Pregenerated sensors for XRCC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000196584Ensembl transcript IDs: ENST00000359321.2, ENST00000495707.1
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAATGTCAAATTATATGCTTTTCTTGCCACGTATTCTAAGTCTGTaGGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTCCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LMSNYMLFLPRILSL*EGVCVCVCVCCSLL Trigger: AAGAAGGGAACAACACACACACACACACACACACACACCCTCTCACAGACTTAGAATACGTGGCAAGAAAAGCATATAATTTGACATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 90 bp | TCAATCTTTTCCATATGGCTGGCCAGTTATCCCAGCACGATTTATTaGATAGAGAATCCATTGCCCATTGCTTGTTTTTGTCAGGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SIFSIWLASYPSTIY*IENPLPIACFCQVH Trigger: ATGAACCTGACAAAAACAAGCAATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCATATGGAAAAGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR GCA 90 bp | TTACGTATAGATGCTGGATTTCAGACCTTTCTCAGATGCATAGTTTaGAACAATTTTCTCCCATTCTGTAAGCTGTCTGTTTACTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LRIDAGFQTFLRCIV*NNFLPFCKLSVYSL Trigger: AAGAGAGTAAACAGACAGCTTACAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCAGCATCTATACGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CCA 90 bp | ATGATTGGTGTGGATGGAGTTAAATACACCATCTCCTCTGTGCTTTaGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAAATCAG | + |
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Preference number: 1 (lower is better) Translates to: MIGVDGVKYTISSVL*ICPAVFGSFKFKNQ Trigger: CTGATTTTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGGTGTATTTAACTCCATCCACACCAATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTACCGAGATTGTGCCACTaGACTCCAGCAGCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLPRLCH*TPAAWE Trigger: CTCCCAGGCTGCTGGAGTGCAGTGGCACAATCTCGG...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTCCAAGAGGCAGAGGCTaGAGCGGGCCGAGATTGTGC | + |
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Preference number: 2 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGPRGRG*SGPRLC Trigger: GCACAATCTCGGCCCGCTGCAGCCTCTGCCTCTTGG...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAAGCGGGCCGAGATTGTaGCACTGCACTCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: ISSVLWICPAVFGSFKFKSGPRL*HCTPAA Trigger: GGCTGCTGGAGTGCAGTGGCACAATCTCGGCCCGCT...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGCTTTGGAGGCTGAGGTaGAGGCTCACTGGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KICFSLQECVYVKLNERWLWRLR*RLTGTQ Trigger: CTGGGTTCCAGTGAGCCTCCACCTCAGCCTCCAAAG...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATTCTTTTCCATATGGCTaGCCAGTTATCCCAGCACGA | + |
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Preference number: 2 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDSFPYG*PVIPAR Trigger: TCGTGCTGGGATAACTGGCCAGCCATATGGAAAAGA...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAGCAACCTCCACCTCCTaGGTTCCAGCAATTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLATSTS*VPAILL Trigger: CAGGAGAATTGCTGGAACCCAGGAGGTGGAGGTTGC...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCATAGGAGGATCCCTTaGGGCCAGGAGTTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: WISDLSQMHSLQQFSPILHRRIP*GQEFKA Trigger: AGCCTTGAACTCCTGGCCTCAAGGGATCCTCCTATG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAATTCCAGCAATTCTCCTaGCTCGGCCTCCTGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: ISSVLWICPAVFGSFKFKFQQFS*LGLLSS Trigger: GCTACTCAGGAGGCCGAGGCAGGAGAATTGCTGGAA...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAAATCCAGTCTGTCACTaGTGGGCAGTGCTGCAACGA | + |
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Preference number: 2 (lower is better) Translates to: ISSVLWICPAVFGSFKFKNPVCH*WAVLQR Trigger: TCGTTGCAGCACTGCCCATCAGTGACAGACTGGATT...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTCCATTTGGACTGGTGTaGGATGGTATCTCGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGPFGLV*DGISLL Trigger: CAACAACGAGATACCATCTCACACCAGTCCAAATGG...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATGCTTGCGTAGTACCCTaGAAAAGACTATTTTATGAT | + |
