RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPO7 (Homo sapiens)

Ensembl gene IDs: ENSG00000130227

Ensembl transcript IDs: ENST00000252512.14, ENST00000433566.8, ENST00000517551.2, ENST00000518017.1, ENST00000518808.1, ENST00000519769.5, ENST00000520754.1, ENST00000521303.5, ENST00000522015.1

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTaGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAGTCCAAG +
Preference number: 1 (lower is better)
Translates to: SQDQPGPLPCNCSPL*AKPKGRCSVQVESK
Trigger: CTTGGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR GCA 90 bp TTTATTGGCCACACACAGCAGGGCCTCTGGTGGACTCACCCACATTaGTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGGTCTCT +
Preference number: 1 (lower is better)
Translates to: FIGHTQQGLWWTHPH*SQESSGLTSFSLVS
Trigger: AGAGACCAGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGGCCAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 90 bp CATCCACACACACTGCCTCGAGGGCTGGGGAAGACTAAAATTTATTaGCCACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTC +
Preference number: 1 (lower is better)
Translates to: HPHTLPRGLGKTKIY*PHTAGPLVDSPTLL
Trigger: GAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGGCCAATAAATTTTAGTCTTCCCCAGCCCTCGAGGCAGTGTGTGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR GCA 90 bp TTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGGTCTCTaGCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCA +
Preference number: 1 (lower is better)
Translates to: LLPGEQWAHFLLSGL*LHTDQEPYNTSLNP
Trigger: TGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 90 bp GACCCAGGGCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTaGCATGGCTTAGAGTTCCTAATAACAAGGGTTAATACAGTAACA +
Preference number: 1 (lower is better)
Translates to: DPGQNLHGPRGGTVF*HGLEFLITRVNTVT
Trigger: TGTTACTGTATTAACCCTTGTTATTAGGAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGCCCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 90 bp AAAGTAGGAAAGAGGGTGGAGATAAGAACACCAAACACTTTTAGCTaGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCAGAAT +
Preference number: 1 (lower is better)
Translates to: KVGKRVEIRTPNTFS*SYLSLQGARDPGQN
Trigger: ATTCTGCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTGTTCTTATCTCCACCCTCTTTCCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CAA 90 bp CCCTGGAGAAAAGAGCCAGGATCAGCCAGGCCCTCTCCCTTGCAATaGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACA +
Preference number: 2 (lower is better)
Translates to: PWRKEPGSARPSPLQ*FAPLGQTKGTLLCT
Trigger: TGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGGCTCTTTTCTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CAA 90 bp ATTTATTGGCCACACACAGCAGGGCCTCTGGTGGACTCACCCACATaGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: IYWPHTAGPLVDSPT*LPGEQWAHFLLSGL
Trigger: GAGACCAGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGGCCAATAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACTTCTCCCCACTTGGGTaGCCCCAGGAGGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHFSPLG*PQEERL
Trigger: CAGCCTCTCCTCCTGGGGCCACCCAAGTGGGGAGAA...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGAACCAGCAGCGCCCTaGCCCCTAGTGAGTGTACTC +
Preference number: 2 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHEPAAP*PLVSVL
Trigger: GAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFKPKGR*SVQVES
Trigger: GGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTT...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAACCAGGCCCTCTCCCTTaGAATTGTTCGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKPGPLP*NCSPLW
Trigger: CCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGG...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACAATTGTTCGCCCCTCTaGGCCAAACCAAAGGGACGC +
Preference number: 2 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHNCSPL*AKPKGR
Trigger: GCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGTTCTCCCCACTTGGGTaGCCCCAGGAGGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRFSPLG*PQEERL
Trigger: CAGCCTCTCCTCCTGGGGCCACCCAAGTGGGGAGAA...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTCCCTCACATCAGCATTaGTGCACTAGACTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSPSHQH*CTRLCK
Trigger: TTTACAGAGTCTAGTGCACCAATGCTGATGTGAGGG...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR TCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTTTGATCATTTCTGGGTaGGGACAGGGCAATACGAAA +
Preference number: 2 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVLIISG*GQGNTK
Trigger: TTTCGTATTGCCCTGTCCTCACCCAGAAATGATCAA...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATACAAGGCAGGTTGTaGCAGGACACTAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHIQGRL*QDTRGS
Trigger: AGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTAT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGGAGGGACGGTGTTCTaGCATGGCTTAGAGTTCCTA +
Preference number: 2 (lower is better)
Translates to: LKARGICLRMRVSKVGKRGGTVF*HGLEFL
Trigger: TAGGAACTCTAAGCCATGCCAGAACACCGTCCCTCC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCC +
Preference number: 2 (lower is better)
Translates to: LKARGICLRMRVSKVGKRKPKGR*SVQVES
Trigger: GGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGATACAAGGCAGGTTGTaGCAGGACACTAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: LKARGICLRMRVSKVGKRIQGRL*QDTRGS
Trigger: AGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTAT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCCAGGCCCTCTCCCTTaGAATTGTTCGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFPGPLP*NCSPLW
Trigger: CCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCACATCAGCATTGGTaGACTAGACTCTGTAAAAAT +
Preference number: 2 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKSHQHW*TRLCKN
Trigger: ATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CAA 90 bp CTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTaGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: LSTVSLNISLHSHTS*SSKASGHQNTHFLH
Trigger: GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATCACATCAGCATTGGTaGACTAGACTCTGTAAAAAT +
Preference number: 2 (lower is better)
Translates to: QLLKARGICLRMRVSKVGSHQHW*TRLCKN
Trigger: ATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CAA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACGCCAGGCCCTCTCCCTaGCAATTGTTCGCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: PPSPPGTSSALPPSECTHARPSP*QLFAPL
Trigger: CAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGC...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR GCA 72 bp CACACACAGCAGGGCCTCTGGTGGACTCACCCACATTaGTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: HTQQGLWWTHPH*SQESSGLTSFS
Trigger: AGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 72 bp CAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTaGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTA +
Preference number: 3 (lower is better)
Translates to: QPGPLPCNCSPL*AKPKGRCSVQV
Trigger: TACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 72 bp ACACTGCCTCGAGGGCTGGGGAAGACTAAAATTTATTaGCCACACACAGCAGGGCCTCTGGTGGACTCACCC +
Preference number: 3 (lower is better)
Translates to: TLPRGLGKTKIY*PHTAGPLVDSP
Trigger: GGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGGCCAATAAATTTTAGTCTTCCCCAGCCCTCGAGGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CAA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGCCAGGCCCTCTCCCTaGCAATTGTTCGCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGARPSP*QLFAPL
Trigger: CAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 72 bp AGACTAAAATTTATTGGCCACACACAGCAGGGCCTCTaGTGGACTCACCCACATTGCTCCCAGGAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: RLKFIGHTQQGL*WTHPHCSQESS
Trigger: ACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGGCCAATAAATTTTAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CAA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTACCCTCTCCCTTGCAATaGTTCGCCCCTCTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVPSPLQ*FAPLGQ
Trigger: TTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGG...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CAA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCCCCTCTCCCTTGCAATaGTTCGCCCCTCTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSPSPLQ*FAPLGQ
Trigger: TTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGG...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 72 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTaGCATGGCTTAGAGTTCCTAATAACAAGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: QNLHGPRGGTVF*HGLEFLITRVN
Trigger: ATTAACCCTTGTTATTAGGAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR TCA 72 bp TATGCAGCAAACACCCTTACAAGTCTATCCGCAACCTaGTCACGCAAGAAAGGATTCATCACACAGTCGCCA +
Preference number: 3 (lower is better)
Translates to: YAANTLTSLSAT*SRKKGFITQSP
Trigger: TGGCGACTGTGTGATGAATCCTTTCTTGCGTGATCAGGTTGCGGATAGACTTGTAAGGGTGTTTGCTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
3UTR-3UTR CAA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGACACTCTCACACATCCTaGTCCAGTAAAGCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: QLLKARGICLRMRVSKVGHSHTS*SSKASG
Trigger: GCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTG...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CCA 72 bp AAGAGGGTGGAGATAAGAACACCAAACACTTTTAGCTaGAGTTATTTATCACTGCAAGGGGCTAGGGACCCA +
Preference number: 3 (lower is better)
Translates to: KRVEIRTPNTFS*SYLSLQGARDP
Trigger: TGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTGTTCTTATCTCCACCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR-3UTR CAA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACATTTATACAAGGCAGGTaGTGGCAGGACACTAGGGGT +
Preference number: 3 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTFIQGR*WQDTRG
Trigger: ACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAA...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252512.14
3UTR GCA 72 bp TTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATaGAGCAAACACCCTTACAAGTCTATCCGCAACCTG +
Preference number: 3 (lower is better)
Translates to: LKFIGGHNAYTV*SKHPYKSIRNL
Trigger: CAGGTTGCGGATAGACTTGTAAGGGTGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
3UTR-3UTR CAA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTGGCTGGAGTCTCAGTTaGTATCTCTTATCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: PHISIGALDSVKIFQSHFGWSLS*YLLSPP
Trigger: GGGAGGAGATAAGAGATACAAACTGAGACTCCAGCC...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACATACGGCACAGAGGCTaGCAGCCGCTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHIRHRG*QPLPQA
Trigger: AGCCTGTGGCAGCGGCTGGCAGCCTCTGTGCCGTAT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGAACCAGCAGCGCCCTaGCCCCTAGTGAGTGTACTC +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVEPAAP*PLVSVL
Trigger: GAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTC...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACAGGTATGTCACAATGTaGTCCAGGCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHRYVTM*SRQEQQ
Trigger: CTGCTGCTCCTGCCTGGACCACATTGTGACATACCT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGAAGCGGTCGCTCTCCTaGTTCAGGGGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVKRSLS*FRGVVL
Trigger: GAGGACCACACCCCTGAACCAGGAGAGCGACCGCTT...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CAA 72 bp CCACACACAGCAGGGCCTCTGGTGGACTCACCCACATaGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHTAGPLVDSPT*LPGEQWAHFLL
Trigger: GAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACCTGACAGGTTCTGGGTaGACCTGTCTCTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHLTGSG*TCLCFS
Trigger: CGAAAAACAGAGACAGGTTCACCCAGAACCTGTCAG...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTAGGTGCATGGCCTGCTaGTTCTCCGGTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSRCMAC*FSGGWL
Trigger: CAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCT...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACATTCACAACGCCCAATaGTGGACAGCTGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHIHNAQ*WTAGPT
Trigger: AGTTGGACCAGCTGTCCACCATTGGGCGTTGTGAAT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACCAATGGACAGGTCATTaGGAAGCTGTAGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHQWTGH*EAVVSW
Trigger: CCAAGACACTACAGCTTCTCAATGACCTGTCCATTG...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCTTCTCGACGGAATGCTaGCAGGTTCTGGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTFSTEC*QVLGEP
Trigger: AGGTTCACCCAGAACCTGTCAGCATTCCGTCGAGAA...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGGAGCAAATTCCCAGTaGTGTAGGCTGGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTGANSQ*CRLVTV
Trigger: CACAGTGACCAGCCTACAGCACTGGGAATTTGCTCC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCCACAGCCTCAAATaGTGCTGTGAGTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVGHSLK*CCEWQH
Trigger: ATGCTGCCACTCACAGCAGCATTTGAGGCTGTGGCC...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACCAGGCCCTCTCCCTTaGAATTGTTCGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVPGPLP*NCSPLW
Trigger: CCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACTGGTCCAACTGCTGCTaGACCAGCCCCGTATCCTCC +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYWSNCC*TSPVSS
Trigger: GGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCA...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGTACGACTGGGCCGACTaGTCAAACAACTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVYDWAD*SNNCTR
Trigger: CCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTA...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTCCATTGGGCTTGCGCTaGCGCTCTGTAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSPLGLR*RSVAAP
Trigger: AGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGG...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACAGACGCTTAGGACCATaGTCTCATCATTCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHRRLGP*SHHSSP
Trigger: TGGGCTTGAATGATGAGACCATGGTCCTAAGCGTCT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGAGCAGCCTTCAGCATaGAGAAGCAGATGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTEQPSA*RSRWRC
Trigger: GCATCTCCATCTGCTTCTCCATGCTGAAGGCTGCTC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGAATTGTTCGCCCCTCTaGGCCAAACCAAAGGGACGC +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGNCSPL*AKPKGR
Trigger: GCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATT...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGAATTGTTCGCCCCTCTaGGCCAAACCAAAGGGACGC +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVNCSPL*AKPKGR
Trigger: GCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATT...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTTTCTCCCCACTTGGGTaGCCCCAGGAGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVFSPLG*PQEERL
Trigger: CAGCCTCTCCTCCTGGGGCCACCCAAGTGGGGAGAA...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCTGTACACAGGTCGTCTaGGGACTCATCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTCTQVV*GLISGS
Trigger: ACTTCCACTGATGAGTCCTCAGACGACCTGTGTACA...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCTCCAAGAGATCACTGTaGGGAATAGAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTSKRSL*GIERSS
Trigger: GCTGCTCCTCTCTATTCCTCACAGTGATCTCTTGGA...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGTTCTCGACGGAATGCTaGCAGGTTCTGGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVFSTEC*QVLGEP
Trigger: AGGTTCACCCAGAACCTGTCAGCATTCCGTCGAGAA...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAAGCTGGTCCAACTGCTaGTGGACCAGCCCCGTATCC +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRSWSNC*WTSPVS
