RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143324

Ensembl transcript IDs: ENST00000367589.3, ENST00000367590.9, ENST00000464817.1, ENST00000467345.1, ENST00000498177.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCTAACTaGCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCT +
Preference number: 1 (lower is better)
Translates to: WRHHLRVIRLTYFPN*LAAAYCQRPTSSCS
Trigger: AGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 90 bp GACCCTTTAGGGATTTTCCACAATCTTTCCCTCCAATTCCCACCATaGTGGTGTTGCTACAGGGCAATCAGGGAAGTGCAGGTAGGGACT +
Preference number: 1 (lower is better)
Translates to: DPLGIFHNLSLQFPP*WCCYRAIREVQVGT
Trigger: AGTCCCTACCTGCACTTCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGATTGTGGAAAATCCCTAAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 90 bp GTCATCAGGCTCACGTACTTTCCTAACTGCCTTGCTGCGGCTTACTaGCAACGTCCAACATCTTCTTGCTCTTCTCTGCTATCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: VIRLTYFPNCLAAAY*QRPTSSCSSLLSPK
Trigger: CTTTGGAGATAGCAGAGAAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAGCCTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 90 bp CCTTTAGGGATTTTCCACAATCTTTCCCTCCAATTCCCACCATGCTaGTGTTGCTACAGGGCAATCAGGGAAGTGCAGGTAGGGACTTCA +
Preference number: 1 (lower is better)
Translates to: PLGIFHNLSLQFPPC*CCYRAIREVQVGTS
Trigger: TGAAGTCCCTACCTGCACTTCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGATTGTGGAAAATCCCTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 90 bp GAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGTCCTTGCAATaGCTGTTCTTCATCCTGATAGGTATCTATGTCCTTGTGATTGTA +
Preference number: 1 (lower is better)
Translates to: EAEISQYRPIRGSLQ*LFFILIGIYVLVIV
Trigger: TACAATCACAAGGACATAGATACCTATCAGGATGAAGAACAGGCATTGCAAGGACCCTCTGATGGGACGGTACTGAGATATCTCGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR TCA 90 bp GGCAACTCAGTATCAGTTTTGATAATTCATACAAGAAAGGCATCATaGGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACT +
Preference number: 1 (lower is better)
Translates to: GNSVSVLIIHTRKAS*AMPINRLLSVLRQT
Trigger: AGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATCAAAACTGATACTGAGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 90 bp TGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATaGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTT +
Preference number: 1 (lower is better)
Translates to: CQSTGSSLFSGKLPV*TTLGSSKPNEMFLL
Trigger: AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATaGAAGCCTGGCTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTA +
Preference number: 1 (lower is better)
Translates to: SAGRDFRDNDQGIVR*KPGSFLEVHNFLEV
Trigger: TACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAGCCAGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 90 bp TTTTTCTGTTCTTACCTTGCCGTAGTTCACCTATCCAGAAATGGATaGTCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGCA +
Preference number: 1 (lower is better)
Translates to: FFCSYLAVVHLSRNG*SAFSSYCECTLVKA
Trigger: TGCTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGGATAGGTGAACTACGGCAAGGTAAGAACAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 90 bp TTGGAGAGTATGCTGGTTAGATCATTGGTTTGTAACACCAACCAGTaGAAATTTCTCATGCTATCATATAATCAACTCTGTCCCACATTA +
Preference number: 1 (lower is better)
Translates to: LESMLVRSLVCNTNQ*KFLMLSYNQLCPTL
Trigger: TAATGTGGGACAGAGTTGATTATATGATAGCATGAGAAATTTGCACTGGTTGGTGTTACAAACCAATGATCTAACCAGCATACTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 90 bp TCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGCATGGTaGAAAGATAATATACATCAACACGTTACTTCTGGTAAAGAGCTC +
Preference number: 1 (lower is better)
Translates to: SAFSSYCECTLVKAW*KDNIHQHVTSGKEL
Trigger: GAGCTCTTTACCAGAAGTAACGTGTTGATGTATATTATCTTTCCACCATGCTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTaGTCAAAGCATGGTGGAAAGATAATATACATCAACACGTTACTT +
Preference number: 1 (lower is better)
Translates to: PEMDDLLSLVTVNVL*SKHGGKIIYINTLL
Trigger: AAGTAACGTGTTGATGTATATTATCTTTCCACCATGCTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCTGTTGCCCAGGCAGTaGCAGTGGAGTGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSLLPRQ*QWSAVA
Trigger: TGCCACTGCACTCCACTGCCACTGCCTGGGCAACAG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CAA 90 bp GGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCTAACTGCCTaGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: GITFASSGSRTFLTA*LRLTANVQHLLALL
Trigger: GAGAAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATCAGTCAAAACCGGGCTaGGCGGAAGCCGAGATATCT +
Preference number: 2 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYQSKPG*AEAEIS
Trigger: AGATATCTCGGCTTCCGCTCAGCCCGGTTTTGACTG...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCCATCAGAGGGTCCTTaGAATGCCTGTTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSPSEGP*NACSSS
Trigger: GGATGAAGAACAGGCATTGCAAGGACCCTCTGATGG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCTTGCTGCGGCTTACTaGCAACGTCCAACATCTTCT +
Preference number: 2 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSLAAAY*QRPTSS
Trigger: AGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCTGGGATTCCTTGTTATaGGAGATATGCTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSWDSLL*EICSGL
Trigger: GAGTCCTGAGCATATCTCTCATAACAAGGAATCCCA...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGGGAGTCTTGCTCTGTTaGCCAGGCAGTGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKGVLLC*PGSGSG
Trigger: TCCACTGCCACTGCCTGGGCAACAGAGCAAGACTCC...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CAA 90 bp AGGGATTTTCCACAATCTTTCCCTCCAATTCCCACCATGCTGGTGTaGCTACAGGGCAATCAGGGAAGTGCAGGTAGGGACTTCAGAGAT +
Preference number: 2 (lower is better)
Translates to: RDFPQSFPPIPTMLV*LQGNQGSAGRDFRD
Trigger: ATCTCTGAAGTCCCTACCTGCACTTCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGATTGTGGAAAATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCAGTCAAAACCGGGCTaGGCGGAAGCCGAGATATCT +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKQSKPG*AEAEIS
Trigger: AGATATCTCGGCTTCCGCTCAGCCCGGTTTTGACTG...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGTGCAGTCTTTCCCTCTaGTTTGTGGTGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKCSLSL*FVVAQR
Trigger: CCTCTGTGCCACCACAAATCAGAGGGAAAGACTGCA...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATAAAGGTACTAGAGGTTaGGTTGGTCGAGGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYKGTRG*VGRGKD
Trigger: ATCCTTTCCTCGACCAACGCAACCTCTAGTACCTTT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTAGGGATCCTAGGGGCTaGGGCCCATTTTCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPRDPRG*GPFSFF
Trigger: AAAGAAGGAAAATGGGCCCCAGCCCCTAGGATCCCT...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTTCAGAACCTCTTCCATaGAATTCAGCCGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPSEPLP*NSAGGV
Trigger: CACACCACCGGCTGAATTTCATGGAAGAGGTTCTGA...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAAGTTGCACTTTTCCTaGAAGTGCGGCCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKKLHFS*KCGQCL
Trigger: AAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCCTGAGCTCGTGATCTaGCCACCTTGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDPELVI*PPWPPK
Trigger: TTTGGGAGGCCAAGGTGGGCAGATCACGAGCTCAGG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCAGGTTTTCTATGGGATaGCATGAAATCCAATGTTCA +
Preference number: 2 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSRFSMG*HEIQCS
Trigger: TGAACATTGGATTTCATGCCATCCCATAGAAAACCT...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCCTCTGATTTGTGGTaGCACAGAGGAAAGGGCATA +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKPSDLW*HRGKGI
Trigger: TATGCCCTTTCCTCTGTGCCACCACAAATCAGAGGG...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAATTCAGCCGGTGGTGTaGAGTGTGGGATTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: SEIALSSDSELVKVTLQGIQPVV*SVGFLV
Trigger: AACAAGGAATCCCACACTTCACACCACCGGCTGAAT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGATCAGAACCTCTTCCATaGAATTCAGCCGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SEIALSSDSELVKVTLQGSEPLP*NSAGGV
Trigger: CACACCACCGGCTGAATTTCATGGAAGAGGTTCTGA...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTATGCGGCCAGTGCCTTTaGGCTGGGTATGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVCGQCL*AGYEGK
Trigger: CTTTCCTTCATACCCAGCGCAAAGGCACTGGCCGCA...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATGCAAGTGCGGCCAGTaGCTTTGCGCTGGGTATGAA +
Preference number: 2 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLACKCGQ*LCAGYE
Trigger: TTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTACACTTTTCCTGCAAGTaGGGCCAGTGCCTTTGCGCT +
Preference number: 2 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVHFSCK*GQCLCA
Trigger: AGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTG...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAAAGTTGCACTTTTCCTaGAAGTGCGGCCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: SEIALSSDSELVKVTLQGKLHFS*KCGQCL
Trigger: AAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTCTGGTCTCGAACTCCTaGGCTCGTGATCTGCCCACC +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSLVSNS*ARDLPT
Trigger: GGTGGGCAGATCACGAGCTCAGGAGTTCGAGACCAG...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCAAAGGTACTAGAGGTTaGGTTGGTCGAGGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLKGTRG*VGRGKD
Trigger: ATCCTTTCCTCGACCAACGCAACCTCTAGTACCTTT...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAATGAAATTCAGCCGGTaGTGTGAAGTGTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: SEIALSSDSELVKVTLQGMKFSR*CEVWDS
Trigger: GGAATCCCACACTTCACACCACCGGCTGAATTTCAT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATGAGTTACGACAGGGATaGGTCAAGACTTGTAATACA +
Preference number: 2 (lower is better)
Translates to: MSHANQQAPLCSQANFLYELRQG*VKTCNT
Trigger: TGTATTACAAGTCTTGACCCATCCCTGTCGTAACTC...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATGTGCAAGTTGTCTCCTaGAAGAGGTATGTGGGACTG +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDVQVVS*KRYVGL
Trigger: CAGTCCCACATACCTCTTTCAGGAGACAACTTGCAC...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCAGAGGGTCCTTGCAATaGCTGTTCTTCATCCTGATA +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLRGSLQ*LFFILI
Trigger: TATCAGGATGAAGAACAGGCATTGCAAGGACCCTCT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATGCAAGTGCGGCCAGTaGCTTTGCGCTGGGTATGAA +
Preference number: 2 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRCKCGQ*LCAGYE
Trigger: TTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTAACGTAAGTTTCCCCTaGCTTCTTTTACTGTTATCA +
Preference number: 2 (lower is better)
Translates to: FLTALLRLTANVQHLLALNVSFP*LLLLLS
Trigger: TGATAACAGTAAAAGAAGGCAGGGGAAACTTACGTT...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATAAAAGGTCAAACTGGTaGAAGTTGTCTCCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: MSHANQQAPLCSQANFLYKRSNW*KLSPER
Trigger: TCTTTCAGGAGACAACTTGCACCAGTTTGACCTTTT...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATGACCATACATGTGGATaGATAATAAGGCATAGCTTC +
Preference number: 2 (lower is better)
Translates to: MSHANQQAPLCSQANFLYDHTCG*IIRHSF
Trigger: GAAGCTATGCCTTATTATGCATCCACATGTATGGTC...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCAACTGCTGGGAGAAATaGCTGCCAAGGTCTTTTGTA +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLNCWEK*LPRSFV
Trigger: TACAAAAGACCTTGGCAGCCATTTCTCCCAGCAGTT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAACAGTAACTTTTACTaGAGTTACGACAGGGATGGG +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKNSNFY*SYDRDG
Trigger: CCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTATTCAGCCGGTGGTGTaGAGTGTGGGATTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLIQPVV*SVGFLV
Trigger: AACAAGGAATCCCACACTTCACACCACCGGCTGAAT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCTCAGGCTTATTTGGATaGCTAAGGAACAAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLSGLFG*LRNKGK
Trigger: CTTCCCTTTGTTCCTTAGTCATCCAAATAAGCCTGA...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCTTTCTGTTCTTACCTTaGCGTAGTTCACCTATCCAG +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLFLFLP*RSSPIQ