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Preference number: 2 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDACVVP*KRLFYD Trigger: ATCATAAAATAGTCTTTTGCAGGGTACTACGCAAGC...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATCTCAGATGCATAGTTTaGAACAATTTTCTCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDLRCIV*NNFLPF Trigger: GAATGGGAGAAAATTGTTGCAAACTATGCATCTGAG...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTATCAATCTTTTCCATATaGCTGGCCAGTTATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLSIFSI*LASYPS Trigger: GCTGGGATAACTGGCCAGCCATATGGAAAAGATTGA...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CAA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTaGAATGGTATCTCTGTCTTTATCCCCACACTGTCTTCCACAATG | + |
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Preference number: 2 (lower is better) Translates to: DFYSFGYIPSNEIAG*NGISVFIPTLSSTM Trigger: CATTGTGGAAGACAGTGTGGGGATAAAGACAGAGATACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCCCAGCACGATTTATTaGATAGAGAATCCATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: WISDLSQMHSLQQFSPILPSTIY*IENPLP Trigger: GGGCAATGGATTCTCTATTCAATAAATCGTGCTGGG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGGCTCCCACTTATAAGTaGAAACATGCAGTATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KICFSLQECVYVKLNERWAPTYK*KHAVSG Trigger: ACCAGATACTGCATGTTTTCACTTATAAGTGGGAGC...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATCAGCTTTGTTCTTTTTaGTTAGGATTGCCTTACTAT | + |
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Preference number: 2 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDQLCSF*LGLPYY Trigger: ATAGTAAGGCAATCCTAAGCAAAAAGAACAAAGCTG...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTATCTGTTCATGTCCTTTaGCCACTTTTTAATGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLSVHVL*PLFNGV Trigger: CACCCCATTAAAAAGTGGGCAAAGGACATGAACAGA...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGCTGAATGGTACTGCCTaGGTTGTCTTCCAGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: LHFHQQCISISFSPQPHQLNGTA*VVFQDF Trigger: AAAATCCTGGAAGACAACCCAGGCAGTACCATTCAG...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CAA 90 bp | TTCAATCTTTTCCATATGGCTGGCCAGTTATCCCAGCACGATTTATaGAATAGAGAATCCATTGCCCATTGCTTGTTTTTGTCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: FNLFHMAGQLSQHDL*NRESIAHCLFLSGS Trigger: TGAACCTGACAAAAACAAGCAATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCATATGGAAAAGATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGAATAGCCATTTGGACTaGTGTGAGATGGTATCTCGT | + |
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Preference number: 2 (lower is better) Translates to: LHFHQQCISISFSPQPHQNSHLD*CEMVSR Trigger: ACGAGATACCATCTCACACCAGTCCAAATGGCTATT...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTTTGTGCCAGTACTATaGTGTTTTGGTTACTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: WISDLSQMHSLQQFSPILFVPVL*CFGYCS Trigger: GCTACAGTAACCAAAACAGCATAGTACTGGCACAAA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAACAGATGTCTTCTTTTaGAAAGTGTCTGTTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: ISSVLWICPAVFGSFKFKTDVFF*KVSVHV Trigger: GACATGAACAGACACTTTTCAAAAGAAGACATCTGT...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTGTTAATTTTTGTATATaGCATAAGGAAGGCGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGVNFCI*HKEGVH Trigger: ATGGACGCCTTCCTTATGCCATATACAAAAATTAAC...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTTTTATAATAGCCATTTaGACTGGTGTGAGATGGTAT | + |
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Preference number: 2 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGFIIAI*TGVRWY Trigger: ATACCATCTCACACCAGTCCAAATGGCTATTATAAA...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CAA 90 bp | TTTGCAACAATTTTCTCCCATTCTGTAAGCTGTCTGTTTACTCTCTaGATAGTTTCTTTTGCTGTGCAGCTCTTTAGTTTAATTAGATCC | + |