Trigger: GGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCT...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACATCATCTCTGGATGCTaGTGCATGATGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPSPPGTSSALPPSECTHIISGC*CMMCRK
Trigger: CTTTCTGCACATCATGCAGCAGCATCCAGAGATGAT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGTTAGGTTCATCAGCTaGAGCACCCGACAGACAAGC +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVVRFIS*STRQTS
Trigger: GCTTGTCTGTCGGGTGCTCCAGCTGATGAACCTAAC...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGTACAGGCTGGATCATaGTACCAGAGCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTVQAGS*YQSSIA
Trigger: GGCAATTGAGCTCTGGTACCATGATCCAGCCTGTAC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCCTGCTGGATCATCTCTaGATGCTGCTGCATGATGTG +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTLLDHL*MLLHDV
Trigger: CACATCATGCAGCAGCATCCAGAGATGATCCAGCAG...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGGTAGGCTGGTCACTGTaGAGTTGGCTATCAATCGGA +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGVGWSL*SWLSIG
Trigger: TCCGATTGATAGCCAACTTCACAGTGACCAGCCTAC...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGGGCCATCTCTCAGTATaGTGTGCACAGATTCCAACC +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGGHLSV*CAQIPT
Trigger: GGTTGGAATCTGTGCACATCATACTGAGAGATGGCC...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACCTCCTAAATCCACCATaGGGAGACGCCCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYLLNPP*GDAQVL
Trigger: CAGCACTTGGGCGTCTCCTCATGGTGGATTTAGGAG...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGCCATCCATGGCGTCTTaGTCATCAGTGCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGPSMAS*SSVLAK
Trigger: TTTTGCCAGCACTGATGAGCAAGACGCCATGGATGG...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGTACCAGAGCTCAATTaGCCGTTGGAGAATTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTVPELN*PLENWH
Trigger: ATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTAC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTATGCTGCTGCATGATGTaGAGAAAGCGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVCCCMM*RKRSLS
Trigger: GGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCA...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGATCTCTGGATGCTGCTaGATGATGTGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGISGCC*MMCRKR
Trigger: CCGCTTTCTGCACATCATGCAGCAGCATCCAGAGAT...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGKPKGR*SVQVES
Trigger: GGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTT...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGCTGATCTCCAGCTGGTaGGAATCTGCACTGTACACA +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVLISSW*ESALYT
Trigger: TGTGTACAGTGCAGATTCCCACCAGCTGGAGATCAG...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCCCAATGGTGGACAGCTaGTCCAACTGCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFPMVDS*SNCCWT
Trigger: GGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGG...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGACACTGCAATGTCCATTaGGCTTGCGCTGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRHCNVH*ACAGAL
Trigger: CAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTG...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAACACAGCAGGGCCTCTaGTGGACTCACCCACATTGC +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRTQQGL*WTHPHC
Trigger: GCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGT...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCGCCAGGCTCTGCACATaGTCCGCCATTTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFARLCT*SAILLH
Trigger: ATGGAGCAAAATGGCGGATCATGTGCAGAGCCTGGC...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGGGGGCTCTGTGGCTTTaGCATACGGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEGALWL*HTAQRL
Trigger: CAGCCTCTGTGCCGTATGTCAAAGCCACAGAGCCCC...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGCATGATCCGCCATTTTaGTCCATTCATGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGHDPPF*SIHAPL
Trigger: GAGAGGAGCATGAATGGAGCAAAATGGCGGATCATG...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGAGCTGGTCCAACTGCTaGTGGACCAGCCCCGTATCC +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVESWSNC*WTSPVS
Trigger: GGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCT...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACGTCTTGCTCATCAGTaGTGGCAAAAGAAACCCGGC +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVRLAHQ*WQKKPG
Trigger: GCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACACCGTGGACAGCATCTaGTGGATCATCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYTVDSI*WIISGC
Trigger: GCATCCAGAGATGATCCAGCAGATGCTGTCCACGGT...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGAAGATTTCGCTCGATaGCTTCCATCAGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTEDFAR*LPSGSQ
Trigger: TTGAGAACCTGATGGAAGGCATCGAGCGAAATCTTC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTAGGCTGATCTCCAGCTaGTGGGAATCTGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSRLISS*WESALY
Trigger: GTACAGTGCAGATTCCCACCAGCTGGAGATCAGCCT...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTTACGACTGGGCCGACTaGTCAAACAACTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVYDWAD*SNNCTR
Trigger: CCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTA...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGTTAGGTTCATCAGCTaGAGCACCCGACAGACAAGC +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSVRFIS*STRQTS
Trigger: GCTTGTCTGTCGGGTGCTCCAGCTGATGAACCTAAC...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTATGTCACAATGTaGTCCAGGCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYRYVTM*SRQEQQ
Trigger: CTGCTGCTCCTGCCTGGACCACATTGTGACATACCT...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACTGCTGCTTCTCCGGTaGCTGGCTGTTCACAATACT +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVLLLLR*LAVHNT
Trigger: AGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGGAGGGACGGTGTTCTaGCATGGCTTAGAGTTCCTA +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSGGTVF*HGLEFL
Trigger: TAGGAACTCTAAGCCATGCCAGAACACCGTCCCTCC...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGGGGCTCTGTGGCTTTaGCATACGGCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHGALWL*HTAQRL
Trigger: CAGCCTCTGTGCCGTATGTCAAAGCCACAGAGCCCC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTAAGATGGAGATGCCCTTaGGCTTCAGAGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVRWRCP*ASEHRP
Trigger: AGGTCTATGCTCTGAAGCTCAAGGGCATCTCCATCT...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGATACGGCACAGAGGCTaGCAGCCGCTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQIRHRG*QPLPQA
Trigger: AGCCTGTGGCAGCGGCTGGCAGCCTCTGTGCCGTAT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAAGGAGCAGCAGCCTGTaGATACCATGGTGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRRSSSL*IPWCQV
Trigger: CACTTGACACCATGGTATGCACAGGCTGCTGCTCCT...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGAACCAGCAGCGCCCTaGCCCCTAGTGAGTGTACTC +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGEPAAP*PLVSVL
Trigger: GAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTAGGCTGATCTCCAGCTaGTGGGAATCTGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVRLISS*WESALY
Trigger: GTACAGTGCAGATTCCCACCAGCTGGAGATCAGCCT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTCCAATGGTGGACAGCTaGTCCAACTGCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGPMVDS*SNCCWT
Trigger: GGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGG...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCCTTGCTCATCAGTGCTaGCAAAAGAAACCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFLAHQC*QKKPGH
Trigger: GTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAG...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTATGTCTTGGAGGTGATTaGTTCACAACGGCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVCLGGD*FTTAPV
Trigger: TACTGGGGCCGTTGTGAACCAATCACCTCCAAGACA...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCCTGCTGCTTCTCCGGTaGCTGGCTGTTCACAATACT +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFLLLLR*LAVHNT
Trigger: AGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAG...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGACCAGCCCAGTTTTGTaGTTCTGGCATATAACTGAA +
Preference number: 4 (lower is better)
Translates to: THSRASGGLTHIAPRRAVTSPVL*FWHITE
Trigger: TTCAGTTATATGCCAGAATCACAAAACTGGGCTGGT...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGACAGGGATCTTCTGACTaGAGCGATCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRQGSSD*SDLYQA
Trigger: TGCTTGGTACAGATCGCTTCAGTCAGAAGATCCCTG...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCAGGGATCTTCTGACTaGAGCGATCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVQGSSD*SDLYQA
Trigger: TGCTTGGTACAGATCGCTTCAGTCAGAAGATCCCTG...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTATGGCTATCAATCGGATaGCCTCAGGGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVWLSIG*PQGSFP
Trigger: TGGAAAACTACCCTGAGGTCATCCGATTGATAGCCA...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGGTAGTGTCTTGGAGGTaGTTGGTTCACAACGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEVVSWR*LVHNGP
Trigger: GGGGCCGTTGTGAACCAATCACCTCCAAGACACTAC...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTCAATGGACAGGTCATTaGGAAGCTGTAGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSQWTGH*EAVVSW
Trigger: CCAAGACACTACAGCTTCTCAATGACCTGTCCATTG...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTAAGTGCTCGCTCGTGTaGTTGTTCAGCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSKCSLV*LFSMNC
Trigger: ACAGTTCATGCTGAACAATCACACGAGCGAGCACTT...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGGTTAATACCCAAAAATaGAAAGTGCTCGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGVNTQK*KVLARV
Trigger: CACACGAGCGAGCACTTTTCATTTTTGGGTATTAAC...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTAGATGGAGATGCCCTTaGGCTTCAGAGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVRWRCP*ASEHRP
Trigger: AGGTCTATGCTCTGAAGCTCAAGGGCATCTCCATCT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAACTGCACGAGGAGTaGACACGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVQLHEE*TRLLIF
Trigger: GAATATGAGAAGACGTGTGCACTCCTCGTGCAGTTG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTCCTTCCCTCCTGCACTaGAATGTCCATTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGPSLLH*NVHWAC
Trigger: GCAAGCCCAATGGACATTGCAGTGCAGGAGGGAAGG...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTGGAGTTATTTATCACTaGAAGGGGCTAGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVGVIYH*KGLGTQ
Trigger: CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCC...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGACTGCCTGGAGTCGAGTaGTTGTGTCTGTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRLPGVE*LCLWFH
Trigger: ATGAAACCACAGACACAACCACTCGACTCCAGGCAG...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGCTCTGTAGCAGCTCCTaGTACGACTGGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQLCSSS*YDWADW
Trigger: CCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAG...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGATGTCTTGGAGGTGATTaGTTCACAACGGCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRCLGGD*FTTAPV
Trigger: TACTGGGGCCGTTGTGAACCAATCACCTCCAAGACA...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAATACAAGGCAGGTTGTaGCAGGACACTAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRIQGRL*QDTRGS
Trigger: AGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTAT...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGGAGTAGCTGGCACTTaGTCAGGCAATCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGGVAGT*SGNQGC
Trigger: ACAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTATCTCTCAGTATGATGTaGACAGATTCCAACCGGGAT +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVSLSMM*TDSNRD
Trigger: ATCCCGGTTGGAATCTGTGCACATCATACTGAGAGA...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGTCAGCCTTCCCTCCTaGACTGCAATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHVSLPS*TAMSIG
Trigger: CCCAATGGACATTGCAGTGCAGGAGGGAAGGCTGAC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTCGTCTTGCTCATCAGTaGTGGCAAAAGAAACCCGGC +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGRLAHQ*WQKKPG
Trigger: GCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACG...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGAGGAGACGCCCAAGTaGTGTGTAGAAGGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGEETPK*CVEGSP
Trigger: CGGACTACCTTCTACACAGCACTTGGGCGTCTCCTC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCACATTGTTATCATCTTaGTGGTTTCTCGGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTTLLSS*WFLGRV
Trigger: TACTCTTCCGAGAAACCAGCAAGATGATAACAATGT...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAGTGCTACGTGACAGCTaGTTGAAGAGGTATGTCACA +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRVLRDS*LKRYVT
Trigger: TGTGACATACCTCTTCAAGCAGCTGTCACGTAGCAC...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACCACAGGTGCATGGCCTaGTGCTTCTCCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHHRCMA*CFSGGW
Trigger: CCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTG...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTGAAGAGACATCAAACTaGAGTCGCTGGGACCTATTA +
Preference number: 4 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSEETSN*SRWDLL
Trigger: TAATAGGTCCCAGCGACTCCAGTTTGATGTCTCTTC...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACCCTGGTTCAGGGGTGTaGTCCTCTTCTTGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHPGSGV*SSSWCY
Trigger: GTAGCACCAAGAAGAGGACCACACCCCTGAACCAGG...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCTATTCACGCCATAAGTaGAATTCTTCATTGAGTCGT +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTYSRHK*NSSLSR
Trigger: ACGACTCAATGAAGAATTCCACTTATGGCGTGAATA...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTAGACGGTGTTCTGGCATaGCTTAGAGTTCCTAATAAC +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVDGVLA*LRVPNN
Trigger: GTTATTAGGAACTCTAAGCCATGCCAGAACACCGTC...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGGGGGTTGTTTGTGCGTaGTACAAGCTTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEGVVCA*YKLGKA
Trigger: TGCCTTACCAAGCTTGTATCACGCACAAACAACCCC...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAATAATAAGACTGGCTaGGCTTGGGGTAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYNNKTG*AWGNPR
Trigger: TCTTGGATTACCCCAAGCTCAGCCAGTCTTATTATT...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGACAGCTGGTCCAACTaGTGCTGGACCAGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRDSWSN*CWTSPV
Trigger: TACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACTCCTAGTGTCAGGATaGGATTGCCATACATTGTTA +
Preference number: 4 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVLLVSG*DCHTLL
Trigger: TAACAATGTATGGCAATCGCATCCTGACACTAGGAG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAGGTGCATGGCCTGCTaGTTCTCCGGTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGRCMAC*FSGGWL
Trigger: CAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCT...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGTTCTCAAAACACAGGTaGATGGCCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEFSKHR*MACCFS
Trigger: GGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAA...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCGAGTGGTTGTGTCTGTaGTTTCATACAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFEWLCL*FHTAVC
Trigger: GCAAACAGCTGTATGAAACCACAGACACAACCACTC...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCTCTGTAGCAGCTCCTaGTACGACTGGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQLCSSS*YDWADW