Trigger: CTGGATAGGTGAACTACGGCAAGGTAAGAACAGAAA...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGATGAAATTCAGCCGGTaGTGTGAAGTGTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMMKFSR*CEVWDS
Trigger: GGAATCCCACACTTCACACCACCGGCTGAATTTCAT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGTGCTGGTTAGATCATTaGTTTGTAACACCAACCAGT +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKCWLDH*FVTPTS
Trigger: ACTGGTTGGTGTTACAAACCAATGATCTAACCAGCA...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTCATAAGCCTTATTTTTaGATAGACTATGCCAATCCG +
Preference number: 2 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPHKPYF*IDYANP
Trigger: CGGATTGGCATAGTCTATTCAAAAATAAGGCTTATG...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCTTTCTCTGTATGCTATaGAATCACCAATTACGCCAC +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLFLCML*NHQLRH
Trigger: GTGGCGTAATTGGTGATTTCATAGCATACAGAGAAA...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTAAGTTACTACTGAGGTaGATGGTGTTCTCCCACACC +
Preference number: 2 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLKLLLR*MVFSHT
Trigger: GGTGTGGGAGAACACCATTCACCTCAGTAGTAACTT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTGAATGTCTGTTAATCTaGTACCTGCATGACTCAATA +
Preference number: 2 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPECLLI*YLHDSI
Trigger: TATTGAGTCATGCAGGTATCAGATTAACAGACATTC...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACCATCAGAGGGTCCTTaGAATGCCTGTTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRPSEGP*NACSSS
Trigger: GGATGAAGAACAGGCATTGCAAGGACCCTCTGATGG...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCTCAGTAATAATTACTaGTGTTTCTTGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKLSNNY*CFLTDQ
Trigger: CTGGTCTGTCAAGAAACAGCAGTAATTATTACTGAG...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTGGCAGTGGAGTGCAGTaGCATGATCTAGTCTCACTG +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSGSGVQ*HDLVSL
Trigger: CAGTGAGACTAGATCATGCCACTGCACTCCACTGCC...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGGCCACTGCGCCCAGCTaGTGTTCATTTTTAAGAATT +
Preference number: 2 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKATAPS*CSFLRI
Trigger: AATTCTTAAAAATGAACATCAGCTGGGCGCAGTGGC...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTCCACACCTTTGCTTCTaGCGGAAGTTAAGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSPHLCF*RKLSSL
Trigger: CAAGCTGCTTAACTTCCGTCAGAAGCAAAGGTGTGG...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGCGAATGGTAATAGCTaGCCTTCCACTTATTTGTTC +
Preference number: 2 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVANGNS*PSTYLF
Trigger: GAACAAATAAGTGGAAGGGCAGCTATTACCATTCGC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTTGTATTTGGTTAGGTTaGTGCTCCTTTAAAATGAGT +
Preference number: 2 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPCIWLG*CSFKMS
Trigger: ACTCATTTTAAAGGAGCAGCAACCTAACCAAATACA...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATCTCCTGTTTTCGGCTaGAAAGGTACTAGAGGTTGC +
Preference number: 2 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRSPVFG*KGTRGC
Trigger: GCAACCTCTAGTACCTTTCCAGCCGAAAACAGGAGA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAAAGGGAACACATTTTaGAAGCTAGTCAGAATAAAG +
Preference number: 2 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKKGNTF*KLVRIK
Trigger: CTTTATTCTGACTAGCTTCCAAAATGTGTTCCCTTT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATGAGAGTTTCAGTGTATaGGAGCCTCCAATCAAATTG +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDESFSV*EPPIKL
Trigger: CAATTTGATTGGAGGCTCCCATACACTGAAACTCTC...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAAGAAAAGAAACACAGTaGGCTTGTTTGGAGTCCATA +
Preference number: 2 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLARKETQ*ACLESI
Trigger: TATGGACTCCAAACAAGCTCACTGTGTTTCTTTTCT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTTCTCCTGTTTTCGGCTaGAAAGGTACTAGAGGTTGC +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSSPVFG*KGTRGC
Trigger: GCAACCTCTAGTACCTTTCCAGCCGAAAACAGGAGA...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGTTAAGGTTGAAATATaGGCCAGTGTATTCCACATC +
Preference number: 2 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMVKVEI*ASVFHI
Trigger: GATGTGGAATACACTGGCCCATATTTCAACCTTAAC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCAAAACAGGTTTTCTATaGGATGGCATGAAATCCAAT +
Preference number: 2 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLKTGFL*DGMKSN
Trigger: ATTGGATTTCATGCCATCCCATAGAAAACCTGTTTT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGAGAAAAGAAACACAGTaGGCTTGTTTGGAGTCCATA +
Preference number: 2 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKRKETQ*ACLESI
Trigger: TATGGACTCCAAACAAGCTCACTGTGTTTCTTTTCT...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAACGTAAGTTTCCCCTaGCTTCTTTTACTGTTATCA +
Preference number: 2 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMNVSFP*LLLLLS
Trigger: TGATAACAGTAAAAGAAGGCAGGGGAAACTTACGTT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTGCTGGGAGAAATGGCTaGCAAGGTCTTTTGTATCAA +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSAGRNG*QGLLYQ
Trigger: TTGATACAAAAGACCTTGGCAGCCATTTCTCCCAGC...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTATAGGCACTCATTTGTaGATAGACAGTAAACCACTC +
Preference number: 2 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLIGTHL*IDSKPL
Trigger: GAGTGGTTTACTGTCTATGCACAAATGAGTGCCTAT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCTTCTTGCTCTTCTCTaGTATCTCCAAAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDLLALL*YLQSYF
Trigger: GAAATAACTTTGGAGATAGCAGAGAAGAGCAAGAAG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATGTTTTCAGGCTTATTTaGATGACTAAGGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDVFRLI*MTKEQR
Trigger: CCTTTGTTCCTTAGTCATCCAAATAAGCCTGAAAAC...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGTGTTATCACCTTCATTaGACAGGAGTTATATCATTC +
Preference number: 2 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMCYHLH*TGVISF
Trigger: GAATGATATAACTCCTGTGCAATGAAGGTGATAACA...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAAAAGGTCAAACTGGTaGAAGTTGTCTCCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRKRSNW*KLSPER
Trigger: TCTTTCAGGAGACAACTTGCACCAGTTTGACCTTTT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR GCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCATATTTGGAGAGTATaGTGGTTAGATCATTGGTTT +
Preference number: 2 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDHIWRV*WLDHWF
Trigger: AAACCAATGATCTAACCAGCATACTCTCCAAATATG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAAGAAAAGGTCAAACTaGTGCAAGTTGTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRKKRSN*CKLSPE
Trigger: TTCAGGAGACAACTTGCACCAGTTTGACCTTTTCTT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTAATCAAATTGTAAGGTaGACACAACATTCGCAACTG +
Preference number: 2 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLNQIVR*TQHSQL
Trigger: CAGTTGCGAATGTTGTGTCCACCTTACAATTTGATT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CAA 90 bp GGAAGAACTAAGGTAATATGGTGGAAGTTTAGTCAAGTAACTGGTTaGAAGGTATACGAGACTGTGTACTTAGTAGATATACTGAATCCA +
Preference number: 2 (lower is better)
Translates to: GRTKVIWWKFSQVTG*KVYETVYLVDILNP
Trigger: TGGATTCAGTATATCTACTAAGTACACAGTCTCGTATACCTTCAAACCAGTTACTTGACTAAACTTCCACCATATTACCTTAGTTCTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTATTACTGCTGTTTCTTaGCAGACCAGTGATATTTCC +
Preference number: 2 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSITAVS*QTSDIS
Trigger: GGAAATATCACTGGTCTGTCAAGAAACAGCAGTAAT...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 72 bp CACCTTCGCGTCATCAGGCTCACGTACTTTCCTAACTaGCTTGCTGCGGCTTACTGCCAACGTCCAACATCT +
Preference number: 3 (lower is better)
Translates to: HLRVIRLTYFPN*LAAAYCQRPTS
Trigger: AGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAGCCTGATGACGCGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 72 bp AAACCAATGTCCGGTTTCAACCAGTCAAAACCGGGCTaGGCGGAAGCCGAGATATCTCAGTACCGTCCCATC +
Preference number: 3 (lower is better)
Translates to: KPMSGFNQSKPG*AEAEISQYRPI
Trigger: GATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGACTGGTTGAAACCGGACATTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR GCA 72 bp GGGATTTTCCACAATCTTTCCCTCCAATTCCCACCATaGTGGTGTTGCTACAGGGCAATCAGGGAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: GIFHNLSLQFPP*WCCYRAIREVQ
Trigger: CTGCACTTCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGATTGTGGAAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTCGGAAGTTAAGCAGCTaGCCTAAGGAGCCTAATGGT +
Preference number: 3 (lower is better)
Translates to: FLTALLRLTANVQHLLALRKLSS*PKEPNG
Trigger: ACCATTAGGCTCCTTAGGCAAGCTGCTTAACTTCCG...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR GCA 72 bp CTCACGTACTTTCCTAACTGCCTTGCTGCGGCTTACTaGCAACGTCCAACATCTTCTTGCTCTTCTCTGCTA +
Preference number: 3 (lower is better)
Translates to: LTYFPNCLAAAY*QRPTSSCSSLL
Trigger: TAGCAGAGAAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 72 bp ACTGAGGTGAATGGTGTTCTCCCACACCTTTGCTTCTaGCGGAAGTTAAGCAGCTTGCCTAAGGAGCCTAAT +
Preference number: 3 (lower is better)
Translates to: TEVNGVLPHLCF*RKLSSLPKEPN
Trigger: ATTAGGCTCCTTAGGCAAGCTGCTTAACTTCCGTCAGAAGCAAAGGTGTGGGAGAACACCATTCACCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 72 bp ACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATaGACTACCTTAGGCTCTTCCAAACCTAATGAGATG +
Preference number: 3 (lower is better)
Translates to: TGSSLFSGKLPV*TTLGSSKPNEM
Trigger: CATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCGTACTAGAGGTTGCGTaGGTCGAGGAAAGGATTGTA +
Preference number: 3 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLVLEVA*VEERIV
Trigger: TACAATCCTTTCCTCGACCAACGCAACCTCTAGTAC...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTACCCATCAGAGGGTCCTaGCAATGCCTGTTCTTCATC +
Preference number: 3 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVPIRGS*QCLFFI
Trigger: GATGAAGAACAGGCATTGCAAGGACCCTCTGATGGG...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR GCA 72 bp ATATCTCAGTACCGTCCCATCAGAGGGTCCTTGCAATaGCTGTTCTTCATCCTGATAGGTATCTATGTCCTT +
Preference number: 3 (lower is better)
Translates to: ISQYRPIRGSLQ*LFFILIGIYVL
Trigger: AAGGACATAGATACCTATCAGGATGAAGAACAGGCATTGCAAGGACCCTCTGATGGGACGGTACTGAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR CCA 72 bp TCTAGAAGTACTGCAGTCTTTCCCTCTGATTTGTGGTaGCACAGAGGAAAGGGCATAGGAAGAACTAAGGTA +
Preference number: 3 (lower is better)
Translates to: SRSTAVFPSDLW*HRGKGIGRTKV
Trigger: TACCTTAGTTCTTCCTATGCCCTTTCCTCTGTGCCACCACAAATCAGAGGGAAAGACTGCAGTACTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAAGAAACACAGTGAGCTaGTTTGGAGTCCATAGGATC +
Preference number: 3 (lower is better)
Translates to: SEIALSSDSELVKVTLQGRNTVS*FGVHRI
Trigger: GATCCTATGGACTCCAAACAAGCTCACTGTGTTTCT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGATCAAACTGGTGCAAGTaGTCTCCTGAAAGAGGTATG +
Preference number: 3 (lower is better)
Translates to: SEIALSSDSELVKVTLQGSNWCK*SPERGM
Trigger: CATACCTCTTTCAGGAGACAACTTGCACCAGTTTGA...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTACTTTCCTAACTGCCTaGCTGCGGCTTACTGCCAAC +
Preference number: 3 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLTFLTA*LRLTAN
Trigger: GTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 72 bp TATCAGAACCTCTTCCATGAAATTCAGCCGGTGGTGTaGAGTGTGGGATTCCTTGTTATGAGAGATATGCTC +
Preference number: 3 (lower is better)
Translates to: YQNLFHEIQPVV*SVGFLVMRDML
Trigger: GAGCATATCTCTCATAACAAGGAATCCCACACTTCACACCACCGGCTGAATTTCATGGAAGAGGTTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR GCA 72 bp TTTTCTCCTGTTTTCGGCTGGAAAGGTACTAGAGGTTaGGTTGGTCGAGGAAAGGATTGTAGAGTAGGAAAA +
Preference number: 3 (lower is better)
Translates to: FSPVFGWKGTRG*VGRGKDCRVGK
Trigger: TTTTCCTACTCTACAATCCTTTCCTCGACCAACGCAACCTCTAGTACCTTTCCAGCCGAAAACAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGTACTAGAGGTTGCGTaGGTCGAGGAAAGGATTGTA +
Preference number: 3 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMVLEVA*VEERIV