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Preference number: 2 (lower is better) Translates to: FATIFSHSVSCLFTL*IVSFAVQLFSLIRS Trigger: GGATCTAATTAAACTAAAGAGCTGCACAGCAAAAGAAACTATCAAGAGAGTAAACAGACAGCTTACAGAATGGGAGAAAATTGTTGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATGCCCATTGCTTGTTTTaGTCAGGTTCATCGAAGATC | + |
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Preference number: 3 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDAHCLF*SGSSKI Trigger: GATCTTCGATGAACCTGACAAAAACAAGCAATGGGC...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATATGGTACTGCCTGGGTaGTCTTCCAGGATTTTTACT | + |
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Preference number: 3 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDMVLPG*SSRIFT Trigger: AGTAAAAATCCTGGAAGACAACCCAGGCAGTACCAT...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 72 bp | GTCTTCGTCATGAAATCTTTGCCTGTGCCTATGTCCTaGATGGTACTGCCTGGGTTGTCTTCCAGGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: VFVMKSLPVPMS*MVLPGLSSRIF Trigger: AAAAATCCTGGAAGACAACCCAGGCAGTACCATTCAGGACATAGGCACAGGCAAAGATTTCATGACGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATAGTCTACGTGTGTTTTaGTGCCAGTACTATGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDSLRVF*CQYYAV Trigger: AACAGCATAGTACTGGCACAAAAACACACGTAGACT...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 72 bp | TTGCTTCTGTTGCAATTGTTTTTGGCGTCTTCGTCATaGAATCTTTGCCTGTGCCTATGTCCTGAATGGTAC | + |
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Preference number: 3 (lower is better) Translates to: LLLLQLFLASSS*NLCLCLCPEWY Trigger: GTACCATTCAGGACATAGGCACAGGCAAAGATTTCATGACGAAGACGCCAAAAACAATTGCAACAGAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 72 bp | CCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTaGATGGTATCTCTGTCTTTATCCCCACACTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PLGIYPVMRLLG*MVSLSLSPHCL Trigger: AAGACAGTGTGGGGATAAAGACAGAGATACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTATCCATTGCCCATTGCTaGTTTTTGTCAGGTTCATCG | + |
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Preference number: 3 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLSIAHC*FLSGSS Trigger: CGATGAACCTGACAAAAACAAGCAATGGGCAATGGA...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATCACAGATGTCTTCTTTaGAAAAGTGTCTGTTCATGT | + |
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Preference number: 3 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDHRCLL*KSVCSC Trigger: ACATGAACAGACACTTTTCAAAAGAAGACATCTGTG...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 72 bp | TCCATATGGCTGGCCAGTTATCCCAGCACGATTTATTaGATAGAGAATCCATTGCCCATTGCTTGTTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SIWLASYPSTIY*IENPLPIACFC Trigger: ACAAAAACAAGCAATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCATATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR TCA 72 bp | AATTATATGCTTTTCTTGCCACGTATTCTAAGTCTGTaGGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: NYMLFLPRILSL*EGVCVCVCVCC Trigger: ACAACACACACACACACACACACACACACCCTCTCACAGACTTAGAATACGTGGCAAGAAAAGCATATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAGTGATGCCTCCAGCTTaGTTCTTTTTGCTTAGGATT | + |
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Preference number: 3 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLVMPPA*FFLLRI Trigger: AATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCAC...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTTCCCAGCACGATTTATaGAATAGAGAATCCATTGCC | + |
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Preference number: 3 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGSQHDL*NRESIA Trigger: GGCAATGGATTCTCTATTCAATAAATCGTGCTGGGA...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGAATGAGATTGCTGGGTaGAATGGTATCTCTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KICFSLQECVYVKLNERWNEIAG*NGISVF Trigger: AAAGACAGAGATACCATTCAACCCAGCAATCTCATT...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAGTGTGTGTGTGTGTGTaGTTCCCTTCTTTGTATCCA | + |
