RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPO5 (Homo sapiens)

Ensembl gene IDs: ENSG00000124571

Ensembl transcript IDs: ENST00000265351.12, ENST00000398799.2, ENST00000398835.7, ENST00000424378.2, ENST00000450462.6, ENST00000455285.2, ENST00000455854.2, ENST00000486936.2, ENST00000488195.6, ENST00000496341.6, ENST00000513451.1, ENST00000612911.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAGGTACCTGGGGCGCAGTGCCTCGTATATCTGGAAGGCCAGATaGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTGCATCTGT +
Preference number: 1 (lower is better)
Translates to: SRYLGRSASYIWKAR*TREAMHPSCCPCIC
Trigger: ACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCTTCCAGATATACGAGGCACTGCGCCCCAGGTACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR GCA 90 bp GTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTaGACGGGGGTGGGAGGGCTTGTGGGAGAAGGGCTGCTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: VGHSTLSYHSVQVCG*TGVGGLVGEGLLCS
Trigger: AGAGCAGAGCAGCCCTTCTCCCACAAGCCCTCCCACCCCCGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR GCA 90 bp AAGGCCAGATGGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTaGATCTGTAAGCCTTTCAGCACACTGGTGAAAAGCCACGTAACT +
Preference number: 1 (lower is better)
Translates to: KARWTREAMHPSCCP*ICKPFSTLVKSHVT
Trigger: AGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR GCA 90 bp AGAGCACCACACAGGAAGAGGGAGCAACACAAGACTCCCAACTTCTaGTTCCCCAGCTTTGCTTCTTCTCAATCTGACCCTGCCTGTGGC +
Preference number: 1 (lower is better)
Translates to: RAPHRKREQHKTPNF*FPSFASSQSDPACG
Trigger: GCCACAGGCAGGGTCAGATTGAGAAGAAGCAAAGCTGGGGAAGCAGAAGTTGGGAGTCTTGTGTTGCTCCCTCTTCCTGTGTGGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 90 bp GGAAAGTTTCCTGCCAGCCCAGCAGCAAAAGGGCTCAGTGGGAGTTaGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGT +
Preference number: 1 (lower is better)
Translates to: GKFPASPAAKGLSGS*SGPRETLAQVVEGC
Trigger: ACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCAACTCCCACTGAGCCCTTTTGCTGCTGGGCTGGCAGGAAACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 90 bp AGTCCACTTCGGCTCTCGGGGAAACCCTCTTGTCAGTGGACTGGATaGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGT +
Preference number: 1 (lower is better)
Translates to: SPLRLSGKPSCQWTG*TTGLFLCRAHGHTG
Trigger: ACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGGTTTCCCCGAGAGCCGAAGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 90 bp GGGCCAGGTCCCGTATCCATGTCCTCTCTTTACAGGGCCTTTCAGTaGCCTCTAGAATGGACTCACAGTACAGGTTGTGATGTGAAGGCA +
Preference number: 1 (lower is better)
Translates to: GPGPVSMSSLYRAFQ*PLEWTHSTGCDVKA
Trigger: TGCCTTCACATCACAACCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGACATGGATACGGGACCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 90 bp CAAGACTCCCAACTTCTGCTTCCCCAGCTTTGCTTCTTCTCAATCTaGCCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTCAGT +
Preference number: 1 (lower is better)
Translates to: QDSQLLLPQLCFFSI*PCLWPAPAKNCSFS
Trigger: ACTGAAGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGCAAAGCTGGGGAAGCAGAAGTTGGGAGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 90 bp TGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTCTTGTCAGTaGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATGGA +
Preference number: 1 (lower is better)
Translates to: CSFSPLRLSGKPSCQ*TGWTTGLFLCRAHG
Trigger: TCCATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 90 bp ATCCTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTaGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACC +
Preference number: 1 (lower is better)
Translates to: ILHSPNQTGIGSYQV*RETLLRSPSRSTET
Trigger: GGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR GCA 90 bp TTGCAGTCAAACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTaGTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: LQSNWSSESFCISGI*SITALISRYLGRSA
Trigger: GGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR CCA 90 bp TATAACCCACCACAAATCCCCCAGCTTTGGCCTCTTCTAGGTCAGTaGGCCAGCAAGTTCGTTTCACCACACCCAGAATGCTGTATACAC +
Preference number: 1 (lower is better)
Translates to: YNPPQIPQLWPLLGQ*ASKFVSPHPECCIH
Trigger: GTGTATACAGCATTCTGGGTGTGGTGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTGTGGTGGGTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR TCA 90 bp GGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAAGGCTaGGCTGAGAAGCTGGGTAGCAAGGTCCTCCACAGTATAGAAGTC +
Preference number: 1 (lower is better)
Translates to: GSESVVRNIVQVDKG*AEKLGSKVLHSIEV
Trigger: GACTTCTATACTGTGGAGGACCTTGCTACCCAGCTTCTCAGCTCAGCCTTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATaGATTAACTCTGCCTTACGGCCAGTAATAACCTCAGGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: QVCFCAEHMDTLVSV*INSALRPVITSGPG
Trigger: ACCTGGCCCTGAGGTTATTACTGGCCGTAAGGCAGAGTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 90 bp TCAGAATCTGCTCTGTGCAGGGGTTACGGAAGATTGGATTTCCACTaGATGTATAACCCACCACAAATCCCCCAGCTTTGGCCTCTTCTA +
Preference number: 1 (lower is better)
Translates to: SESALCRGYGRLDFH*MYNPPQIPQLWPLL
Trigger: TAGAAGAGGCCAAAGCTGGGGGATTTGTGGTGGGTTATACATCCAGTGGAAATCCAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR TCA 90 bp TTGGAAATGGCCTTTGAGAAAAGTAACCAGGGACCTGAAAGACCATaGGATTGTGGAAGGCACCTGGACTTAGTCCTAGGAGAAGACCAG +
Preference number: 1 (lower is better)
Translates to: LEMAFEKSNQGPERP*DCGRHLDLVLGEDQ
Trigger: CTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTTCCACAATCTCATGGTCTTTCAGGTCCCTGGTTACTTTTCTCAAAGGCCATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR GCA 90 bp TGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTaGTCTGTGCAGGGGTTACGGAAGATTGGATTTCCACTGGATGTA +
Preference number: 1 (lower is better)
Translates to: WVLISASKLSRSFRI*SVQGLRKIGFPLDV
Trigger: TACATCCAGTGGAAATCCAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR TCA 90 bp TCTGGGACATCTAGACAGAATAGTTTAAGCCCTAACTCCCTTTCTTaGTACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTC +
Preference number: 1 (lower is better)
Translates to: SGTSRQNSLSPNSLS*YFSIITSGPAQGLF
Trigger: GAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTATCAAGAAAGGGAGTTAGGGCTTAAACTATTCTGTCTAGATGTCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp GGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCGTAGGCCAGCAGAGCTGTaGGGTTGTCCTCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GFAPLQLLSPGTWGAVPRRPAEL*GCPLAG
Trigger: TCCTGCCAGAGGACAACCTCACAGCTCTGCTGGCCT...ACGAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR CCA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTGTGGCTGCACGGGGGTaGGAGGGCTTGTGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: WSGPRETLAQVVEGCALAVAARG*EGLWEK
Trigger: CTTCTCCCACAAGCCCTCCCACCCCCGTGCAGCCAC...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR GCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTGTACAGGTATGTGGCTaGACGGGGGTGGGAGGGCTT +
Preference number: 2 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAVQVCG*TGVGGL
Trigger: AAGCCCTCCCACCCCCGTGCAGCCACATACCTGTAC...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR GCA 90 bp AGGGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCGAAAAGCCACGTAACTaGATCTGCGAGCAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: RDLLHYSSYLQVPGAQCLEKPRN*ICEQCP
Trigger: GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTC...GAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR CCA 90 bp CCTCCTCACATTCCTCACTGCCCGGGTTCTGGGGGCCTTACTTTCTTCAACAGTCACTCCCCAGCCATCTaGAAGCTAGTTTTGGGATCC +
Preference number: 2 (lower is better)
Translates to: PPHIPHCPGSGGLTFFNSHSPAI*KLVLGS
Trigger: GGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTG...ACTGTTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR-3UTR GCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTAAAGTGAGGTGGCAGTaGAAGAAGGGCCTAGAGATC +
Preference number: 2 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPKVRWQ*KKGLEI
Trigger: GATCTCTAGGCCCTTCTTGCACTGCCACCTCACTTT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTGGTGGAAAGTGAGGTaGCAGTGCAAGAAGGGCCTA +
Preference number: 2 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHWWKVR*QCKKGL
Trigger: TAGGCCCTTCTTGCACTGCCACCTCACTTTCCACCA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGTTCTGTACAGGTATGTaGCTGCACGGGGGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLFCTGM*LHGGGR
Trigger: CCTCCCACCCCCGTGCAGCCACATACCTGTACAGAA...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGGGCTCAGTGGGAGTTaGAGTGGTCCAAGAGAAACT +
Preference number: 2 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETGLSGS*SGPRET
Trigger: AGTTTCTCTTGGACCACTCCAACTCCCACTGAGCCC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 90 bp CATCCTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTaGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAAC +
Preference number: 2 (lower is better)
Translates to: HPPQPQPDRNRQLSG*EGNTLEIAFTIHRN
Trigger: GTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR GCA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGCACCTAACCCAGACATaGCCCTTAGGGAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRHLTQT*PLGSGE
Trigger: TTCCCCACTCCCTAAGGGGCATGTCTGGGTTAGGTG...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCATGCCCCTTAGGGAGTaGGGAAAGTTTCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAMPLRE*GKFPAS
Trigger: GCTGGCAGGAAACTTTCCCCACTCCCTAAGGGGCAT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp AGGGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCTGTGAGGTTGTCCTCTaGCAGGACAGAGTATCTTTC +
Preference number: 2 (lower is better)
Translates to: RDLLHYSSYLQVPGAQCLCEVVL*QDRVSF
Trigger: GAAAGATACTCTGTCCTGCCAGAGGACAACCTCACA...GAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR CAA 90 bp AACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACACTCTaGAGATCGCCTTCACGATCCACAGAAACCCAGAGCACCACACAG +
Preference number: 2 (lower is better)
Translates to: NQTGIGSYQVWRETL*RSPSRSTETQSTTQ
Trigger: CTGTGTGGTGCTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTAAGGGAAAGAAGAGATaGCAAGAAAGGCCGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAKGKKR*QERPRK
Trigger: CTTCCTCGGCCTTTCTTGTCATCTCTTCTTTCCCTT...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGGATCTCTTTCCAGGCTaGCAGTGGTGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLDLFPG*QWWKVR
Trigger: CCTCACTTTCCACCACTGTCAGCCTGGAAAGAGATC...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACTGTGGCTCTTGTGCCTaGGTGGACCTTGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINCGSCA*VDLEAG
Trigger: CCCAGCCTCAAGGTCCACTCAGGCACAAGAGCCACA...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR GCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGAATTACTTCTGGTCCTaGACAGGGCCTGTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPENYFWS*TGPVLS
Trigger: GGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR GCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTACAGGTCTGTTTTTGTaGAGAGCACATGGACACACT +