Trigger: TACAATCCTTTCCTCGACCAACGCAACCTCTAGTAC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATTGTTCTCCCACACCTTaGCTTCTGACGGAAGTTAAG +
Preference number: 3 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDCSPTP*LLTEVK
Trigger: CTTAACTTCCGTCAGAAGCAAAGGTGTGGGAGAACA...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTTACTGTGAATGTACTTaGGTCAAAGCATGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPYCECT*VKAWWK
Trigger: TTTCCACCATGCTTTGACCAAAGTACATTCACAGTA...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCATGCTGGTTAGATCATaGGTTTGTAACACCAACCAG +
Preference number: 3 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLMLVRS*VCNTNQ
Trigger: CTGGTTGGTGTTACAAACCAATGATCTAACCAGCAT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 72 bp AGAAAAGAAAAGGTCAAACTGGTGCAAGTTGTCTCCTaGAAGAGGTATGTGGGACTGACCCTCATAAATGTC +
Preference number: 3 (lower is better)
Translates to: RKEKVKLVQVVS*KRYVGLTLINV
Trigger: GACATTTATGAGGGTCAGTCCCACATACCTCTTTCAGGAGACAACTTGCACCAGTTTGACCTTTTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR CCA 72 bp AGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATaGAAGCCTGGCTCTTTCTTAGAAGTCCACAACTTT +
Preference number: 3 (lower is better)
Translates to: RDFRDNDQGIVR*KPGSFLEVHNF
Trigger: AAAGTTGTGGACTTCTAAGAAAGAGCCAGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAAGAAACACAGTGAGCTaGTTTGGAGTCCATAGGATC +
Preference number: 3 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVRNTVS*FGVHRI
Trigger: GATCCTATGGACTCCAAACAAGCTCACTGTGTTTCT...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTACGTCCAACATCTTCTaGCTCTTCTCTGCTATCTCC +
Preference number: 3 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLTSNIF*LFSAIS
Trigger: GGAGATAGCAGAGAAGAGCAAGAAGATGTTGGACGT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCAAACAATAGGTTATTaGATTGTCCTCCTTAGGTTG +
Preference number: 3 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKQTIGY*IVLLRL
Trigger: CAACCTAAGGAGGACAATCAAATAACCTATTGTTTG...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR TCA 72 bp AAGGAGACAGCTAATAGCATAGTCACAGATACAACATaGGTCCAAGCAAGCATCAATTCTTCGACATCACCT +
Preference number: 3 (lower is better)
Translates to: KETANSIVTDTT*VQASINSSTSP
Trigger: AGGTGATGTCGAAGAATTGATGCTTGCTTGGACTCATGTTGTATCTGTGACTATGCTATTAGCTGTCTCCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CCA 72 bp TTTCAGTGTATGGGAGCCTCCAATCAAATTGTAAGGTaGACACAACATTCGCAACTGCTAGGGCATATAAAA +
Preference number: 3 (lower is better)
Translates to: FQCMGASNQIVR*TQHSQLLGHIK
Trigger: TTTTATATGCCCTAGCAGTTGCGAATGTTGTGTCCACCTTACAATTTGATTGGAGGCTCCCATACACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTACTTCAGCTGTTAAGGTaGAAATATGGGCCAGTGTAT +
Preference number: 3 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVLQLLR*KYGPVY
Trigger: ATACACTGGCCCATATTTCAACCTTAACAGCTGAAG...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCTTCAGCTGTTAAGGTaGAAATATGGGCCAGTGTAT +
Preference number: 3 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMLQLLR*KYGPVY
Trigger: ATACACTGGCCCATATTTCAACCTTAACAGCTGAAG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAGGTACTGCTTTAAGTaGCACTTTTCCTGCAAGTGC +
Preference number: 3 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRYCFK*HFSCKC
Trigger: GCACTTGCAGGAAAAGTGCAACTTAAAGCAGTACCT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR TCA 72 bp TCTTACCTTGCCGTAGTTCACCTATCCAGAAATGGATaGTCTGCTTTCTCTAGTTACTGTGAATGTACTTTG +
Preference number: 3 (lower is better)
Translates to: SYLAVVHLSRNG*SAFSSYCECTL
Trigger: CAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGGATAGGTGAACTACGGCAAGGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR-3UTR CAA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTACTGCTGGTATTGACTTaGAAATTTTCATTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVLLVLT*KFSFGS
Trigger: AGACCCAAATGAAAATTTCAAAGTCAATACCAGCAG...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR-3UTR CAA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTGTTGCACATGGGTTTTaGACTACTTTCCAATCTTAC +
Preference number: 3 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLVAHGF*TTFQSY
Trigger: GTAAGATTGGAAAGTAGTCAAAAACCCATGTGCAAC...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGTCCTCCACTCGGGAGTaGTGTGCGCGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRSSTRE*CARRGA
Trigger: AGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGA...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCTGGTCTCGAACTCCTaGGCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSLVSNS*ARDLPT
Trigger: GGTGGGCAGATCACGAGCTCAGGAGTTCGAGACCAG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTCCTCCACTCGGGAGTaGTGTGCGCGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKSSTRE*CARRGA
Trigger: AGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGACAGGCTGTTCAGCTaGTCCGCCAGCCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRDRLFS*SASQKS
Trigger: TGATTTCTGGCTGGCGGATCAGCTGAACAGCCTGTC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCACTTTTCCTGCAAGTaGGGCCAGTGCCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSHFSCK*GQCLCA
Trigger: AGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCTATCGGCGCAGGCACTaGATGAAGCGAAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSYRRRH*MKRSQA
Trigger: TGCTTGGCTTCGCTTCATCCAGTGCCTGCGCCGATA...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGTTGACCAACACAGTGTaGTGGAGGGAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRLTNTV*WRERGE
Trigger: TTCACCCCTCTCCCTCCACCACACTGTGTTGGTCAA...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCCACTCGGGAGTGATGTaGGCGGAGAGGTGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLHSGVM*AERCSA
Trigger: CGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTG...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR CAA 72 bp CCACAATCTTTCCCTCCAATTCCCACCATGCTGGTGTaGCTACAGGGCAATCAGGGAAGTGCAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: PQSFPPIPTMLV*LQGNQGSAGRD
Trigger: GTCCCTACCTGCACTTCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGATTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCGGGGCCACCTCTACGTaGGCCACTCGCCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLGATST*ATRQSA
Trigger: AGCAGATTGGCGAGTGGCTCACGTAGAGGTGGCCCC...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTGCGGCCAGTGCCTTTaGGCTGGGTATGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKCGQCL*AGYEGK
Trigger: CTTTCCTTCATACCCAGCGCAAAGGCACTGGCCGCA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTGCAAGTGCGGCCAGTaGCTTTGCGCTGGGTATGAA +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKCKCGQ*LCAGYE
Trigger: TTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGCTTGCATGTATAAAATaGGGCCACCTCTACGTGAGC +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRLACIK*GHLYVS
Trigger: GCTCACGTAGAGGTGGCCCCATTTTATACATGCAAG...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGGGGATGACACTAATTaGAGCAAAGAAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRGDDTN*SKEACQ
Trigger: CTGGCATGCTTCTTTGCTCCAATTAGTGTCATCCCC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGATCACGAGCCTTGGATTaGGAAGCGAGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGSRALD*EARRGR
Trigger: CCGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTGA...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAGCCACTCGCCAATCTaGTCCACGAGATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKSHSPI*STRCFQ
Trigger: CTGGAAACATCTCGTGGAGCAGATTGGCGAGTGGCT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTGCCGGCGCAGGGATATaGTCTGGTTGTACTTCCATG +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALAGAGI*SGCTSM
Trigger: CATGGAAGTACAACCAGAGCATATCCCTGCGCCGGC...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATACAGACGTGAGCCACTaGGCCCAGCTGATGTTCATT +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYTDVSH*AQLMFI
Trigger: AATGAACATCAGCTGGGCGCAGTGGCTCACGTCTGT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGGGACAAGTGGAAGACTaGCTTTCTGCGTTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKGQVED*LSALSQ
Trigger: CTGCGACAACGCAGAAAGCCAGTCTTCCACTTGTCC...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATAAAAGTAGTCCATGCTaGTGCAGGCTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYKSSPC*CRLSSS
Trigger: GGAGCTGCTCAGCCTGCACCAGCATGGACTACTTTT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGCAAAGCCTACCTTATaGAAGGGGGCTGTAAATACT +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRAKPTL*KGAVNT
Trigger: AGTATTTACAGCCCCCTTCCATAAGGTAGGCTTTGC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGAGGTAATCGAGATTTaGATAGTCCAAGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQREVIEI*IVQAKR
Trigger: GCGCTTTGCTTGGACTATCCAAATCTCGATTACCTC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTGAAGGTGCCTGGTCCTaGGCTGAATACAGCATATCC +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALEGAWS*AEYSIS
Trigger: GGATATGCTGTATTCAGCTCAGGACCAGGCACCTTC...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGCTGGTTGTACTTCCATaGCCGATTCTTCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKLVVLP*PILLAV
Trigger: AACCGCCAGAAGAATCGGTCATGGAAGTACAACCAG...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATCGTACCCCATCATCCTaGTCCATCATCTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYRTPSS*SIICSR
Trigger: CCTAGAACAGATGATGGACCAGGATGATGGGGTACG...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGAGTTACGACAGGGATaGGTCAAGACTTGTAATACA +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRELRQG*VKTCNT
Trigger: TGTATTACAAGTCTTGACCCATCCCTGTCGTAACTC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGAACAGTAACTTTTACTaGAGTTACGACAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRNSNFY*SYDRDG
Trigger: CCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTT...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATCCCTCTGATTTGTGGTaGCACAGAGGAAAGGGCATA +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYPSDLW*HRGKGI
Trigger: TATGCCCTTTCCTCTGTGCCACCACAAATCAGAGGG...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CAA 72 bp TTCGCGTCATCAGGCTCACGTACTTTCCTAACTGCCTaGCTGCGGCTTACTGCCAACGTCCAACATCTTCTT +
Preference number: 4 (lower is better)
Translates to: FASSGSRTFLTA*LRLTANVQHLL
Trigger: AAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGTGAGCCTGATGACGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGAATACAGCATATCCTTaGAAGCCTCATACTGGATGT +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRNTAYP*KPHTGC
Trigger: ACATCCAGTATGAGGCTTTCAAGGATATGCTGTATT...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGGGGCCACCTCTACGTaGGCCACTCGCCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVGATST*ATRQSA
Trigger: AGCAGATTGGCGAGTGGCTCACGTAGAGGTGGCCCC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTATTCAGCCGGTGGTGTaGAGTGTGGGATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALIQPVV*SVGFLV
Trigger: AACAAGGAATCCCACACTTCACACCACCGGCTGAAT...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAGTAGTCCATGCTGGTaGAGGCTGAGCAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKSSPCW*RLSSSQ
Trigger: TTGGGAGCTGCTCAGCCTGCACCAGCATGGACTACT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTAAGTTGCACTTTTCCTaGAAGTGCGGCCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALKLHFS*KCGQCL
Trigger: AAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTT...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGAAAAGGTCAAACTGGTaGAAGTTGTCTCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRKRSNW*KLSPER
Trigger: TCTTTCAGGAGACAACTTGCACCAGTTTGACCTTTT...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATCCGGAAAACCTCAAGTaGGGCAAAGACAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYPENLK*GKDSSN
Trigger: ATTGCTACTGTCTTTGCCCCACTTGAGGTTTTCCGG...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATGGCAGTGGAGTGCAGTaGCATGATCTAGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: MSHANQQAPLCSQANFLYGSGVQ*HDLVSL
Trigger: CAGTGAGACTAGATCATGCCACTGCACTCCACTGCC...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTACCAACACAGTGTGGTaGAGGGAGAGGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPTNTVW*RERGEG