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Preference number: 3 (lower is better) Translates to: ISSVLWICPAVFGSFKFKVCVCV*FPSLYP Trigger: TGGATACAAAGAAGGGAACAACACACACACACACAC...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CCA 72 bp | GTGGATGGAGTTAAATACACCATCTCCTCTGTGCTTTaGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTT | + |
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Preference number: 3 (lower is better) Translates to: VDGVKYTISSVL*ICPAVFGSFKF Trigger: AAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGGTGTATTTAACTCCATCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGCCAGCTTTGTTCTTTTaGCTTAGGATTGCCTTACTA | + |
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Preference number: 3 (lower is better) Translates to: LHFHQQCISISFSPQPHQPALFF*LRIALL Trigger: TAGTAAGGCAATCCTAAGCAAAAAGAACAAAGCTGG...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR-3UTR CAA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGTTTTCCATAGGATTGTaGGCCACAGATGTCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHFHQQCISISFSPQPHQFSIGL*ATDVFF Trigger: AAAGAAGACATCTGTGGCCAACAATCCTATGGAAAA...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR TCA 72 bp | TCCAGGAGTTCTCATCATTTAGCTCCCACTTATAAGTaGAAACATGCAGTATCTGGTTTTCTGTTCCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSHHLAPTYK*KHAVSGFLFLC Trigger: ACATAGGAACAGAAAACCAGATACTGCATGTTTTCACTTATAAGTGGGAGCTAAATGATGAGAACTCCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR CCA 72 bp | CCATTTGTGAATTTTTGCTTCTGTTGCAATTGTTTTTaGCGTCTTCGTCATGAAATCTTTGCCTGTGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PFVNFCFCCNCF*RLRHEIFACAY Trigger: ATAGGCACAGGCAAAGATTTCATGACGAAGACGCCAAAAACAATTGCAACAGAAGCAAAAATTCACAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTTGTCTGTTTACTCTCTaGATAGTTTCTTTTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGCLFTL*IVSFAV Trigger: CACAGCAAAAGAAACTATCAAGAGAGTAAACAGACA...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAATGTTCCTATGTTAGTTaGCTAAGGATAATAGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISSVLWICPAVFGSFKFKCSYVS*LRIIAS Trigger: GGACGCTATTATCCTTAGCAAACTAACATAGGAACA...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR CCA 72 bp | GACATTTTTATAATAGCCATTTGGACTGGTGTGAGATaGTATCTCGTTGTTGTTTCGATTTGCATTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DIFIIAIWTGVR*YLVVVSICISL Trigger: TAGAGAAATGCAAATCGAAACAACAACGAGATACCATCTCACACCAGTCCAAATGGCTATTATAAAAATGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGCCAGTTATCCCAGCACGATTTATTGAATAGAGAATCCATTGCCCATCCGAGATTGTGCCACTaGACTCCAGCAGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MAGQLSQHDLLNRESIAHPRLCH*TPAAWE Trigger: CTCCCAGGCTGCTGGAGTGCAGTGGCACAATCTCGG...ATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAACCTGCCTCGGCCTCCTaGGTAGCTGGCACTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLWICPAVFGSFKFKPASAS*VAGTTG Trigger: GCCTGTAGTGCCAGCTACTCAGGAGGCCGAGGCAGG...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGAGCGGGCCGAGATTGTaGCACTGCACTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILSGPRL*HCTPAA Trigger: GGCTGCTGGAGTGCAGTGGCACAATCTCGGCCCGCT...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCCAAGAGGCAGAGGCTaGAGCGGGCCGAGATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILPRGRG*SGPRLC Trigger: GCACAATCTCGGCCCGCTGCAGCCTCTGCCTCTTGG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGGAGGTGGAGGCTCACTaGAACCCAGGAGTTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQEVEAH*NPGVRG Trigger: GCCTCGAACTCCTGGGTTCCAGTGAGCCTCCACCTC...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGGCAACCTCCACCTCCTaGGTTCCAGCAATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWATSTS*VPAILL Trigger: CAGGAGAATTGCTGGAACCCAGGAGGTGGAGGTTGC...