Preference number: 2 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPTGLFL*RAHGHT
Trigger: AGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCTCCAGCTCCAGACCTaGATCTCTTTCCAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWLQLQT*ISFQAD
Trigger: GTCAGCCTGGAAAGAGATCCAGGTCTGGAGCTGGAG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATCAGTGGGAGTTGGAGTaGTCCAAGAGAAACTCTGGC +
Preference number: 2 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHQWELE*SKRNSG
Trigger: GCCAGAGTTTCTCTTGGACCACTCCAACTCCCACTG...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGAGCAAAAGGGCTCAGTaGGAGTTGGAGTGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRSKRAQ*ELEWSK
Trigger: CTTGGACCACTCCAACTCCCACTGAGCCCTTTTGCT...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTAAGACCATGAGATTGTaGAAGGCACCTGGACTTAGT +
Preference number: 2 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAKTMRL*KAPGLS
Trigger: ACTAAGTCCAGGTGCCTTCCACAATCTCATGGTCTT...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 90 bp TTGTGGAAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTaGCTAGCTGCTCATCACAGATGTAGCCTAGTTGGTCTGTATTAT +
Preference number: 2 (lower is better)
Translates to: LWKAPGLSPRRRPAA*LAAHHRCSLVGLYY
Trigger: ATAATACAGACCAACTAGGCTACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTTCCACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp CTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTTTACAAAGACACGAACTGCTGACCAAGTTCTaGCCTACTTCCTCATTACAC +
Preference number: 2 (lower is better)
Translates to: LHSALGDRRAPEALQRHELLTKF*PTSSLH
Trigger: GTGTAATGAGGAAGTAGGTCAGAACTTGGTCAGCAG...TTCGTGTCTTTGTAAAGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACGTGGGGAAAGTTTCCTaGCAGCCCAGCAGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINVGKVS*QPSSKR
Trigger: CCTTTTGCTGCTGGGCTGGCAGGAAACTTTCCCCAC...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCTATCTAGGGTACTGTaGCTCTTGTGCCTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWLSRVL*LLCLSG
Trigger: TCCACTCAGGCACAAGAGCCACAGTACCCTAGATAG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTAGCACATGGACACACTaGTTTCTGTATGGATTAACT +
Preference number: 2 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPSTWTH*FLYGLT
Trigger: AGTTAATCCATACAGAAACCAGTGTGTCCATGTGCT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 90 bp GAGGTTGTCCTCTGGCAGGACAGAGTATCTTTCCAGGCCAGGGAATaGAAGGCTGTAATTAATAGCGCTGTACAAACATCCTCATGCTTC +
Preference number: 2 (lower is better)
Translates to: EVVLWQDRVSFQARE*KAVINSAVQTSSCF
Trigger: GAAGCATGAGGATGTTTGTACAGCGCTATTAATTACAGCCTTCAATTCCCTGGCCTGGAAAGATACTCTGTCCTGCCAGAGGACAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR GCA 90 bp AAGCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCGTACAAACATCCTCATaGTTCATCAGACATTTGCCC +
Preference number: 2 (lower is better)
Translates to: KPFSTLVKSHVTASASSVVQTSS*FIRHLP
Trigger: GGGCAAATGTCTGATGAAGCATGAGGATGTTTGTAC...GACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR GCA 90 bp CCTCCTCACATTCCTCACTGCCCGGGTTCTGGGGGCCTTACTTTCTTCAACAGTAAGTTCAGAACCATCTaGAATAGCTCTATTCCATCA +
Preference number: 2 (lower is better)
Translates to: PPHIPHCPGSGGLTFFNSKFRTI*NSSIPS
Trigger: TGATGGAATAGAGCTATTGCAGATGGTTCTGAACTT...ACTGTTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR-3UTR CCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGACACTGGTTTCTGTATaGATTAACTCTGCCTTACGG +
Preference number: 2 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPETLVSV*INSALR
Trigger: CCGTAAGGCAGAGTTAATCCATACAGAAACCAGTGT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CCA 90 bp TGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGGTTACGGAAGATTGGATTTCCAAATCCCCCAGCTTTaGCCTCTTCTAGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: CQEVSESALCRGYGRLDFQIPQL*PLLGQW
Trigger: CCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTG...GAAATCCAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR CCA 90 bp GACACGAAGCATGGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAAAGAAGTCTTGCTGCATaGAAGGGCCTGCCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: DTKHGSESVVRNIVQVDKRSLAA*KGLPSL
Trigger: TAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCT...TTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCCATGCTTCGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CAA 90 bp TTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTaGCCCAAAGCAAAGTTGAGAGAACTGACCAAGTTCTCTTCAGCA +
Preference number: 2 (lower is better)
Translates to: FSSSLYHGSHQVTRF*PKAKLRELTKFSSA
Trigger: TGCTGAAGAGAACTTGGTCAGTTCTCTCAACTTTGCTTTGGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 90 bp AGTGCAGAGACATTAGTAAGGACGCAGGACAGGATGAGGGGATCCTaGGTATCAAAGTTCAGAACCATCTGCAATAGCTCTATTCCATCA +
Preference number: 2 (lower is better)
Translates to: SAETLVRTQDRMRGS*VSKFRTICNSSIPS
Trigger: TGATGGAATAGAGCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTGCGTCCTTACTAATGTCTCTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR-3UTR TCA 90 bp CGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGGTTACGGAAAAAAGCTCATCCTGCTaGCCAAGTTCTGACCTACTT +
Preference number: 2 (lower is better)
Translates to: RKQIVKKFQNLLCAGVTEKSSSC*PSSDLL
Trigger: AAGTAGGTCAGAACTTGGTCAGCAGGATGAGCTTTT...TTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR GCA 90 bp GACGCAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATTCTCCAGTTCCAACTaGAGAACAAGAATTCACAGA +
Preference number: 2 (lower is better)
Translates to: DAGQDEGILGIKVQNHLQFSSSN*RTRIHR
Trigger: TCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAA...TTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR-3UTR GCA 90 bp TATAGAAGTCTTGCTGCATGGAAGGGCCTGCCTTCCCTAGGATATGAAAACAGTATAGAAAAGACCATCTaGTCTGCTGTGGGAACTAAC +
Preference number: 2 (lower is better)
Translates to: YRSLAAWKGLPSLGYENSIEKTI*SAVGTN
Trigger: GTTAGTTCCCACAGCAGAGCAGATGGTCTTTTCTAT...ACTGTTTTCATATCCTAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CAA 90 bp AATCCTAATATAGCAGATTTTTCCGCGTCAAGCATATCCAGAGCCTaGGTGAAAGGCTCTGCCATTTTGGCTAGCATTTCTGGTGCATAT +
Preference number: 2 (lower is better)
Translates to: NPNIADFSASSISRA*VKGSAILASISGAY
Trigger: ATATGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTGCTATATTAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR TCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACTGGAGGTACTATACTTaGTACTGTGCCAAGTTTAGC +
Preference number: 2 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINWRYYT*YCAKFS
Trigger: GCTAAACTTGGCACAGTATCAAGTATAGTACCTCCA...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR TCA 90 bp TATAGAAGTCTTGCTGCATGGAAGGGCCTGCCTTCCCTAGGATATGAAAACAGTAGTTCCAAGAGAGGTTaGGGTAATCCTAATATAGCA +
Preference number: 2 (lower is better)
Translates to: YRSLAAWKGLPSLGYENSSSKRG*GNPNIA
Trigger: TGCTATATTAGGATTACCTCAACCTCTCTTGGAACT...ACTGTTTTCATATCCTAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR TCA 90 bp GAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCAAGAAAAGTTGATAGTTaGTACTTTAGCCACTCCCCA +
Preference number: 2 (lower is better)
Translates to: EQRLPSPVPTAEQEFTEPRKVDS*YFSHSP
Trigger: TGGGGAGTGGCTAAAGTATCAACTATCAACTTTTCT...TGGTTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR-3UTR GCA 90 bp ACAGTTTTCATAGAGGGTAGAGAAGAAACGCTGCATTCTTTCCAAGACGGTTTTTCAGAATCTGCTCTGTaGAGGGGTTACGGAAGATTG +
Preference number: 2 (lower is better)
Translates to: TVFIEGREETLHSFQDGFSESAL*RGYGRL
Trigger: CAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGA...AAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR CCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCAGTGTTCGAAACATCTaGGTGATAACACTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSSVRNI*VITLSK
Trigger: TTTGGAAAGTGTTATCACCCAGATGTTTCGAACACT...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR GCA 72 bp GCCAGATGGACCAGGGAAGCCATGCACCCGTCGTGCTaGCCGTGCATCTGTAAGCCTTTCAGCACACTGGTG +
Preference number: 3 (lower is better)
Translates to: ARWTREAMHPSC*PCICKPFSTLV
Trigger: CACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR CAA 90 bp TGGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTGCATCTGTAAGCCTTTCCCTGACAGCACTTGTTaGAGGAGAGGCCAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: WTREAMHPSCCPCICKPFPDSTC*RRGQQS
Trigger: GCTCTGCTGGCCTCTCCTCAAACAAGTGCTGTCAGG...GAAAGGCTTACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR GCA 72 bp AAGGCCAGATGGACCAGGGAAGCCATGCACCCGTCGTaGTGCCCGTGCATCTGTAAGCCTTTCAGCACACTG +
Preference number: 3 (lower is better)
Translates to: KARWTREAMHPS*CPCICKPFSTL
Trigger: CAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR CAA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTCTCTTGCTGCGAGCCTaGCTAGTCGCAGGGTTGGGC +
Preference number: 3 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPLLLRA*LVAGLG
Trigger: GCCCAACCCTGCGACTAGCAAGGCTCGCAGCAAGAG...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR GCA 72 bp TGGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTaGATCTGTAAGCCTTTCAGCACACTGGTGAAAAGC +
Preference number: 3 (lower is better)
Translates to: WTREAMHPSCCP*ICKPFSTLVKS
Trigger: GCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR-3UTR CAA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTTTGCTAGTCGCAGGGTaGGGCACAGCACCCTTAGTT +
Preference number: 3 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPLLVAG*GTAPLV
Trigger: AACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAA...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp AGGCCAGATGGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTGCATCTGTATTCCAGGCCAGGGAATaGAAGGCTGTAATTAATAGC +
Preference number: 3 (lower is better)
Translates to: RPDGPGKPCTRRAARASVFQARE*KAVINS
Trigger: GCTATTAATTACAGCCTTCAATTCCCTGGCCTGGAA...TACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR CCA 72 bp CCTGCCAGCCCAGCAGCAAAAGGGCTCAGTGGGAGTTaGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTT +
Preference number: 3 (lower is better)
Translates to: PASPAAKGLSGS*SGPRETLAQVV
Trigger: AACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCAACTCCCACTGAGCCCTTTTGCTGCTGGGCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp CCACAAATCCCCCAGCTTTGGCCTCTTCTAGGTCAGTaGGCCAGCAAGTTCGTTTCACCACACCCAGAATGC +
Preference number: 3 (lower is better)
Translates to: PQIPQLWPLLGQ*ASKFVSPHPEC
Trigger: GCATTCTGGGTGTGGTGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CCA 72 bp TCCGAGGATGGGGGATACCAGGGCTTCATAGTGCTCTaGGGGACAGAAGAGCACCAGAGGCTTTACAAAGAC +
Preference number: 3 (lower is better)
Translates to: SEDGGYQGFIVL*GTEEHQRLYKD
Trigger: GTCTTTGTAAAGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCATCCTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR CAA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGTTGAGGGCTGTGCTCTaGCTGCGAGCCTTGCTAGTC +
Preference number: 3 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLLRAVL*LRALLV