Trigger: TCCTTCACCCCTCTCCCTCCACCACACTGTGTTGGT...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATGGCGCAGGCACTGGATaGAGCGAAGCCAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDGAGTG*SEAKQE
Trigger: TTCCTGCTTGGCTTCGCTTCATCCAGTGCCTGCGCC...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCTTCTTGACAGACCAGTaGTATTTCCCCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSFLTDQ*YFPHSF
Trigger: AAAACTATGGGGGAAATATCACTGGTCTGTCAAGAA...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCTGGAGCAAAGAAGCATaGCAGAAGGCTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLWSKEA*QKAQAP
Trigger: TGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCA...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATCTTGCTGCGGCTTACTaGCAACGTCCAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: MSHANQQAPLCSQANFLYLAAAY*QRPTSS
Trigger: AGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAG...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTTCTCCTGTTTTCGGCTaGAAAGGTACTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALSPVFG*KGTRGC
Trigger: GCAACCTCTAGTACCTTTCCAGCCGAAAACAGGAGA...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGTTTTCAGGCTTATTTaGATGACTAAGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRVFRLI*MTKEQR
Trigger: CCTTTGTTCCTTAGTCATCCAAATAAGCCTGAAAAC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCTGTTGCCCAGGCAGTaGCAGTGGAGTGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDLLPRQ*QWSAVA
Trigger: TGCCACTGCACTCCACTGCCACTGCCTGGGCAACAG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATCAAGGGATAGTGAGATaGAAGCCTGGCTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYQGIVR*KPGSFL
Trigger: TAAGAAAGAGCCAGGCTTCCATCTCACTATCCCTTG...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAGAAGGTGCCTGGTCCTaGGCTGAATACAGCATATCC +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGEGAWS*AEYSIS
Trigger: GGATATGCTGTATTCAGCTCAGGACCAGGCACCTTC...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGTAGCAAACCTGCGCTaGGCCTCTGCGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMVANLR*ASASFS
Trigger: AGAGAAGCTCGCAGAGGCTCAGCGCAGGTTTGCTAC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAGTAGCAAACCTGCGCTaGGCCTCTGCGAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAVANLR*ASASFS
Trigger: AGAGAAGCTCGCAGAGGCTCAGCGCAGGTTTGCTAC...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCTCAGAACCTCTTCCATaGAATTCAGCCGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLSEPLP*NSAGGV
Trigger: CACACCACCGGCTGAATTTCATGGAAGAGGTTCTGA...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTCAGGCTTATTTGGATaGCTAAGGAACAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYSGLFG*LRNKGK
Trigger: CTTCCCTTTGTTCCTTAGTCATCCAAATAAGCCTGA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCGAATGTCTGTTAATCTaGTACCTGCATGACTCAATA +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSECLLI*YLHDSI
Trigger: TATTGAGTCATGCAGGTATCAGATTAACAGACATTC...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCTGCAGTCTTTCCCTCTaGTTTGTGGTGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLCSLSL*FVVAQR
Trigger: CCTCTGTGCCACCACAAATCAGAGGGAAAGACTGCA...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTCGGCGAACTTCATCCTaGCGTTTCCCCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLRRTSS*RFPLTP
Trigger: GGGAGTGAGGGGGAAACGGCAGGATGAAGTTCGCCG...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGATGTGCGCGGAGAGGTaGTCGGCGAACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMMCAER*SANFIL
Trigger: CAGGATGAAGTTCGCCGAGCACCTCTCCGCGCACAT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCCCATCAGAGGGTCCTTaGAATGCCTGTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLPSEGP*NACSSS
Trigger: GGATGAAGAACAGGCATTGCAAGGACCCTCTGATGG...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGGAGTCTTGCTCTGTTaGCCAGGCAGTGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVGVLLC*PGSGSG
Trigger: TCCACTGCCACTGCCTGGGCAACAGAGCAAGACTCC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTTGAAAGCCTCATACTaGATGTATTGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYLKASY*MYCFLH
Trigger: GTGGAGGAAGCAATACATCCAGTATGAGGCTTTCAA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGAAAGGGAACACATTTTaGAAGCTAGTCAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRKGNTF*KLVRIK
Trigger: CTTTATTCTGACTAGCTTCCAAAATGTGTTCCCTTT...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAAGGGATCCTAGGGGCTaGGGCCCATTTTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGRDPRG*GPFSFF
Trigger: AAAGAAGGAAAATGGGCCCCAGCCCCTAGGATCCCT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGACAGGCTGTTCAGCTaGTCCGCCAGCCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMDRLFS*SASQKS
Trigger: TGATTTCTGGCTGGCGGATCAGCTGAACAGCCTGTC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTTACTTTCATCCCATTTaGGCTCCAAACTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALYFHPI*APNCRS
Trigger: GCTTCTACAGTTTGGAGCTCAAATGGGATGAAAGTA...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTACAAGCAGGAATGCACTaGACAATGGCCCGCACACCA +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVQAGMH*TMARTP
Trigger: TGGTGTGCGGGCCATTGTTCAGTGCATTCCTGCTTG...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGACTGGTTGTACTTCCATaGCCGATTCTTCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGLVVLP*PILLAV
Trigger: AACCGCCAGAAGAATCGGTCATGGAAGTACAACCAG...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTTCACGAGCCTTGGATTaGGAAGCGAGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSSRALD*EARRGR
Trigger: CCGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTGA...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCAGTCAAAACCGGGCTaGGCGGAAGCCGAGATATCT +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMQSKPG*AEAEIS
Trigger: AGATATCTCGGCTTCCGCTCAGCCCGGTTTTGACTG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCGTGCAAGTTGTCTCCTaGAAGAGGTATGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLVQVVS*KRYVGL
Trigger: CAGTCCCACATACCTCTTTCAGGAGACAACTTGCAC...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATTGGGATTCCTTGTTATaGGAGATATGCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: MSHANQQAPLCSQANFLYWDSLL*EICSGL
Trigger: GAGTCCTGAGCATATCTCTCATAACAAGGAATCCCA...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTGTCACAGATACAACATaGGTCCAAGCAAGCATCAAT +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALVTDTT*VQASIN
Trigger: ATTGATGCTTGCTTGGACTCATGTTGTATCTGTGAC...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACGGCGAACTTCATCCTaGCGTTTCCCCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRRTSS*RFPLTP
Trigger: GGGAGTGAGGGGGAAACGGCAGGATGAAGTTCGCCG...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGATGTGCGCGGAGAGGTaGTCGGCGAACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKMCAER*SANFIL
Trigger: CAGGATGAAGTTCGCCGAGCACCTCTCCGCGCACAT...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAAGTAGTCCATGCTGGTaGAGGCTGAGCAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLASSPCW*RLSSSQ
Trigger: TTGGGAGCTGCTCAGCCTGCACCAGCATGGACTACT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGCCGGCGCAGGGATATaGTCTGGTTGTACTTCCATG +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMAGAGI*SGCTSM
Trigger: CATGGAAGTACAACCAGAGCATATCCCTGCGCCGGC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCACGTACTTTCCTAACTaGCTTGCTGCGGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLTYFPN*LAAAYC
Trigger: GCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGTACGT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCATATTTGGAGAGTATaGTGGTTAGATCATTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSHIWRV*WLDHWF
Trigger: AAACCAATGATCTAACCAGCATACTCTCCAAATATG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAAGAAAAGGTCAAACTaGTGCAAGTTGTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKKKRSN*CKLSPE
Trigger: TTCAGGAGACAACTTGCACCAGTTTGACCTTTTCTT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGCTCTGCGAGCTTCTCTaGATAAAATGTGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKLCELL*IKCVDF
Trigger: AAAATCAACACATTTTATTCAGAGAAGCTCGCAGAG...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTATGTTCTAGGAGAGTCTaGTCATCTGCGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVCSRRV*SSAFRG
Trigger: CCCCCTGAACGCAGATGATCAGACTCTCCTAGAACA...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTCAGTCAAAACCGGGCTaGGCGGAAGCCGAGATATCT +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLQSKPG*AEAEIS
Trigger: AGATATCTCGGCTTCCGCTCAGCCCGGTTTTGACTG...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGCATAAGCCTTATTTTTaGATAGACTATGCCAATCCG +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKHKPYF*IDYANP
Trigger: CGGATTGGCATAGTCTATTCAAAAATAAGGCTTATG...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTGTCACATAGCAAGCTaGAAGTTACATAAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYCHIAS*KLHKPY
Trigger: ATAAGGCTTATGTAACTTTCAGCTTGCTATGTGACA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTCCAGGATCTTGTCATaGTTTTTCAGGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYSRILS*FFRIFR
Trigger: TCGAAAAATCCTGAAAAAGCATGACAAGATCCTGGA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGTGGAGCAAAGAAGCATaGCAGAAGGCTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMWSKEA*QKAQAP
Trigger: TGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCA...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAACGTAAGTTTCCCCTaGCTTCTTTTACTGTTATCA +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKNVSFP*LLLLLS
Trigger: TGATAACAGTAAAAGAAGGCAGGGGAAACTTACGTT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACTCCAATTCCCACCATaGTGGTGTTGCTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLALQFPP*WCCYRA
Trigger: TGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAAAAGTAGTCCATGCTaGTGCAGGCTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMKSSPC*CRLSSS
Trigger: GGAGCTGCTCAGCCTGCACCAGCATGGACTACTTTT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCAACTGCTGGGAGAAATaGCTGCCAAGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLNCWEK*LPRSFV
Trigger: TACAAAAGACCTTGGCAGCCATTTCTCCCAGCAGTT...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAACTGCTGGGAGAAATaGCTGCCAAGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKNCWEK*LPRSFV
Trigger: TACAAAAGACCTTGGCAGCCATTTCTCCCAGCAGTT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAGTGAGATGGAAGCCTaGCTCTTTCTTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKSEMEA*LFLRSP
Trigger: TGGACTTCTAAGAAAGAGCCAGGCTTCCATCTCACT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGATCCAACCATACGTGTTaGTGCCCAGTAGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGSNHTC*CPVEKG
Trigger: TCCTTTTTCTACTGGGCATCAACACGTATGGTTGGA...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTTGTTCTAGGAGAGTCTaGTCATCTGCGTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLCSRRV*SSAFRG
Trigger: CCCCCTGAACGCAGATGATCAGACTCTCCTAGAACA...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGTGCAAGTTGTCTCCTaGAAGAGGTATGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVVQVVS*KRYVGL
Trigger: CAGTCCCACATACCTCTTTCAGGAGACAACTTGCAC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAATTCAGCCGGTGGTGTaGAGTGTGGGATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAIQPVV*SVGFLV
Trigger: AACAAGGAATCCCACACTTCACACCACCGGCTGAAT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGTCAGAACCTCTTCCATaGAATTCAGCCGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMSEPLP*NSAGGV
Trigger: CACACCACCGGCTGAATTTCATGGAAGAGGTTCTGA...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGTCTAAAAGTAGTCCATaGTGGTGCAGGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMSKSSP*WCRLSS
Trigger: GCTGCTCAGCCTGCACCAGCATGGACTACTTTTAGA...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGGAAGCCAAGCAGGAATaGACTGAACAATGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKEAKQE*TEQWPA