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCTTTGGAGGCTGAGGTaGAGGCTCACTGGAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILLWRLR*RLTGTQ Trigger: CTGGGTTCCAGTGAGCCTCCACCTCAGCCTCCAAAG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTCATAGGAGGATCCCTTaGGGCCAGGAGTTCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGHRRIP*GQEFKA Trigger: AGCCTTGAACTCCTGGCCTCAAGGGATCCTCCTATG...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGAGCTACTTTGGAGGCTaGGGTGGAGGCTCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQSYFGG*GGGSLE Trigger: TTCCAGTGAGCCTCCACCTCAGCCTCCAAAGTAGCT...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGTTCCAGCAATTCTCCTaGCTCGGCCTCCTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQFQQFS*LGLLSS Trigger: GCTACTCAGGAGGCCGAGGCAGGAGAATTGCTGGAA...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATCTGAATGGTACTGCCTaGGTTGTCTTCCAGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDLNGTA*VVFQDF Trigger: AAAATCCTGGAAGACAACCCAGGCAGTACCATTCAG...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAACCAGACTCAGCCCTATaGAAGGCACTACACATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLWICPAVFGSFKFKPDSAL*KALHIA Trigger: GGCGATGTGTAGTGCCTTCCATAGGGCTGAGTCTGG...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATAGTGTAAGAAGTAAGTaGGTGCTACTACTGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDSVRSK*VLLLQY Trigger: GTACTGCAGTAGTAGCACCCACTTACTTCTTACACT...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGCACTTTCTCCTCCATTaGCGCGGTCTATCCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWHFLLH*RGLSSK Trigger: TTTACTGGATAGACCGCGTCAATGGAGGAGAAAGTG...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGAGTCGTCGAGAGGCATaGGAAGGTTCTTCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILSRREA*EGSSDE Trigger: CTCATCAGAAGAACCTTCTCATGCCTCTCGACGACT...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCTGTGCTTCACCAGTTaGTGCCATGCCTTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILLCFTS*CHALQR Trigger: TCTCTGTAAGGCATGGCAGCAACTGGTGAAGCACAG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATTTTGTGCCAGTACTATaGTGTTTTGGTTACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDFVPVL*CFGYCS Trigger: GCTACAGTAACCAAAACAGCATAGTACTGGCACAAA...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTACACCATCTCCTCTGTaGTTTGGATCTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGTPSPL*FGSVLL Trigger: CAGCAGGACAGATCCAAAGCACAGAGGAGATGGTGT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR CAA 72 bp | TCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTaGAATGGTATCTCTGTCTTTATCCCCACACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGYIPSNEIAG*NGISVFIPTLS Trigger: AGACAGTGTGGGGATAAAGACAGAGATACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTTCCAGGCCACCTTCTaGTTTGGGAAGTATACATCG | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILFQATF*FGKYTS Trigger: CGATGTATACTTCCCAAATCAGAAGGTGGCCTGGAA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCACCAGTTGCTGCCATaGCTTACAGAGATAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILHQLLP*LTEIRS Trigger: AGACCTTATCTCTGTAAGGCATGGCAGCAACTGGTG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTGGCCACCTTCTGATTTaGGAAGTATACATCGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGGHLLI*EVYIVL Trigger: CAGCACGATGTATACTTCCCAAATCAGAAGGTGGCC...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTCTTTTCCATATGGCTaGCCAGTTATCCCAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILSFPYG*PVIPAR Trigger: TCGTGCTGGGATAACTGGCCAGCCATATGGAAAAGA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGTCAATCTTTTCCATATaGCTGGCCAGTTATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWSIFSI*LASYPS Trigger: GCTGGGATAACTGGCCAGCCATATGGAAAAGATTGA...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| 3UTR CAA 72 bp | TTCCATATGGCTGGCCAGTTATCCCAGCACGATTTATaGAATAGAGAATCCATTGCCCATTGCTTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FHMAGQLSQHDL*NRESIAHCLFL Trigger: CAAAAACAAGCAATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCATATGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGCCCAGCACGATTTATTaGATAGAGAATCCATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQPSTIY*IENPLP Trigger: GGGCAATGGATTCTCTATTCAATAAATCGTGCTGGG...