACGAACGTGTTTCCCCAGCCCTTGGCATAACCTGGGCTAACCAGCTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CAA 90 bp GCGCCCTTGGCCGTAACCCAGCAGAGGAAAGGGCGGGCCGTGGACTaGGAGAAGGTTTTCCCTTGGACCACACAGAATGCGGCACTGGCC +
Preference number: 6 (lower is better)
Translates to: APLAVTQQRKGRAVD*EKVFPWTTQNAALA
Trigger: GGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTTCCTCTGCTGGGTTACGGCCAAGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 72 bp TCGCGGAGCCGGTCAGCCAGCAGTCTCACCAGGAGCTaGTTAGCCCAGGTTATGCCAAGGGCTGGGGAAACA +
Preference number: 6 (lower is better)
Translates to: SRSRSASSLTRS*LAQVMPRAGET
Trigger: TGTTTCCCCAGCCCTTGGCATAACCTGGGCTAACCAGCTCCTGGTGAGACTGCTGGCTGACCGGCTCCGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS CAA 90 bp CCAGCAGAGGAAAGGGCGGGCCGTGGACTTGGAGAAGGTTTTCCCTaGGACCACACAGAATGCGGCACTGGCCTGGACACGATCACGCTG +
Preference number: 6 (lower is better)
Translates to: PAEERAGRGLGEGFP*DHTECGTGLDTITL
Trigger: CAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTTCCTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 72 bp CAATTCAAAGCCTGTGGGAGGCCCGAACCAGGGAAGTaGCAGCAGCCGAGGTGTCCGTGTCATCGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: QFKACGRPEPGK*QQPRCPCHRGS
Trigger: AGAGCCCCGATGACACGGACACCTCGGCTGCTGTCACTTCCCTGGTTCGGGCCTCCCACAGGCTTTGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553332.5
ENST00000553361.5
ENST00000554170.1
ENST00000555055.6
ENST00000555231.5
ENST00000556980.5
ENST00000557439.5
CDS TCA 72 bp CAAATTCACAGCGGAATGGGGCTGCCACCGAGTCGATaGCCACCAGGCGAGCCATGCCCCGAGACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: QIHSGMGLPPSR*PPGEPCPETAV
Trigger: TACTGCTGTCTCGGGGCATGGCTCGCCTGGTGGTCATCGACTCGGTGGCAGCCCCATTCCGCTGTGAATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000554974.5
ENST00000555055.6
CDS GCA 72 bp CTTCCCCGCAAGTGTAAGGAGGCCGTTCTCAGCAAGTaGCAGACCTCGGGGCTGGAGAGGTTGGTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: LPRKCKEAVLSK*QTSGLERLVSL
Trigger: GAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGCCTCCTTACACTTGCGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS GCA 72 bp TCTGTGCACATCCTGCTGAGAACTCCCTGCCGTGAATaGACCCCATCCATGGAGGCCCTGCTTCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SVHILLRTPCRE*TPSMEALLPCQ
Trigger: CTGGCAGGGAAGCAGGGCCTCCATGGATGGGGTGCATTCACGGCAGGGAGTTCTCAGCAGGATGTGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554170.1
CDS CCA 72 bp ACCCGCCTGGGGCTTCTCTTCCCCACTCCGTCTTCATaGGCAAGGTTGACAGATGGTGTACAGGCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: TRLGLLFPTPSS*ARLTDGVQAPS
Trigger: ACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAGAGAAGCCCCAGGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CAA 72 bp GAAAGGGCGGGCCGTGGACTTGGAGAAGGTTTTCCCTaGGACCACACAGAATGCGGCACTGGCCTGGACACG +
Preference number: 6 (lower is better)
Translates to: ERAGRGLGEGFP*DHTECGTGLDT
Trigger: CGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS GCA 72 bp GGAAAGAGTGGGAAGGTGAGTCTGGGATTGGCAGGGTaGTCAGGGATCCAAACATCAGTCGCCCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GKSGKVSLGLAG*SGIQTSVAPSS
Trigger: GCTGCTGGGGGCGACTGATGTTTGGATCCCTGAGCACCCTGCCAATCCCAGACTCACCTTCCCACTCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553264.5
ENST00000553332.5
ENST00000556682.5
CDS GCA 72 bp ACAGCCCGTGTCCACCTCACGCATCTTCTGACCCGATaGTGTGACCACAGCCCCATGGGTGTAGGACAAGCA +
Preference number: 6 (lower is better)
Translates to: TARVHLTHLLTR*CDHSPMGVGQA