Trigger: GACTAGCAAGGCTCGCAGCAAGAGCACAGCCCTCAA...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGAGGGCTCAGTGGGAGTaGGAGTGGTCCAAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPERAQWE*EWSKRN
Trigger: GTTTCTCTTGGACCACTCCAACTCCCACTGAGCCCT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp AGTCCACTTCGGCTCTCGGGGAAACCCTCTTGTCAGTaGACTGGATGGACAACAGGTCTGTTTTTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: SPLRLSGKPSCQ*TGWTTGLFLCR
Trigger: TCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGGTTTCCCCGAGAGCCGAAGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp AGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTaGAGGGAAACACTCTTGAGATCGCCTTCACGATCC +
Preference number: 3 (lower is better)
Translates to: SPNQTGIGSYQV*RETLLRSPSRS
Trigger: GGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTTCCCAGCCCTGGTCCTaGGAGGTACTATACTTGATA +
Preference number: 3 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCSQPWS*EVLYLI
Trigger: TATCAAGTATAGTACCTCCAAGGACCAGGGCTGGGA...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp GCTTCCCACTGCACGAATGAAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAATCTGGAAGCTAGTTTaGGGATCCAAACGACATGCC +
Preference number: 3 (lower is better)
Translates to: ASHCTNEGEKTEQRLPSPIWKLV*GSKRHA
Trigger: GGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGAT...TGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTTCATTCGTGCAGTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR GCA 72 bp CACAGGAAGAGGGAGCAACACAAGACTCCCAACTTCTaGTTCCCCAGCTTTGCTTCTTCTCAATCTGACCCT +
Preference number: 3 (lower is better)
Translates to: HRKREQHKTPNF*FPSFASSQSDP
Trigger: AGGGTCAGATTGAGAAGAAGCAAAGCTGGGGAAGCAGAAGTTGGGAGTCTTGTGTTGCTCCCTCTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTTGCCCAAAGCAAAGTaGAGAGAACTGACCAAGTTC +
Preference number: 3 (lower is better)
Translates to: ASSQSDPACGPHQLKTVALPKAK*RELTKF
Trigger: GAACTTGGTCAGTTCTCTCAACTTTGCTTTGGGCAA...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 72 bp AGACTTCCCAGCCCTGGTCCTTGGAGGTACTATACTTaGTACTGTGCCAAGTTTAGCAGTAGCCTGTACCAT +
Preference number: 3 (lower is better)
Translates to: RLPSPGPWRYYT*YCAKFSSSLYH
Trigger: ATGGTACAGGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGCTGGGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 72 bp GCCTTTGAGAAAAGTAACCAGGGACCTGAAAGACCATaGGATTGTGGAAGGCACCTGGACTTAGTCCTAGGA +
Preference number: 3 (lower is better)
Translates to: AFEKSNQGPERP*DCGRHLDLVLG
Trigger: TCCTAGGACTAAGTCCAGGTGCCTTCCACAATCTCATGGTCTTTCAGGTCCCTGGTTACTTTTCTCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 72 bp CCCGTATCCATGTCCTCTCTTTACAGGGCCTTTCAGTaGCCTCTAGAATGGACTCACAGTACAGGTTGTGAT +
Preference number: 3 (lower is better)
Translates to: PVSMSSLYRAFQ*PLEWTHSTGCD
Trigger: ATCACAACCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGACATGGATACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR TCA 72 bp CAGATTTTTCCGCGTCAAGCATATCCAGAGCCTTGGTaGAAGGCTCTGCCATTTTGGCTAGCATTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: QIFPRQAYPEPW*KALPFWLAFLV
Trigger: CACCAGAAATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR TCA 72 bp TCGGTAGTCAGGAATATTGTTCAAGTTGACAAAGGCTaGGCTGAGAAGCTGGGTAGCAAGGTCCTCCACAGT +
Preference number: 3 (lower is better)
Translates to: SVVRNIVQVDKG*AEKLGSKVLHS
Trigger: ACTGTGGAGGACCTTGCTACCCAGCTTCTCAGCTCAGCCTTTGTCAACTTGAACAATATTCCTGACTACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR-3UTR CAA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACAGAAGACCAGCGGCTTaGCTAGCTGCTCATCACAGA +
Preference number: 3 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINRRPAA*LAAHHR
Trigger: TCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCT...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp TATAGAAGTCTTGCTGCATGGAAGGGCCTGCCTTCCCTAGGATATGAAAACAGTAAAGGCTCTGCCATTTaGGCTAGCATTTCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: YRSLAAWKGLPSLGYENSKGSAI*ASISGA
Trigger: TGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTT...ACTGTTTTCATATCCTAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR GCA 72 bp TGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTaGAGAGCACATGGACACACTGGTTTCTGTATGGAT +
Preference number: 3 (lower is better)
Translates to: CQWTGWTTGLFL*RAHGHTGFCMD
Trigger: ATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp CTAAAGGGGATGTTAGCACTAAAGACTTCCCAGCCCTaGTCCTTGGAGGTACTATACTTGATACTGTGCCAA +
Preference number: 3 (lower is better)
Translates to: LKGMLALKTSQP*SLEVLYLILCQ
Trigger: TTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGCTGGGAAGTCTTTAGTGCTAACATCCCCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp AACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTaGTTTCTGTATGGATTAACTCTGCCTTACGGCCAG +
Preference number: 3 (lower is better)
Translates to: NRSVFVQSTWTH*FLYGLTLPYGQ
Trigger: CTGGCCGTAAGGCAGAGTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CCA 72 bp TTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATaGATTAACTCTGCCTTACGGCCAGTAATAACCTCA +
Preference number: 3 (lower is better)
Translates to: FCAEHMDTLVSV*INSALRPVITS
Trigger: TGAGGTTATTACTGGCCGTAAGGCAGAGTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR-3UTR CAA 90 bp GACACGAAGCATGGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAAATAAGCGCAAGCAAATaGTCAAGAAGTTTCAGAATC +
Preference number: 3 (lower is better)
Translates to: DTKHGSESVVRNIVQVDKISASK*SRSFRI
Trigger: GATTCTGAAACTTCTTGACAATTTGCTTGCGCTTAT...TTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCCATGCTTCGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR GCA 72 bp ATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTaGAATAGCTCTATTCCATCATTAACAGGAATTTCT +
Preference number: 3 (lower is better)
Translates to: MRGSLVSKFRTI*NSSIPSLTGIS
Trigger: AGAAATTCCTGTTAATGATGGAATAGAGCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
3UTR TCA 72 bp TCTAGACAGAATAGTTTAAGCCCTAACTCCCTTTCTTaGTACTTTAGTATAATTACTTCTGGTCCTGCACAG +
Preference number: 3 (lower is better)
Translates to: SRQNSLSPNSLS*YFSIITSGPAQ
Trigger: CTGTGCAGGACCAGAAGTAATTATACTAAAGTATCAAGAAAGGGAGTTAGGGCTTAAACTATTCTGTCTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp AGGGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCGGACCAGGGAAGCCATaGACCCGTCGTGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: RDLLHYSSYLQVPGAQCLGPGKP*TRRAAR
Trigger: ACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCC...GAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTGGACCAGGGAAGCCATaGACCCGTCGTGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAGPGKP*TRRAAR
Trigger: ACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCC...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGCTTGATCCATCGCCATaGCTAGCGCCACGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTLDPSP*LAPRAE
Trigger: CTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAG...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCCCCAGCTTTGGCCTCTTCTAGGTCAGTGGGCCAGCAAGTTCGTTTCACCACACGGATCCTCCAGGCCTaGGTCACAGCTCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: PPALASSRSVGQQVRFTTRILQA*VTALLI
Trigger: GATCAGAAGAGCTGTGACCCAGGCCTGGAGGATCCG...TGTGGTGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGGCCAAAGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp GATGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCAAGTTGACAAAGGCTaGGCTGAGAAGCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: DGGYQGFIVLWGTEEHQRQVDKG*AEKLGS
Trigger: GCTACCCAGCTTCTCAGCTCAGCCTTTGTCAACTTG...CCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTAGGCCAGCAGAGCTGTaGGGTTGTCCTCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVARPAEL*GCPLAG
Trigger: TCCTGCCAGAGGACAACCTCACAGCTCTGCTGGCCT...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGCCTCACATTCCTCACTaGCCGGGTTCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTPHIPH*PGSGGL
Trigger: AAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGG...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCGTCCGTCGTGCTGCCCGTaGATCTGTAAGCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GFAPLQLLSPGTWGAVPRPSCCP*ICKPFS
Trigger: GCTGAAAGGCTTACAGATGCACGGGCAGCACGACGG...ACGAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp GCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCGTACCTGGGGCGCAGTaGCTCGTATATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AFQHTGEKPRNCICEQCPVPGAQ*LVYLEG
Trigger: GCCTTCCAGATATACGAGGCACTGCGCCCCAGGTAC...GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGAGCAGCAACTCGCGCTaGGAAGAAGCCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLSSNSR*EEAGAA
Trigger: CGCAGCGCCGGCTTCTTCCCAGCGCGAGTTGCTGCT...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTAGAAGTCTTGCTGCATaGAAGGGCCTGCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: WGIPGLHSALGDRRAPEARSLAA*KGLPSL
Trigger: TAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCT...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTAAAGAGGTCCGAGGATaGGGGATACCAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: WGIPGLHSALGDRRAPEAKEVRG*GIPGLH
Trigger: ATGAAGCCCTGGTATCCCCCATCCTCGGACCTCTTT...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCGTGGCTGCACGGGGGTaGGAGGGCTTGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAVAARG*EGLWEK
Trigger: CTTCTCCCACAAGCCCTCCCACCCCCGTGCAGCCAC...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGCTCTTGTGCCTGAGTaGACCTTGAGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETALVPE*TLRLGR
Trigger: CCTCCCCAGCCTCAAGGTCCACTCAGGCACAAGAGC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp GCTGTGCTCTTGCTGCGAGCCTTGCTAGTCGCAGGGTaGGGCACAGCACCCTTAGTTACCATTCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: AVLLLRALLVAG*GTAPLVTILYR
Trigger: CCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCTCGCAGCAAGAGCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TGCCCGTGCATCTGTAAGCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCAAGGCCAGCAGAGCTGTaGGGTTGTCCTCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPCICKPFSTLVKSHVTARPAEL*GCPLAG
Trigger: TCCTGCCAGAGGACAACCTCACAGCTCTGCTGGCCT...TGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp CTTCTCCAATCGAGACATGCCGTTCCACCGAAACCTAAACAGCATCTCTATAGGGAGAGCGCACACCACTaGAGTCCCGGGACCACGAGG +
Preference number: 4 (lower is better)
Translates to: LLQSRHAVPPKPKQHLYRESAHH*SPGTTR
Trigger: CCTCGTGGTCCCGGGACTGCAGTGGTGTGCGCTCTC...CCTATAGAGATGCTGTTTAGGTTTCGGTGGAACGGCATGTCTCGATTGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR GCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAATGCACCCGTCGTGCTaGCCGTGCATCTGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETMHPSC*PCICKP
Trigger: AGGCTTACAGATGCACGGGCAGCACGACGGGTGCAT...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCTATGCACCCGTCGTGCTaGCCGTGCATCTGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: PFSTLVKSHVTASASSVPMHPSC*PCICKP