Trigger: TGCGGGCCATTGTTCAGTGCATTCCTGCTTGGCTTC...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCAAAGGTACTAGAGGTTaGGTTGGTCGAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLKGTRG*VGRGKD
Trigger: ATCCTTTCCTCGACCAACGCAACCTCTAGTACCTTT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCCATCAGAGGGTCCTTaGAATGCCTGTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMPSEGP*NACSSS
Trigger: GGATGAAGAACAGGCATTGCAAGGACCCTCTGATGG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACACTTTTCCTGCAAGTaGGGCCAGTGCCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRHFSCK*GQCLCA
Trigger: AGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTG...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAAGTTGCACTTTTCCTaGAAGTGCGGCCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMKLHFS*KCGQCL
Trigger: AAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAGCTGGGAGAAATGGCTaGCAAGGTCTTTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGAGRNG*QGLLYQ
Trigger: TTGATACAAAAGACCTTGGCAGCCATTTCTCCCAGC...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCGCGAATGGTAATAGCTaGCCTTCCACTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLANGNS*PSTYLF
Trigger: GAACAAATAAGTGGAAGGGCAGCTATTACCATTCGC...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTTTTTGAATAGACTATaGCAATCCGACAAACACTTC +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKFLNRL*QSDKHF
Trigger: GAAGTGTTTGTCGGATTGGCATAGTCTATTCAAAAA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTCTTTACCTAACTTTTaGAGAAGTTCTACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKSLPNF*RSSTKA
Trigger: AGCTTTGGTAGAACTTCTGCAAAAGTTAGGTAAAGA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTTCAAAGATGAGTACATaGTTTACTCCAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPSKMST*FTPACL
Trigger: GAGACAGGCTGGAGTAAACCATGTACTCATCTTTGA...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACATGACCGATTCTTCTaGCGGTTTCGTACCCCATCA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAHDRFF*RFRTPS
Trigger: TGATGGGGTACGAAACCGCCAGAAGAATCGGTCATG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACGCAGGGATATGCTCTaGTTGTACTTCCATGACCGA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLARRDML*LYFHDR
Trigger: TCGGTCATGGAAGTACAACCAGAGCATATCCCTGCG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAAATTCTGGCTAAAGTaGTTGAACCCAGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LSCTFPASAASAFALGMKKFWLK*LNPEEK
Trigger: TTTTTCTTCTGGGTTCAACCACTTTAGCCAGAATTT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATAAATTCTGGCTAAAGTaGTTGAACCCAGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYKFWLK*LNPEEK
Trigger: TTTTTCTTCTGGGTTCAACCACTTTAGCCAGAATTT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCGAGAGTTTCAGTGTATaGGAGCCTCCAATCAAATTG +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLESFSV*EPPIKL
Trigger: CAATTTGATTGGAGGCTCCCATACACTGAAACTCTC...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTTCAATTGTCTTCACCTaGTCACTAGAGACCGTATCT +
Preference number: 4 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPSIVFT*SLETVS
Trigger: AGATACGGTCTCTAGTGACCAGGTGAAGACAATTGA...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATGCCTGGTCCTGAGCTaGATACAGCATATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLACLVLS*IQHILE
Trigger: TTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTAGAAAAGAAACACAGTaGGCTTGTTTGGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPRKETQ*ACLESI
Trigger: TATGGACTCCAAACAAGCTCACTGTGTTTCTTTTCT...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGCCACACCTTTGCTTCTaGCGGAAGTTAAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKPHLCF*RKLSSL
Trigger: CAAGCTGCTTAACTTCCGTCAGAAGCAAAGGTGTGG...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAAAGTTACTACTGAGGTaGATGGTGTTCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAKLLLR*MVFSHT
Trigger: GGTGTGGGAGAACACCATTCACCTCAGTAGTAACTT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGTGACCTCGTTCTTCTaGATTATTTGGCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMVTSFF*IIWQQA
Trigger: GGCCTGTTGCCAAATAATTCAGAAGAACGAGGTCAC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367589.3
CDS-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATCATACTGGATGTATTaGTTCCTCCACTCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLASYWMY*FLHSGV
Trigger: CACTCCCGAGTGGAGGAAGCAATACATCCAGTATGA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCGCGAATGGTAATAGCTaGCCTTCCACTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLANGNS*PSTYLF
Trigger: GAACAAATAAGTGGAAGGGCAGCTATTACCATTCGC...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGAGGCATCATGAGCCATaGCAATCAACAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKRHHEP*QSTGSS
Trigger: AGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCT...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTACTTCTCTTCAAACTTaGCAAAATACCTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: FLTALLRLTANVQHLLALTSLQT*QNTSLL
Trigger: CAGTAAAGAGGTATTTTGCCAAGTTTGAAGAGAAGT...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGTCCTCATGGGACAAGTaGAAGACTGGCTTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKSSWDK*KTGFLR
Trigger: ACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGA...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCCGGAAAACCTCAAGTaGGGCAAAGACAGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMPENLK*GKDSSN
Trigger: ATTGCTACTGTCTTTGCCCCACTTGAGGTTTTCCGG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAATGAAATTCAGCCGGTaGTGTGAAGTGTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAMKFSR*CEVWDS
Trigger: GGAATCCCACACTTCACACCACCGGCTGAATTTCAT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCTGCTGGTTAGATCATTaGTTTGTAACACCAACCAGT +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLCWLDH*FVTPTS
Trigger: ACTGGTTGGTGTTACAAACCAATGATCTAACCAGCA...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAATGATGTCCCCAGAATaGGGCAACAAAGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAMMSPE*GNKVVE
Trigger: CTCTACAACTTTGTTGCCTCATTCTGGGGACATCAT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCTTCTATGGGATGGCATaGAATCCAATGTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLFYGMA*NPMFIL
Trigger: AAGGATGAACATTGGATTTCATGCCATCCCATAGAA...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAACCATAGTGTCCGAGTaGCCTCGTTCTTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVTIVSE*PRSSEL
Trigger: TAATTCAGAAGAACGAGGTCACTCGGACACTATGGT...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367589.3
CDS-3UTR GCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTAGCCACTCGCCAATCTaGTCCACGAGATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSSHSPI*STRCFQ
Trigger: CTGGAAACATCTCGTGGAGCAGATTGGCGAGTGGCT...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGCTGGGAGAAATGGCTaGCAAGGTCTTTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMAGRNG*QGLLYQ
Trigger: TTGATACAAAAGACCTTGGCAGCCATTTCTCCCAGC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAATAGGCACTCATTTGTaGATAGACAGTAAACCACTC +
Preference number: 4 (lower is better)
Translates to: SEIALSSDSELVKVTLQGIGTHL*IDSKPL
Trigger: GAGTGGTTTACTGTCTATGCACAAATGAGTGCCTAT...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATCCTCATGGGACAAGTaGAAGACTGGCTTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRSSWDK*KTGFLR
Trigger: ACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTCTTGCATGTATAAAATaGGGCCACCTCTACGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLLACIK*GHLYVS
Trigger: GCTCACGTAGAGGTGGCCCCATTTTATACATGCAAG...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTGGGGATGACACTAATTaGAGCAAAGAAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLGDDTN*SKEACQ
Trigger: CTGGCATGCTTCTTTGCTCCAATTAGTGTCATCCCC...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGCAAAGCCTACCTTATaGAAGGGGGCTGTAAATACT +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVAKPTL*KGAVNT
Trigger: AGTATTTACAGCCCCCTTCCATAAGGTAGGCTTTGC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAGAATGCACTGAACAATaGCCCGCACACCATATGTAT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAECTEQ*PAHHMY
Trigger: ATACATATGGTGTGCGGGCCATTGTTCAGTGCATTC...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACGTACCCCATCATCCTaGTCCATCATCTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRTPSS*SIICSR
Trigger: CCTAGAACAGATGATGGACCAGGATGATGGGGTACG...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCAGGTTTTCTATGGGATaGCATGAAATCCAATGTTCA +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLRFSMG*HEIQCS
Trigger: TGAACATTGGATTTCATGCCATCCCATAGAAAACCT...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTGGCAAACTTCCTGTATaGACTACCTTAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLGKLPV*TTLGSS
Trigger: GGAAGAGCCTAAGGTAGTCCATACAGGAAGTTTGCC...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATACTTTCATCCCATTTaGGCTCCAAACTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAYFHPI*APNCRS
Trigger: GCTTCTACAGTTTGGAGCTCAAATGGGATGAAAGTA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACCAGCATTAACTAAATaGGGAAAGGCCCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAPALTK*GKALFV
Trigger: CACAAAAAGGGCCTTTCCTCATTTAGTTAATGCTGG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTATGATGTCCCCAGAATaGGGCAACAAAGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLMMSPE*GNKVVE
Trigger: CTCTACAACTTTGTTGCCTCATTCTGGGGACATCAT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTATTTCTGTTCTTACCTTaGCGTAGTTCACCTATCCAG +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVFLFLP*RSSPIQ
Trigger: CTGGATAGGTGAACTACGGCAAGGTAAGAACAGAAA...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp AGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGCCTAATTTTTGTGGTCACTaGTTAGAAAACTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SAGRDFRDNDQGIVRWKPNFCGH*LENCIW
Trigger: CCAAATGCAGTTTTCTAAGCAGTGACCACAAAAATT...AGGCTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATTTGAAAGCCTCATACTaGATGTATTGCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDLKASY*MYCFLH
Trigger: GTGGAGGAAGCAATACATCCAGTATGAGGCTTTCAA...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATCAAAGATGAGTACATaGTTTACTCCAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLASKMST*FTPACL
Trigger: GAGACAGGCTGGAGTAAACCATGTACTCATCTTTGA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTCATGACCGATTCTTCTaGCGGTTTCGTACCCCATCA +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSHDRFF*RFRTPS
Trigger: TGATGGGGTACGAAACCGCCAGAAGAATCGGTCATG...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTCGCAGGGATATGCTCTaGTTGTACTTCCATGACCGA +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSRRDML*LYFHDR
Trigger: TCGGTCATGGAAGTACAACCAGAGCATATCCCTGCG...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCAAAACAGGTTTTCTATaGGATGGCATGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLKTGFL*DGMKSN
Trigger: ATTGGATTTCATGCCATCCCATAGAAAACCTGTTTT...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGAGTTACGACAGGGATaGGTCAAGACTTGTAATACA +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMELRQG*VKTCNT
Trigger: TGTATTACAAGTCTTGACCCATCCCTGTCGTAACTC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAAACAGTAACTTTTACTaGAGTTACGACAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVNSNFY*SYDRDG
Trigger: CCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTT...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAATGAAGTTTGTATTTaGTTAGGTTGCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKNEVCI*LGCCSF
Trigger: AAAGGAGCAGCAACCTAACCAAATACAAACTTCATT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATAATACAGCATATCCTTaGAAGCCTCATACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDNTAYP*KPHTGC
Trigger: ACATCCAGTATGAGGCTTTCAAGGATATGCTGTATT...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATCCAACCATACGTGTTaGTGCCCAGTAGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRSNHTC*CPVEKG
Trigger: TCCTTTTTCTACTGGGCATCAACACGTATGGTTGGA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATGGGATTCCTTGTTATaGGAGATATGCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRWDSLL*EICSGL