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGGCCAGTTATCCCAGCACGATTTATTGAATAGAGAATCCATTGCCCATACAGATGTCTTCTTTTaGAAAGTGTCTGTTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MAGQLSQHDLLNRESIAHTDVFF*KVSVHV Trigger: GACATGAACAGACACTTTTCAAAAGAAGACATCTGT...ATGGGCAATGGATTCTCTATTCAATAAATCGTGCTGGGATAACTGGCCAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAACCATTTGGACTGGTGTaGGATGGTATCTCGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLWICPAVFGSFKFKPFGLV*DGISLL Trigger: CAACAACGAGATACCATCTCACACCAGTCCAAATGG...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGGAGCTCGAGGCTTTCTaGATTATAGTTTGTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWELEAF*IIVCVV Trigger: AACGACACAAACTATAATGCAGAAAGCCTCGAGCTC...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGGAGAAAAACATCCTGTaGTTCACCAGTTGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQEKNIL*FTSCCH Trigger: ATGGCAGCAACTGGTGAAGCACAGGATGTTTTTCTC...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGATCTCCTCTGTGCTTTaGATCTGTCCTGCTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFHQQCISISFSPQPHQISSVL*ICPAVF Trigger: GAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGGCTCCCACTTATAAGTaGAAACATGCAGTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILAPTYK*KHAVSG Trigger: ACCAGATACTGCATGTTTTCACTTATAAGTGGGAGC...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGCTTTGGGATAGTCTGTaGTCAAGAATTGTAACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWLWDSL*SRIVTS Trigger: GCTAGTTACAATTCTTGAGCACAGACTATCCCAAAG...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTCTGTTCATGTCCTTTaGCCACTTTTTAATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILSVHVL*PLFNGV Trigger: CACCCCATTAAAAAGTGGGCAAAGGACATGAACAGA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTACAGTTGTGAGCCACTaGACTCAGCCTAAAATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGTVVSH*TQPKIL Trigger: TAGAATTTTAGGCTGAGTGCAGTGGCTCACAACTGT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGAATAGCCATTTGGACTaGTGTGAGATGGTATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILNSHLD*CEMVSR Trigger: ACGAGATACCATCTCACACCAGTCCAAATGGCTATT...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR CCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTAACTGTCATTTTAACTaGAGTCCTCAGTCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGNCHFN*SPQSLC Trigger: GCAAAGGGACTGAGGACTCCAGTTAAAATGACAGTT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAAGCTTCTCTAAGCACTaGGAACATTTCCTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLWICPAVFGSFKFKSFSKH*EHFLRV Trigger: TACTCTGAGGAAATGTTCTCAGTGCTTAGAGAAGCT...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTAATTGGTTGCTGCTTTaGGAATCATCTTGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGNWLLL*ESSCLE Trigger: CTCCAAACAAGATGATTCTCAAAGCAGCAACCAATT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTACTTGCTTTACTGTGTTaGCACTTTCAGTACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLLALLC*HFQYNV Trigger: AACATTGTACTGAAAGTGTCAACACAGTAAAGCAAG...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTATCAAGAATATCACCATaGACAGGTGAATCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLSRISP*TGESSS Trigger: TGATGAAGATTCACCTGTGCATGGTGATATTCTTGA...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR GCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGTATAGTTTGTGTCGTTaGAAAAAGAACCAGGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWYSLCR*KKNQAI Trigger: TATCGCCTGGTTCTTTTTGCAACGACACAAACTATA...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR TCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTTATCCAGTAAAAAGCTaGCAGGCTATCCAAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGYPVKS*QAIQNQ Trigger: TTGATTTTGGATAGCCTGTCAGCTTTTTACTGGATA...