Trigger: AGGCTTACAGATGCACGGGCAGCACGACGGGTGCAT...AGGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTTTCAGGGTTCAAAGATaGTGGCCAGGCCACCCCCAT +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPFRVQR*WPGHPH
Trigger: ATGGGGGTGGCCTGGCCACCATCTTTGAACCCTGAA...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCGGGTGGGAGGGCTTGTaGGAGAAGGGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAGWEGL*EKGCSA
Trigger: AGCAGAGCAGCCCTTCTCCCACAAGCCCTCCCACCC...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTTCTGTACAGGTATGTaGCTGCACGGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHFCTGM*LHGGGR
Trigger: CCTCCCACCCCCGTGCAGCCACATACCTGTACAGAA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp TCCTGCCAGCCCAGCAGCAAAAGGGCTCAGTGGGAGTaGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SCQPSSKRAQWE*EWSKRNSGTSS
Trigger: ACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCAACTCCCACTGAGCCCTTTTGCTGCTGGGCTGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGAGTTGGGGTCCATCATaGCCGTCACCGCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQSWGPS*PSPLSP
Trigger: TGGTGAAAGCGGTGACGGTCATGATGGACCCCAACT...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTAGCGCACACAACACCTaGCAGAGCCTCTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPSAHNT*QSLFRK
Trigger: CTTTCTGAAGAGGCTCTGTCAGGTGTTGTGTGCGCT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTCTGGCACAAGTAGTTaGGGGCTGTGCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVASGTSS*GLCSCC
Trigger: GCAGCAAGAGCACAGCCCTCAACTACTTGTGCCAGA...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACATGTGGCTCTTGTGCCTaGGTGGACCTTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTCGSCA*VDLEAG
Trigger: CCCAGCCTCAAGGTCCACTCAGGCACAAGAGCCACA...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCAGAGAGCGCACACCACTaGAGTCCCGGGACCACGAGG +
Preference number: 4 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPESAHH*SPGTTR
Trigger: CCTCGTGGTCCCGGGACTGCAGTGGTGTGCGCTCTC...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CTTCTCCAATCGAGACATGCCGTTCCACCGAAACCTAAACAGCATCTCTATAGGCTTGATCCATCGCCATaGCTAGCGCCACGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLQSRHAVPPKPKQHLYRLDPSP*LAPRAE
Trigger: CTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAG...CCTATAGAGATGCTGTTTAGGTTTCGGTGGAACGGCATGTCTCGATTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR GCA 90 bp CACTCCCCAGCCATCTGGAAGCTAGTTTTGGGATCCAAACGACATGCCAACCTCCGGGACAGGATTTCATaGCTGAAGAGGGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: HSPAIWKLVLGSKRHANLRDRIS*LKRAPQ
Trigger: TTGGGGAGCCCTCTTCAGGCATGAAATCCTGTCCCG...GAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp AAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGCCTCACATTCCTCACTaGCCGGGTTCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KVRRRNRGFLLQFQLQNKPHIPH*PGSGGL
Trigger: AAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGG...CTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTTTCATCGTCTCCATCTaGTGGGGGAGCACTACTGTG +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPFIVSI*WGSTTV
Trigger: CACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAA...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCTTCATCGTCTCCATCTaGTGGGGGAGCACTACTGTG +
Preference number: 4 (lower is better)
Translates to: AFQHTGEKPRNCICEQCPFIVSI*WGSTTV
Trigger: CACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAA...GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp CAGGGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTGAAAAGCCACGTAACTaGATCTGCGAGCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QGFAPLQLLSPGTWGAVPEKPRN*ICEQCP
Trigger: GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTC...AGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTCACCTAACCCAGACATaGCCCTTAGGGAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAHLTQT*PLGSGE
Trigger: TTCCCCACTCCCTAAGGGGCATGTCTGGGTTAGGTG...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCTCCTCACATTCCTCACTGCCCGGGTTCTGGGGGCCTTACTTTCTTCAACAGTTCACTGCCCGGGTTCTaGGGGCCTTACTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PPHIPHCPGSGGLTFFNSSLPGF*GPYFLQ
Trigger: TTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGA...ACTGTTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp CAAATCCCCCAGCTTTGGCCTCTTCTAGGTCAGTGGGCCAGCAAGTTCGTTTCAGCTGAGCTGAGAAGCTaGGTAGCAAGGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QIPQLWPLLGQWASKFVSAELRS*VARSST
Trigger: TGTGGAGGACCTTGCTACCCAGCTTCTCAGCTCAGC...TGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPGGALL*SAPFFE
Trigger: TTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCC...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAATGCCCCTTAGGGAGTaGGGAAAGTTTCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETMPLRE*GKFPAS
Trigger: GCTGGCAGGAAACTTTCCCCACTCCCTAAGGGGCAT...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTACGTGTTCCAGGATCTaGAGGCCAAAATGTCTGACG +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPTCSRI*RPKCLT
Trigger: CGTCAGACATTTTGGCCTTCAGATCCTGGAACACGT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTTCAGCGGCTCCCAACTaGAGTTCCTGTTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPSAAPN*SSCSFN
Trigger: GTTGAATGAACAGGAACTTCAGTTGGGAGCCGCTGA...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGGGTCACAGCTCTTCTaGTCTGTACCCACATACGCA +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETGSQLF*SVPTYA
Trigger: TGCGTATGTGGGTACAGATCAGAAGAGCTGTGACCC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGTGCGAGCAGTGTCCCTaGCAGCACTTGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPECEQCP*QHLFEE
Trigger: CTCCTCAAACAAGTGCTGTCAGGGACACTGCTCGCA...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCATGCTTCTTCTCAATCTaGCCCTGCCTGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPCFFSI*PCLWPA
Trigger: TGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGCA...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGGAGGGAAACACTCTTaGGATCGCCTTCACGATCCA +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETGGKHS*DRLHDP
Trigger: TGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGTGAAAAGAGGTCCGAGGATGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGAAAAGCTCATCCTGCTaGCCAAGTTCTGACCTACTT +
Preference number: 4 (lower is better)
Translates to: GEKRSEDGGYQGFIVLWGKSSSC*PSSDLL
Trigger: AAGTAGGTCAGAACTTGGTCAGCAGGATGAGCTTTT...CCCCCAGAGCACTATGAAGCCCTGGTATCCCCCATCCTCGGACCTCTTTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp GCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCGTCAGCACCCTTCTTTaGAACACAGCAAACCGCAGT +
Preference number: 4 (lower is better)
Translates to: AFQHTGEKPRNCICEQCPVSTLL*NTANRS
Trigger: ACTGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGAC...GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATATGCACACAGCTGATTaGCCAGCGCACACAACACCT +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHMHTAD*PAHTTP
Trigger: AGGTGTTGTGTGCGCTGGGCAATCAGCTGTGTGCAT...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTCGGGACAGGATTTCATaGCTGAAGAGGGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCRDRIS*LKRAPQ
Trigger: TTGGGGAGCCCTCTTCAGGCATGAAATCCTGTCCCG...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGGGATCCAAACGACATaGCAACCTCATCACCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQGIQTT*QPHHLS
Trigger: GGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCC...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCCGTCGTGCTGCCCGTaGATCTGTAAGCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAPSCCP*ICKPFS
Trigger: GCTGAAAGGCTTACAGATGCACGGGCAGCACGACGG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACGCGGGGGTGGGAAGCTaGAGGAGGAGCGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINAGVGS*RRSVSS
Trigger: GCTGCTAACGCTCCTCCTCCAGCTTCCCACCCCCGC...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGTCAGGCCAATGCTGTaGCCACTCTCGCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETVRPML*PLSLDH
Trigger: ATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGAC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTCACTCCCCAGCCATCTaGAAGCTAGTTTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAHSPAI*KLVLGS
Trigger: GGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTG...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCGGATCCTCCAGGCCTaGGTCACAGCTCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVARILQA*VTALLI
Trigger: GATCAGAAGAGCTGTGACCCAGGCCTGGAGGATCCG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTCCTCTTCTAGGTCAGTaGGCCAGCAAGTTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPPLLGQ*ASKFVS
Trigger: TGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGG...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAAGAAGTCTTGCTGCATaGAAGGGCCTGCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETRSLAA*KGLPSL
Trigger: TAGGGAAGGCAGGCCCTTCCATGCAGCAAGACTTCT...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CACCCGTCGTGCTGCCCGTGCATCTGTAAGCCTTTCAGCACACTGGTGAAAAGCTGTGAGGTTGTCCTCTaGCAGGACAGAGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: HPSCCPCICKPFSTLVKSCEVVL*QDRVSF
Trigger: GAAAGATACTCTGTCCTGCCAGAGGACAACCTCACA...GCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGCAGTGGGAGTTGGAGTaGTCCAAGAGAAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQQWELE*SKRNSG
Trigger: GCCAGAGTTTCTCTTGGACCACTCCAACTCCCACTG...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp GCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTaGCTAGCTGCTCATCACAGATGTAGCCTAGTTGGT +
Preference number: 4 (lower is better)
Translates to: APGLSPRRRPAA*LAAHHRCSLVG
Trigger: ACCAACTAGGCTACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp CAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTaGGAGGGAAACACTCTTGAGATCGCCTTCACGATC +
Preference number: 4 (lower is better)
Translates to: QPQPDRNRQLSG*EGNTLEIAFTI
Trigger: GATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAACTCCTCACAAAACTTaGGGGCTTCCAGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPTPHKT*GLPAGS
Trigger: GCTACCGGCTGGAAGCCCTCAAGTTTTGTGAGGAGT...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGAGCAATGCACACAGCTaGTTGCCCAGCGCACACAAC +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLSNAHS*LPSAHN
Trigger: GTTGTGTGCGCTGGGCAATCAGCTGTGTGCATTGCT...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGCTCCCCAAGTCATCTaGGTTGAAGAGCGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQAPQVI*VEERRN
Trigger: GTTTCTACGCTCTTCAACTCAGATGACTTGGGGAGC...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGGACGCAGGACAGGATaGGGGGATCCTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPGRRTG*GDPWYQ
Trigger: TTGATACCAAGGATCCCCTCATCCTGTCCTGCGTCC...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTCAAGTTGACAAAGGCTaGGCTGAGAAGCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCQVDKG*AEKLGS