Trigger: TGCTTGTCCTACACCCATGGGGCTGTGGTCACAGCATCGGGTCAGAAGATGCGTGAGGTGGACACGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS GCA 72 bp CATCACATGCCCGCAGGGATCCCCCTATGGGGCAATTaGAGCACCAGACGCCTTCAGCCAAAGCTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: HHMPAGIPLWGN*STRRLQPKLPE
Trigger: CTCTGGAAGCTTTGGCTGAAGGCGTCTGGTGCTGCAATTGCCCCATAGGGGGATCCCTGCGGGCATGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 72 bp AGGAGGCCGTTCTCAGCAAGTGCCAGACCTCGGGGCTaGAGAGGTTGGTCAGTCTCTTCAAGTCTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RRPFSASARPRG*RGWSVSSSLVQ
Trigger: CTGGACCAGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAACGGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS CCA 72 bp ACACAGAATGCGGCACTGGCCTGGACACGATCACGCTaGTCACTCGTATGCCCATGTTCAGCCTGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: TQNAALAWTRSR*SLVCPCSACSG
Trigger: CCCTGAGCAGGCTGAACATGGGCATACGAGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 72 bp AAAGGGCGGGCCGTGGACTTGGAGAAGGTTTTCCCTTaGACCACACAGAATGCGGCACTGGCCTGGACACGA +
Preference number: 6 (lower is better)
Translates to: KGRAVDLEKVFP*TTQNAALAWTR
Trigger: TCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCCACGGCCCGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 72 bp TGCTCGATGAAGATCTGGCTGCCAAATCGGAGCTTCTaGAGCAGCTCTCCTGGAACGTCAGTGCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: CSMKIWLPNRSF*SSSPGTSVRSR
Trigger: GCGGCTGCGCACTGACGTTCCAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555451.1
CDS TCA 72 bp AGGCCACTCTGCATCCCCTGTCGGCCTCCCAAATGGTaGGACCAAGAGTGTCCAGGACATGGGGAAACTGGA +
Preference number: 6 (lower is better)
Translates to: RPLCIPCRPPKW*DQECPGHGETG
Trigger: TCCAGTTTCCCCATGTCCTGGACACTCTTGGTCTCACCATTTGGGAGGCCGACAGGGGATGCAGAGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS TCA 72 bp CCGTGTCCACCTCACGCATCTTCTGACCCGATGCTGTaGCCACAGCCCCATGGGTGTAGGACAAGCAAGATG +
Preference number: 6 (lower is better)
Translates to: PCPPHASSDPML*PQPHGCRTSKM
Trigger: CATCTTGCTTGTCCTACACCCATGGGGCTGTGGTCACAGCATCGGGTCAGAAGATGCGTGAGGTGGACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS TCA 72 bp CAGCAGCAGCAGTGGCCACATCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATCGGAGCTTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: QQQQWPHRPRAR*RSGCQIGASEA
Trigger: TGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGCCACTGCTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555451.1
CDS GCA 72 bp ATGGGCTCCCGCAGGCGCGCACACATGCACACCACATaGCGTCAGTTCTCTGTGACAGATACCATTCTGGAG +
Preference number: 6 (lower is better)
Translates to: MGSRRRAHMHTT*RQFSVTDTILE
Trigger: CTCCAGAATGGTATCTGTCACAGAGAACTGACGGCATGTGGTGTGCATGTGTGCGCGCCTGCGGGAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CAA 72 bp GCTTCATCTCCAGGGCGTCTCTGGCCGAGCCTCTTTTaGTGGAAAACGACAGCAGCAGCAGTGGCCACATCG +
Preference number: 6 (lower is better)
Translates to: ASSPGRLWPSLF*WKTTAAAVATS
Trigger: CGATGTGGCCACTGCTGCTGCTGTCGTTTTCCACAAAAAGAGGCTCGGCCAGAGACGCCCTGGAGATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555451.1
CDS TCA 72 bp CTGAGGCTCCTCCTGGGCCCTCTGTGCACATCCTGCTaGGAACTTGGTTTAACAGGCCTGGCTCAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: LRLLLGPLCTSC*ELGLTGLAQSL
Trigger: GAGACTTTGAGCCAGGCCTGTTAAACCAAGTTCTCAGCAGGATGTGCACAGAGGGCCCAGGAGGAGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554913.5
CDS TCA 72 bp AGTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATaGAAAAATACTGCCACTCAGCCTCCAGGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: SEPSRCARRCHR*KNTATQPPGLR