Trigger: GAGTCCTGAGCATATCTCTCATAACAAGGAATCCCA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAGCCACTGCGCCCAGCTaGTGTTCATTTTTAAGAATT +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRATAPS*CSFLRI
Trigger: AATTCTTAAAAATGAACATCAGCTGGGCGCAGTGGC...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATTTCTCTGTATGCTATaGAATCACCAATTACGCCAC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAFLCML*NHQLRH
Trigger: GTGGCGTAATTGGTGATTTCATAGCATACAGAGAAA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACTATCCAGAAATGGATaGTCTGCTTTCTCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLALSRNG*SAFSSY
Trigger: GTAACTAGAGAAAGCAGATCATCCATTTCTGGATAG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTACAAGAAAGGCATCATaGGCCATGCCAATCAACAGG +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSTRKAS*AMPINR
Trigger: CCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGT...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAGAGGGTCCTTGCAATaGCTGTTCTTCATCCTGATA +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRGSLQ*LFFILI
Trigger: TATCAGGATGAAGAACAGGCATTGCAAGGACCCTCT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAAAAGGTCAAACTGGTaGAAGTTGTCTCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMKRSNW*KLSPER
Trigger: TCTTTCAGGAGACAACTTGCACCAGTTTGACCTTTT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCACATCTTCAAGTTCATTaGTCACTACAGCCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAHLQVH*SLQPQF
Trigger: AAACTGAGGCTGTAGTGACCAATGAACTTGAAGATG...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCATCTTCAAGTTCATTaGTCACTACAGCCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDHLQVH*SLQPQF
Trigger: AAACTGAGGCTGTAGTGACCAATGAACTTGAAGATG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATCACATCCTCTATTATaGCACAGTAGTAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLASHPLL*HSSSRL
Trigger: AAGCCTACTACTACTGTGCCATAATAGAGGATGTGA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGATTACTGCTGTTTCTTaGCAGACCAGTGATATTTCC +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKITAVS*QTSDIS
Trigger: GGAAATATCACTGGTCTGTCAAGAAACAGCAGTAAT...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATCCAGGATCTTGTCATaGTTTTTCAGGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLASRILS*FFRIFR
Trigger: TCGAAAAATCCTGAAAAAGCATGACAAGATCCTGGA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTAGAGGGTCCTTGCAATaGCTGTTCTTCATCCTGATA +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSRGSLQ*LFFILI
Trigger: TATCAGGATGAAGAACAGGCATTGCAAGGACCCTCT...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGGACCATACATGTGGATaGATAATAAGGCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKDHTCG*IIRHSF
Trigger: GAAGCTATGCCTTATTATGCATCCACATGTATGGTC...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCTCAGTAATAATTACTaGTGTTTCTTGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMLSNNY*CFLTDQ
Trigger: CTGGTCTGTCAAGAAACAGCAGTAATTATTACTGAG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATATTTGGTTAGGTTGCTaGTCCTTTAAAATGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDIWLGC*SFKMSL
Trigger: CAGACTCATTTTAAAGGAGCAGCAACCTAACCAAAT...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGTTAATATTTCTATGTTaGACACGTTCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMLIFLC*TRSSWD
Trigger: GTCCCATGAGGAACGTGTCCAACATAGAAATATTAA...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTGAGGTAATCGAGATTTaGATAGTCCAAGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSEVIEI*IVQAKR
Trigger: GCGCTTTGCTTGGACTATCCAAATCTCGATTACCTC...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAGTTTTCAGGCTTATTTaGATGACTAAGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAVFRLI*MTKEQR
Trigger: CCTTTGTTCCTTAGTCATCCAAATAAGCCTGAAAAC...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAAATCAAATTGTAAGGTaGACACAACATTCGCAACTG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLANQIVR*TQHSQL
Trigger: CAGTTGCGAATGTTGTGTCCACCTTACAATTTGATT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTACTGTGAATGTACTTTaGTCAAAGCATGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLTVNVL*SKHGGK
Trigger: CTTTCCACCATGCTTTGACCAAAGTACATTCACAGT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGGAGTCAGCAAACTGTTaGAAAACAGAGAGAAATTGT +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMESANC*KTERNC
Trigger: ACAATTTCTCTCTGTTTTCCAACAGTTTGCTGACTC...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTCTCTGCGAGCTTCTCTaGATAAAATGTGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLLCELL*IKCVDF
Trigger: AAAATCAACACATTTTATTCAGAGAAGCTCGCAGAG...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGATTCTATGGGATGGCATaGAATCCAATGTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRFYGMA*NPMFIL
Trigger: AAGGATGAACATTGGATTTCATGCCATCCCATAGAA...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR TCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAATCAAGACTGACTTCTaGAATGCAGAAACGTATGTG +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRIKTDF*NAETYV
Trigger: CACATACGTTTCTGCATTTCAGAAGTCAGTCTTGAT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTATGTTATCACCTTCATTaGACAGGAGTTATATCATTC +
Preference number: 4 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVCYHLH*TGVISF
Trigger: GAATGATATAACTCCTGTGCAATGAAGGTGATAACA...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAGACCATACATGTGGATaGATAATAAGGCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRDHTCG*IIRHSF
Trigger: GAAGCTATGCCTTATTATGCATCCACATGTATGGTC...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR GCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATGTATTTGGTTAGGTTaGTGCTCCTTTAAAATGAGT +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLACIWLG*CSFKMS
Trigger: ACTCATTTTAAAGGAGCAGCAACCTAACCAAATACA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTCTTCTTGCTCTTCTCTaGTATCTCCAAAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLLLALL*YLQSYF
Trigger: GAAATAACTTTGGAGATAGCAGAGAAGAGCAAGAAG...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAACTTCTCTTCAAACTTaGCAAAATACCTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLATSLQT*QNTSLL
Trigger: CAGTAAAGAGGTATTTTGCCAAGTTTGAAGAGAAGT...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGTTAATATTTCTATGTTaGACACGTTCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKLIFLC*TRSSWD
Trigger: GTCCCATGAGGAACGTGTCCAACATAGAAATATTAA...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAAAGGGAACACATTTTaGAAGCTAGTCAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMKGNTF*KLVRIK
Trigger: CTTTATTCTGACTAGCTTCCAAAATGTGTTCCCTTT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATATTTGGAGAGTATGCTaGTTAGATCATTGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDIWRVC*LDHWFV
Trigger: TACAAACCAATGATCTAACCAGCATACTCTCCAAAT...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
3UTR CAA 72 bp GTAGATATACTGAATCCAAGGCAAACAATAGGTTATTaGATTGTCCTCCTTAGGTTGATGGCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: VDILNPRQTIGY*IVLLRLMAPYK
Trigger: TTTGTATGGTGCCATCAACCTAAGGAGGACAATCAAATAACCTATTGTTTGCCTTGGATTCAGTATATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR TCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTTTTATAAGTTACTACTaGGGTGAATGGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSFISYY*GEWCSP
Trigger: GGGAGAACACCATTCACCTCAGTAGTAACTTATAAA...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR GCA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTTGTTATCACCTTCATTaGACAGGAGTTATATCATTC +
Preference number: 4 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLCYHLH*TGVISF
Trigger: GAATGATATAACTCCTGTGCAATGAAGGTGATAACA...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTTCACATCCTCTATTATaGCACAGTAGTAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSSHPLL*HSSSRL
Trigger: AAGCCTACTACTACTGTGCCATAATAGAGGATGTGA...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTGTTAAGGTTGAAATATaGGCCAGTGTATTCCACATC +
Preference number: 4 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSVKVEI*ASVFHI
Trigger: GATGTGGAATACACTGGCCCATATTTCAACCTTAAC...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAGTTTCAGAGATAAGCTaGTTGATTTTCTTGCATGTA +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRVSEIS*LIFLHV
Trigger: TACATGCAAGAAAATCAACCAGCTTATCTCTGAAAC...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CCA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAAAACAGGTTTTCTATaGGATGGCATGAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRKTGFL*DGMKSN
Trigger: ATTGGATTTCATGCCATCCCATAGAAAACCTGTTTT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
3UTR CAA 72 bp AAGGTAATATGGTGGAAGTTTAGTCAAGTAACTGGTTaGAAGGTATACGAGACTGTGTACTTAGTAGATATA +
Preference number: 4 (lower is better)
Translates to: KVIWWKFSQVTG*KVYETVYLVDI
Trigger: TATATCTACTAAGTACACAGTCTCGTATACCTTCAAACCAGTTACTTGACTAAACTTCCACCATATTACCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGTGGAGTCTTGCTCTGTaGCCCAGGCAGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRWSLAL*PRQWQW
Trigger: CCACTGCCACTGCCTGGGCAACAGAGCAAGACTCCA...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp AGCGAGGCGAGGCCGGCGCAGGGATATGCTCTGGTTGTACTTCCATaGCCGATTCTTCTGGCGGTTTCGTACCCCATCATCCTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SEARPAQGYALVVLP*PILLAVSYPIILVH
Trigger: ATGGACCAGGATGATGGGGTACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCGGCCTCGCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS GCA 90 bp AAAGCCTCATACTGGATGTATTGCTTCCTCCACTCGGGAGTGATGTaGGCGGAGAGGTGCTCGGCGAACTTCATCCTGCCGTTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: KASYWMYCFLHSGVM*AERCSANFILPFPP
Trigger: AGGGGGAAACGGCAGGATGAAGTTCGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATACATCCAGTATGAGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS GCA 90 bp CACGAGCCTTGGATTGAGAAGCGAGGCGAGGCCGGCGCAGGGATATaGTCTGGTTGTACTTCCATGACCGATTCTTCTGGCGGTTTCGTA +
Preference number: 5 (lower is better)
Translates to: HEPWIEKRGEAGAGI*SGCTSMTDSSGGFV
Trigger: TACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGGTCACGAGCCTTGGATaGAGAAGCGAGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKVTSLG*RSEARP
Trigger: CGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTGAC...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 90 bp GAGGAAAGGCCCTTTTTGTGTCTCGATATCGGCGCAGGCACTGGATaGAGCGAAGCCAAGCAGGAATGCACTGAACAATGGCCCGCACAC +
Preference number: 5 (lower is better)
Translates to: EERPFLCLDIGAGTG*SEAKQECTEQWPAH
Trigger: GTGTGCGGGCCATTGTTCAGTGCATTCCTGCTTGGCTTCGCTTCATCCAGTGCCTGCGCCGATATCGAGACACAAAAAGGGCCTTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCGACTGGCTTTCTGCGTaGTCGCAGCGTAGTAACACC +
Preference number: 5 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSDWLSA*SQRSNT
Trigger: GGTGTTACTACGCTGCGACAACGCAGAAAGCCAGTC...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGTCTTTCCCTCTGATTaGTGGTGGCACAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRVFPSD*WWHRGK
Trigger: CTTTCCTCTGTGCCACCACAAATCAGAGGGAAAGAC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS CCA 90 bp CGGCGCAGGGATATGCTCTGGTTGTACTTCCATGACCGATTCTTCTaGCGGTTTCGTACCCCATCATCCTGGTCCATCATCTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: RRRDMLWLYFHDRFF*RFRTPSSWSIICSR
Trigger: CCTAGAACAGATGATGGACCAGGATGATGGGGTACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGACTGGCTTTCTGCGTaGTCGCAGCGTAGTAACACC +
Preference number: 5 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYDWLSA*SQRSNT
Trigger: GGTGTTACTACGCTGCGACAACGCAGAAAGCCAGTC...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCGGAAGTTAAGCAGCTaGCCTAAGGAGCCTAATGGT +
Preference number: 5 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSRKLSS*PKEPNG
Trigger: ACCATTAGGCTCCTTAGGCAAGCTGCTTAACTTCCG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCCTCCAACCATACGTGTaGATGCCCAGTAGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSLQPYV*MPSRKR
Trigger: CCTTTTTCTACTGGGCATCAACACGTATGGTTGGAG...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAGACCCCAGTCCATCTaGAGATCCCAGATGAGGGTA +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKRPQSI*RSQMRV