Trigger: GCTACCCAGCTTCTCAGCTCAGCCTTTGTCAACTTG...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAGACAGTGGTGGAAAGTaGGGTGGCAGTGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTDSGGK*GGSARR
Trigger: CCTTCTTGCACTGCCACCTCACTTTCCACCACTGTC...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAACCGCTTTCACCAGCTaGTCGCACAGCGCGTTTACT +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTTAFTS*SHSAFT
Trigger: AGTAAACGCGCTGTGCGAGCAGCTGGTGAAAGCGGT...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTGTCATGGCTTCCCACTaGACGAATGAAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAVMASH*TNEGEK
Trigger: CTTCTCACCTTCATTCGTGCAGTGGGAAGCCATGAC...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CAAACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCGCCATGCACCCGTCGTaGTGCCCGTGCATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: QTGPVSPSVFQGFAPLQLAMHPS*CPCICK
Trigger: CTTACAGATGCACGGGCAGCACGACGGGTGCATGGC...GAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTATAGAAAAGACCATCTaGTCTGCTGTGGGAACTAAC +
Preference number: 4 (lower is better)
Translates to: WGIPGLHSALGDRRAPEAIEKTI*SAVGTN
Trigger: GTTAGTTCCCACAGCAGAGCAGATGGTCTTTTCTAT...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAGCTGAGCTGAGAAGCTaGGTAGCAAGGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTAELRS*VARSST
Trigger: TGTGGAGGACCTTGCTACCCAGCTTCTCAGCTCAGC...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCCCCAGCTTTGGCCTCTTCTAGGTCAGTGGGCCAGCAAGTTCGTTTCACCACACACAGCAGGCTCCTTTaGTTGATAACTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: PPALASSRSVGQQVRFTTHSRLL*LITCHF
Trigger: GAAATGGCAAGTTATCAACCAAAGGAGCCTGCTGTG...TGTGGTGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGGCCAAAGCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp GCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCAGCTTGCAGTCAAACTaGTCCAGTGAGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AFQHTGEKPRNCICEQCPSLQSN*SSESFC
Trigger: ACAGAAGGACTCACTGGACCAGTTTGACTGCAAGCT...GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTATGAGGCGTTTGAATTaGTCCTTTCGGCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPMRRLN*SFRRLS
Trigger: TGACAAGCGCCGAAAGGACCAATTCAAACGCCTCAT...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCAGGGTTCAAAGATGGTaGCCAGGCCACCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVARVQRW*PGHPHH
Trigger: ATGATGGGGGTGGCCTGGCCACCATCTTTGAACCCT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCTCCAGCTCCAGACCTaGATCTCTTTCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVALQLQT*ISFQAD
Trigger: GTCAGCCTGGAAAGAGATCCAGGTCTGGAGCTGGAG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGCTATCTAGGGTACTGTaGCTCTTGTGCCTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTLSRVL*LLCLSG
Trigger: TCCACTCAGGCACAAGAGCCACAGTACCCTAGATAG...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCACAGCGCGTTTACTTaGTCCATCGCCATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWHSAFT*SIAMPS
Trigger: GCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATGTGGCCACTCTCGCTTaGTCATTTCCACTACAATTC +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHVATLA*SFPLQF
Trigger: GAATTGTAGTGGAAATGATCAAGCGAGAGTGGCCAC...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp ATGAAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAGCGCACACAACACCTaGCAGAGCCTCTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MKVRRRNRGFLLQFQLQNSAHNT*QSLFRK
Trigger: CTTTCTGAAGAGGCTCTGTCAGGTGTTGTGTGCGCT...GTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp AAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGACAGGATTTCATGCCTaGAGAGGGCTCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: KVRRRNRGFLLQFQLQNKTGFHA*RGLPKS
Trigger: TGACTTGGGGAGCCCTCTTCAGGCATGAAATCCTGT...CTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGGAACCAGGGCTTCCATaGGGGCACACTTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLEPGLP*GHTSPF
Trigger: AAATGGAGAAGTGTGCCCTCATGGAAGCCCTGGTTC...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATGGATGCCCAAAAGCTTaGTTCAGGGTTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHGCPKA*FRVQRW
Trigger: CCATCTTTGAACCCTGAATCAAGCTTTTGGGCATCC...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGGACAACGGTGTCATGTaGCACTATCTAGGGTACTGT +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTDNGVM*HYLGYC
Trigger: ACAGTACCCTAGATAGTGTCACATGACACCGTTGTC...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGGACCTGAAAGACCATaGGATTGTGGAAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPGPERP*DCGRHL
Trigger: CAGGTGCCTTCCACAATCTCATGGTCTTTCAGGTCC...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACATCCATCAGCAGTCTGTaGGGCGGAGAGTATATAATG +
Preference number: 4 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETSISSL*GGEYIM
Trigger: CATTATATACTCTCCGCCGCACAGACTGCTGATGGA...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTCACCTCTCCTTGTTGTaGTCGGGAGGAGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCHLSLL*SGGVEE
Trigger: TTCTTCAACTCCTCCCGAGCACAACAAGGAGAGGTG...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp ATGAAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACGGGATCCAAACGACATaGCAACCTCATCACCTCTCC +
Preference number: 4 (lower is better)
Translates to: MKVRRRNRGFLLQFQLQNGIQTT*QPHHLS
Trigger: GGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCC...GTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGTCAGAATCTGCTCTGTaGAGGGGTTACGGAAGATTG +
Preference number: 4 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQSESAL*RGYGRL
Trigger: CAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGA...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCGAAAAGCCACGTAACTaGATCTGCGAGCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPEKPRN*ICEQCP
Trigger: GGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTC...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GGATTTGCTCCATTACAGCTCTTATCTCCAGGTACCTGGGGCGCAGTGCCTCGTAGGGGTTTAAAAGCTTaGAGTCAAACTGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GFAPLQLLSPGTWGAVPRRGLKA*SQTGPV
Trigger: CACTGGACCAGTTTGACTGCAAGCTTTTAAACCCCT...ACGAGGCACTGCGCCCCAGGTACCTGGAGATAAGAGCTGTAATGGAGCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCCACCTCTCCTTGTTGTaGTCGGGAGGCTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSHLSLL*SGGLTK
Trigger: CTTGGTCAAGCCTCCCGAGCACAACAAGGAGAGGTG...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACACTGGGGCAGGAACTCTaGTCTGTAGGTGACAAATGG +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTLGQEL*SVGDKW
Trigger: CCATTTGTCACCTACAGACCAGAGTTCCTGCCCCAG...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGTCACTGCCCGGGTTCTaGGGGCCTTACTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLSLPGF*GPYFLQ
Trigger: TTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGA...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGAAAGAGGTCCGAGGATaGGGGATACCAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRKEVRG*GIPGLH
Trigger: ATGAAGCCCTGGTATCCCCCATCCTCGGACCTCTTT...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATCGTCTCCATCTGCTaGGGGAGCACTACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWIVSIC*GSTTVV
Trigger: GACCACAGTAGTGCTCCCCCAGCAGATGGAGACGAT...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCTTATCTCCAGGTACCTaGGGCGCAGTGCCTCGTATA +
Preference number: 4 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPLSPGT*GAVPRI
Trigger: TATACGAGGCACTGCGCCCCAGGTACCTGGAGATAA...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATTGGTGGAAAGTGAGGTaGCAGTGCAAGAAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHWWKVR*QCKKGL
Trigger: TAGGCCCTTCTTGCACTGCCACCTCACTTTCCACCA...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGGGGCTCAGTGGGAGTTaGAGTGGTCCAAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLGLSGS*SGPRET
Trigger: AGTTTCTCTTGGACCACTCCAACTCCCACTGAGCCC...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCAGCAAAAGGGCTCAGTaGGAGTTGGAGTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVASKRAQ*ELEWSK
Trigger: CTTGGACCACTCCAACTCCCACTGAGCCCTTTTGCT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp GGAATAGGCAGCTATCAGGTTTGGAGGGAAACACTCTaGAGATCGCCTTCACGATCCACAGAAACCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GIGSYQVWRETL*RSPSRSTETQS
Trigger: GCTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp AGCGCTGTACAAACATCCTCATGCTTCATCAGACATTaGCCCAGGTCTGTAAGCTCTGCCATAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SAVQTSSCFIRH*PRSVSSAIAEG
Trigger: CCCCTCAGCTATGGCAGAGCTTACAGACCTGGGCAAATGTCTGATGAAGCATGAGGATGTTTGTACAGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR TCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCGTTCCACCGAAACTTaGCAACGTGTTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLRSTET*QRVPGS
Trigger: AGATCCTGGAACACGTTGTCAAGTTTCGGTGGAACG...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCAAGCAATGCACACAGCTaGTTGCCCAGCGCACACAAC +
Preference number: 4 (lower is better)
Translates to: EQRLPSPVPTAEQEFTEPSNAHS*LPSAHN
Trigger: GTTGTGTGCGCTGGGCAATCAGCTGTGTGCATTGCT...TGGTTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTGACTTGGATGGGTTGTaGAAGCAAGAAAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPDLDGL*KQEKIP
Trigger: TGGAATCTTTTCTTGCTTTCACAACCCATCCAAGTC...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGACAGGATTTCATGCCTaGAGAGGGCTCCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWTGFHA*RGLPKS
Trigger: TGACTTGGGGAGCCCTCTTCAGGCATGAAATCCTGT...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCATATCCAGAGCCTTGGTaGAAGGCTCTGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPYPEPW*KALPFW
Trigger: CCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATA...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGAGACAGGAGAGTCATTaGGTTCCAAGAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPERQESH*VPREVE
Trigger: CTCAACCTCTCTTGGAACTCAATGACTCTCCTGTCT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTTTACAAAGACACGAATCATATGGAGGTAGGTaGAAAGAGGTCCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: LHSALGDRRAPEALQRHESYGGR*KEVRGW
Trigger: CCATCCTCGGACCTCTTTTCACCTACCTCCATATGA...TTCGTGTCTTTGTAAAGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTAAGGGAAAGAAGAGATaGCAAGAAAGGCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WSGPRETLAQVVEGCALAKGKKR*QERPRK
Trigger: CTTCCTCGGCCTTTCTTGTCATCTCTTCTTTCCCTT...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCTACAGGGCCTTTCAGTaGCCTCTAGAATGGACTCAC +
Preference number: 4 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPYRAFQ*PLEWTH
Trigger: GTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTA...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTTCTACATCAGAATCTaGACCCAGCAATGCACACAG +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAFYIRI*TQQCTQ
Trigger: CTGTGTGCATTGCTGGGTGCAGATTCTGATGTAGAA...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTATGGAGGAACAAGCATaGCTCCTCACATTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WSGPRETLAQVVEGCALAMEEQA*LLTFLT