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR TCA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAAATGAGATTGCTGGGTTaGATGGTATCTCTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLWICPAVFGSFKFKMRLLG*MVSLSL Trigger: TAAAGACAGAGATACCATTCAACCCAGCAATCTCAT...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR GCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTGCTTGCGTAGTACCCTaGAAAAGACTATTTTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGACVVP*KRLFYD Trigger: ATCATAAAATAGTCTTTTGCAGGGTACTACGCAAGC...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR GCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTCTCAGATGCATAGTTTaGAACAATTTTCTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGLRCIV*NNFLPF Trigger: GAATGGGAGAAAATTGTTGCAAACTATGCATCTGAG...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGGTTAATTTTTGTATATaGCATAAGGAAGGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWVNFCI*HKEGVH Trigger: ATGGACGCCTTCCTTATGCCATATACAAAAATTAAC...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CCA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGTTTATAATAGCCATTTaGACTGGTGTGAGATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KICFSLQECVYVKLNERWFIIAI*TGVRWY Trigger: ATACCATCTCACACCAGTCCAAATGGCTATTATAAA...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CCA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTCTGTATAGTATTCCCTaGTGTGTATGTACCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGLYSIP*CVCTTF Trigger: AAATGTGGTACATACACACCAGGGAATACTATACAG...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| 3UTR CAA 72 bp | TCCTTGCTTTACTGTGTTGACACTTTCAGTACAATGTaGAATACAAGTAGTAATAGCAGGCACTCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYCVDTFSTM*NTSSNSRHSCS Trigger: AGAACAAGAGTGCCTGCTATTACTACTTGTATTCAACATTGTACTGAAAGTGTCAACACAGTAAAGCAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR GCA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCAGCTTTGTTCTTTTTaGTTAGGATTGCCTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: WISDLSQMHSLQQFSPILQLCSF*LGLPYY Trigger: ATAGTAAGGCAATCCTAAGCAAAAAGAACAAAGCTG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS GCA 90 bp | ATCTTGTTTGGAGAAAAACATCCTGTGCTTCACCAGTTGCTGCCATaGCTTACAGAGATAAGGTCTGTAGTCTATGTCCACATCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ILFGEKHPVLHQLLP*LTEIRSVVYVHITQ Trigger: CTGTGTGATGTGGACATAGACTACAGACCTTATCTCTGTAAGGCATGGCAGCAACTGGTGAAGCACAGGATGTTTTTCTCCAAACAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359321.2 ENST00000495707.1 |
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| CDS-3UTR CAA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAACCTGTGCTTCACCAGTaGCTGCCATGCCTTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISSVLWICPAVFGSFKFKPVLHQ*LPCLTE Trigger: CTCTGTAAGGCATGGCAGCAACTGGTGAAGCACAGG...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGGTAATCACAGCTACTTaGGAGGCTGAGGTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHFHQQCISISFSPQPHQVITAT*EAEVEA Trigger: AGCCTCCACCTCAGCCTCCAAAGTAGCTGTGATTAC...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TTTGCTAAGGATAATAGCGTCCAGCTCCATCCATGTCCCTGGCAAAGGTATGATTTTTCCATAGGATTGTaGGCCACAGATGTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FAKDNSVQLHPCPWQRYDFSIGL*ATDVFF Trigger: AAAGAAGACATCTGTGGCCAACAATCCTATGGAAAA...ATCATACCTTTGCCAGGGACATGGATGGAGCTGGACGCTATTATCCTTAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTAGGCCACCTTCTGATTaGGGAAGTATACATCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGRPPSD*GSIHRA Trigger: AGCACGATGTATACTTCCCAAATCAGAAGGTGGCCT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGTCCATTGCCCATTGCTaGTTTTTGTCAGGTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KICFSLQECVYVKLNERWSIAHC*FLSGSS Trigger: CGATGAACCTGACAAAAACAAGCAATGGGCAATGGA...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAGTCTACGTGTGTTTTaGTGCCAGTACTATGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLSLRVF*CQYYAV Trigger: AACAGCATAGTACTGGCACAAAAACACACGTAGACT...