Trigger: CCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCAAGTTCATATGGTCCTaGGTCAGGACTTCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFKFIWS*VRTSSS
Trigger: ACTACTGGAAGTCCTGACCCAGGACCATATGAACTT...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAGCAATAAAGTTCATATaGTCCTGGGTCAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRAIKFI*SWVRTS
Trigger: GGAAGTCCTGACCCAGGACCATATGAACTTTATTGC...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCGCAATAAAGTTCATATaGTCCTGGGTCAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFAIKFI*SWVRTS
Trigger: GGAAGTCCTGACCCAGGACCATATGAACTTTATTGC...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGTGTGGTCCTCTTCTTaGTGCTACGTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHVWSSS*CYVTAA
Trigger: AGCAGCTGTCACGTAGCACCAAGAAGAGGACCACAC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACAAGCGGTCGCTCTCCTaGTTCAGGGGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHKRSLS*FRGVVL
Trigger: GAGGACCACACCCCTGAACCAGGAGAGCGACCGCTT...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTGGAATTGATCATTTCTaGGTGAGGACAGGGCAATAC +
Preference number: 4 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVGIDHF*VRTGQY
Trigger: GTATTGCCCTGTCCTCACCCAGAAATGATCAATTCC...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCCCAAACACTTTTAGCTaGAGTTATTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTPNTFS*SYLSLQ
Trigger: TTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGG...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGACACTGCCTCGAGGGCTaGGGAAGACTAAAATTTATT +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRHCLEG*GRLKFI
Trigger: AATAAATTTTAGTCTTCCCCAGCCCTCGAGGCAGTG...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCCTTCTTGGTGCTACGTaGCAGCTGCTTGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGLLGAT*QLLEEV
Trigger: TACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAG...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGATGGGTGGTGTCTaGTTGATTAATTTCATTGGT +
Preference number: 4 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYRMGGV*LINFIG
Trigger: ACCAATGAAATTAATCAAGCAGACACCACCCATCCT...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCGAGGCTATTTTTCTGTaGTTGGTTAAAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFEAIFL*LVKGWV
Trigger: CACCCATCCTTTAACCAAGCACAGAAAAATAGCCTC...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAGGAGCAAATTCCCAGTaGTGTAGGCTGGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKGANSQ*CRLVTV
Trigger: CACAGTGACCAGCCTACAGCACTGGGAATTTGCTCC...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGCAACTGCACGAGGAGTaGACACGTCTTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEQLHEE*TRLLIF
Trigger: GAATATGAGAAGACGTGTGCACTCCTCGTGCAGTTG...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGCTCGGAAGAGTAAGATaGCATTGGGGGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVELGRVR*HWGKRH
Trigger: ATGTCTCTTCCCCCAATGGCATCTTACTCTTCCGAG...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGACTCCTAGTGTCAGGATaGGATTGCCATACATTGTTA +
Preference number: 4 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRLLVSG*DCHTLL
Trigger: TAACAATGTATGGCAATCGCATCCTGACACTAGGAG...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGACCGTGGACAGCATCTaGTGGATCATCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQTVDSI*WIISGC
Trigger: GCATCCAGAGATGATCCAGCAGATGCTGTCCACGGT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHKPKGR*SVQVES
Trigger: GGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATGGACTCACCCACATTaGTCCCAGGAGAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVWTHPH*SQESSG
Trigger: CCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACAAGGCTTTCTCTGCCTaGAGTCGAGTGGTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHKAFSA*SRVVVS
Trigger: AGACACAACCACTCGACTCCAGGCAGAGAAAGCCTT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGTACAGGCTGGATCATaGTACCAGAGCTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHVQAGS*YQSSIA
Trigger: GGCAATTGAGCTCTGGTACCATGATCCAGCCTGTAC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGAGCAGCCTTCAGCATaGAGAAGCAGATGGAGATGC +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQEQPSA*RSRWRC
Trigger: GCATCTCCATCTGCTTCTCCATGCTGAAGGCTGCTC...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAGGAGGGACGGTGTTCTaGCATGGCTTAGAGTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKGGTVF*HGLEFL
Trigger: TAGGAACTCTAAGCCATGCCAGAACACCGTCCCTCC...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACTTGATGAGTGTCCCGTaGGCAAGAGCTGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHLMSVP*ARAELE
Trigger: CTCTAGTTCAGCTCTTGCCCACGGGACACTCATCAA...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCATGAGCAAGCCATGCTaGCTTTCATCATTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFMSKPC*LSSFKF
Trigger: AAACTTGAATGATGAAAGTCAGCATGGCTTGCTCAT...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACCAAGCCCAGAACTTCTaGGAGTCGGCGGTACAGCTT +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHQAQNF*ESAVQL
Trigger: AAGCTGTACCGCCGACTCTCAGAAGTTCTGGGCTTG...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGTACGTGACAGCTGCTTaGAGAGGTATGTCACAATGT +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVEYVTAA*RGMSQC
Trigger: ACATTGTGACATACCTCTTCAAGCAGCTGTCACGTA...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGACTGGATGCTGCTGCATaGTGTGCAGAAAGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGLDAAA*CAESGR
Trigger: GCGACCGCTTTCTGCACATCATGCAGCAGCATCCAG...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAACTGACAGGTTCTGGGTaGACCTGTCTCTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLTGSG*TCLCFS
Trigger: CGAAAAACAGAGACAGGTTCACCCAGAACCTGTCAG...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTAGTGGAATTCTTCATTaGGTCGTTGACTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGSGILH*VVDFST
Trigger: CGTCGAGAAGTCAACGACTCAATGAAGAATTCCACT...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAAACCAAGGCTTTCTCTaGCTGGAGTCGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKNQGFL*LESSGC
Trigger: ACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTT...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAGACAGCTGGTCCAACTaGTGCTGGACCAGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTDSWSN*CWTSPV
Trigger: TACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTC...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTCAGCCTTCCCTCCTaGACTGCAATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRVSLPS*TAMSIG
Trigger: CCCAATGGACATTGCAGTGCAGGAGGGAAGGCTGAC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGCCGGCCACCGATCACTaGTCCAATAATGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQPATDH*SNNVNQ
Trigger: CTGGTTTACATTATTGGAGCAGTGATCGGTGGCCGG...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGGAGGAGACGCCCAAGTaGTGTGTAGAAGGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSREETPK*CVEGSP
Trigger: CGGACTACCTTCTACACAGCACTTGGGCGTCTCCTC...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGGGCCACAGCCTCAAATaGTGCTGTGAGTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQGHSLK*CCEWQH
Trigger: ATGCTGCCACTCACAGCAGCATTTGAGGCTGTGGCC...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCCTCGGAAGAGTAAGATaGCATTGGGGGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGLGRVR*HWGKRH
Trigger: ATGTCTCTTCCCCCAATGGCATCTTACTCTTCCGAG...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGTGCTGCTGCATGATGTaGAGAAAGCGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRCCCMM*RKRSLS
Trigger: GGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCA...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTCACAGGTGCATGGCCTaGTGCTTCTCCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFHRCMA*CFSGGW
Trigger: CCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTG...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTTCTCAAAACACAGGTaGATGGCCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQFSKHR*MACCFS
Trigger: GGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACACCAGGCCCTCTCCCTTaGAATTGTTCGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTPGPLP*NCSPLW
Trigger: CCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGG...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATGGACTCACCCACATTaGTCCCAGGAGAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGWTHPH*SQESSG
Trigger: CCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAACTTTCGAGGAGTAGCTaGCACTTGCTCAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLSRSS*HLLRQS
Trigger: TGATTGCCTGAGCAAGTGCCAGCTACTCCTCGAAAG...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAACTGATCTCCAGCTGGTaGGAATCTGCACTGTACACA +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLISSW*ESALYT
Trigger: TGTGTACAGTGCAGATTCCCACCAGCTGGAGATCAG...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCTGGTCCAACTGCTGCTaGACCAGCCCCGTATCCTCC +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSWSNCC*TSPVSS
Trigger: GGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCA...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACAGCTCCTGGTACGACTaGGCCGACTGGTCAAACAAC +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHSSWYD*ADWSNN
Trigger: GTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCT...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAGCTCCTGGTACGACTaGGCCGACTGGTCAAACAAC +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRSSWYD*ADWSNN
Trigger: GTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCT...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAACTGCTGGATCATCTCTaGATGCTGCTGCATGATGTG +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLLDHL*MLLHDV
Trigger: CACATCATGCAGCAGCATCCAGAGATGATCCAGCAG...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACCAAAACACAGGTGCATaGCCTGCTGCTTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHQNTGA*PAASPV
Trigger: CACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTG...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCAAAACACAGGTGCATaGCCTGCTGCTTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQQNTGA*PAASPV
Trigger: CACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCTCCCAGGAGAGCAGTaGGCTCACTTCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQLPGEQ*AHFLLS
Trigger: AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGCTCCCAGGAGAGCAGTaGGCTCACTTCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRLPGEQ*AHFLLS
Trigger: AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAG...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGAGCTGGTCTTGGCATTaGAAGCGAAAGCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQSWSWH*KRKRSL
Trigger: GAGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAGGAGTAGCTGGCACTTaGTCAGGCAATCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGGVAGT*SGNQGC
Trigger: ACAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCC...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGTTCGCTTTGCCTCCTaGTCGTTGAAACTATTGGTG +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQVRFAS*SLKLLV
Trigger: CACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAAC...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAGTGCTACGTGACAGCTaGTTGAAGAGGTATGTCACA +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKVLRDS*LKRYVT
Trigger: TGTGACATACCTCTTCAAGCAGCTGTCACGTAGCAC...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACCTTGCTCATCAGTGCTaGCAAAAGAAACCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHLAHQC*QKKPGH
Trigger: GTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAG...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATTCTCATTACCCGCCTaGGCCAAACGAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKFSLPA*AKRESV
Trigger: AACAGATTCTCGTTTGGCCCAGGCGGGTAATGAGAA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGGTGGACAGCATCTGCTaGATCATCTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQVDSIC*IISGCC
Trigger: GCAGCATCCAGAGATGATCCAGCAGATGCTGTCCAC...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAGTGGACAGCATCTGCTaGATCATCTCTGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVVDSIC*IISGCC
Trigger: GCAGCATCCAGAGATGATCCAGCAGATGCTGTCCAC...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATGCTTCTCCGGTGGCTaGCTGTTCACAATACTGTTT +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKCFSGG*LFTILF
Trigger: AAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCACAGATTCTCTAGTTaGGCCAGGCTCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQHRFSS*ARLFLP
Trigger: AGGGAGGAAGAGCCTGGCCCAACTAGAGAATCTGTG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433566.8
CDS-3UTR TCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGGGGTTGTTTGTGCGTaGTACAAGCTTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRGVVCA*YKLGKA
Trigger: TGCCTTACCAAGCTTGTATCACGCACAAACAACCCC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATGTACACAGGTCGTCTaGGGACTCATCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVCTQVV*GLISGS
Trigger: ACTTCCACTGATGAGTCCTCAGACGACCTGTGTACA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGGTAGGCTGGTCACTGTaGAGTTGGCTATCAATCGGA +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQVGWSL*SWLSIG
Trigger: TCCGATTGATAGCCAACTTCACAGTGACCAGCCTAC...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGGCCATCTCTCAGTATaGTGTGCACAGATTCCAACC +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRGHLSV*CAQIPT
Trigger: GGTTGGAATCTGTGCACATCATACTGAGAGATGGCC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCCAAGCCCAGAACTTCTaGGAGTCGGCGGTACAGCTT +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSQAQNF*ESAVQL
Trigger: AAGCTGTACCGCCGACTCTCAGAAGTTCTGGGCTTG...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAGTAGTGTCTTGGAGGTaGTTGGTTCACAACGGCCCC +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTVVSWR*LVHNGP
Trigger: GGGGCCGTTGTGAACCAATCACCTCCAAGACACTAC...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTACGTGACAGCTGCTTaGAGAGGTATGTCACAATGT +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQYVTAA*RGMSQC
Trigger: ACATTGTGACATACCTCTTCAAGCAGCTGTCACGTA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTACTTCTTGGTGCTACGTaGCAGCTGCTTGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVLLGAT*QLLEEV
Trigger: TACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAG...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTCTGGATGCTGCTGCATaGTGTGCAGAAAGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFLDAAA*CAESGR
Trigger: GCGACCGCTTTCTGCACATCATGCAGCAGCATCCAG...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTTGATCATTTCTGGGTaGGGACAGGGCAATACGAAA +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQLIISG*GQGNTK
Trigger: TTTCGTATTGCCCTGTCCTCACCCAGAAATGATCAA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATTGATCATTTCTGGGTaGGGACAGGGCAATACGAAA +
Preference number: 4 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLIISG*GQGNTK
Trigger: TTTCGTATTGCCCTGTCCTCACCCAGAAATGATCAA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACAACCAAGGCTTTCTCTaGCTGGAGTCGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHNQGFL*LESSGC
Trigger: ACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTT...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTTGTGACGTCTGTGATTaGATTTCTGAAGACATAGTC +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGCDVCD*ISEDIV
Trigger: GACTATGTCTTCAGAAATGCAATCACAGACGTCACA...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCCGGCCACCGATCACTaGTCCAATAATGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQPATDH*SNNVNQ
Trigger: CTGGTTTACATTATTGGAGCAGTGATCGGTGGCCGG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGCACAGCCTCAAATGCTaGTGTGAGTGGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQHSLKC*CEWQHE