Trigger: AGTGAGGAATGTGAGGAGGCATGCTTGTTCCTCCAT...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTGTACAAACATCCTCATaGTTCATCAGACATTTGCCC +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPVQTSS*FIRHLP
Trigger: GGGCAAATGTCTGATGAAGCATGAGGATGTTTGTAC...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACGTACCTGGGGCGCAGTaGCTCGTATATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINVPGAQ*LVYLEG
Trigger: GCCTTCCAGATATACGAGGCACTGCGCCCCAGGTAC...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAAATTACTTCTGGTCCTaGACAGGGCCTGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTNYFWS*TGPVLS
Trigger: GGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATT...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCCACTCCCCAGCCATCTaGAAGCTAGTTTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSHSPAI*KLVLGS
Trigger: GGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTG...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp AGTAAGGACGCAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGGGGCAGGAACTCTaGTCTGTAGGTGACAAATGG +
Preference number: 4 (lower is better)
Translates to: SKDAGQDEGILGIKVQNHLGQEL*SVGDKW
Trigger: CCATTTGTCACCTACAGACCAGAGTTCCTGCCCCAG...ATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTGCGTCCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCAGAGAAAGCCAGATGCTaGCCACTGGTGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPEKARC*PLVPSA
Trigger: AGCTGATGGCACCAGTGGCCAGCATCTGGCTTTCTC...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCAAATCCCCCAGCTTTaGCCTCTTCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWQIPQL*PLLGQW
Trigger: CCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGAAGGCTCTGCCATTTTaGCTAGCATTTCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTKALPF*LAFLVH
Trigger: ATGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTT...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CAAACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCATCGTCTCCATCTGCTaGGGGAGCACTACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QTGPVSPSVFQGFAPLQLIVSIC*GSTTVV
Trigger: GACCACAGTAGTGCTCCCCCAGCAGATGGAGACGAT...GAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTTGTGAGGTTGTCCTCTaGCAGGACAGAGTATCTTTC +
Preference number: 4 (lower is better)
Translates to: WSGPRETLAQVVEGCALACEVVL*QDRVSF
Trigger: GAAAGATACTCTGTCCTGCCAGAGGACAACCTCACA...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGAGTGCCTCGTATATCTaGAAGGCCAGATGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWSASYI*KARWTR
Trigger: CCTGGTCCATCTGGCCTTCCAGATATACGAGGCACT...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTAGCTTGCAGTCAAACTaGTCCAGTGAGTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WSGPRETLAQVVEGCALASLQSN*SSESFC
Trigger: ACAGAAGGACTCACTGGACCAGTTTGACTGCAAGCT...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGTGCGCCTTTGACTCCTaGGAAGTATCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRCAFDS*EVSVFT
Trigger: AGTGAAGACAGATACTTCTCAGGAGTCAAAGGCGCA...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCGCTCCCCAAGTCATCTaGGTTGAAGAGCGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSAPQVI*VEERRN
Trigger: GTTTCTACGCTCTTCAACTCAGATGACTTGGGGAGC...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAGAAAGCATCAACATCTaGCAGCACTCTGTGCATGTC +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTESINI*QHSVHV
Trigger: GACATGCACAGAGTGCTGTCAGATGTTGATGCTTTC...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGTACCCACATACGCAATaGAAGCATCAACATCTGACA +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTYPHTQ*KHQHLT
Trigger: TGTCAGATGTTGATGCTTTCATTGCGTATGTGGGTA...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGGTCAGCACCCTTCTTTaGAACACAGCAAACCGTGAT +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLVSTLL*NTANRD
Trigger: ATCACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGAC...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCTTATCTCCATGCGAGCAGTGTCCCTaGCAGCACTTGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVSPSVFQGFAPLQLLSPCEQCP*QHLFEE
Trigger: CTCCTCAAACAAGTGCTGTCAGGGACACTGCTCGCA...TGGAGATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR TCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTGGAAGATTCTTAATGTaGACTTCTTTTCGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPGRFLM*TSFRNC
Trigger: GCAGTTCCGAAAAGAAGTTCACATTAAGAATCTTCC...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTGGAGGTACTATACTTaGTACTGTGCCAAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHWRYYT*YCAKFS
Trigger: GCTAAACTTGGCACAGTATCAAGTATAGTACCTCCA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTGTACAGGTTGTGATGTaGAGGCATGTATTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVAVQVVM*RHVFFW
Trigger: CCAAAAGAATACATGCCTTCACATCACAACCTGTAC...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTCACAGTACAGGTTGTaGTGTGAAGGCATGTATTCT +
Preference number: 4 (lower is better)
Translates to: ASSQSDPACGPHQLKTVASQYRL*CEGMYS
Trigger: AGAATACATGCCTTCACATCACAACCTGTACTGTGA...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACAGCATGTCAGGCCAATaGTGTGGCCACTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINSMSGQ*CGHSRL
Trigger: CAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCT...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATAAGACTCCCAACTTCTaGTTCCCCAGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHKTPNF*FPSFAS
Trigger: AGAAGCAAAGCTGGGGAAGCAGAAGTTGGGAGTCTT...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAAAAGCATGTCAAAATTaGGCAGCACAAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPKACQN*AAQAGG
Trigger: ACCCCCAGCTTGTGCTGCCCAATTTTGACATGCTTT...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CAAACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCAGTGCCTCGTATATCTaGAAGGCCAGATGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QTGPVSPSVFQGFAPLQLSASYI*KARWTR
Trigger: CCTGGTCCATCTGGCCTTCCAGATATACGAGGCACT...GAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGAAGACTTCCCAGCCCTaGTCCTTGGAGGTACTATAC +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWKTSQP*SLEVLY
Trigger: GTATAGTACCTCCAAGGACCAGGGCTGGGAAGTCTT...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGCTGAGGGGTCATTCATaGAAGGGCAAGATGTGTGAA +
Preference number: 4 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRLRGHS*KGKMCE
Trigger: TTCACACATCTTGCCCTTCCATGAATGACCCCTCAG...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATCTCTTGTCAGTGGACTaGATGGACAACAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHLLSVD*MDNRSV
Trigger: AACAGACCTGTTGTCCATCCAGTCCACTGACAAGAG...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGAAACCCTCTTGTCAGTaGACTGGATGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLKPSCQ*TGWTTG
Trigger: ACCTGTTGTCCATCCAGTCCACTGACAAGAGGGTTT...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGGCAGCTATCAGGTTTaGAGGGAAACACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPGSYQV*RETLLR
Trigger: TCTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCC...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp AGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTaGCCCAAAGCAAAGTTGAGAGAACTGACCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLYHGSHQVTRF*PKAKLRELTKF
Trigger: GAACTTGGTCAGTTCTCTCAACTTTGCTTTGGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAAGGCCAAAATGTCTaGCGATGGCAACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPEGQNV*RWQLVF
Trigger: AAACACAAGTTGCCATCGTCAGACATTTTGGCCTTC...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGGTCAAACTGGTCCAGTaGGTCCTTCTGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWVKLVQ*VLLYFR
Trigger: CCTGAAATACAGAAGGACTCACTGGACCAGTTTGAC...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp ATGAAGGTGAGAAGACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACTTCTACATCAGAATCTaGACCCAGCAATGCACACAG +
Preference number: 4 (lower is better)
Translates to: MKVRRRNRGFLLQFQLQNFYIRI*TQQCTQ
Trigger: CTGTGTGCATTGCTGGGTGCAGATTCTGATGTAGAA...GTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGTCTTCTCACCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTTCTCCAGTTCCAACTaGAGAACAAGAATTCACAGA +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHFSSSN*RTRIHR
Trigger: TCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCAGCATCAAGGTCATGGCTTCCCACTaGACGAATGAAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASFSSSNCRTRIHRTSIKVMASH*TNEGEK
Trigger: CTTCTCACCTTCATTCGTGCAGTGGGAAGCCATGAC...CTTGATGCTGGTTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGTCACCACACCCAGAATaGTGTATACACAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPESPHPE*CIHKSS
Trigger: TGAGCTTTTGTGTATACAGCATTCTGGGTGTGGTGA...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CCAAATCTCCAAGTAGAATGGGAACTATCTGGGACATCTAGACAGAATAGTTTAGCCATGCACCCGTCGTaGTGCCCGTGCATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: PNLQVEWELSGTSRQNSLAMHPS*CPCICK
Trigger: CTTACAGATGCACGGGCAGCACGACGGGTGCATGGC...TAAACTATTCTGTCTAGATGTCCCAGATAGTTCCCATTCTACTTGGAGATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAACAGGTCTGTTTTTGTaGAGAGCACATGGACACACT +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPTGLFL*RAHGHT
Trigger: AGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGT...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGTCTGTAGGTGACAAATaGAAAGAGTGCAGAGACATT +
Preference number: 4 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTSVGDK*KECRDI
Trigger: AATGTCTCTGCACTCTTTCCATTTGTCACCTACAGA...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACATCAGGAGTAGCTCATTaGAGAGGAGTTGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTSGVAH*RGVASH
Trigger: ATGTGAAGCAACTCCTCTCCAATGAGCTACTCCTGA...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTGCATATAATGTATTGTaGGTTCTTATAAGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPAYNVL*VLISAS
Trigger: GCTTGCGCTTATAAGAACCCACAATACATTATATGC...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCACAGCAGGCTCCTTTaGTTGATAACTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAHSRLL*LITCHF
Trigger: GAAATGGCAAGTTATCAACCAAAGGAGCCTGCTGTG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATAGCACATGGACACACTaGTTTCTGTATGGATTAACT +
Preference number: 4 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHSTWTH*FLYGLT
Trigger: AGTTAATCCATACAGAAACCAGTGTGTCCATGTGCT...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GACACGAAGCATGGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAATATCCAGAGCCTTGGTaGAAGGCTCTGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: DTKHGSESVVRNIVQVDKYPEPW*KALPFW
Trigger: CCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATA...TTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCCATGCTTCGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTAGTTCCAAGAGAGGTTaGGGTAATCCTAATATAGCA +
Preference number: 4 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCSSKRG*GNPNIA