Trigger: ACGGAGGCCTGGAGGCTGAGTGGCAGTATTTTTTCATCGGTGGCACCTCCGAGCACATCTGCTAGGCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557439.5
CDS GCA 72 bp GGACTTGGAGAAGGTTTTCCCTTGGACCACACAGAATaGGGCACTGGCCTGGACACGATCACGCTGGTCACT +
Preference number: 6 (lower is better)
Translates to: GLGEGFPLDHTE*GTGLDTITLVT
Trigger: AGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAACCTTCTCCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS GCA 72 bp GGTGTACAGGCGCCCAGTTACATCACATCGGCCACGTaGTCGATGAAGATCTGGCTGCCAAATCGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: GVQAPSYITSAT*SMKIWLPNRSF
Trigger: GAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGATGTAACTGGGCGCCTGTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 72 bp GTTTTCCCTTGGACCACACAGAATGCGGCACTGGCCTaGACACGATCACGCTGGTCACTCGTATGCCCATGT +
Preference number: 6 (lower is better)
Translates to: VFPWTTQNAALA*TRSRWSLVCPC
Trigger: ACATGGGCATACGAGTGACCAGCGTGATCGTGTCCAGGCCAGTGCCGCATTCTGTGTGGTCCAAGGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553264.5
CDS CCA 72 bp CTTCCCCACTCCGTCTTCATGGGCAAGGTTGACAGATaGTGTACAGGCGCCCAGTTACATCACATCGGCCAC +
Preference number: 6 (lower is better)
Translates to: LPHSVFMGKVDR*CTGAQLHHIGH
Trigger: GTGGCCGATGTGATGTAACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS TCA 72 bp AGGCGCCCAGTTACATCACATCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATCGGAGCTTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: RRPVTSHRPRAR*RSGCQIGASEA
Trigger: TGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGATGTAACTGGGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS CCA 72 bp AGCAATGCTGGTCTCAGCCTCTTGGCTAAAGGGCCTTaGATGAGCCATTTGACACAGCCTCCTCCACGACAC +
Preference number: 6 (lower is better)
Translates to: SNAGLSLLAKGP*MSHLTQPPPRH
Trigger: GTGTCGTGGAGGAGGCTGTGTCAAATGGCTCATCCAAGGCCCTTTAGCCAAGAGGCTGAGACCAGCATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CAA 72 bp GGGCTTCTCTTCCCCACTCCGTCTTCATGGGCAAGGTaGACAGATGGTGTACAGGCGCCCAGTTACATCACA +
Preference number: 6 (lower is better)
Translates to: GLLFPTPSSWAR*TDGVQAPSYIT
Trigger: TGTGATGTAACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAGAGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS TCA 72 bp ACTCCAACAAGGTGTCCACATCGGCCACGTGCTCGATaGAGATCTGGCTGCCAAATCGGAGCTTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TPTRCPHRPRAR*RSGCQIGASEA
Trigger: TGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGACACCTTGTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
CDS TCA 72 bp GCGCACACATGCACACCACATGCCGTCAGTTCTCTGTaGCAGATACCATTCTGGAGCAATGCTGGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: AHTCTPHAVSSL*QIPFWSNAGLS
Trigger: GCTGAGACCAGCATTGCTCCAGAATGGTATCTGTCACAGAGAACTGACGGCATGTGGTGTGCATGTGTGCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS TCA 72 bp GGCTTCTCTTCCCCACTCCGTCTTCATGGGCAAGGTTaGCAGATGGTGTACAGGCGCCCAGTTACATCACAT +
Preference number: 6 (lower is better)
Translates to: GFSSPLRLHGQG*QMVYRRPVTSH
Trigger: ATGTGATGTAACTGGGCGCCTGTACACCATCTGTCAACCTTGCCCATGAAGACGGAGTGGGGAAGAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555832.1
CDS GCA 72 bp TTCACACACTCCAACAAGGTGTCCACATCGGCCACGTaGTCGATGAAGATCTGGCTGCCAAATCGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: FTHSNKVSTSAT*SMKIWLPNRSF
Trigger: GAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGGACACCTTGTTGGAGTGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000554774.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
CDS CCA 72 bp AAGAAAAAGGCACAGCTCTGTCCAGCTGGGATGCCCTaGGGTGCTGAACAGTTCTCAAGCGGCTTTAATGGG +