Trigger: TTCATGCTGCCACTCACAGCAGCATTTGAGGCTGTG...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGAGCTTGATGAAGGTCTaGAGAGCATTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQSLMKV*RALSRA
Trigger: TGCCCTGGACAATGCTCTGCAGACCTTCATCAAGCT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAGGAGCAGCAGCCTGTaGATACCATGGTGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGRSSSL*IPWCQV
Trigger: CACTTGACACCATGGTATGCACAGGCTGCTGCTCCT...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATCTCTGGATGCTGCTaGATGATGTGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRISGCC*MMCRKR
Trigger: CCGCTTTCTGCACATCATGCAGCAGCATCCAGAGAT...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGAATGCTTACACTGTATaGAGCAAACACCCTTACAAG +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVENAYTV*SKHPYK
Trigger: CTTGTAAGGGTGTTTGCTGCATACAGTGTAAGCATT...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCTATTGGCGGTCACAATaGTTACACTGTATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGYWRSQ*LHCMQQ
Trigger: TTGCTGCATACAGTGTAAGCATTGTGACCGCCAATA...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR CCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACACACAACGCCCAATGGTaGACAGCTGGTCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTHNAQW*TAGPTA
Trigger: AGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTG...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR CCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCCACAACGCCCAATGGTaGACAGCTGGTCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSHNAQW*TAGPTA
Trigger: AGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTG...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGATTCACAACGCCCAATaGTGGACAGCTGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRIHNAQ*WTAGPT
Trigger: AGTTGGACCAGCTGTCCACCATTGGGCGTTGTGAAT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACACCATTGGGCTTGCGCTaGCGCTCTGTAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTPLGLR*RSVAAP
Trigger: AGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGG...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGAGGTGTAGTACAGGCTaGATCATGGTACCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQRCSTG*IMVPEL
Trigger: GAGCTCTGGTACCATGATCCAGCCTGTACTACACCT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACAGAGTAAGATGCCATTaGGGGAAGAGACATCAAACT +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHRVRCH*GKRHQT
Trigger: AGTTTGATGTCTCTTCCCCCAATGGCATCTTACTCT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAATACAAGGCAGGTTGTaGCAGGACACTAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVIQGRL*QDTRGS
Trigger: AGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTAT...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTACACAGCAGGGCCTCTaGTGGACTCACCCACATTGC +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFTQQGL*WTHPHC
Trigger: GCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCAAGACTAAAATTTATTaGCCACACACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGKTKIY*PHTAGP
Trigger: AGGCCCTGCTGTGTGTGGCCAATAAATTTTAGTCTT...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGACCAGCCCAGTTTTGTaGTTCTGGCATATAACTGAA +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQTSPVL*FWHITE
Trigger: TTCAGTTATATGCCAGAATCACAAAACTGGGCTGGT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTTCTGTCAGGTTGGACTaGTTGTTAATACCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGSVRLD*LLIPKN
Trigger: ATTTTTGGGTATTAACAATCAGTCCAACCTGACAGA...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGCGCTGGGACCTATTATaGACCAATTCAGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRRWDLL*TNSAIN
Trigger: GTTGATGGCTGAATTGGTTCATAATAGGTCCCAGCG...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATCTTCATTGAGTCGTTaGCTTCTCGACGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVSSLSR*LLDGML
Trigger: CAGCATTCCGTCGAGAAGTCAACGACTCAATGAAGA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCCCCGTGGGCAAGAGCTaGACTAGAGATGTGTACAAC +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSPVGKS*TRDVYN
Trigger: GTTGTACACATCTCTAGTTCAGCTCTTGCCCACGGG...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAAGTCTATCCGCAACCTaGTCACGCAAGAAAGGATTC +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVSLSAT*SRKKGF
Trigger: GAATCCTTTCTTGCGTGATCAGGTTGCGGATAGACT...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACTTTCATACAGCTGTTTaGACAGATTCTCTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHFHTAV*TDSLVG
Trigger: CCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAA...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGAAACTTGGCCCTCTCTaGATTGTTAAACAGGGATCT +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQKLGPL*IVKQGS
Trigger: AGATCCCTGTTTAACAATGCAGAGAGGGCCAAGTTT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAGACTGGTCAAACAACTaGACGAGGAGTGCACACGTC +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTDWSNN*TRSAHV
Trigger: GACGTGTGCACTCCTCGTGCAGTTGTTTGACCAGTC...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCGACTGGTCAAACAACTaGACGAGGAGTGCACACGTC +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSDWSNN*TRSAHV
Trigger: GACGTGTGCACTCCTCGTGCAGTTGTTTGACCAGTC...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAGTTCGCTTTGCCTCCTaGTCGTTGAAACTATTGGTG +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVVRFAS*SLKLLV
Trigger: CACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAAC...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAGTACCAGAGCTCAATTaGCCGTTGGAGAATTGGCAT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVVPELN*PLENWH
Trigger: ATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTAC...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGTGTCAGGATGCGATTaGCATACATTGTTATCATCT +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGVSGCD*HTLLSS
Trigger: AGATGATAACAATGTATGGCAATCGCATCCTGACAC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACTACCATGGTGTCAAGTaGAGTAAGTCCTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHYHGVK*SKSFRN
Trigger: ATTTCTGAAGGACTTACTGCACTTGACACCATGGTA...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGTCACATCAGCATTGGTaGACTAGACTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ARGICLRMRVSKVGKRVESHQHW*TRLCKN
Trigger: ATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGTTCTCATTACCCGCCTaGGCCAAACGAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRFSLPA*AKRESV
Trigger: AACAGATTCTCGTTTGGCCCAGGCGGGTAATGAGAA...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATTGGTGCTAAACATCTaGGCCACAGCCTCAAATGCT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVLVLNI*ATASNA
Trigger: AGCATTTGAGGCTGTGGCCCAGATGTTTAGCACCAA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAGTGTGGTCCTCTTCTTaGTGCTACGTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTVWSSS*CYVTAA
Trigger: AGCAGCTGTCACGTAGCACCAAGAAGAGGACCACAC...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGGAGTGGCAAGGTAGTTaGGCACATAGTTCCGAATAT +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQEWQGS*AHSSEY
Trigger: ATATTCGGAACTATGTGCTCAACTACCTTGCCACTC...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGATTCTGGCATATAACTaGATAAGTGCTTGTGTCACG +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQILAYN*ISACVT
Trigger: CGTGACACAAGCACTTATTCAGTTATATGCCAGAAT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATGGCTATCAATCGGATaGCCTCAGGGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGWLSIG*PQGSFP
Trigger: TGGAAAACTACCCTGAGGTCATCCGATTGATAGCCA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACCAGTTCATACATTCATaGGTGCAGGGTACATATATA +
Preference number: 4 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHQFIHS*VQGTYI
Trigger: TATATATGTACCCTGCACTCATGAATGTATGAACTG...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTTTCATACAGCTGTTTaGACAGATTCTCTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQFHTAV*TDSLVG
Trigger: CCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACACCTTCCCTCCTGCACTaGAATGTCCATTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTPSLLH*NVHWAC
Trigger: GCAAGCCCAATGGACATTGCAGTGCAGGAGGGAAGG...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCACATTGTTATCATCTTaGTGGTTTCTCGGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGTLLSS*WFLGRV
Trigger: TACTCTTCCGAGAAACCAGCAAGATGATAACAATGT...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAAGCTTGATGAAGGTCTaGAGAGCATTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTSLMKV*RALSRA
Trigger: TGCCCTGGACAATGCTCTGCAGACCTTCATCAAGCT...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR GCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTACCATGGTGTCAAGTaGAGTAAGTCCTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQYHGVK*SKSFRN
Trigger: ATTTCTGAAGGACTTACTGCACTTGACACCATGGTA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGAAGATTTCGCTCGATaGCTTCCATCAGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKREDFAR*LPSGSQ
Trigger: TTGAGAACCTGATGGAAGGCATCGAGCGAAATCTTC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGGAGTGGTTGTGTCTGTaGTTTCATACAGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSREWLCL*FHTAVC
Trigger: GCAAACAGCTGTATGAAACCACAGACACAACCACTC...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCCTGCCTGGAGTCGAGTaGTTGTGTCTGTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSLPGVE*LCLWFH
Trigger: ATGAAACCACAGACACAACCACTCGACTCCAGGCAG...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCACTGCAATGTCCATTaGGCTTGCGCTGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFHCNVH*ACAGAL
Trigger: CAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGAAATGCTGCTGTGAGTaGCAGCATGAACTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQKCCCE*QHELLI
Trigger: TATGAGCAGTTCATGCTGCCACTCACAGCAGCATTT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGAAGAGACATCAAACTaGAGTCGCTGGGACCTATTA +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKREETSN*SRWDLL
Trigger: TAATAGGTCCCAGCGACTCCAGTTTGATGTCTCTTC...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACACCTGGTTCAGGGGTGTaGTCCTCTTCTTGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTPGSGV*SSSWCY
Trigger: GTAGCACCAAGAAGAGGACCACACCCCTGAACCAGG...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATGCTTCTCCGGTGGCTaGCTGTTCACAATACTGTTT +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGCFSGG*LFTILF
Trigger: AAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGCCCTCACATCAGCATTaGTGCACTAGACTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRPSHQH*CTRLCK
Trigger: TTTACAGAGTCTAGTGCACCAATGCTGATGTGAGGG...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACGTTAATACCCAAAAATaGAAAGTGCTCGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHVNTQK*KVLARV
Trigger: CACACGAGCGAGCACTTTTCATTTTTGGGTATTAAC...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCTCCTAAATCCACCATaGGGAGACGCCCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFLLNPP*GDAQVL
Trigger: CAGCACTTGGGCGTCTCCTCATGGTGGATTTAGGAG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACACGCTGGGACCTATTATaGACCAATTCAGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTRWDLL*TNSAIN
Trigger: GTTGATGGCTGAATTGGTTCATAATAGGTCCCAGCG...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTCCAAGAGATCACTGTaGGGAATAGAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFSKRSL*GIERSS
Trigger: GCTGCTCCTCTCTATTCCTCACAGTGATCTCTTGGA...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGATATACATGATGACGTaGGGTTCCAGGCTTGCAATA +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQIYMMT*GSRLAI
Trigger: TATTGCAAGCCTGGAACCTCACGTCATCATGTATAT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCTCTTCATTGAGTCGTTaGCTTCTCGACGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSSSLSR*LLDGML
Trigger: CAGCATTCCGTCGAGAAGTCAACGACTCAATGAAGA...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGCAGTTCATACATTCATaGGTGCAGGGTACATATATA +
Preference number: 4 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQQFIHS*VQGTYI
Trigger: TATATATGTACCCTGCACTCATGAATGTATGAACTG...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGGAGGCTATTTTTCTGTaGTTGGTTAAAGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSREAIFL*LVKGWV
Trigger: CACCCATCCTTTAACCAAGCACAGAAAAATAGCCTC...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGAAACTTGGCCCTCTCTaGATTGTTAAACAGGGATCT +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRKLGPL*IVKQGS
Trigger: AGATCCCTGTTTAACAATGCAGAGAGGGCCAAGTTT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTAATCGGGCCAGTAGTCTaGAAAACTCATGGTAATTGT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVIGPVV*KTHGNC
Trigger: ACAATTACCATGAGTTTTGCAGACTACTGGCCCGAT...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAATCATCTCTGGATGCTaGTGCATGATGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGIISGC*CMMCRK
Trigger: CTTTCTGCACATCATGCAGCAGCATCCAGAGATGAT...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGAGCTCATCATGTCATTaGTATTCACGCCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQSSSCH*YSRHKW
Trigger: CCACTTATGGCGTGAATAGCAATGACATGATGAGCT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTGGAGTTATTTATCACTaGAAGGGGCTAGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFGVIYH*KGLGTQ
Trigger: CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCC...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCAGACGCTTAGGACCATaGTCTCATCATTCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSRRLGP*SHHSSP
Trigger: TGGGCTTGAATGATGAGACCATGGTCCTAAGCGTCT...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAGGAATTGATCATTTCTaGGTGAGGACAGGGCAATAC +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGGIDHF*VRTGQY
Trigger: GTATTGCCCTGTCCTCACCCAGAAATGATCAATTCC...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
3UTR CAA 72 bp GTGTCACTAAATATATCTCTGCACTCTCACACATCCTaGTCCAGTAAAGCTTCAGGCCACCAGAATACACAT +
Preference number: 4 (lower is better)
Translates to: VSLNISLHSHTS*SSKASGHQNTH
Trigger: ATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGATGAGCAAGCCATGCTaGCTTTCATCATTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRMSKPC*LSSFKF
Trigger: AAACTTGAATGATGAAAGTCAGCATGGCTTGCTCAT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTAAGTGCTCGCTCGTGTaGTTGTTCAGCATGAACTGT +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFKCSLV*LFSMNC
Trigger: ACAGTTCATGCTGAACAATCACACGAGCGAGCACTT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCTCTCTCAGTATGATGTaGACAGATTCCAACCGGGAT +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSSLSMM*TDSNRD
Trigger: ATCCCGGTTGGAATCTGTGCACATCATACTGAGAGA...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACACCATCCATGGCGTCTTaGTCATCAGTGCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTPSMAS*SSVLAK
Trigger: TTTTGCCAGCACTGATGAGCAAGACGCCATGGATGG...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACAAGGTGTAGTACAGGCTaGATCATGGTACCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTRCSTG*IMVPEL
Trigger: GAGCTCTGGTACCATGATCCAGCCTGTACTACACCT...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTGAGTGGCAAGGTAGTTaGGCACATAGTTCCGAATAT +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFEWQGS*AHSSEY
Trigger: ATATTCGGAACTATGTGCTCAACTACCTTGCCACTC...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCTGGGTGGTGTCTGCTTaGTTAATTTCATTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSWVVSA*LISLVS
Trigger: GCTAACCAATGAAATTAATCAAGCAGACACCACCCA...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTAGTGGAATTCTTCATTaGGTCGTTGACTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFSGILH*VVDFST