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGTCCCAGCACGATTTATaGAATAGAGAATCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KICFSLQECVYVKLNERWSQHDL*NRESIA Trigger: GGCAATGGATTCTCTATTCAATAAATCGTGCTGGGA...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | GATTTCTATTCCTTTGGGTATATACCCAGTAATGAGATTGCTGGGTTGAATGGTATGGTACTGCCTGGGTaGTCTTCCAGGATTTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: DFYSFGYIPSNEIAGLNGMVLPG*SSRIFT Trigger: AGTAAAAATCCTGGAAGACAACCCAGGCAGTACCAT...ACCATTCAACCCAGCAATCTCATTACTGGGTATATACCCAAAGGAATAGAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAACACGCCCAGTCAGTCTaGTTCCTTTTTATGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ISSVLWICPAVFGSFKFKHAQSV*FLFMAV Trigger: TACAGCCATAAAAAGGAACAAGACTGACTGGGCGTG...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGAGAATCCATTGCCCATaGCTTGTTTTTGTCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILRIHCP*LVFVRF Trigger: GAACCTGACAAAAACAAGCAATGGGCAATGGATTCT...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTTGCTTCTGTTGCAATaGTTTTTGGCGTCTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILLLLLQ*FLASSS Trigger: TGACGAAGACGCCAAAAACAATTGCAACAGAAGCAA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | AAGATTTGCTTCAGCCTCCAAGAGTGTGTTTACGTAAAATTAAATGAGCGCTGGAAATTGGTTGCTGCTTaGAGAATCATCTTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KICFSLQECVYVKLNERWKLVAA*RIILFG Trigger: TCCAAACAAGATGATTCTCAAAGCAGCAACCAATTT...CCAGCGCTCATTTAATTTTACGTAAACACACTCTTGGAGGCTGAAGCAAATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCCAGCTTTGTTCTTTTaGCTTAGGATTGCCTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILPALFF*LRIALL Trigger: TAGTAAGGCAATCCTAAGCAAAAAGAACAAAGCTGG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTACACAGATGTCTTCTTTaGAAAAGTGTCTGTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLHRCLL*KSVCSC Trigger: ACATGAACAGACACTTTTCAAAAGAAGACATCTGTG...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | CCATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTACGTTGTTGTTTCGATTaGCATTTCTCTAATGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLCFGSVLLYSVLLNLRCCFD*HFSNDQ Trigger: CTGATCATTAGAGAAATGCAAATCGAAACAACAACG...TAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TTACATTTCCACCAACAGTGTATAAGCATATCTTTTTCTCCACAACCTCACCAGAATGAGATTGCTGGGTaGAATGGTATCTCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHFHQQCISISFSPQPHQNEIAG*NGISVF Trigger: AAAGACAGAGATACCATTCAACCCAGCAATCTCATT...CTGGTGAGGTTGTGGAGAAAAAGATATGCTTATACACTGTTGGTGGAAATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTGTTCCTATGTTAGTTaGCTAAGGATAATAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILCSYVS*LRIIAS Trigger: GGACGCTATTATCCTTAGCAAACTAACATAGGAACA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTCTCAGATGCATAGTTaGCAACAATTTTCTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILSQMHS*QQFSPI Trigger: AATGGGAGAAAATTGTTGCAAACTATGCATCTGAGA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGTATCAATGTCTAATGTaGATACTTTTCCCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILYQCLM*ILFPFS Trigger: GGAGAAGGGGAAAAGTATCAACATTAGACATTGATA...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | TGGATTTCAGACCTTTCTCAGATGCATAGTTTGCAACAATTTTCTCCCATTCTGCAGGCACTCTTGTTCTaGATTTTAAAAGAGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: WISDLSQMHSLQQFSPILQALLF*ILKETL Trigger: AAGTGTCTCTTTTAAAATCAAGAACAAGAGTGCCTG...CAGAATGGGAGAAAATTGTTGCAAACTATGCATCTGAGAAAGGTCTGAAATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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| CDS-3UTR CAA 90 bp | ATCTCCTCTGTGCTTTGGATCTGTCCTGCTGTATTCGGTTCTTTTAAATTTAAATGTCTGTTTACTCTCTaGATAGTTTCTTTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISSVLWICPAVFGSFKFKCLFTL*IVSFAV Trigger: CACAGCAAAAGAAACTATCAAGAGAGTAAACAGACA...TTTAAATTTAAAAGAACCGAATACAGCAGGACAGATCCAAAGCACAGAGGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359321.2 |
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