Preference number: 6 (lower is better)
Translates to: KKKAQLCPAGMP*GAEQFSSGFNG
Trigger: CCCATTAAAGCCGCTTGAGAACTGTTCAGCACCCCAGGGCATCCCAGCTGGACAGAGCTGTGCCTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS CCA 72 bp GTGAAACTCGTCTGTGCTTCATCTCCAGGGCGTCTCTaGCCGAGCCTCTTTTTGTGGAAAACGACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VKLVCASSPGRL*PSLFLWKTTAA
Trigger: TGCTGCTGTCGTTTTCCACAAAAAGAGGCTCGGCCAGAGACGCCCTGGAGATGAAGCACAGACGAGTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555451.1
CDS CAA 72 bp GTTCTCAGCAAGTGCCAGACCTCGGGGCTGGAGAGGTaGGTCAGTCTCTTCAAGTCTGGTCCAGAAAAGTGT +
Preference number: 6 (lower is better)
Translates to: VLSKCQTSGLER*VSLFKSGPEKC
Trigger: ACACTTTTCTGGACCAGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS CCA 72 bp TTCTCAGCAAGTGCCAGACCTCGGGGCTGGAGAGGTTaGTCAGTCTCTTCAAGTCTGGTCCAGAAAAGTGTA +
Preference number: 6 (lower is better)
Translates to: FSASARPRGWRG*SVSSSLVQKSV
Trigger: TACACTTTTCTGGACCAGACTTGAAGAGACTGACCAACCTCTCCAGCCCCGAGGTCTGGCACTTGCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553361.5
ENST00000553807.1
ENST00000554811.5
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS CAA 72 bp CAGATACCATTCTGGAGCAATGCTGGTCTCAGCCTCTaGGCTAAAGGGCCTTGGATGAGCCATTTGACACAG +
Preference number: 6 (lower is better)
Translates to: QIPFWSNAGLSL*AKGPWMSHLTQ
Trigger: CTGTGTCAAATGGCTCATCCAAGGCCCTTTAGCCAAGAGGCTGAGACCAGCATTGCTCCAGAATGGTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554811.5
CDS TCA 72 bp AACACAGTGACAAAAGGTGCTTTGTTAAGAGCACTGTaGGAGCACCGTGCTTCCGATTCTGGGGACAAGGTG +
Preference number: 6 (lower is better)
Translates to: NTVTKGALLRAL*EHRASDSGDKV
Trigger: CACCTTGTCCCCAGAATCGGAAGCACGGTGCTCTCACAGTGCTCTTAACAAAGCACCTTTTGTCACTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553807.1
ENST00000554811.5
CDS TCA 72 bp ACTTCCCAGGAAAGACAGAACAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTCAAAGCCTGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: TSQERQNNGCKF*GTRLQFKACGR
Trigger: CCTCCCACAGGCTTTGAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATTGTTCTGTCTTTCCTGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553332.5
ENST00000553361.5
ENST00000554170.1
ENST00000555055.6
ENST00000555231.5
ENST00000556980.5
ENST00000557439.5
CDS TCA 72 bp TCCAAATCCATTTTGTCGGTGGGCTGGCCACCAGGATaGATAACTTCCCAGGAAAGACAGAACAATGGATGC +
Preference number: 6 (lower is better)
Translates to: SKSILSVGWPPG*ITSQERQNNGC
Trigger: GCATCCATTGTTCTGTCTTTCCTGGGAAGTTATTCATCCTGGTGGCCAGCCCACCGACAAAATGGATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553332.5
ENST00000553361.5
ENST00000554170.1
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5
CDS TCA 72 bp ACTTCCCAGGAAAGACAGAACAATGGATGCAAATTCTaGGGCACTCGCCTTCAATTCAAAGCCTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: TSQERQNNGCKF*GTRLQFKASLG
Trigger: CCCCAGAGAGGCTTTGAATTGAAGGCGAGTGCCTCAGAATTTGCATCCATTGTTCTGTCTTTCCTGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554913.5
ENST00000555964.5
ENST00000556682.5
CDS GCA 72 bp TTTTTGGCTGACTTGACTGAGGCATCTCTTGCACTCTaGAGTTTAATTTCCCTTAAGTGTCTCCCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: FLADLTEASLAL*SLISLKCLPGD
Trigger: GTCCCCAGGGAGACACTTAAGGGAAATTAAACTGCAGAGTGCAAGAGATGCCTCAGTCAAGTCAGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352127.11
ENST00000553264.5
ENST00000553332.5
ENST00000553361.5
ENST00000554170.1
ENST00000554913.5
ENST00000555055.6
ENST00000555231.5
ENST00000555964.5
ENST00000556682.5
ENST00000556980.5
ENST00000557439.5