Trigger: CGTCGAGAAGTCAACGACTCAATGAAGAATTCCACT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCACAGCCTCAAATGCTaGTGTGAGTGGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFHSLKC*CEWQHE
Trigger: TTCATGCTGCCACTCACAGCAGCATTTGAGGCTGTG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGTCACATCAGCATTGGTaGACTAGACTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: PLYCVTKYISALSHILVQSHQHW*TRLCKN
Trigger: ATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCTTTCGAGGAGTAGCTaGCACTTGCTCAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFLSRSS*HLLRQS
Trigger: TGATTGCCTGAGCAAGTGCCAGCTACTCCTCGAAAG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTAAATGCTGCTGTGAGTaGCAGCATGAACTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFKCCCE*QHELLI
Trigger: TATGAGCAGTTCATGCTGCCACTCACAGCAGCATTT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGTTGTTATCATCTTGCTaGTTTCTCGGAAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRLLSSC*FLGRVR
Trigger: TCTTACTCTTCCGAGAAACCAGCAAGATGATAACAA...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATATTCACGCCATAAGTaGAATTCTTCATTGAGTCGT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVYSRHK*NSSLSR
Trigger: ACGACTCAATGAAGAATTCCACTTATGGCGTGAATA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTCACTGCCTCGAGGGCTaGGGAAGACTAAAATTTATT +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFHCLEG*GRLKFI
Trigger: AATAAATTTTAGTCTTCCCCAGCCCTCGAGGCAGTG...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCATTCTGGCATATAACTaGATAAGTGCTTGTGTCACG +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSILAYN*ISACVT
Trigger: CGTGACACAAGCACTTATTCAGTTATATGCCAGAAT...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATCTGTCAGGTTGGACTaGTTGTTAATACCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: QLLKARGICLRMRVSKVGSVRLD*LLIPKN
Trigger: ATTTTTGGGTATTAACAATCAGTCCAACCTGACAGA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCTGTGACGTCTGTGATTaGATTTCTGAAGACATAGTC +
Preference number: 4 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSCDVCD*ISEDIV
Trigger: GACTATGTCTTCAGAAATGCAATCACAGACGTCACA...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTACAGACTCTCTTCTGTTaGACTTTAAACTCTTACTTT +
Preference number: 4 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVQTLFC*TLNSYF
Trigger: AAAGTAAGAGTTTAAAGTGCAACAGAAGAGAGTCTG...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433566.8
CDS-3UTR CCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACAAAGTTCATATGGTCCTaGGTCAGGACTTCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTKFIWS*VRTSSS
Trigger: ACTACTGGAAGTCCTGACCCAGGACCATATGAACTT...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGCCAAACACTTTTAGCTaGAGTTATTTATCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LKARGICLRMRVSKVGKRPNTFS*SYLSLQ
Trigger: TTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGG...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR TCA 90 bp CTAATAACAAGGGTTAATACAGTAACAGGAATTGATCATTTCTGGGTGAGGACAAATAATAAGACTGGCTaGGCTTGGGGTAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: LITRVNTVTGIDHFWVRTNNKTG*AWGNPR
Trigger: TCTTGGATTACCCCAAGCTCAGCCAGTCTTATTATT...TGTCCTCACCCAGAAATGATCAATTCCTGTTACTGTATTAACCCTTGTTATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTGACGGTGTTCTGGCATaGCTTAGAGTTCCTAATAAC +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFDGVLA*LRVPNN
Trigger: GTTATTAGGAACTCTAAGCCATGCCAGAACACCGTC...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTACCATTGAAGTTTATTaGCGGTCACAATGCTTACAC +
Preference number: 4 (lower is better)
Translates to: PHISIGALDSVKIFQSHFTIEVY*RSQCLH
Trigger: GTGTAAGCATTGTGACCGCCAATAAACTTCAATGGT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR TCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTATATACATGATGACGTaGGGTTCCAGGCTTGCAATA +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFIYMMT*GSRLAI
Trigger: TATTGCAAGCCTGGAACCTCACGTCATCATGTATAT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTAGCTCATCATGTCATTaGTATTCACGCCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFSSSCH*YSRHKW
Trigger: CCACTTATGGCGTGAATAGCAATGACATGATGAGCT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTAGAGTAAGATGCCATTaGGGGAAGAGACATCAAACT +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFRVRCH*GKRHQT
Trigger: AGTTTGATGTCTCTTCCCCCAATGGCATCTTACTCT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTAAGACTAAAATTTATTaGCCACACACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFKTKIY*PHTAGP
Trigger: AGGCCCTGCTGTGTGTGGCCAATAAATTTTAGTCTT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTAGGATGGGTGGTGTCTaGTTGATTAATTTCATTGGT +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFRMGGV*LINFIG
Trigger: ACCAATGAAATTAATCAAGCAGACACCACCCATCCT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR GCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTGTGTCAGGATGCGATTaGCATACATTGTTATCATCT +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFVSGCD*HTLLSS
Trigger: AGATGATAACAATGTATGGCAATCGCATCCTGACAC...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CCA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTTTGTTATCATCTTGCTaGTTTCTCGGAAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFLLSSC*FLGRVR
Trigger: TCTTACTCTTCCGAGAAACCAGCAAGATGATAACAA...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCACCCAGTCCCCCAGGAACCAGCAGCGCCCTGCCCCCTAGTGAGTGTACTCACAGGAGTAGCTGGCACTaGCTCAGGCAATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PPSPPGTSSALPPSECTHRSSWH*LRQSGL
Trigger: CAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCCT...GTGAGTACACTCACTAGGGGGCAGGGCGCTGCTGGTTCCTGGGGGACTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGCACTGCAATGTCCATaGGGCTTGCGCTGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: THSRASGGLTHIAPRRAVALQCP*GLRWRS
Trigger: AGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGC...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp TCCATTGGGCTTGCGCTGGCGCTCTGTAGCAGCTCCTGGTACGACTaGGCCGACTGGTCAAACAACTGCACGAGGAGTGCACACGTCTTC +
Preference number: 5 (lower is better)
Translates to: SIGLALALCSSSWYD*ADWSNNCTRSAHVF
Trigger: GAAGACGTGTGCACTCCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp ATGTCAGCCTTCCCTCCTGCACTGCAATGTCCATTGGGCTTGCGCTaGCGCTCTGTAGCAGCTCCTGGTACGACTGGGCCGACTGGTCAA +
Preference number: 5 (lower is better)
Translates to: MSAFPPALQCPLGLR*RSVAAPGTTGPTGQ
Trigger: TTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGCAGGAGGGAAGGCTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 90 bp GCACCGTGGACAGCATCTGCTGGATCATCTCTGGATGCTGCTGCATaGTGTGCAGAAAGCGGTCGCTCTCCTGGTTCAGGGGTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: APWTASAGSSLDAAA*CAESGRSPGSGVWS
Trigger: GGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGTCCACGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp ACTGCAATGTCCATTGGGCTTGCGCTGGCGCTCTGTAGCAGCTCCTaGTACGACTGGGCCGACTGGTCAAACAACTGCACGAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TAMSIGLALALCSSS*YDWADWSNNCTRSA
Trigger: TGCACTCCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp GTCTTCTCATATTCACAACGCCCAATGGTGGACAGCTGGTCCAACTaGTGCTGGACCAGCCCCGTATCCTCCAGGGGATCTTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: VFSYSQRPMVDSWSN*CWTSPVSSRGSSRP
Trigger: TGGCCTGGAAGATCCCCTGGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTGAATATGAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTAGGTGTGGTCCTCTTCTaGGTGCTACGTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVGVVLF*VLRDSC
Trigger: GCAGCTGTCACGTAGCACCAAGAAGAGGACCACACC...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACGGTGTGGTCCTCTTCTaGGTGCTACGTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYGVVLF*VLRDSC
Trigger: GCAGCTGTCACGTAGCACCAAGAAGAGGACCACACC...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp TTCTCATATTCACAACGCCCAATGGTGGACAGCTGGTCCAACTGCTaGTGGACCAGCCCCGTATCCTCCAGGGGATCTTCCAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: FSYSQRPMVDSWSNC*WTSPVSSRGSSRPS
Trigger: AGATGGCCTGGAAGATCCCCTGGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTGAATATGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp ATCAGCTGGAGCACCCGACAGACAAGCTCACCATCCATGGCGTCTTaGTCATCAGTGCTGGCAAAAGAAACCCGGCCACCGATCACTGCT +
Preference number: 5 (lower is better)
Translates to: ISWSTRQTSSPSMAS*SSVLAKETRPPITA
Trigger: AGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTGTCTGTCGGGTGCTCCAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp GTGGACAGCATCTGCTGGATCATCTCTGGATGCTGCTGCATGATGTaGAGAAAGCGGTCGCTCTCCTGGTTCAGGGGTGTGGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VDSICWIISGCCCMM*RKRSLSWFRGVVLF
Trigger: GAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp CTTGCGCTGGCGCTCTGTAGCAGCTCCTGGTACGACTGGGCCGACTaGTCAAACAACTGCACGAGGAGTGCACACGTCTTCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: LALALCSSSWYDWAD*SNNCTRSAHVFSYS
Trigger: TGAATATGAGAAGACGTGTGCACTCCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp ATCTCTGGATGCTGCTGCATGATGTGCAGAAAGCGGTCGCTCTCCTaGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: ISGCCCMMCRKRSLS*FRGVVLFLVLRDSC
Trigger: GCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGCATAGACCTGATCCTTaGGGACCTCTCCTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: THSRASGGLTHIAPRRAVHRPDP*GPLLVS
Trigger: TGACACTAGGAGAGGTCCCAAAGGATCAGGTCTATG...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 90 bp GTCGCTCTCCTGGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGTaGCAGCTGCTTGAAGAGGTATGTCACAATGTGGTCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: VALLVQGCGPLLGAT*QLLEEVCHNVVQAG
Trigger: TCCTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp TCCTGGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGTGACAGCTaGTTGAAGAGGTATGTCACAATGTGGTCCAGGCAGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SWFRGVVLFLVLRDS*LKRYVTMWSRQEQQ
Trigger: CTGCTGCTCCTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCCAAGGAGGTGTCAGCTCATCATGTC +
Preference number: 5 (lower is better)
Translates to: LPCNCSPLWAKPKGR*SVQVESKEVSAHHV
Trigger: GACATGATGAGCTGACACCTCCTTGGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGCTACGTGACAGCTGCTaGAAGAGGTATGTCACAATG +
Preference number: 5 (lower is better)
Translates to: THSRASGGLTHIAPRRAVLRDSC*KRYVTM
Trigger: CATTGTGACATACCTCTTCAAGCAGCTGTCACGTAG...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGCCAGGCCCTCTCCCTaGCAATTGTTCGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHARPSP*QLFAPL
Trigger: CAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGG +
Preference number: 5 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTVSYSC*HRFSSW
Trigger: CCAACTAGAGAATCTGTGCAAACAGCTGTATGAAAC...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACCTGGAGTCGAGTGGTaGTGTCTGTGGTTTCATACA +
Preference number: 5 (lower is better)
Translates to: LPCNCSPLWAKPKGRCSVPGVEW*CLWFHT
Trigger: TGTATGAAACCACAGACACAACCACTCGACTCCAGG...TACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTGTGCGTGATACAAGCTaGGTAAGGCATGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVVRDTS*VRHVAA
Trigger: GGCAGCTACATGCCTTACCAAGCTTGTATCACGCAC...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTTCCAATGGTAGGGGGTaGTTTGTGCGTGATACAAGC +
Preference number: 5 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSSNGRG*FVRDTS
Trigger: GCTTGTATCACGCACAAACAACCCCCTACCATTGGA...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ACACACAGCAGGGCCTCTGGTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGCTATTTTTCTGTGCTaGGTTAAAGGATGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: THSRASGGLTHIAPRRAVAIFLC*VKGWVV
Trigger: CACCACCCATCCTTTAACCAAGCACAGAAAAATAGC...CACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCACCAGAGGCCCTGCTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGGCTATTTTTCTGTGCTaGGTTAAAGGATGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGAIFLC*VKGWVV
Trigger: CACCACCCATCCTTTAACCAAGCACAGAAAAATAGC...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTAGTGAGCTTGAGCAGTaGCATGAGCAAGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVSELEQ*HEQAML
Trigger: CAGCATGGCTTGCTCATGCAACTGCTCAAGCTCACT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCAGGATCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAACAGCTGCAAGGTaGAAGAATCTAAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: PGSARPSPLQLFAPLGQTKTAAR*KNLRRL
Trigger: CAGCCTTCTTAGATTCTTCAACCTTGCAGCTGTTTT...GGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGCACTGCAATGTCCATaGGGCTTGCGCTGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGALQCP*GLRWRS
Trigger: AGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTACCATCCATGGCGTCTaGCTCATCAGTGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVTIHGV*LISAGK
Trigger: TTTGCCAGCACTGATGAGCAAGACGCCATGGATGGT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp GTCTTGCTCATCAGTGCTGGCAAAAGAAACCCGGCCACCGATCACTaGTCCAATAATGTAAACCAGCCATGTCAGCCTTCCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: VLLISAGKRNPATDH*SNNVNQPCQPSLLH
Trigger: GTGCAGGAGGGAAGGCTGACATGGCTGGTTTACATTATTGGAGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp CGCTCGATGCCTTCCATCAGGTTCTCAAAACACAGGTGCATGGCCTaGTGCTTCTCCGGTGGCTGGCTGTTCACAATACTGTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: RSMPSIRFSKHRCMA*CFSGGWLFTILFLR
Trigger: CCTAAGAAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGGCATCGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS GCA 90 bp TGCACCTGCACCATCCACTGTCAGCTGCAGAATTCTAGTAGCCCTTaGTTCTGGATTCTTGGCTGGCAGAGTCCTTTAGACCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: CTCTIHCQLQNSSSP*FWILGWQSPLDPLC
Trigger: GCAAAGGGGGTCTAAAGGACTCTGCCAGCCAAGAATCCAGAAGCAAGGGCTACTAGAATTCTGCAGCTGACAGTGGATGGTGCAGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 90 bp TTGGTTCCAAAGCTACACTGGCCCATACCCAGGCCCTTGGAATTCTaGGGCACTCCAGGGCTGATTTCTGCAGCAAGGGTAAGAGATTTC +
Preference number: 5 (lower is better)
Translates to: LVPKLHWPIPRPLEF*GTPGLISAARVRDF
Trigger: GAAATCTCTTACCCTTGCTGCAGAAATCAGCCCTGGAGTGCCCCAGAATTCCAAGGGCCTGGGTATGGGCCAGTGTAGCTTTGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTATGGTAGGGGGTTGTTaGTGCGTGATACAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVMVGGC*CVIQAW
Trigger: CCAAGCTTGTATCACGCACAAACAACCCCCTACCAT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTTGCTCGTTGAAACTATaGGTGCTAAACATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSCSLKL*VLNIWA
Trigger: GGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCA...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCAAGCTGGTCTTGGCATaGAAAGCGAAAGCGATCCCT +
Preference number: 5 (lower is better)
Translates to: QNLHGPRGGTVFWHGLEFKLVLA*KAKAIP
Trigger: AGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTT...GAACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGAATTCAGCCATCAACTaGAGTACAGGTGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGNSAIN*STGVVQ
Trigger: CTGTACTACACCTGTACTCAAGTTGATGGCTGAATT...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGCCCTCTCCCTTGCAATaGTTCGCCCCTCTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQPSPLQ*FAPLGQ
Trigger: TTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGG...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAGGCTGGAGTCTCAGTTaGTATCTCTTATCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRGWSLS*YLLSPP
Trigger: GGGAGGAGATAAGAGATACAAACTGAGACTCCAGCC...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCACTCTCACACATCCTaGTCCAGTAAAGCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVHSHTS*SSKASG
Trigger: GCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTG...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp AGAAGATTTCGCTCGATGCCTTCCATCAGGTTCTCAAAACACAGGTaGATGGCCTGCTGCTTCTCCGGTGGCTGGCTGTTCACAATACTG +