Trigger: TACCCTCATCTGGGATCTCAAGATGGACTGGGGTCT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGTCAAACTGGTGCAAGTaGTCTCCTGAAAGAGGTATG +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRSNWCK*SPERGM
Trigger: CATACCTCTTTCAGGAGACAACTTGCACCAGTTTGA...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGACTTTCCTAACTGCCTaGCTGCGGCTTACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKTFLTA*LRLTAN
Trigger: GTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAAAGT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGAATACAGCATATCCTaGAAAGCCTCATACTGGATG +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQREYSIS*KASYWM
Trigger: CATCCAGTATGAGGCTTTCAAGGATATGCTGTATTC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTAAGCGGACAGATGGAGGCATCACCTTCGCGTCATCAGGCTCACGTACTTTCCAGGTACTGCTTTAAGTaGCACTTTTCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: LSGQMEASPSRHQAHVLSRYCFK*HFSCKC
Trigger: GCACTTGCAGGAAAAGTGCAACTTAAAGCAGTACCT...GGAAAGTACGTGAGCCTGATGACGCGAAGGTGATGCCTCCATCTGTCCGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp TATCGGCGCAGGCACTGGATGAAGCGAAGCCAAGCAGGAATGCACTaGACAATGGCCCGCACACCATATGTATATTTGTGGCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: YRRRHWMKRSQAGMH*TMARTPYVYLWQIP
Trigger: AGGAATTTGCCACAAATATACATATGGTGTGCGGGCCATTGTTCAGTGCATTCCTGCTTGGCTTCGCTTCATCCAGTGCCTGCGCCGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGAGGGATATGCTCTGGTaGTACTTCCATGACCGATTC +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKRDMLW*YFHDRF
Trigger: GAATCGGTCATGGAAGTACAACCAGAGCATATCCCT...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGGTACTAGAGGTTGCGTaGGTCGAGGAAAGGATTGTA +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKVLEVA*VEERIV
Trigger: TACAATCCTTTCCTCGACCAACGCAACCTCTAGTAC...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGTTCTTCTGAATTATTaGGCAACAGGCCCTTACTTT +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRVLLNY*ATGPYF
Trigger: AAAGTAAGGGCCTGTTGCCAAATAATTCAGAAGAAC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367589.3
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGCCATCTTCAAGTTCATaGGTCACTACAGCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKPSSSS*VTTASV
Trigger: AACTGAGGCTGTAGTGACCAATGAACTTGAAGATGG...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATAGAAACACAGTGAGCTaGTTTGGAGTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYRNTVS*FGVHRI
Trigger: GATCCTATGGACTCCAAACAAGCTCACTGTGTTTCT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATAGGTACTGCTTTAAGTaGCACTTTTCCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYRYCFK*HFSCKC
Trigger: GCACTTGCAGGAAAAGTGCAACTTAAAGCAGTACCT...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTCAAACTGGTGCAAGTaGTCTCCTGAAAGAGGTATG +
Preference number: 5 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYSNWCK*SPERGM
Trigger: CATACCTCTTTCAGGAGACAACTTGCACCAGTTTGA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGGGCTGCCAAGGTCTTTaGTATCAACATAATATGAAT +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRGCQGL*YQHNMN
Trigger: ATTCATATTATGTTGATACAAAAGACCTTGGCAGCC...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGCTGCTGGTATTGACTTaGAAATTTTCATTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRLLVLT*KFSFGS
Trigger: AGACCCAAATGAAAATTTCAAAGTCAATACCAGCAG...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTCAAAACCGGGCTGAGCGGAAGCCGAGATATCTCAGTACCGTCCCATCAGAGGCAAACAATAGGTTATTaGATTGTCCTCCTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: VKTGLSGSRDISVPSHQRQTIGY*IVLLRL
Trigger: CAACCTAAGGAGGACAATCAAATAACCTATTGTTTG...CCTCTGATGGGACGGTACTGAGATATCTCGGCTTCCGCTCAGCCCGGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS CCA 90 bp TCCATAAAGGGCAAGTGGATACACATATGTGGGGATGACACTAATTaGAGCAAAGAAGCATGCCAGAAGGCTCAGGCACCACAATATCCC +
Preference number: 5 (lower is better)
Translates to: SIKGKWIHICGDDTN*SKEACQKAQAPQYP
Trigger: GGGATATTGTGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCAATTAGTGTCATCCCCACATATGTGTATCCACTTGCCCTTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGGTAGTAGTAGGCTTTTaGGGGGTATACAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKVVVGF*GVYNLF
Trigger: GAAGAGATTGTATACCCCCAAAAAGCCTACTACTAC...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAGTCACGAGCCTTGGATaGAGAAGCGAGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRVTSLG*RSEARP
Trigger: CGGCCTCGCCTCGCTTCTCAATCCAAGGCTCGTGAC...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCCCCATCAGAGGGTCCTaGCAATGCCTGTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLPIRGS*QCLFFI
Trigger: GATGAAGAACAGGCATTGCAAGGACCCTCTGATGGG...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS CCA 90 bp AGGTCTTTAATATTTCTATGTTGGACACGTTCCTCATGGGACAAGTaGAAGACTGGCTTTCTGCGTTGTCGCAGCGTAGTAACACCAGTG +
Preference number: 5 (lower is better)
Translates to: RSLIFLCWTRSSWDK*KTGFLRCRSVVTPV
Trigger: CACTGGTGTTACTACGCTGCGACAACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATATTAAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGGATGTTTCCAGGATCTaGTCATGCTTTTTCAGGATT +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKDVSRI*SCFFRI
Trigger: AATCCTGAAAAAGCATGACAAGATCCTGGAAACATC...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TGCTTTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATTTCTGGCTAAAGTGGTaGAACCCAGAAGAAAAACTA +
Preference number: 5 (lower is better)
Translates to: CFKLHFSCKCGQCLCAGYFWLKW*NPEEKL
Trigger: TAGTTTTTCTTCTGGGTTCAACCACTTTAGCCAGAA...ATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TTAAGTTGCACTTTTCCTGCAAGTGCGGCCAGTGCCTTTGCGCTGGGTATGAAGTTCTGGCTAAAGTGGTaGAACCCAGAAGAAAAACTA +
Preference number: 5 (lower is better)
Translates to: LSCTFPASAASAFALGMKFWLKW*NPEEKL
Trigger: TAGTTTTTCTTCTGGGTTCAACCACTTTAGCCAGAA...CTTCATACCCAGCGCAAAGGCACTGGCCGCACTTGCAGGAAAAGTGCAACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGGTCTCCCAAGCTCTCTaGATGAGGAAAAGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKVSQAL*MRKSPL
Trigger: AAGAGGACTTTTCCTCATCAAGAGAGCTTGGGAGAC...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp TGTGTCCTCATCTGTAACTTCCACAGAAGGTGCCTGGTCCTGAGCTaGATACAGCATATCCTTGAAAGCCTCATACTGGATGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: CVLICNFHRRCLVLS*IQHILESLILDVLL
Trigger: AAGCAATACATCCAGTATGAGGCTTTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGATGAGGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CCA 90 bp AATATTTCTATGTTGGACACGTTCCTCATGGGACAAGTGGAAGACTaGCTTTCTGCGTTGTCGCAGCGTAGTAACACCAGTGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: NISMLDTFLMGQVED*LSALSQRSNTSAFF
Trigger: AAAGAAAGCACTGGTGTTACTACGCTGCGACAACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CCA 90 bp GCCAGTTTAAGGTCTTTAATATTTCTATGTTGGACACGTTCCTCATaGGACAAGTGGAAGACTGGCTTTCTGCGTTGTCGCAGCGTAGTA +
Preference number: 5 (lower is better)
Translates to: ASLRSLIFLCWTRSS*DKWKTGFLRCRSVV
Trigger: TACTACGCTGCGACAACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATATTAAAGACCTTAAACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGATGTTCTCCCACACCTTaGCTTCTGACGGAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: SEIALSSDSELVKVTLQGCSPTP*LLTEVK
Trigger: CTTAACTTCCGTCAGAAGCAAAGGTGTGGGAGAACA...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GATAATTCATACAAGAAAGGCATCATGAGCCATGCCAATCAACAGGCTCCTCTCACGTCCAACATCTTCTaGCTCTTCTCTGCTATCTCC +
Preference number: 5 (lower is better)
Translates to: DNSYKKGIMSHANQQAPLTSNIF*LFSAIS
Trigger: GGAGATAGCAGAGAAGAGCAAGAAGATGTTGGACGT...GAGAGGAGCCTGTTGATTGGCATGGCTCATGATGCCTTTCTTGTATGAATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACCCACCATGCTGGTGTaGCTACAGGGCAATCAGGGA +
Preference number: 5 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRPTMLV*LQGNQG
Trigger: TCCCTGATTGCCCTGTAGCAACACCAGCATGGTGGG...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp TTTACTGTGTCCTCATCTGTAACTTCCACAGAAGGTGCCTGGTCCTaGGCTGAATACAGCATATCCTTGAAAGCCTCATACTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: FTVSSSVTSTEGAWS*AEYSISLKASYWMY
Trigger: ATACATCCAGTATGAGGCTTTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGATGAGGACACAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTGAGGAAAGGCCCTTTTaGTGTCTCGATATCGGCGCA +
Preference number: 5 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLEERPF*CLDIGA
Trigger: TGCGCCGATATCGAGACACAAAAAGGGCCTTTCCTC...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGGTAGTAGTAGGCTTTTaGGGGGTATACAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKVVVGF*GVYNLF
Trigger: GAAGAGATTGTATACCCCCAAAAAGCCTACTACTAC...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GAGTCCATAGGATCCGATCCGGAAGAGCTCGGAAAATGTGTTATGTGTTTTCTCCTTCAGCTGTTAAGGTaGAAATATGGGCCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: ESIGSDPEELGKCVMCFLLQLLR*KYGPVY
Trigger: ATACACTGGCCCATATTTCAACCTTAACAGCTGAAG...GAGAAAACACATAACACATTTTCCGAGCTCTTCCGGATCGGATCCTATGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GGAAGTGCAGGTAGGGACTTCAGAGATAATGATCAAGGGATAGTGAGATGGAAGAGTCAAGTAACTGGTTaGAAGGTATACGAGACTGTG +
Preference number: 5 (lower is better)
Translates to: GSAGRDFRDNDQGIVRWKSQVTG*KVYETV
Trigger: CACAGTCTCGTATACCTTCAAACCAGTTACTTGACT...CTTCCATCTCACTATCCCTTGATCATTATCTCTGAAGTCCCTACCTGCACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp TTCCTAACTGCCTTGCTGCGGCTTACTGCCAACGTCCAACATCTTCTTGCTCTTCCTAAATACTCTTCATaGATACAAGCTTCTGTGCTA +
Preference number: 5 (lower is better)
Translates to: FLTALLRLTANVQHLLALPKYSS*IQASVL
Trigger: TAGCACAGAAGCTTGTATCAATGAAGAGTATTTAGG...AAGAGCAAGAAGATGTTGGACGTTGGCAGTAAGCCGCAGCAAGGCAGTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAGAATACAGCATATCCTaGAAAGCCTCATACTGGATG +
Preference number: 5 (lower is better)
Translates to: SEIALSSDSELVKVTLQGEYSIS*KASYWM
Trigger: CATCCAGTATGAGGCTTTCAAGGATATGCTGTATTC...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCTCCAACCATACGTGTaGATGCCCAGTAGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMLQPYV*MPSRKR
Trigger: CCTTTTTCTACTGGGCATCAACACGTATGGTTGGAG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATATTCTTCTGAATTATTaGGCAACAGGCCCTTACTTT +
Preference number: 5 (lower is better)
Translates to: MSHANQQAPLCSQANFLYILLNY*ATGPYF
Trigger: AAAGTAAGGGCCTGTTGCCAAATAATTCAGAAGAAT...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAGACCCCAGTCCATCTaGAGATCCCAGATGAGGGTA +
Preference number: 5 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRPQSI*RSQMRV
Trigger: TACCCTCATCTGGGATCTCAAGATGGACTGGGGTCT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCAGTACTAGAGGTTGCGTaGGTCGAGGAAAGGATTGTA +
Preference number: 5 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAVLEVA*VEERIV
Trigger: TACAATCCTTTCCTCGACCAACGCAACCTCTAGTAC...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp ATGAGCCATGCCAATCAACAGGCTCCTCTCTGTTCTCAGGCAAACTTCCTGTATGGCTGCCAAGGTCTTTaGTATCAACATAATATGAAT +
Preference number: 5 (lower is better)
Translates to: MSHANQQAPLCSQANFLYGCQGL*YQHNMN
Trigger: ATTCATATTATGTTGATACAAAAGACCTTGGCAGCC...ATACAGGAAGTTTGCCTGAGAACAGAGAGGAGCCTGTTGATTGGCATGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGCCATCTTCAAGTTCATaGGTCACTACAGCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMPSSSS*VTTASV
Trigger: AACTGAGGCTGTAGTGACCAATGAACTTGAAGATGG...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp TCTGAAATAGCTCTGTCTTCTGATTCAGAGCTAGTAAAGGTCACGCTACAGGGAGTTGCACATGGGTTTTaGACTACTTTCCAATCTTAC +
Preference number: 5 (lower is better)
Translates to: SEIALSSDSELVKVTLQGVAHGF*TTFQSY
Trigger: GTAAGATTGGAAAGTAGTCAAAAACCCATGTGCAAC...TCCCTGTAGCGTGACCTTTACTAGCTCTGAATCAGAAGACAGAGCTATTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp GTTCTTCTGAATTATTTGGCAACAGGCCCTTACTTTCATCCCATTTaGGCTCCAAACTGTAGAAGCAGATCATATATTCCAGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: VLLNYLATGPYFHPI*APNCRSRSYIPGPS
Trigger: TGATGGACCTGGAATATATGATCTGCTTCTACAGTTTGGAGCTCAAATGGGATGAAAGTAAGGGCCTGTTGCCAAATAATTCAGAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367589.3