Preference number: 5 (lower is better)
Translates to: RRFRSMPSIRFSKHR*MACCFSGGWLFTIL
Trigger: CAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGGCATCGAGCGAAATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS GCA 90 bp TGGGGCACTCCAGGGCTGATTTCTGCAGCAAGGGTAAGAGATTTCTaGGGCAGTGATAACATGCAGACGTATGCAATTCTGCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: WGTPGLISAARVRDF*GSDNMQTYAILHLH
Trigger: GTGCAGGTGCAGAATTGCATACGTCTGCATGTTATCACTGCCGCAGAAATCTCTTACCCTTGCTGCAGAAATCAGCCCTGGAGTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 90 bp GTTCGCTTTGCCTCCTGCTCGTTGAAACTATTGGTGCTAAACATCTaGGCCACAGCCTCAAATGCTGCTGTGAGTGGCAGCATGAACTGC +
Preference number: 5 (lower is better)
Translates to: VRFASCSLKLLVLNI*ATASNAAVSGSMNC
Trigger: GCAGTTCATGCTGCCACTCACAGCAGCATTTGAGGCTGTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 90 bp GATTTCGCTCGATGCCTTCCATCAGGTTCTCAAAACACAGGTGCATaGCCTGCTGCTTCTCCGGTGGCTGGCTGTTCACAATACTGTTTC +
Preference number: 5 (lower is better)
Translates to: DFARCLPSGSQNTGA*PAASPVAGCSQYCF
Trigger: GAAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGGCATCGAGCGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS-3UTR CAA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGATTGGCCCTCTCTGCATaGTTAAACAGGGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRLALSA*LNRDLL
Trigger: CAGAAGATCCCTGTTTAACAATGCAGAGAGGGCCAA...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCAGCCAGGCCCTCTCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGTACCAATTCTCCCAGTaGATAGTTACTCTTCAATCG +
Preference number: 5 (lower is better)
Translates to: SARPSPLQLFAPLGQTKGYQFSQ*IVTLQS
Trigger: CGATTGAAGAGTAACTATCAACTGGGAGAATTGGTA...CCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGACCATCCATGGCGTCTaGCTCATCAGTGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: ARGICLRMRVSKVGKRVETIHGV*LISAGK
Trigger: TTTGCCAGCACTGATGAGCAAGACGCCATGGATGGT...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GTGGACTCACCCACATTGCTCCCAGGAGAGCAGTGGGCTCACTTCCTTCTCTCTTTTGCCTCCTGCTCGTaGAAACTATTGGTGCTAAAC +
Preference number: 5 (lower is better)
Translates to: VDSPTLLPGEQWAHFLLSFASCS*KLLVLN
Trigger: GTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAA...AGAGAGAAGGAAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTCTACGTGACAGCTGCTaGAAGAGGTATGTCACAATG +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVLRDSC*KRYVTM
Trigger: CATTGTGACATACCTCTTCAAGCAGCTGTCACGTAG...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp TCGATGCCTTCCATCAGGTTCTCAAAACACAGGTGCATGGCCTGCTaGTTCTCCGGTGGCTGGCTGTTCACAATACTGTTTCTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: SMPSIRFSKHRCMAC*FSGGWLFTILFLRS
Trigger: TGACCTAAGAAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGGCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS GCA 90 bp CATGCAGACGTATGCAATTCTGCACCTGCACCATCCACTGTCAGCTaGAGAATTCTAGTAGCCCTTGCTTCTGGATTCTTGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: HADVCNSAPAPSTVS*RILVALASGFLAGR
Trigger: TCTGCCAGCCAAGAATCCAGAAGCAAGGGCTACTAGAATTCTGCAGCTGACAGTGGATGGTGCAGGTGCAGAATTGCATACGTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS-3UTR CAA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGAAGGTCTGCAGAGCATaGTCCAGGGCATCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQKVCRA*SRASSP
Trigger: TGGAGACGATGCCCTGGACAATGCTCTGCAGACCTT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTTTCTTCATTGAGTCGTaGACTTCTCGACGGAATGCT +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVFFIES*TSRRNA
Trigger: AGCATTCCGTCGAGAAGTCAACGACTCAATGAAGAA...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGCCCTCTCCCTTGCAATaGTTCGCCCCTCTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: LKARGICLRMRVSKVGKRPSPLQ*FAPLGQ
Trigger: TTGGCCCAGAGGGGCGAACAATTGCAAGGGAGAGGG...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGGTGGACTCACCCACATaGCTCCCAGGAGAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PTFKSKRHLSEDEGKQSRVDSPT*LPGEQW
Trigger: CCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC...CCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 90 bp ATTCAACCAAGGCTTTCTCTGCCTGGAGTCGAGTGGTTGTGTCTGTaGTTTCATACAGCTGTTTGCACAGATTCTCTAGTTGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: IQPRLSLPGVEWLCL*FHTAVCTDSLVGPG
Trigger: GCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAGTGCGTGATACAAGCTaGGTAAGGCATGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKVRDTS*VRHVAA
Trigger: GGCAGCTACATGCCTTACCAAGCTTGTATCACGCAC...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTATCATGAAGCTGGTCTaGGCATTGAAAGCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGIMKLV*ALKAKA
Trigger: CGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGAT...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACAGGTAGAAATTCAGCCATCAACTaGAGTACAGGTGTAGTACAG +
Preference number: 5 (lower is better)
Translates to: QLFAPLGQTKGTLLCTGRNSAIN*STGVVQ
Trigger: CTGTACTACACCTGTACTCAAGTTGATGGCTGAATT...TCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCCCTTGCAATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTGCTCTGTACTACATTGTTATCATCTaGCTGGTTTCTCGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: SLAIVRPSGPNQRDAALYYIVII*LVSRKS
Trigger: ACTCTTCCGAGAAACCAGCAAGATGATAACAATGTA...GTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATTGCAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATAGAGAGGAGCAGCTaGATGAAGGTCTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHIERSS*MKVCRA
Trigger: TGCTCTGCAGACCTTCATCAAGCTGCTCCTCTCTAT...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCGCCAGGCCCTCTCCCTaGCAATTGTTCGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSARPSP*QLFAPL
Trigger: CAGAGGGGCGAACAATTGCAAGGGAGAGGGCCTGGC...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACCACTCTCACACATCCTaGTCCAGTAAAGCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHHSHTS*SSKASG
Trigger: GCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTG...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAGTGGACTCACCCACATaGCTCCCAGGAGAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QLLKARGICLRMRVSKVGVDSPT*LPGEQW
Trigger: CCACTGCTCTCCTGGGAGCAATGTGGGTGAGTCCAC...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp GCTCAGGCAATCAGGGCTGTTGGTAAATTCAACCAAGGCTTTCTCTaGCTGGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AQAIRAVGKFNQGFL*LESSGCVCGFIQLF
Trigger: AAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS GCA 90 bp ATTTCTGCGGCAGTGATAACATGCAGACGTATGCAATTCTGCACCTaGACCATCCACTGTCAGCTGCAGAATTCTAGTAGCCCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: ISAAVITCRRMQFCT*TIHCQLQNSSSPCF
Trigger: GAAGCAAGGGCTACTAGAATTCTGCAGCTGACAGTGGATGGTGCAGGTGCAGAATTGCATACGTCTGCATGTTATCACTGCCGCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 90 bp AGGCAATCAGGGCTGTTGGTAAATTCAACCAAGGCTTTCTCTGCCTaGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: RQSGLLVNSTKAFSA*SRVVVSVVSYSCLH
Trigger: GTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS-3UTR CAA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAGGAGTAGCTGGCACTaGCTCAGGCAATCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QLLKARGICLRMRVSKVGRSSWH*LRQSGL
Trigger: CAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCCT...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAGAATCTACACGGTCCAAGGGGAGGGACGGTGTTCTGGCATGGCTTAGAGTTACTCATGGTAATTGTTaGGGTCTGATAAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: AESTRSKGRDGVLAWLRVTHGNC*GLINSV
Trigger: CACAGAGTTTATCAGACCCAAACAATTACCATGAGT...AACTCTAAGCCATGCCAGAACACCGTCCCTCCCCTTGGACCGTGTAGATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp ATGTTTATACAAGGCAGGTTGTGGCAGGACACTAGGGGTTCTCCCCACTTGGGTAGAAGCTGTAGTGTCTaGGAGGTGATTGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: MFIQGRLWQDTRGSPHLGRSCSV*EVIGSQ
Trigger: TTGTGAACCAATCACCTCCAAGACACTACAGCTTCT...ACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGGTGGAGAGAAGCTGTAGTGTCTaGGAGGTGATTGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: ARGICLRMRVSKVGKRVERSCSV*EVIGSQ
Trigger: TTGTGAACCAATCACCTCCAAGACACTACAGCTTCT...CTCCACCCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CTCTGCACTCTCACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACGAGCTCAATTGCCCGTaGGAGAATTGGCATATAGGA +
Preference number: 5 (lower is better)
Translates to: LCTLTHPCPVKLQATRIHELNCP*ENWHIG
Trigger: TCCTATATGCCAATTCTCCAACGGGCAATTGAGCTC...GTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTGAGAGTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCGAGCTCAATTGCCCGTaGGAGAATTGGCATATAGGA +
Preference number: 5 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGELNCP*ENWHIG
Trigger: TCCTATATGCCAATTCTCCAACGGGCAATTGAGCTC...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAATAGAGAGGAGCAGCTaGATGAAGGTCTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKIERSS*MKVCRA
Trigger: TGCTCTGCAGACCTTCATCAAGCTGCTCCTCTCTAT...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATTTATACAAGGCAGGTaGTGGCAGGACACTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKFIQGR*WQDTRG
Trigger: ACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATTGGCCCTCTCTGCATaGTTAAACAGGGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLALSA*LNRDLL
Trigger: CAGAAGATCCCTGTTTAACAATGCAGAGAGGGCCAA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGTGCTCGTTGAAACTATaGGTGCTAAACATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQCSLKL*VLNIWA
Trigger: GGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCA...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAATCATGAAGCTGGTCTaGGCATTGAAAGCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKIMKLV*ALKAKA
Trigger: CGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGAT...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp TGCCATACATTGTTATCATCTTGCTGGTTTCTCGGAAGAGTAAGATaGCATTGGGGGAAGAGACATCAAACTGGAGTCGCTGGGACCTAT +
Preference number: 5 (lower is better)
Translates to: CHTLLSSCWFLGRVR*HWGKRHQTGVAGTY
Trigger: ATAGGTCCCAGCGACTCCAGTTTGATGTCTCTTCCCCCAATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAATGTATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS-3UTR CAA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTACCTGGAGTCGAGTGGTaGTGTCTGTGGTTTCATACA +
Preference number: 5 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVPGVEW*CLWFHT
Trigger: TGTATGAAACCACAGACACAACCACTCGACTCCAGG...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGATGGTAGGGGGTTGTTaGTGCGTGATACAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: PLYCVTKYISALSHILVQMVGGC*CVIQAW
Trigger: CCAAGCTTGTATCACGCACAAACAACCCCCTACCAT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAAGAGGATTTCTGCACTaGGTCCCCAATGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKRGFLH*VPNVDL
Trigger: AAGATCTACATTGGGGACCAAGTGCAGAAATCCTCT...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAAAGAGTAAGATGCCATaGGGGGAAGAGACATCAAAC +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKKSKMP*GEETSN
Trigger: GTTTGATGTCTCTTCCCCCAATGGCATCTTACTCTT...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTACATAGACCTGATCCTTaGGGACCTCTCCTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVHRPDP*GPLLVS
Trigger: TGACACTAGGAGAGGTCCCAAAGGATCAGGTCTATG...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAAAGGTCTGCAGAGCATaGTCCAGGGCATCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTKVCRA*SRASSP
Trigger: TGGAGACGATGCCCTGGACAATGCTCTGCAGACCTT...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS GCA 90 bp GTAAGTATAATCTGGCAGTATCGTGGGAATCAGGACCACCGTCTTTaGTGTAGCAATACCCGGGACCTCAGTTTACATATCTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: VSIIWQYRGNQDHRL*CSNTRDLSLHISFM
Trigger: CATAAAGGAGATATGTAAACTGAGGTCCCGGGTATTGCTACAGCAAAGACGGTGGTCCTGATTCCCACGATACTGCCAGATTATACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 90 bp TTGGGACAGTTGGTAGGAGGCAAAATGTCACTCTGCACACAGCCCTaGGTAATATATTTGGCTCCTAGTGTGTGCTTTGATAAATTGAGC +
Preference number: 5 (lower is better)
Translates to: LGQLVGGKMSLCTQP*VIYLAPSVCFDKLS
Trigger: GCTCAATTTATCAAAGCACACACTAGGAGCCAAATATATTACCCAGGGCTGTGTGCAGAGTGACATTTTGCCTCCTACCAACTGTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 90 bp ATCATCTGGATCTCAAAGAGCCACTCTGATGACGTAAGTATAATCTaGCAGTATCGTGGGAATCAGGACCACCGTCTTTGCTGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: IIWISKSHSDDVSII*QYRGNQDHRLCCSN
Trigger: ATTGCTACAGCAAAGACGGTGGTCCTGATTCCCACGATACTGCCAGATTATACTTACGTCATCAGAGTGGCTCTTTGAGATCCAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATTGCCCGTTGGAGAATaGGCATATAGGATGGATATA +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKLPVGE*AYRMDI
Trigger: TATATCCATCCTATATGCCAATTCTCCAACGGGCAA...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGGGCTACATTGTTATCATCTaGCTGGTTTCTCGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QTLLAGVIYHCKGLGTQGYIVII*LVSRKS
Trigger: ACTCTTCCGAGAAACCAGCAAGATGATAACAATGTA...GCCCTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CACCAAACACTTTTAGCTGGAGTTATTTATCACTGCAAGGGGCTAGGGACCCAGAGTGTCAGGATGCGATaGCCATACATTGTTATCATC +
Preference number: 5 (lower is better)
Translates to: HQTLLAGVIYHCKGLGTQSVRMR*PYIVII
Trigger: GATGATAACAATGTATGGCAATCGCATCCTGACACT...CTGGGTCCCTAGCCCCTTGCAGTGATAAATAACTCCAGCTAAAAGTGTTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGATTTATACAAGGCAGGTaGTGGCAGGACACTAGGGGT +
Preference number: 5 (lower is better)
Translates to: QLLKARGICLRMRVSKVGFIQGR*WQDTRG
Trigger: ACCCCTAGTGTCCTGCCACAACCTGCCTTGTATAAA...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp GAGTACAGGTGTAGTACAGGCTGGATCATGGTACCAGAGCTCAATTaGCCGTTGGAGAATTGGCATATAGGATGGATATATCCATTCAAA +
Preference number: 5 (lower is better)
Translates to: EYRCSTGWIMVPELN*PLENWHIGWIYPFK
Trigger: TTTGAATGGATATATCCATCCTATATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACACCTGTACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 90 bp ACATTGTTATCATCTTGCTGGTTTCTCGGAAGAGTAAGATGCCATTaGGGGAAGAGACATCAAACTGGAGTCGCTGGGACCTATTATGAA +
Preference number: 5 (lower is better)
Translates to: TLLSSCWFLGRVRCH*GKRHQTGVAGTYYE
Trigger: TTCATAATAGGTCCCAGCGACTCCAGTTTGATGTCTCTTCCCCCAATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 90 bp TGTCAGCTGCAGAATTCTAGTAGCCCTTGCTTCTGGATTCTTGGCTaGCAGAGTCCTTTAGACCCCCTTTGCTTTTTCCATCTTAAATTA +
Preference number: 5 (lower is better)
Translates to: CQLQNSSSPCFWILG*QSPLDPLCFFHLKL
Trigger: TAATTTAAGATGGAAAAAGCAAAGGGGGTCTAAAGGACTCTGCCAGCCAAGAATCCAGAAGCAAGGGCTACTAGAATTCTGCAGCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS-3UTR CAA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACAGAGGATTTCTGCACTaGGTCCCCAATGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHRGFLH*VPNVDL
Trigger: AAGATCTACATTGGGGACCAAGTGCAGAAATCCTCT...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CAACTTTTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGACCAATGGACAGGTCATaGAGAAGCTGTAGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: QLLKARGICLRMRVSKVGPMDRS*RSCSVL
Trigger: CAAGACACTACAGCTTCTCAATGACCTGTCCATTGG...TCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGTTTGCCTCCTGCTCGTaGAAACTATTGGTGCTAAAC +
Preference number: 5 (lower is better)
Translates to: PLYCVTKYISALSHILVQFASCS*KLLVLN
Trigger: GTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAA...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGTTCTTCATTGAGTCGTaGACTTCTCGACGGAATGCT +
Preference number: 5 (lower is better)
Translates to: LKARGICLRMRVSKVGKRFFIES*TSRRNA
Trigger: AGCATTCCGTCGAGAAGTCAACGACTCAATGAAGAA...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp GAAACCATTGAAGTTTATTGGCGGTCACAATGCTTACACTGTATGCAGCAAACAGGCTGGAGTCTCAGTTaGTATCTCTTATCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: ETIEVYWRSQCLHCMQQTGWSLS*YLLSPP
Trigger: GGGAGGAGATAAGAGATACAAACTGAGACTCCAGCC...TGTTTGCTGCATACAGTGTAAGCATTGTGACCGCCAATAAACTTCAATGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252512.14
CDS-3UTR CAA 90 bp TCTCTCTGGTCTCTGCCTTCACACAGACCAAGAACCCTACAACACGTCGTTAAAGCAGACTCTCTTCTGTaGCACTTTAAACTCTTACTT +
Preference number: 5 (lower is better)
Translates to: SLWSLPSHRPRTLQHVVKADSLL*HFKLLL
Trigger: AAGTAAGAGTTTAAAGTGCAACAGAAGAGAGTCTGC...TTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAGGCAGAGACCAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433566.8
CDS-3UTR CAA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGAAAACAGCTGCAAGGTaGAAGAATCTAAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: LKARGICLRMRVSKVGKRKTAAR*KNLRRL
Trigger: CAGCCTTCTTAGATTCTTCAACCTTGCAGCTGTTTT...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTAAGCTGGTCTTGGCATaGAAAGCGAAAGCGATCCCT +
Preference number: 5 (lower is better)
Translates to: PHISIGALDSVKIFQSHFKLVLA*KAKAIP
Trigger: AGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp AACCCTTCCACTGTAGTAACTTCCTCCAGTTCATACATTCATGAGTGCAGGGTATTGCCCGTTGGAGAATaGGCATATAGGATGGATATA +
Preference number: 5 (lower is better)
Translates to: NPSTVVTSSSSYIHECRVLPVGE*AYRMDI
Trigger: TATATCCATCCTATATGCCAATTCTCCAACGGGCAA...TACCCTGCACTCATGAATGTATGAACTGGAGGAAGTTACTACAGTGGAAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CACACATCCTTGTCCAGTAAAGCTTCAGGCCACCAGAATACACATTTTCTTCACAGTGTCAGGATGCGATaGCCATACATTGTTATCATC +
Preference number: 5 (lower is better)
Translates to: HTSLSSKASGHQNTHFLHSVRMR*PYIVII
Trigger: GATGATAACAATGTATGGCAATCGCATCCTGACACT...GTGAAGAAAATGTGTATTCTGGTGGCCTGAAGCTTTACTGGACAAGGATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 90 bp GCACCGTGGACAGCATCTGAAAATGGAATGGAGAATTTCAGGCAGTaGCCTAATGTATTGCTACCCAAGATAAAACGACAGATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: APWTASENGMENFRQ*PNVLLPKIKRQIPN
Trigger: ATTTGGAATCTGTCGTTTTATCTTGGGTAGCAATACATTAGGTCACTGCCTGAAATTCTCCATTCCATTTTCAGATGCTGTCCACGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522015.1
CDS-3UTR CAA 90 bp CCTCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTAGGCAATCAGGGCTGTaGGTAAATTCAACCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PHISIGALDSVKIFQSHFRQSGL*VNSTKA
Trigger: AGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCT...AAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp CCTCTCTACTGTGTCACTAAATATATCTCTGCACTCTCACACATCCTTGTCCAGACTCATGGTAATTGTTaGGGTCTGATAAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: PLYCVTKYISALSHILVQTHGNC*GLINSV
Trigger: CACAGAGTTTATCAGACCCAAACAATTACCATGAGT...CTGGACAAGGATGTGTGAGAGTGCAGAGATATATTTAGTGACACAGTAGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGTACCAATTCTCCCAGTaGATAGTTACTCTTCAATCG +
Preference number: 5 (lower is better)
Translates to: LKARGICLRMRVSKVGKRYQFSQ*IVTLQS
Trigger: CGATTGAAGAGTAACTATCAACTGGGAGAATTGGTA...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TTAAAAGCAAGAGGCATCTGTCTGAGGATGAGGGTAAGCAAAGTAGGAAAGAGGTGCGATTGCCATACATaGTTATCATCTTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: LKARGICLRMRVSKVGKRCDCHT*LSSCWF
Trigger: AAACCAGCAAGATGATAACAATGTATGGCAATCGCA...CCTCTTTCCTACTTTGCTTACCCTCATCCTCAGACAGATGCCTCTTGCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 90 bp AAACTCTGTGGGTTTTCCAGTATTCGTTTAACACCATCAACAAGATaGGAGAGAAACTTGGCCCTCTCTGCATTGTTAAACAGGGATCTT +
Preference number: 5 (lower is better)
Translates to: KLCGFSSIRLTPSTR*ERNLALSALLNRDL
Trigger: AAGATCCCTGTTTAACAATGCAGAGAGGGCCAAGTTTCTCTCTCATCTTGTTGATGGTGTTAAACGAATACTGGAAAACCCACAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 90 bp ACAGCAAATAGCACGATGTATATTCATAAAAGTACTGACTCCCTCTaGATTCCGAAGCATGGTTCACAAAGGCTATCTATTCAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TANSTMYIHKSTDSL*IPKHGSQRLSIQSL
Trigger: CAGGCTTTGAATAGATAGCCTTTGTGAACCATGCTTCGGAATGCAGAGGGAGTCAGTACTTTTATGAATATACATCGTGCTATTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518017.1
CDS CCA 90 bp ATTTGGTTGACTAGAAAAATTATCCTTCAGATAATCTTCACTACTTaGTTCCAAAGCTACACTGGCCCATACCCAGGCCCTTGGAATTCT +
Preference number: 5 (lower is better)
Translates to: IWLTRKIILQIIFTT*FQSYTGPYPGPWNS
Trigger: AGAATTCCAAGGGCCTGGGTATGGGCCAGTGTAGCTTTGGAACCAAGTAGTGAAGATTATCTGAAGGATAATTTTTCTAGTCAACCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS-3UTR CAA 90 bp CTTCACACAGACCAAGAACCCTACAACACGTCGTTAAATCCAACTTTTAAAAGCGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGG +
Preference number: 5 (lower is better)
Translates to: LHTDQEPYNTSLNPTFKSVSYSC*HRFSSW
Trigger: CCAACTAGAGAATCTGTGCAAACAGCTGTATGAAAC...GCTTTTAAAAGTTGGATTTAACGACGTGTTGTAGGGTTCTTGGTCTGTGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTTCCAATGGTAGGGGGTaGTTTGTGCGTGATACAAGC +
Preference number: 5 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFSNGRG*FVRDTS
Trigger: GCTTGTATCACGCACAAACAACCCCCTACCATTGGA...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCTGGTCACTGTGAAGTaGGCTATCAATCGGATGACC +
Preference number: 5 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFLVTVK*AINRMT
Trigger: GGTCATCCGATTGATAGCCAACTTCACAGTGACCAG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTCCAATGGACAGGTCATaGAGAAGCTGTAGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFPMDRS*RSCSVL
Trigger: CAAGACACTACAGCTTCTCAATGACCTGTCCATTGG...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS-3UTR CAA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTAAGAGTAAGATGCCATaGGGGGAAGAGACATCAAAC +
Preference number: 5 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFKSKMP*GEETSN
Trigger: GTTTGATGTCTCTTCCCCCAATGGCATCTTACTCTT...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 90 bp CAATGTTTTCCTAGTCGCCAGTTCTTATTAAGGATATCTATTCTTTaGTGCCACTTTGGTCAGAGAAAATCCTCCAGAGAAGAATGTCTA +
Preference number: 5 (lower is better)
Translates to: QCFPSRQFLLRISIL*CHFGQRKSSREECL
Trigger: TAGACATTCTTCTCTGGAGGATTTTCTCTGACCAAAGTGGCATCAAAGAATAGATATCCTTAATAAGAACTGGCGACTAGGAAAACATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520754.1
CDS CCA 90 bp CATCCTGACTTTCACAGGAATGACAACCTTTATGCTTCGAAAATGTaGGAGATCACATTAAGAGATATTTCTTTACGGGAAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: HPDFHRNDNLYASKM*EITLRDISLRETAN
Trigger: ATTTGCTGTTTCCCGTAAAGAAATATCTCTTAATGTGATCTCCCACATTTTCGAAGCATAAAGGTTGTCATTCCTGTGAAAGTCAGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518017.1
ENST00000520754.1
CDS-3UTR CAA 90 bp TCACATCAGCATTGGTGCACTAGACTCTGTAAAAATTTTTCAGTCACACTTTTTTGCGATTGCCATACATaGTTATCATCTTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SHQHWCTRLCKNFSVTLFCDCHT*LSSCWF
Trigger: AAACCAGCAAGATGATAACAATGTATGGCAATCGCA...AAAAAGTGTGACTGAAAAATTTTTACAGAGTCTAGTGCACCAATGCTGATGTGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp CCAGCCATGTCAGCCTTCCCTCCTGCACTGCAATGTCCATTGGGCTaGCGCTGGCGCTCTGTAGCAGCTCCTGGTACGACTGGGCCGACT +
Preference number: 6 (lower is better)
Translates to: PAMSAFPPALQCPLG*RWRSVAAPGTTGPT
Trigger: AGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGCAGGAGGGAAGGCTGACATGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp TTCCCTCCTGCACTGCAATGTCCATTGGGCTTGCGCTaGCGCTCTGTAGCAGCTCCTGGTACGACTGGGCCG +
Preference number: 6 (lower is better)
Translates to: FPPALQCPLGLR*RSVAAPGTTGP
Trigger: CGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGCAGGAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp TCACAACGCCCAATGGTGGACAGCTGGTCCAACTGCTaGTGGACCAGCCCCGTATCCTCCAGGGGATCTTCC +
Preference number: 6 (lower is better)
Translates to: SQRPMVDSWSNC*WTSPVSSRGSS
Trigger: GGAAGATCCCCTGGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp CTTGCGCTGGCGCTCTGTAGCAGCTCCTGGTACGACTaGGCCGACTGGTCAAACAACTGCACGAGGAGTGCA +
Preference number: 6 (lower is better)
Translates to: LALALCSSSWYD*ADWSNNCTRSA
Trigger: TGCACTCCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp TCCATTGGGCTTGCGCTGGCGCTCTGTAGCAGCTCCTaGTACGACTGGGCCGACTGGTCAAACAACTGCACG +
Preference number: 6 (lower is better)
Translates to: SIGLALALCSSS*YDWADWSNNCT
Trigger: CGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp GCGCTCTGTAGCAGCTCCTGGTACGACTGGGCCGACTaGTCAAACAACTGCACGAGGAGTGCACACGTCTTC +
Preference number: 6 (lower is better)
Translates to: ALCSSSWYDWAD*SNNCTRSAHVF
Trigger: GAAGACGTGTGCACTCCTCGTGCAGTTGTTTGACCAGTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp CATCAGCTGGAGCACCCGACAGACAAGCTCACCATCCATGGCGTCTaGCTCATCAGTGCTGGCAAAAGAAACCCGGCCACCGATCACTGC +
Preference number: 6 (lower is better)
Translates to: HQLEHPTDKLTIHGV*LISAGKRNPATDHC
Trigger: GCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTGTCTGTCGGGTGCTCCAGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp TATTCACAACGCCCAATGGTGGACAGCTGGTCCAACTaGTGCTGGACCAGCCCCGTATCCTCCAGGGGATCT +
Preference number: 6 (lower is better)
Translates to: YSQRPMVDSWSN*CWTSPVSSRGS
Trigger: AGATCCCCTGGAGGATACGGGGCTGGTCCAGCAGCAGTTGGACCAGCTGTCCACCATTGGGCGTTGTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AGCACCCGACAGACAAGCTCACCATCCATGGCGTCTTaGTCATCAGTGCTGGCAAAAGAAACCCGGCCACCG +
Preference number: 6 (lower is better)
Translates to: STRQTSSPSMAS*SSVLAKETRPP
Trigger: CGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTGTCTGTCGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 72 bp GAGCACCCGACAGACAAGCTCACCATCCATGGCGTCTaGCTCATCAGTGCTGGCAAAAGAAACCCGGCCACC +
Preference number: 6 (lower is better)
Translates to: EHPTDKLTIHGV*LISAGKRNPAT
Trigger: GGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTGTCTGTCGGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp ACCGTGGACAGCATCTGCTGGATCATCTCTGGATGCTaGTGCATGATGTGCAGAAAGCGGTCGCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TVDSICWIISGC*CMMCRKRSLSW
Trigger: CCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGTCCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AGCACCGTGGACAGCATCTGCTGGATCATCTCTGGATaGTGCTGCATGATGTGCAGAAAGCGGTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: STVDSICWIISG*CCMMCRKRSLS
Trigger: GGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGTCCACGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp TGCTGCTGCATGATGTGCAGAAAGCGGTCGCTCTCCTaGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGT +
Preference number: 6 (lower is better)
Translates to: CCCMMCRKRSLS*FRGVVLFLVLR
Trigger: ACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp TGGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGTGACAGCTGCTaGAAGAGGTATGTCACAATGTGGTCCAGGCAGGAGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: WFRGVVLFLVLRDSC*KRYVTMWSRQEQQP
Trigger: AGGCTGCTGCTCCTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 72 bp ACAGCATCTGCTGGATCATCTCTGGATGCTGCTGCATaGTGTGCAGAAAGCGGTCGCTCTCCTGGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: TASAGSSLDAAA*CAESGRSPGSG
Trigger: CCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AGACAAGCTCACCATCCATGGCGTCTTGCTCATCAGTaGTGGCAAAAGAAACCCGGCCACCGATCACTGCTC +
Preference number: 6 (lower is better)
Translates to: RQAHHPWRLAHQ*WQKKPGHRSLL
Trigger: GAGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp ATCTGCTGGATCATCTCTGGATGCTGCTGCATGATGTaGAGAAAGCGGTCGCTCTCCTGGTTCAGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: ICWIISGCCCMM*RKRSLSWFRGV
Trigger: CACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp GTGGACAGCATCTGCTGGATCATCTCTGGATGCTGCTaGATGATGTGCAGAAAGCGGTCGCTCTCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: VDSICWIISGCC*MMCRKRSLSWF
Trigger: GAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAGCAGATGCTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AATTGTTCGCCCCTCTGGGCCAAACCAAAGGGACGCTaGTCTGTACAGGTAGAGTCCAAGGAGGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: NCSPLWAKPKGR*SVQVESKEVSA
Trigger: AGCTGACACCTCCTTGGACTCTACCTGTACAGAGCAGCGTCCCTTTGGTTTGGCCCAGAGGGGCGAACAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp CAAGCTCACCATCCATGGCGTCTTGCTCATCAGTGCTaGCAAAAGAAACCCGGCCACCGATCACTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: QAHHPWRLAHQC*QKKPGHRSLLQ
Trigger: TTGGAGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGATGAGCAAGACGCCATGGATGGTGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp TGCAGAAAGCGGTCGCTCTCCTGGTTCAGGGGTGTGGTCCTCTTCTaGGTGCTACGTGACAGCTGCTTGAAGAGGTATGTCACAATGTGG +
Preference number: 6 (lower is better)
Translates to: CRKRSLSWFRGVVLF*VLRDSCLKRYVTMW
Trigger: CCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AGGGGTGTGGTCCTCTTCTTGGTGCTACGTGACAGCTaGTTGAAGAGGTATGTCACAATGTGGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RGVVLFLVLRDS*LKRYVTMWSRQ
Trigger: CTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp CCTTCCATCAGGTTCTCAAAACACAGGTGCATGGCCTaGTGCTTCTCCGGTGGCTGGCTGTTCACAATACTG +
Preference number: 6 (lower is better)
Translates to: PSIRFSKHRCMA*CFSGGWLFTIL
Trigger: CAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS CCA 72 bp GCCTCCTGCTCGTTGAAACTATTGGTGCTAAACATCTaGGCCACAGCCTCAAATGCTGCTGTGAGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: ASCSLKLLVLNI*ATASNAAVSGS
Trigger: GCTGCCACTCACAGCAGCATTTGAGGCTGTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 72 bp GGTGTGGTCCTCTTCTTGGTGCTACGTGACAGCTGCTaGAAGAGGTATGTCACAATGTGGTCCAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GVVLFLVLRDSC*KRYVTMWSRQE
Trigger: CTCCTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp TCTGCCTGGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCTTCCTCCCTGGATCC +
Preference number: 6 (lower is better)
Translates to: SAWSRVVVSVVSYSC*HRFSSWARLFLPGS
Trigger: GGATCCAGGGAGGAAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433566.8
CDS TCA 72 bp CTGGTTCAGGGGTGTGGTCCTCTTCTTGGTGCTACGTaGCAGCTGCTTGAAGAGGTATGTCACAATGTGGTC +
Preference number: 6 (lower is better)
Translates to: LVQGCGPLLGAT*QLLEEVCHNVV
Trigger: GACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAGGACCACACCCCTGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp CTCAGCATGGCCAACTCTAGCTTCTCATTACCCGCCTaGGCCAAACGAGAATCTGTTAGGTTCATCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LSMANSSFSLPA*AKRESVRFISW
Trigger: CCAGCTGATGAACCTAACAGATTCTCGTTTGGCCCAGGCGGGTAATGAGAAGCTAGAGTTGGCCATGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 90 bp CCTCTTTCGAGGAGTAGCTGGCACTTGCTCAGGCAATCAGGGCTGTaGGTAAATTCAACCAAGGCTTTCTCTGCCTGGAGTCGAGTGGTT +
Preference number: 6 (lower is better)
Translates to: PLSRSSWHLLRQSGL*VNSTKAFSAWSRVV
Trigger: AACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCCTCGAAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000521303.5
CDS CAA 90 bp TCTGCCTGGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCTTCGTTGGAGCGACA +
Preference number: 6 (lower is better)
Translates to: SAWSRVVVSVVSYSC*HRFSSWARLFVGAT
Trigger: TGTCGCTCCAACGAAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518017.1
CDS CAA 90 bp TCTGCCTGGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCACAGCACTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SAWSRVVVSVVSYSC*HRFSSWARLTALSL
Trigger: CAAGGAGAGTGCTGTGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520754.1
CDS GCA 72 bp ATCAGTGCTGGCAAAAGAAACCCGGCCACCGATCACTaGTCCAATAATGTAAACCAGCCATGTCAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ISAGKRNPATDH*SNNVNQPCQPS
Trigger: GGAAGGCTGACATGGCTGGTTTACATTATTGGAGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp TCCATCAGGTTCTCAAAACACAGGTGCATGGCCTGCTaGTTCTCCGGTGGCTGGCTGTTCACAATACTGTTT +
Preference number: 6 (lower is better)
Translates to: SIRFSKHRCMAC*FSGGWLFTILF