CDS TCA 90 bp TACTTTCCTAACTGCCTTGCCGTAGTTCACCTATCCAGAAATGGATaGTCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: YFPNCLAVVHLSRNG*SAFSSYCECTLVKA
Trigger: TGCTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGGATAGGTGAACTACGGCAAGGCAGTTAGGAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467345.1
CDS-3UTR CAA 90 bp AAATTTTCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGAAGGGATATGCTCTGGTaGTACTTCCATGACCGATTC +
Preference number: 5 (lower is better)
Translates to: KFSSNSNFYWSYDRDGSRRDMLW*YFHDRF
Trigger: GAATCGGTCATGGAAGTACAACCAGAGCATATCCCT...TCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTTCCTGTATGGACTACCTTAGGCTCTTCCAAACCTAATGAGATGTTTTTACTTAGAAACACAGTGAGCTaGTTTGGAGTCCATAGGATC +
Preference number: 5 (lower is better)
Translates to: LPVWTTLGSSKPNEMFLLRNTVS*FGVHRI
Trigger: GATCCTATGGACTCCAAACAAGCTCACTGTGTTTCT...AAGTAAAAACATCTCATTAGGTTTGGAAGAGCCTAAGGTAGTCCATACAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CTCTTTCTTAGAAGTCCACAACTTTCTAGAAGTACTGCAGTCTTTCCCTCTGATCTTCAGCTGTTAAGGTaGAAATATGGGCCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: LFLRSPQLSRSTAVFPSDLQLLR*KYGPVY
Trigger: ATACACTGGCCCATATTTCAACCTTAACAGCTGAAG...ATCAGAGGGAAAGACTGCAGTACTTCTAGAAAGTTGTGGACTTCTAAGAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS TCA 90 bp ATTCTTCTGAATTATTTGGCAACAGGCCCTTACTTTCATCCCATTTaGGCTCCAAACTGTAGAAGCAGATCATATATTCCAGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: ILLNYLATGPYFHPI*APNCRSRSYIPGPS
Trigger: TGATGGACCTGGAATATATGATCTGCTTCTACAGTTTGGAGCTCAAATGGGATGAAAGTAAGGGCCTGTTGCCAAATAATTCAGAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp TCTAGTAACAGTAACTTTTACTGGAGTTACGACAGGGATGGGTCAAGACTTGTAGATGTTTCCAGGATCTaGTCATGCTTTTTCAGGATT +
Preference number: 5 (lower is better)
Translates to: SSNSNFYWSYDRDGSRLVDVSRI*SCFFRI
Trigger: AATCCTGAAAAAGCATGACAAGATCCTGGAAACATC...TACAAGTCTTGACCCATCCCTGTCGTAACTCCAGTAAAAGTTACTGTTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CCAGAAATGGATGATCTGCTTTCTCTAGTTACTGTGAATGTACTTTGGTCAAAGATGCTGGTTAGATCATaGGTTTGTAACACCAACCAG +
Preference number: 5 (lower is better)
Translates to: PEMDDLLSLVTVNVLWSKMLVRS*VCNTNQ
Trigger: CTGGTTGGTGTTACAAACCAATGATCTAACCAGCAT...CTTTGACCAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp GTTATGAGAGATATGCTCAGGACTCTAAAGCAGCAGCAACTTAAGAAGTTAGCATTTAATATTTCTATGTaGGACACGTTCCTCATGGGA +
Preference number: 5 (lower is better)
Translates to: VMRDMLRTLKQQQLKKLAFNISM*DTFLMG
Trigger: TCCCATGAGGAACGTGTCCAACATAGAAATATTAAA...TGCTAACTTCTTAAGTTGCTGCTGCTTTAGAGTCCTGAGCATATCTCTCATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS-3UTR CAA 90 bp CTATGGGATGGCATGAAATCCAATGTTCATCCTTTAAAACTGCTGGGAGAAATGAATATAGGCACTCATTaGTGCATAGACAGTAAACCA +
Preference number: 5 (lower is better)
Translates to: LWDGMKSNVHPLKLLGEMNIGTH*CIDSKP
Trigger: TGGTTTACTGTCTATGCACAAATGAGTGCCTATATT...CATTTCTCCCAGCAGTTTTAAAGGATGAACATTGGATTTCATGCCATCCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTTACTGTGAATGTACTTaGGTCAAAGCATGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSYCECT*VKAWWK
Trigger: TTTCCACCATGCTTTGACCAAAGTACATTCACAGTA...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS-3UTR CAA 90 bp CATACTTCAGTTGCAAAGTTGTATAATGATTCTCCTCACTTTAAGGGAAACTCTCTGCTGGTATTGACTTaGAAATTTTCATTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: HTSVAKLYNDSPHFKGNSLLVLT*KFSFGS
Trigger: AGACCCAAATGAAAATTTCAAAGTCAATACCAGCAG...AGAGTTTCCCTTAAAGTGAGGAGAATCATTATACAACTTTGCAACTGAAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS GCA 72 bp GTGGGGGAAGGTGGCAGCAGCGATGGGGAGTTCAGGTaGCAGGCCGAGGCATTCAGGAAGGTGAGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: VGEGGSSDGEFR*QAEAFRKVRKG
Trigger: TCCCTTCCTCACCTTCCTGAATGCCTCGGCCTGGCACCTGAACTCCCCATCGCTGCTGCCACCTTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464817.1
CDS GCA 72 bp TACTGGATGTATTGCTTCCTCCACTCGGGAGTGATGTaGGCGGAGAGGTGCTCGGCGAACTTCATCCTGCCG +
Preference number: 6 (lower is better)
Translates to: YWMYCFLHSGVM*AERCSANFILP
Trigger: CGGCAGGATGAAGTTCGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATACATCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp GAAGCGAGGCGAGGCCGGCGCAGGGATATGCTCTGGTaGTACTTCCATGACCGATTCTTCTGGCGGTTTCGT +
Preference number: 6 (lower is better)
Translates to: EARRGRRRDMLW*YFHDRFFWRFR
Trigger: ACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCGGCCTCGCCTCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp CCTCATACTGGATGTATTGCTTCCTCCACTCGGGAGTaGTGTGCGCGGAGAGGTGCTCGGCGAACTTCATCC +
Preference number: 6 (lower is better)
Translates to: PHTGCIASSTRE*CARRGARRTSS
Trigger: GGATGAAGTTCGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATACATCCAGTATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS GCA 72 bp TGGATTGAGAAGCGAGGCGAGGCCGGCGCAGGGATATaGTCTGGTTGTACTTCCATGACCGATTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: WIEKRGEAGAGI*SGCTSMTDSSG
Trigger: GCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCGGCCTCGCCTCGCTTCTCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp AGGCCGGCGCAGGGATATGCTCTGGTTGTACTTCCATaGCCGATTCTTCTGGCGGTTTCGTACCCCATCATC +
Preference number: 6 (lower is better)
Translates to: RPAQGYALVVLP*PILLAVSYPII
Trigger: GATGATGGGGTACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATCCCTGCGCCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp CCCTTTTTGTGTCTCGATATCGGCGCAGGCACTGGATaGAGCGAAGCCAAGCAGGAATGCACTGAACAATGG +
Preference number: 6 (lower is better)
Translates to: PFLCLDIGAGTG*SEAKQECTEQW
Trigger: CCATTGTTCAGTGCATTCCTGCTTGGCTTCGCTTCATCCAGTGCCTGCGCCGATATCGAGACACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS GCA 72 bp AAATGGGGCCACCTCTACGTGAGCCACTCGCCAATCTaGTCCACGAGATGTTTCCAGGATCTTGTCATGCTT +
Preference number: 6 (lower is better)
Translates to: KWGHLYVSHSPI*STRCFQDLVML
Trigger: AAGCATGACAAGATCCTGGAAACATCTCGTGGAGCAGATTGGCGAGTGGCTCACGTAGAGGTGGCCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS GCA 72 bp TACAGCATATCCTTGAAAGCCTCATACTGGATGTATTaGTTCCTCCACTCGGGAGTGATGTGCGCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: YSISLKASYWMY*FLHSGVMCAER
Trigger: CCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATACATCCAGTATGAGGCTTTCAAGGATATGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp AGGCACTGGATGAAGCGAAGCCAAGCAGGAATGCACTaGACAATGGCCCGCACACCATATGTATATTTGTGG +
Preference number: 6 (lower is better)
Translates to: RHWMKRSQAGMH*TMARTPYVYLW
Trigger: CCACAAATATACATATGGTGTGCGGGCCATTGTTCAGTGCATTCCTGCTTGGCTTCGCTTCATCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367590.9
CDS CCA 72 bp GGCAAGTGGATACACATATGTGGGGATGACACTAATTaGAGCAAAGAAGCATGCCAGAAGGCTCAGGCACCA +
Preference number: 6 (lower is better)
Translates to: GKWIHICGDDTN*SKEACQKAQAP
Trigger: TGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCAATTAGTGTCATCCCCACATATGTGTATCCACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CCA 72 bp GATATGCTCTGGTTGTACTTCCATGACCGATTCTTCTaGCGGTTTCGTACCCCATCATCCTGGTCCATCATC +
Preference number: 6 (lower is better)
Translates to: DMLWLYFHDRFF*RFRTPSSWSII
Trigger: GATGATGGACCAGGATGATGGGGTACGAAACCGCCAGAAGAATCGGTCATGGAAGTACAACCAGAGCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp ATACAGCATATCCTTGAAAGCCTCATACTGGATGTATaGCTTCCTCCACTCGGGAGTGATGTGCGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: IQHILESLILDV*LPPLGSDVRGE
Trigger: CTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAATACATCCAGTATGAGGCTTTCAAGGATATGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CCA 72 bp GAAGAAGTTCCACACAAATCGCCGGAAAACCTCAAGTaGGGCAAAGACAGTAGCAATGATGTCCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: EEVPHKSPENLK*GKDSSNDVPRM
Trigger: CATTCTGGGGACATCATTGCTACTGTCTTTGCCCCACTTGAGGTTTTCCGGCGATTTGTGTGGAACTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp TCCTCATCTGTAACTTCCACAGAAGGTGCCTGGTCCTaGGCTGAATACAGCATATCCTTGAAAGCCTCATAC +
Preference number: 6 (lower is better)
Translates to: SSSVTSTEGAWS*AEYSISLKASY
Trigger: GTATGAGGCTTTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CCA 72 bp ATATTTCTATGTTGGACACGTTCCTCATGGGACAAGTaGAAGACTGGCTTTCTGCGTTGTCGCAGCGTAGTA +
Preference number: 6 (lower is better)
Translates to: IFLCWTRSSWDK*KTGFLRCRSVV
Trigger: TACTACGCTGCGACAACGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp ATCTGTAACTTCCACAGAAGGTGCCTGGTCCTGAGCTaGATACAGCATATCCTTGAAAGCCTCATACTGGAT +
Preference number: 6 (lower is better)
Translates to: ICNFHRRCLVLS*IQHILESLILD
Trigger: ATCCAGTATGAGGCTTTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp AGTGGGGCAAAGACAGTAGCAATGATGTCCCCAGAATaGGGCAACAAAGTTGTAGAGGTAATCGAGATTTGG +
Preference number: 6 (lower is better)
Translates to: SGAKTVAMMSPE*GNKVVEVIEIW
Trigger: CCAAATCTCGATTACCTCTACAACTTTGTTGCCTCATTCTGGGGACATCATTGCTACTGTCTTTGCCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367589.3
ENST00000367590.9
ENST00000464817.1
ENST00000498177.1
CDS GCA 72 bp CGAGTGACCTCGTTCTTTGTGAGTGCTGTAAAGGGCTaGAAACGTCACCATGAAGAAAGTTGTGGAGTATTT +
Preference number: 6 (lower is better)
Translates to: RVTSFFVSAVKG*KRHHEESCGVF
Trigger: AAATACTCCACAACTTTCTTCATGGTGACGTTTGCAGCCCTTTACAGCACTCACAAAGAACGAGGTCACTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367590.9
ENST00000498177.1
CDS CAA 90 bp GTAGAACTCACTGAAGGCCAGTTTAAGGTCTTTAATATTTCTATGTaGGACACGTTCCTCATGGGACAAGTGGAAGACTGGCTTTCTGCG +
Preference number: 6 (lower is better)
Translates to: VELTEGQFKVFNISM*DTFLMGQVEDWLSA
Trigger: CGCAGAAAGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATATTAAAGACCTTAAACTGGCCTTCAGTGAGTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp ACTCGCCAATCTGCTCCACGAGATGTTTCCAGGATCTaGTCATGCTTTTTCAGGATTTTTCGAAACCCTGTA +
Preference number: 6 (lower is better)
Translates to: TRQSAPRDVSRI*SCFFRIFRNPV
Trigger: TACAGGGTTTCGAAAAATCCTGAAAAAGCATGACAAGATCCTGGAAACATCTCGTGGAGCAGATTGGCGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp CATGGTTTACTCCAGCCTGTCTCCAACCATACGTGTTaGTGCCCAGTAGAAAAAGGAATTCAATCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: HGLLQPVSNHTC*CPVEKGIQSEE
Trigger: TTCTTCTGATTGAATTCCTTTTTCTACTGGGCATCAACACGTATGGTTGGAGACAGGCTGGAGTAAACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp ACTGAAGGCCAGTTTAAGGTCTTTAATATTTCTATGTaGGACACGTTCCTCATGGGACAAGTGGAAGACTGG +
Preference number: 6 (lower is better)
Translates to: TEGQFKVFNISM*DTFLMGQVEDW
Trigger: CCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACATAGAAATATTAAAGACCTTAAACTGGCCTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp TTCATAGCCTTTTGTCTGTCACCATCTTCAAGTTCATaGGTCACTACAGCCTCAGTTTCAGAGATAAGCTGG +
Preference number: 6 (lower is better)
Translates to: FIAFCLSPSSSS*VTTASVSEISW
Trigger: CCAGCTTATCTCTGAAACTGAGGCTGTAGTGACCAATGAACTTGAAGATGGTGACAGACAAAAGGCTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS CAA 72 bp ACATGGTTTACTCCAGCCTGTCTCCAACCATACGTGTaGATGCCCAGTAGAAAAAGGAATTCAATCAGAAGA +
Preference number: 6 (lower is better)
Translates to: TWFTPACLQPYV*MPSRKRNSIRR
Trigger: TCTTCTGATTGAATTCCTTTTTCTACTGGGCATCAACACGTATGGTTGGAGACAGGCTGGAGTAAACCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp AACTGCCTTGCCGTAGTTCACCTATCCAGAAATGGATaGTCTGCTTTCTCTAGTTACTGTGAATGTACTTTG +
Preference number: 6 (lower is better)
Translates to: NCLAVVHLSRNG*SAFSSYCECTL
Trigger: CAAAGTACATTCACAGTAACTAGAGAAAGCAGATCATCCATTTCTGGATAGGTGAACTACGGCAAGGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467345.1
CDS CCA 72 bp AAATTGCTTCTCGGATTAAGTTCAAAGATGAGTACATaGTTTACTCCAGCCTGTCTCCAACCATACGTGTTG +
Preference number: 6 (lower is better)
Translates to: KLLLGLSSKMST*FTPACLQPYVL
Trigger: CAACACGTATGGTTGGAGACAGGCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCCGAGAAGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9
CDS TCA 72 bp AATTATTTGGCAACAGGCCCTTACTTTCATCCCATTTaGGCTCCAAACTGTAGAAGCAGATCATATATTCCA +
Preference number: 6 (lower is better)
Translates to: NYLATGPYFHPI*APNCRSRSYIP
Trigger: TGGAATATATGATCTGCTTCTACAGTTTGGAGCTCAAATGGGATGAAAGTAAGGGCCTGTTGCCAAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367589.3
ENST00000367590.9