Trigger: AAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS CAA 72 bp AGGAGTAGCTGGCACTTGCTCAGGCAATCAGGGCTGTaGGTAAATTCAACCAAGGCTTTCTCTGCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RSSWHLLRQSGL*VNSTKAFSAWS
Trigger: ACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCTGAGCAAGTGCCAGCTACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000521303.5
CDS CAA 72 bp ACTAGGCCAACTAGAGTTCGCTTTGCCTCCTGCTCGTaGAAACTATTGGTGCTAAACATCTGGGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: TRPTRVRFASCS*KLLVLNIWATA
Trigger: GGCTGTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAACTCTAGTTGGCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 90 bp ACGCTACTGTACCCAATGGACAGGTCATTGAGAAGCTGTAGTGTCTaGGAGGTGATTGGTTCACAACGGCCCCAGTACTTCAAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: TLLYPMDRSLRSCSV*EVIGSQRPQYFKLV
Trigger: CACCAACTTGAAGTACTGGGGCCGTTGTGAACCAATCACCTCCAAGACACTACAGCTTCTCAATGACCTGTCCATTGGGTACAGTAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518808.1
CDS CAA 90 bp ACTAGGCCAACTAGAGTTCGCTTTGCCTCCTGCTCGTTGAAACTATaGGTGCTAAACATCTGGGCCACAGCCTCAAATGCTGCTGTGAGT +
Preference number: 6 (lower is better)
Translates to: TRPTRVRFASCSLKL*VLNIWATASNAAVS
Trigger: ACTCACAGCAGCATTTGAGGCTGTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAACTCTAGTTGGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS GCA 72 bp GGGTTGGGACAGTTGGTAGGAGGCAAAATGTCACTCTaGACACAGCCCTGGGTAATATATTTGGCTCCTAGT +
Preference number: 6 (lower is better)
Translates to: GLGQLVGGKMSL*TQPWVIYLAPS
Trigger: ACTAGGAGCCAAATATATTACCCAGGGCTGTGTGCAGAGTGACATTTTGCCTCCTACCAACTGTCCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS GCA 72 bp ACCATCCACTGTCAGCTGCAGAATTCTAGTAGCCCTTaGTTCTGGATTCTTGGCTGGCAGAGTCCTTTAGAC +
Preference number: 6 (lower is better)
Translates to: TIHCQLQNSSSP*FWILGWQSPLD
Trigger: GTCTAAAGGACTCTGCCAGCCAAGAATCCAGAAGCAAGGGCTACTAGAATTCTGCAGCTGACAGTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS GCA 72 bp TCTGCGGCAGTGATAACATGCAGACGTATGCAATTCTaGACCTGCACCATCCACTGTCAGCTGCAGAATTCT +
Preference number: 6 (lower is better)
Translates to: SAAVITCRRMQF*TCTIHCQLQNS
Trigger: AGAATTCTGCAGCTGACAGTGGATGGTGCAGGTGCAGAATTGCATACGTCTGCATGTTATCACTGCCGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS GCA 72 bp ATCTGGCAGTATCGTGGGAATCAGGACCACCGTCTTTaGTGTAGCAATACCCGGGACCTCAGTTTACATATC +
Preference number: 6 (lower is better)
Translates to: IWQYRGNQDHRL*CSNTRDLSLHI
Trigger: GATATGTAAACTGAGGTCCCGGGTATTGCTACAGCAAAGACGGTGGTCCTGATTCCCACGATACTGCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 72 bp GGGCTGTTGGTAAATTCAACCAAGGCTTTCTCTGCCTaGAGTCGAGTGGTTGTGTCTGTGGTTTCATACAGC +
Preference number: 6 (lower is better)
Translates to: GLLVNSTKAFSA*SRVVVSVVSYS
Trigger: GCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS CCA 72 bp AGGTTGAAGAATCTAAGAAGGCTGATCTCCAGCTGGTaGGAATCTGCACTGTACACAGGTCGTCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: RLKNLRRLISSW*ESALYTGRLRT
Trigger: AGTCCTCAGACGACCTGTGTACAGTGCAGATTCCCACCAGCTGGAGATCAGCCTTCTTAGATTCTTCAACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CCA 72 bp TTCAGCCATCAACTTGAGTACAGGTGTAGTACAGGCTaGATCATGGTACCAGAGCTCAATTGCCCGTTGGAG +
Preference number: 6 (lower is better)
Translates to: FSHQLEYRCSTG*IMVPELNCPLE
Trigger: CTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACACCTGTACTCAAGTTGATGGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 72 bp TCAGATAATCTTCACTACTTGGTTCCAAAGCTACACTaGCCCATACCCAGGCCCTTGGAATTCTGGGGCACT +
Preference number: 6 (lower is better)
Translates to: SDNLHYLVPKLH*PIPRPLEFWGT
Trigger: AGTGCCCCAGAATTCCAAGGGCCTGGGTATGGGCCAGTGTAGCTTTGGAACCAAGTAGTGAAGATTATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CAA 72 bp AGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: SRVVVSVVSYSC*HRFSSWARLCT
Trigger: TGTGCAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000519769.5
ENST00000521303.5
CDS CAA 72 bp TACCCAATGGACAGGTCATTGAGAAGCTGTAGTGTCTaGGAGGTGATTGGTTCACAACGGCCCCAGTACTTC +
Preference number: 6 (lower is better)
Translates to: YPMDRSLRSCSV*EVIGSQRPQYF
Trigger: GAAGTACTGGGGCCGTTGTGAACCAATCACCTCCAAGACACTACAGCTTCTCAATGACCTGTCCATTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518808.1
CDS CAA 72 bp AGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRVVVSVVSYSC*HRFSSWARLFL
Trigger: GAGGAAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433566.8
CDS CAA 72 bp AGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCACAGCA +
Preference number: 6 (lower is better)
Translates to: SRVVVSVVSYSC*HRFSSWARLTA
Trigger: TGCTGTGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520754.1
CDS CCA 72 bp ATCAACTTGAGTACAGGTGTAGTACAGGCTGGATCATaGTACCAGAGCTCAATTGCCCGTTGGAGAATTGGC +
Preference number: 6 (lower is better)
Translates to: INLSTGVVQAGS*YQSSIARWRIG
Trigger: GCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACACCTGTACTCAAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 72 bp AAACACAGGTGCATGGCCTGCTGCTTCTCCGGTGGCTaGCTGTTCACAATACTGTTTCTTAGGTCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: KHRCMACCFSGG*LFTILFLRSEK
Trigger: TTTTTCTGACCTAAGAAACAGTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000522015.1
CDS CAA 72 bp ACTAGAGTTCGCTTTGCCTCCTGCTCGTTGAAACTATaGGTGCTAAACATCTGGGCCACAGCCTCAAATGCT +
Preference number: 6 (lower is better)
Translates to: TRVRFASCSLKL*VLNIWATASNA
Trigger: AGCATTTGAGGCTGTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAACTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 72 bp AGTCGAGTGGTTGTGTCTGTGGTTTCATACAGCTGTTaGCACAGATTCTCTAGTTGGGCCAGGCTCTTCGTT +
Preference number: 6 (lower is better)
Translates to: SRVVVSVVSYSC*HRFSSWARLFV
Trigger: AACGAAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518017.1
CDS CAA 90 bp TGGGCCAGGCTCTTCGTTGGAGCGACAAATGCTGTGAAGATTGCTTaGATGCATCCTGACTTTCACAGGAATGACAACCTTTATGCTTCG +
Preference number: 6 (lower is better)
Translates to: WARLFVGATNAVKIA*MHPDFHRNDNLYAS
Trigger: CGAAGCATAAAGGTTGTCATTCCTGTGAAAGTCAGGATGCATCAAAGCAATCTTCACAGCATTTGTCGCTCCAACGAAGAGCCTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518017.1
CDS GCA 72 bp ATCAGGGCTGTTGGTAAATTCAACCAAGGCTTTCTCTaGCTGGAGTCGAGTGGTTGTGTCTGTGGTTTCATA +
Preference number: 6 (lower is better)
Translates to: IRAVGKFNQGFL*LESSGCVCGFI
Trigger: TATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS GCA 72 bp GTGTCAGGATGCGATTGCCATACATTGTTATCATCTTaGTGGTTTCTCGGAAGAGTAAGATGCCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: VSGCDCHTLLSS*WFLGRVRCHWG
Trigger: CCCCCAATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAATGTATGGCAATCGCATCCTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 72 bp AGGCTTTCTCTGCCTGGAGTCGAGTGGTTGTGTCTGTaGTTTCATACAGCTGTTTGCACAGATTCTCTAGTT +
Preference number: 6 (lower is better)
Translates to: RLSLPGVEWLCL*FHTAVCTDSLV
Trigger: AACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS CCA 72 bp CAGAATTCTAGTAGCCCTTGCTTCTGGATTCTTGGCTaGCAGAGTCCTTTAGACCCCCTTTGCTTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: QNSSSPCFWILG*QSPLDPLCFFH
Trigger: ATGGAAAAAGCAAAGGGGGTCTAAAGGACTCTGCCAGCCAAGAATCCAGAAGCAAGGGCTACTAGAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CCA 72 bp ATCTCAAAGAGCCACTCTGATGACGTAAGTATAATCTaGCAGTATCGTGGGAATCAGGACCACCGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: ISKSHSDDVSII*QYRGNQDHRLC
Trigger: GCAAAGACGGTGGTCCTGATTCCCACGATACTGCCAGATTATACTTACGTCATCAGAGTGGCTCTTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CAA 72 bp ATTCAACCAAGGCTTTCTCTGCCTGGAGTCGAGTGGTaGTGTCTGTGGTTTCATACAGCTGTTTGCACAGAT +
Preference number: 6 (lower is better)
Translates to: IQPRLSLPGVEW*CLWFHTAVCTD
Trigger: ATCTGTGCAAACAGCTGTATGAAACCACAGACACAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000519769.5
ENST00000520754.1
ENST00000521303.5
CDS CAA 72 bp AGCTTCCTTACGCTACTGTACCCAATGGACAGGTCATaGAGAAGCTGTAGTGTCTTGGAGGTGATTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SFLTLLYPMDRS*RSCSVLEVIGS
Trigger: TGAACCAATCACCTCCAAGACACTACAGCTTCTCAATGACCTGTCCATTGGGTACAGTAGCGTAAGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518808.1
CDS CAA 90 bp GATGGATATATCCATTCAAAGAGCATCATGAAGCTGGTCTTGGCATaGAAAGCGAAAGCGATCCCTCTCAGGTCTCTTACTAGGCCAACT +
Preference number: 6 (lower is better)
Translates to: DGYIHSKSIMKLVLA*KAKAIPLRSLTRPT
Trigger: AGTTGGCCTAGTAAGAGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGATGCTCTTTGAATGGATATATCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 90 bp ATTCTCCACTTACGAATATCTATTCGCTGTTCCAATGGTAGGGGGTaGTTTGTGCGTGATACAAGCTTGGTAAGGCATGTAGCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: ILHLRISIRCSNGRG*FVRDTSLVRHVAAS
Trigger: ACTGGCAGCTACATGCCTTACCAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAACAGCGAATAGATATTCGTAAGTGGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519769.5
CDS GCA 72 bp TTGTTATCATCTTGCTGGTTTCTCGGAAGAGTAAGATaGCATTGGGGGAAGAGACATCAAACTGGAGTCGCT +
Preference number: 6 (lower is better)
Translates to: LLSSCWFLGRVR*HWGKRHQTGVA
Trigger: AGCGACTCCAGTTTGATGTCTCTTCCCCCAATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CCA 72 bp TTGGTAGGAGGCAAAATGTCACTCTGCACACAGCCCTaGGTAATATATTTGGCTCCTAGTGTGTGCTTTGAT +
Preference number: 6 (lower is better)
Translates to: LVGGKMSLCTQP*VIYLAPSVCFD
Trigger: ATCAAAGCACACACTAGGAGCCAAATATATTACCCAGGGCTGTGTGCAGAGTGACATTTTGCCTCCTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CAA 72 bp ATCCATTCAAAGAGCATCATGAAGCTGGTCTTGGCATaGAAAGCGAAAGCGATCCCTCTCAGGTCTCTTACT +
Preference number: 6 (lower is better)
Translates to: IHSKSIMKLVLA*KAKAIPLRSLT
Trigger: AGTAAGAGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGATGCTCTTTGAATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 72 bp GGATATATCCATTCAAAGAGCATCATGAAGCTGGTCTaGGCATTGAAAGCGAAAGCGATCCCTCTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GYIHSKSIMKLV*ALKAKAIPLRS
Trigger: AGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGATGCTCTTTGAATGGATATATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 72 bp AGTGTCAGGATGCGATTGCCATACATTGTTATCATCTaGCTGGTTTCTCGGAAGAGTAAGATGCCATTGGGG +
Preference number: 6 (lower is better)
Translates to: SVRMRLPYIVII*LVSRKSKMPLG
Trigger: CCCCAATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAATGTATGGCAATCGCATCCTGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 90 bp AGGTGTAGTACAGGCTGGATCATGGTACCAGAGCTCAATTGCCCGTaGGAGAATTGGCATATAGGATGGATATATCCATTCAAAGAGCAT +
Preference number: 6 (lower is better)
Translates to: RCSTGWIMVPELNCP*ENWHIGWIYPFKEH
Trigger: ATGCTCTTTGAATGGATATATCCATCCTATATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 90 bp TTCTTGTCTCGCTTCGTTGGAGCGACAAATGCTGTGAAGATTGCTTaGATGCATCCTGACTTTCACAGGAATGACAACCTTTATGCTTCG +
Preference number: 6 (lower is better)
Translates to: FLSRFVGATNAVKIA*MHPDFHRNDNLYAS
Trigger: CGAAGCATAAAGGTTGTCATTCCTGTGAAAGTCAGGATGCATCAAAGCAATCTTCACAGCATTTGTCGCTCCAACGAAGCGAGACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520754.1
CDS GCA 72 bp TGTAGTACAGGCTGGATCATGGTACCAGAGCTCAATTaGCCGTTGGAGAATTGGCATATAGGATGGATATAT +
Preference number: 6 (lower is better)
Translates to: CSTGWIMVPELN*PLENWHIGWIY
Trigger: ATATATCCATCCTATATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS GCA 72 bp GGTAGAGTCCAAGGAGGTGTCAGCTCATCATGTCATTaGTATTCACGCCATAAGTGGAATTCTTCATTGAGT +
Preference number: 6 (lower is better)
Translates to: GRVQGGVSSSCH*YSRHKWNSSLS
Trigger: ACTCAATGAAGAATTCCACTTATGGCGTGAATAGCAATGACATGATGAGCTGACACCTCCTTGGACTCTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS CAA 72 bp TTCCGAATATCTATTCGCTGTTCCAATGGTAGGGGGTaGTTTGTGCGTGATACAAGCTTGGTAAGGCATGTA +
Preference number: 6 (lower is better)
Translates to: FRISIRCSNGRG*FVRDTSLVRHV
Trigger: TACATGCCTTACCAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAACAGCGAATAGATATTCGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
ENST00000521303.5
CDS CAA 72 bp GTCAAAGTTGAGGCAGTTATGAGTGAGCTTGAGCAGTaGCATGAGCAAGCCATGCTGACTTTCATCATTCAA +
Preference number: 6 (lower is better)
Translates to: VKVEAVMSELEQ*HEQAMLTFIIQ
Trigger: TTGAATGATGAAAGTCAGCATGGCTTGCTCATGCAACTGCTCAAGCTCACTCATAACTGCCTCAACTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000518017.1
CDS CAA 72 bp AACAAAAGGGAGGACTTAGGCTTTATCCAGAAGTTATaGCGTCGGGCCCTTCACTTTCATAAGCCCCAAATT +
Preference number: 6 (lower is better)
Translates to: NKREDLGFIQKL*RRALHFHKPQI
Trigger: AATTTGGGGCTTATGAAAGTGAAGGGCCCGACGCAATAACTTCTGGATAAAGCCTAAGTCCTCCCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519769.5
CDS CCA 72 bp ACTAGAAAAATTATCCTTCAGATAATCTTCACTACTTaGTTCCAAAGCTACACTGGCCCATACCCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: TRKIILQIIFTT*FQSYTGPYPGP
Trigger: AGGGCCTGGGTATGGGCCAGTGTAGCTTTGGAACCAAGTAGTGAAGATTATCTGAAGGATAATTTTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CAA 72 bp GATCATGGTACCAGAGCTCAATTGCCCGTTGGAGAATaGGCATATAGGATGGATATATCCATTCAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: DHGTRAQLPVGE*AYRMDISIQRA
Trigger: TGCTCTTTGAATGGATATATCCATCCTATATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS CAA 72 bp ATTATTAAACCAGCTCATGGATATGAGTGTTTAGGGTaGGGACAGTTGGTAGGAGGCAAAATGTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: IIKPAHGYECLG*GQLVGGKMSLC
Trigger: GCAGAGTGACATTTTGCCTCCTACCAACTGTCCCAACCCTAAACACTCATATCCATGAGCTGGTTTAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518808.1
CDS CAA 72 bp TTACGAATATCTATTCGCTGTTCCAATGGTAGGGGGTaGTTTGTGCGTGATACAAGCTTGGTAAGGCATGTA +
Preference number: 6 (lower is better)
Translates to: LRISIRCSNGRG*FVRDTSLVRHV
Trigger: TACATGCCTTACCAAGCTTGTATCACGCACAAACAACCCCCTACCATTGGAACAGCGAATAGATATTCGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519769.5
CDS TCA 72 bp GTCTGTCAGGTTGGACTGATTGTTAATACCCAAAAATaGAAAGTGCTCGCTCGTGTGATTGTTCAGCATGAA +
Preference number: 6 (lower is better)
Translates to: VCQVGLIVNTQK*KVLARVIVQHE
Trigger: TTCATGCTGAACAATCACACGAGCGAGCACTTTTCATTTTTGGGTATTAACAATCAGTCCAACCTGACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS TCA 72 bp CCTTCAGAAATGGAAGAGAGAATATACATGATGACGTaGGGTTCCAGGCTTGCAATAAAGTTCATATGGTCC +
Preference number: 6 (lower is better)
Translates to: PSEMEERIYMMT*GSRLAIKFIWS
Trigger: GGACCATATGAACTTTATTGCAAGCCTGGAACCTCACGTCATCATGTATATTCTCTCTTCCATTTCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252512.14
ENST00000433566.8
ENST00000517551.2
CDS GCA 72 bp CCAGTTGATAGTTACTCTTCAATCGGGCCAGTAGTCTaGAAAACTCATGGTAATTGTTTGGGTCTGATAAAC +
Preference number: 6 (lower is better)
Translates to: PVDSYSSIGPVV*KTHGNCLGLIN
Trigger: GTTTATCAGACCCAAACAATTACCATGAGTTTTGCAGACTACTGGCCCGATTGAAGAGTAACTATCAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252512.14
ENST00000433566.8
CDS GCA 72 bp AGCACGATGTATATTCATAAAAGTACTGACTCCCTCTaGATTCCGAAGCATGGTTCACAAAGGCTATCTATT +
Preference number: 6 (lower is better)
Translates to: STMYIHKSTDSL*IPKHGSQRLSI
Trigger: AATAGATAGCCTTTGTGAACCATGCTTCGGAATGCAGAGGGAGTCAGTACTTTTATGAATATACATCGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518017.1
CDS TCA 72 bp AAAACGACAGATTCCAAATACAGGAGTATATTAGGCTaGAGGCCTTTTCTGTATAGGGTAAATCAGACAAAT +
Preference number: 6 (lower is better)
Translates to: KTTDSKYRSILG*RPFLYRVNQTN
Trigger: ATTTGTCTGATTTACCCTATACAGAAAAGGCCTTCAGCCTAATATACTCCTGTATTTGGAATCTGTCGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522015.1
CDS CCA 72 bp TTTCACAGGAATGACAACCTTTATGCTTCGAAAATGTaGGAGATCACATTAAGAGATATTTCTTTACGGGAA +
Preference number: 6 (lower is better)
Translates to: FHRNDNLYASKM*EITLRDISLRE
Trigger: TTCCCGTAAAGAAATATCTCTTAATGTGATCTCCCACATTTTCGAAGCATAAAGGTTGTCATTCCTGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518017.1
ENST00000520754.1