Trigger: TGCTATATTAGGATTACCTCAACCTCTCTTGGAACT...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACCACGAAGCATGGGTCTaGGTCGGTAGTCAGGAATAT +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINHEAWV*VGSQEY
Trigger: ATATTCCTGACTACCGACTCAGACCCATGCTTCGTG...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACTCATATGGAGGTAGGTaGAAAGAGGTCCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINSYGGR*KEVRGW
Trigger: CCATCCTCGGACCTCTTTTCACCTACCTCCATATGA...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCAGTCACTACATCCTCTaGCAGTCGCAAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVASHYIL*QSQKDK
Trigger: TTTATCCTTTTGCGACTGGCAGAGGATGTAGTGACT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CACTCCCCAGCCATCTGGAAGCTAGTTTTGGGATCCAAACGACATGCCAACCTCAAGTTCAGAACCATCTaGAATAGCTCTATTCCATCA +
Preference number: 4 (lower is better)
Translates to: HSPAIWKLVLGSKRHANLKFRTI*NSSIPS
Trigger: TGATGGAATAGAGCTATTGCAGATGGTTCTGAACTT...GAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp CGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGGTTACGGAATCAGAATCTGCTCTGTaGAGGGGTTACGGAAGATTG +
Preference number: 4 (lower is better)
Translates to: RKQIVKKFQNLLCAGVTESESAL*RGYGRL
Trigger: CAATCTTCCGTAACCCCTGCACAGAGCAGATTCTGA...TTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGGTGTTTCCCCTTGTTTaGAAAGAGTGTCCAATTCTA +
Preference number: 4 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPEVFPLV*KECPIL
Trigger: TAGAATTGGACACTCTTTCCAAACAAGGGGAAACAC...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCGGGGTTACGGAAGATTaGATTTCCACTGGATGTATA +
Preference number: 4 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPGVTED*ISTGCI
Trigger: TATACATCCAGTGGAAATCCAATCTTCCGTAACCCC...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCACATCTCTTGAGACTCTaGGTTTTCATCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPHLLRL*VFICSL
Trigger: GAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATG...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGAATCTCCAAGTAGAATaGGAACTATCTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPENLQVE*ELSGTS
Trigger: AGATGTCCCAGATAGTTCCCATTCTACTTGGAGATT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp TCCCATCAGGTGACCAGATTCTTGCCCAAAGCAAAGTaGAGAGAACTGACCAAGTTCTCTTCAGCACTTAGC +
Preference number: 4 (lower is better)
Translates to: SHQVTRFLPKAK*RELTKFSSALS
Trigger: GCTAAGTGCTGAAGAGAACTTGGTCAGTTCTCTCAACTTTGCTTTGGGCAAGAATCTGGTCACCTGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
3UTR CAA 72 bp CTCTGGCAGGACAGAGTATCTTTCCAGGCCAGGGAATaGAAGGCTGTAATTAATAGCGCTGTACAAACATCC +
Preference number: 4 (lower is better)
Translates to: LWQDRVSFQARE*KAVINSAVQTS
Trigger: GGATGTTTGTACAGCGCTATTAATTACAGCCTTCAATTCCCTGGCCTGGAAAGATACTCTGTCCTGCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR TCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCGACTTGGATGGGTTGTaGAAGCAAGAAAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSDLDGL*KQEKIP
Trigger: TGGAATCTTTTCTTGCTTTCACAACCCATCCAAGTC...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCAGAAAAGTTGATAGTTaGTACTTTAGCCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPRKVDS*YFSHSP
Trigger: TGGGGAGTGGCTAAAGTATCAACTATCAACTTTTCT...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GACACGAAGCATGGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAAAGACAGGAGAGTCATTaGGTTCCAAGAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: DTKHGSESVVRNIVQVDKRQESH*VPREVE
Trigger: CTCAACCTCTCTTGGAACTCAATGACTCTCCTGTCT...TTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCCATGCTTCGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp AACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCTTGTCAAACTGGTCCAGTaGGTCCTTCTGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: NWSSESFCISGICSITALVKLVQ*VLLYFR
Trigger: CCTGAAATACAGAAGGACTCACTGGACCAGTTTGAC...AAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR TCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGTGTATTATCCTTGGATaGCAACGGTGTCATGTGACA +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWCIILG*QRCHVT
Trigger: TGTCACATGACACCGTTGTCATCCAAGGATAATACA...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GACACGAAGCATGGGTCTGAGTCGGTAGTCAGGAATATTGTTCAAGTTGACAAACTGCTGACCAAGTTCTaGCCTACTTCCTCATTACAC +
Preference number: 4 (lower is better)
Translates to: DTKHGSESVVRNIVQVDKLLTKF*PTSSLH
Trigger: GTGTAATGAGGAAGTAGGTCAGAACTTGGTCAGCAG...TTTGTCAACTTGAACAATATTCCTGACTACCGACTCAGACCCATGCTTCGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR GCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCTTCTGGGTTAATGTTTaGTGGATGTCCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAFWVNV*WMSLLL
Trigger: AAGAAGAAGGGACATCCAGCAAACATTAACCCAGAA...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAGACAAATGGAAAGAGTaGAGAGACATTAGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTDKWKE*RDISKD
Trigger: GTCCTTACTAATGTCTCTGCACTCTTTCCATTTGTC...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp GACGCAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAAGACAAATGGAAAGAGTaGAGAGACATTAGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: DAGQDEGILGIKVQNHLQDKWKE*RDISKD
Trigger: GTCCTTACTAATGTCTCTGCACTCTTTCCATTTGTC...TTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACTTGTCAGCCACTTTCTaGAGGGAGGGGTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINLSATF*REGFKS
Trigger: GCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGACAA...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCATCCTTTCCATGTTCTaGGTTAATGTTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAILSMF*VNVCWM
Trigger: CATCCAGCAAACATTAACCCAGAACATGGAAAGGAT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAAGATTGGATTTCCACTaGATGTATAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPRLDFH*MYNPPQ
Trigger: TTGTGGTGGGTTATACATCCAGTGGAAATCCAATCT...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AGGGAATTGAAGGCTGTAATTAATAGCGCTGTACAAACATCCTCATGCTTCATCGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RELKAVINSAVQTSSCFIGGALL*SAPFFE
Trigger: TTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCC...GATGAAGCATGAGGATGTTTGTACAGCGCTATTAATTACAGCCTTCAATTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486936.2
3UTR CAA 72 bp ATAGCAGATTTTTCCGCGTCAAGCATATCCAGAGCCTaGGTGAAAGGCTCTGCCATTTTGGCTAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: IADFSASSISRA*VKGSAILASIS
Trigger: AGAAATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp CACTACAATTCGAGACAGAGCATCTTTAATATGGTTCTCCTCTTCCAAAATGTTCACAGCGCGTTTACTTaGTCCATCGCCATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: HYNSRQSIFNMVLLFQNVHSAFT*SIAMPS
Trigger: GCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTG...AACATTTTGGAAGAGGAGAACCATATTAAAGATGCTCTGTCTCGAATTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR TCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACTTTTCAGCAGTGATGTaGCTCATAGACACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINFSAVM*LIDTQS
Trigger: TGACTGGGTGTCTATGAGTCACATCACTGCTGAAAA...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCAGAAAAGTTGATAGTTaGTACTTTAGCCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSRKVDS*YFSHSP
Trigger: TGGGGAGTGGCTAAAGTATCAACTATCAACTTTTCT...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp ACAGGAATTTCTTCTCTATTTAGTGTTCGAAACATCTGGGTGATAACACTTTCCGGACGCAGGACAGGATaGGGGGATCCTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: TGISSLFSVRNIWVITLSGRRTG*GDPWYQ
Trigger: TTGATACCAAGGATCCCCTCATCCTGTCCTGCGTCC...GGAAAGTGTTATCACCCAGATGTTTCGAACACTAAATAGAGAAGAAATTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR TCA 90 bp CTACTTCCTCATTACACCTTCAGTCTTCAGAGCTATTTAGAGATCCTTAAAGCCCACGAAGCATGGGTCTaGGTCGGTAGTCAGGAATAT +
Preference number: 4 (lower is better)
Translates to: LLPHYTFSLQSYLEILKAHEAWV*VGSQEY
Trigger: ATATTCCTGACTACCGACTCAGACCCATGCTTCGTG...GGCTTTAAGGATCTCTAAATAGCTCTGAAGACTGAAGGTGTAATGAGGAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR GCA 90 bp AATTCACAGAACCAGCATCAAGAAAAGTTGATAGTTGATACTTTAGCCACTCCCATGCACACAGCTGATTaGCCAGCGCACACAACACCT +
Preference number: 4 (lower is better)
Translates to: NSQNQHQEKLIVDTLATPMHTAD*PAHTTP
Trigger: AGGTGTTGTGTGCGCTGGGCAATCAGCTGTGTGCAT...GGGAGTGGCTAAAGTATCAACTATCAACTTTTCTTGATGCTGGTTCTGTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR GCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCAAGTTCAGAACCATCTaGAATAGCTCTATTCCATCA +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAKFRTI*NSSIPS
Trigger: TGATGGAATAGAGCTATTGCAGATGGTTCTGAACTT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CTCTGGCAGGACAGAGTATCTTTCCAGGCCAGGGAATTGAAGGCTGTAATTAATGTACAAACATCCTCATaGTTCATCAGACATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LWQDRVSFQARELKAVINVQTSS*FIRHLP
Trigger: GGGCAAATGTCTGATGAAGCATGAGGATGTTTGTAC...ATTAATTACAGCCTTCAATTCCCTGGCCTGGAAAGATACTCTGTCCTGCCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACAGGGGTTTAAAAGCTTaGAGTCAAACTGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINRGLKA*SQTGPV
Trigger: CACTGGACCAGTTTGACTGCAAGCTTTTAAACCCCT...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp ACAGTTTTCATAGAGGGTAGAGAAGAAACGCTGCATTCTTTCCAAGACGGTTTTCCTCTTCTAGGTCAGTaGGCCAGCAAGTTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVFIEGREETLHSFQDGFPLLGQ*ASKFVS
Trigger: TGAAACGAACTTGCTGGCCCACTGACCTAGAAGAGG...AAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp AGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCTTATCTCCAGGCACAGCAGGCTCCTTTaGTTGATAACTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SESFCISGICSITALISRHSRLL*LITCHF
Trigger: GAAATGGCAAGTTATCAACCAAAGGAGCCTGCTGTG...CCTGGAGATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp TTGAAGGCTGTAATTAATAGCGCTGTACAAACATCCTCATGCTTCATCAGACATTTATCTCCAGGTACCTaGGGCGCAGTGCCTCGTATA +
Preference number: 4 (lower is better)
Translates to: LKAVINSAVQTSSCFIRHLSPGT*GAVPRI
Trigger: TATACGAGGCACTGCGCCCCAGGTACCTGGAGATAA...ATGTCTGATGAAGCATGAGGATGTTTGTACAGCGCTATTAATTACAGCCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CCA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCAACACTGGTTTCTGTATaGATTAACTCTGCCTTACGG +
Preference number: 4 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPTLVSV*INSALR
Trigger: CCGTAAGGCAGAGTTAATCCATACAGAAACCAGTGT...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GAAACGCTGCATTCTTTCCAAGACGGTTTTGAAGACAGGAGAGTCATTGAGTTCCCATCTGCTCTGCTGTaGGAACTAACTCAAGAATTC +
Preference number: 4 (lower is better)
Translates to: ETLHSFQDGFEDRRVIEFPSALL*ELTQEF
Trigger: GAATTCTTGAGTTAGTTCCCACAGCAGAGCAGATGG...GAACTCAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAGAATGCAGCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CAA 72 bp GTAGAGAAGAAACGCTGCATTCTTTCCAAGACGGTTTaGAAGACAGGAGAGTCATTGAGTTCCAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VEKKRCILSKTV*KTGESLSSKRG
Trigger: ACCTCTCTTGGAACTCAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp TACAATTCGAGACAGAGCATCTTTAATATGGTTCTCCTCTTCCAAAATGTTCAAAGTTGGGGTCCATCATaGCCGTCACCGCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: YNSRQSIFNMVLLFQNVQSWGPS*PSPLSP
Trigger: TGGTGAAAGCGGTGACGGTCATGATGGACCCCAACT...TTGAACATTTTGGAAGAGGAGAACCATATTAAAGATGCTCTGTCTCGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR GCA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCACTGACATGCAGATGTaGTTTAGAGTTAATGTTTCT +
Preference number: 4 (lower is better)
Translates to: ALVLGGTILDTVPSLAVATDMQM*FRVNVS
Trigger: AGAAACATTAACTCTAAAGCACATCTGCATGTCAGT...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGAGTGTTCGAAACATCTaGGTGATAACACTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWSVRNI*VITLSK
Trigger: TTTGGAAAGTGTTATCACCCAGATGTTTCGAACACT...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CCA 90 bp AAATGGAAAGAGTGCAGAGACATTAGTAAGGACGCAGGACAGGATGAGGGGATCAGTGTTCGAAACATCTaGGTGATAACACTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: KWKECRDISKDAGQDEGISVRNI*VITLSK
Trigger: TTTGGAAAGTGTTATCACCCAGATGTTTCGAACACT...GATCCCCTCATCCTGTCCTGCGTCCTTACTAATGTCTCTGCACTCTTTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp GAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCATCTGTAGGTGACAAATaGAAAGAGTGCAGAGACATT +
Preference number: 4 (lower is better)
Translates to: EQRLPSPVPTAEQEFTEPSVGDK*KECRDI
Trigger: AATGTCTCTGCACTCTTTCCATTTGTCACCTACAGA...TGGTTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CCA 90 bp CCTCATTACACCTTCAGTCTTCAGAGCTATTTAGAGATCCTTAAAGCCAAAATACAAATCCCCCAGCTTTaGCCTCTTCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PHYTFSLQSYLEILKAKIQIPQL*PLLGQW
Trigger: CCACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTG...TATTTTGGCTTTAAGGATCTCTAAATAGCTCTGAAGACTGAAGGTGTAATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp AGGGAATTGAAGGCTGTAATTAATAGCGCTGTACAAACATCCTCATGCTTCATCCATCTCTTGAGACTCTaGGTTTTCATCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RELKAVINSAVQTSSCFIHLLRL*VFICSL
Trigger: GAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATG...GATGAAGCATGAGGATGTTTGTACAGCGCTATTAATTACAGCCTTCAATTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR TCA 90 bp CACTACAATTCGAGACAGAGCATCTTTAATATGGTTCTCCTCTTCCAAAATGTTACGTGTTCCAGGATCTaGAGGCCAAAATGTCTGACG +
Preference number: 4 (lower is better)
Translates to: HYNSRQSIFNMVLLFQNVTCSRI*RPKCLT
Trigger: CGTCAGACATTTTGGCCTTCAGATCCTGGAACACGT...AACATTTTGGAAGAGGAGAACCATATTAAAGATGCTCTGTCTCGAATTGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR TCA 90 bp CCAAATCTCCAAGTAGAATGGGAACTATCTGGGACATCTAGACAGAATAGTTTAGTTTGCTTGCGCCTTTaGCTCCTGAGAAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: PNLQVEWELSGTSRQNSLVCLRL*LLRSIC
Trigger: ACAGATACTTCTCAGGAGTCAAAGGCGCAAGCAAAC...TAAACTATTCTGTCTAGATGTCCCAGATAGTTCCCATTCTACTTGGAGATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR TCA 90 bp GCTGTATACACAAAAGCTCATCCTGCTGACCAAGTTCTGACCTACTTCCTCATTAGTTCCAAGAGAGGTTaGGGTAATCCTAATATAGCA +
Preference number: 4 (lower is better)
Translates to: AVYTKAHPADQVLTYFLISSKRG*GNPNIA
Trigger: TGCTATATTAGGATTACCTCAACCTCTCTTGGAACT...AATGAGGAAGTAGGTCAGAACTTGGTCAGCAGGATGAGCTTTTGTGTATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR GCA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACGTTCAATGTTCCATTTaGAATCAGCTCCATGACACT +
Preference number: 4 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINVQCSI*NQLHDT
Trigger: AGTGTCATGGAGCTGATTGCAAATGGAACATTGAAC...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR GCA 90 bp CTACTTCCTCATTACACCTTCAGTCTTCAGAGCTATTTAGAGATCCTTAAAGCCTCACCACACCCAGAATaGTGTATACACAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLPHYTFSLQSYLEILKASPHPE*CIHKSS
Trigger: TGAGCTTTTGTGTATACAGCATTCTGGGTGTGGTGA...GGCTTTAAGGATCTCTAAATAGCTCTGAAGACTGAAGGTGTAATGAGGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp ATTGTGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCAAGGCTCTGCCATTTTaGCTAGCATTTCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: IVGSYKRKQIVKKFQNLLKALPF*LAFLVH
Trigger: ATGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTT...GAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp TATATAAGATATAAAGATCTGTTCTCTCAGACTTCAGTGGTAATGTCCAAGAGCCAAGAGCTCCTTACTTaGCAACGTGTTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YIRYKDLFSQTSVVMSKSQELLT*QRVPGS
Trigger: AGATCCTGGAACACGTTGTCAAGTAAGGAGCTCTTG...GCTCTTGGACATTACCACTGAAGTCTGAGAGAACAGATCTTTATATCTTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR CCA 90 bp TTGTGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTGGGGTTACGGAAGATTaGATTTCCACTGGATGTATA +
Preference number: 4 (lower is better)
Translates to: LWVLISASKLSRSFRICSGVTED*ISTGCI
Trigger: TATACATCCAGTGGAAATCCAATCTTCCGTAACCCC...AGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
3UTR CAA 72 bp TATAATGTATTGTGGGTTCTTATAAGCGCAAGCAAATaGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: YNVLWVLISASK*SRSFRICSVQG
Trigger: CCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAATACATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR TCA 90 bp CCGTTCCACCGAAACCTAAACAGCATCTCTATAGGTTATATAAGATATAAAGATGAAGGCCAAAATGTCTaGCGATGGCAACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PFHRNLNSISIGYIRYKDEGQNV*RWQLVF
Trigger: AAACACAAGTTGCCATCGTCAGACATTTTGGCCTTC...ATCTTTATATCTTATATAACCTATAGAGATGCTGTTTAGGTTTCGGTGGAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR CCA 90 bp TTGTGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTAGATTGGATTTCCACTaGATGTATAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: LWVLISASKLSRSFRICSRLDFH*MYNPPQ
Trigger: TTGTGGTGGGTTATACATCCAGTGGAAATCCAATCT...AGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CCA 90 bp CTACTTCCTCATTACACCTTCAGTCTTCAGAGCTATTTAGAGATCCTTAAAGCCGCATATAATGTATTGTaGGTTCTTATAAGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLPHYTFSLQSYLEILKAAYNVL*VLISAS
Trigger: GCTTGCGCTTATAAGAACCCACAATACATTATATGC...GGCTTTAAGGATCTCTAAATAGCTCTGAAGACTGAAGGTGTAATGAGGAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR GCA 90 bp CACTACAATTCGAGACAGAGCATCTTTAATATGGTTCTCCTCTTCCAAAATGTTGTTCAATGTTCCATTTaGAATCAGCTCCATGACACT +
Preference number: 4 (lower is better)
Translates to: HYNSRQSIFNMVLLFQNVVQCSI*NQLHDT
Trigger: AGTGTCATGGAGCTGATTGCAAATGGAACATTGAAC...AACATTTTGGAAGAGGAGAACCATATTAAAGATGCTCTGTCTCGAATTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR GCA 90 bp GGAATTTCTTCTCTATTTAGTGTTCGAAACATCTGGGTGATAACACTTTCCAAATTCTCCAGTTCCAACTaGAGAACAAGAATTCACAGA +
Preference number: 4 (lower is better)
Translates to: GISSLFSVRNIWVITLSKFSSSN*RTRIHR
Trigger: TCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAA...TTTGGAAAGTGTTATCACCCAGATGTTTCGAACACTAAATAGAGAAGAAATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS CCA 90 bp CCCGGGACCACGAGGCACGACAGCTCCCTCGGCGAGACCACCCGTTaGTACCGGGCCGCGGCGGGCGGCGGGGGTGGGAAGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGTTRHDSSLGETTR*YRAAAGGGGGKLEE
Trigger: CTCCTCCAGCTTCCCACCCCCGCCGCCCGCCGCGGCCCGGTACCAACGGGTGGTCTCGCCGAGGGAGCTGTCGTGCCTCGTGGTCCCGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 90 bp CCACCCGTTGGTACCGGGCCGCGGCGGGCGGCGGGGGTGGGAAGCTaGAGGAGGAGCGTTAGCAGCAACTCGCGCTGGGAAGAAGCCGGC +
Preference number: 5 (lower is better)
Translates to: PPVGTGPRRAAGVGS*RRSVSSNSRWEEAG
Trigger: GCCGGCTTCTTCCCAGCGCGAGTTGCTGCTAACGCTCCTCCTCCAGCTTCCCACCCCCGCCGCCCGCCGCGGCCCGGTACCAACGGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS GCA 90 bp GATCCATCGCCATGCCTAGCGCCACGCGCCGAGAGCGCACACCACTaGAGTCCCGGGACCACGAGGCACGACAGCTCCCTCGGCGAGACC +
Preference number: 5 (lower is better)
Translates to: DPSPCLAPRAESAHH*SPGTTRHDSSLGET
Trigger: GGTCTCGCCGAGGGAGCTGTCGTGCCTCGTGGTCCCGGGACTGCAGTGGTGTGCGCTCTCGGCGCGTGGCGCTAGGCATGGCGATGGATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS GCA 90 bp CTTTCACCAGCTGCTCGCACAGCGCGTTTACTTGATCCATCGCCATaGCTAGCGCCACGCGCCGAGAGCGCACACCACTGCAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: LSPAARTARLLDPSP*LAPRAESAHHCSPG
Trigger: CCCGGGACTGCAGTGGTGTGCGCTCTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTGCGAGCAGCTGGTGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS TCA 90 bp ATGACCGTCACCGCTTTCACCAGCTGCTCGCACAGCGCGTTTACTTaGTCCATCGCCATGCCTAGCGCCACGCGCCGAGAGCGCACACCA +
Preference number: 5 (lower is better)
Translates to: MTVTAFTSCSHSAFT*SIAMPSATRRERTP
Trigger: TGGTGTGCGCTCTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTGCGAGCAGCTGGTGAAAGCGGTGACGGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS CCA 90 bp ACTACCACAACAGCCACCTCAGGCCCACTGATCCCAACCTGTCTCTaGCCAGGTGAGGAAGGAGGAAGATGGGGGTACCGTCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TTTTATSGPLIPTCL*PGEEGGRWGYRPRH
Trigger: GTGCCTTGGACGGTACCCCCATCTTCCTCCTTCCTCACCTGGCCAGAGACAGGTTGGGATCAGTGGGCCTGAGGTGGCTGTTGTGGTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488195.6
CDS CCA 90 bp AAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCTGACAGCACCTaGGGAGACAACTGTGCTTTAGGGCCACAGGGGGCCTCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: KSHVTASASSVPDST*GDNCALGPQGASLK
Trigger: CTTGAGAGAGGCCCCCTGTGGCCCTAAAGCACAGTTGTCTCCCCAGGTGCTGTCAGGGACACTGCTCGCAGATGCAGTTACGTGGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS-3UTR CAA 90 bp CCGTCGTGCTGCCCGTGCATCTGTAAGCCTTTCAGCACACTGGTGAAAAGCCACCACAGCAAACCGCAGTaGCTCCTCCAGCATCTCTTG +
Preference number: 5 (lower is better)
Translates to: PSCCPCICKPFSTLVKSHHSKPQ*LLQHLL
Trigger: CAAGAGATGCTGGAGGAGCAACTGCGGTTTGCTGTG...GTGGCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAGCACGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS GCA 90 bp CCACTCCCCAGCCATCTGGAAGCTAGTTTTGGGATCCAAACGACATaGCAACCTCATCACCTCTCCTTGTTGTGCTCGGGAGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: PLPSHLEASFGIQTT*QPHHLSLLCSGGLT
Trigger: GGTCAAGCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CAA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTAGCATATCCAGAGCCTaGGTGAAAGGCTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: WGIPGLHSALGDRRAPEASISRA*VKGSAI
Trigger: AATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCT...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCTCTTGCTGCGAGCCTaGCTAGTCGCAGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ALVLGGTILDTVPSLAVALLLRA*LVAGLG
Trigger: GCCCAACCCTGCGACTAGCAAGGCTCGCAGCAAGAG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS GCA 90 bp CAGGCCTGGCTTGGGGAGGCTAAACACCAGGGATCTGCATCAGTGTaGCTACTATGTGTTTTCCTGAGAGCTCCTGCCTATGCTGGTATG +
Preference number: 5 (lower is better)
Translates to: QAWLGEAKHQGSASV*LLCVFLRAPAYAGM
Trigger: CATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGATGCAGATCCCTGGTGTTTAGCCTCCCCAAGCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS-3UTR CAA 90 bp AAGCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCATCTGCGAGCAGTGTCCCTGACAGCACTTGTTaGAGGAGAGGCCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KPFSTLVKSHVTASASSVPDSTC*RRGQQS
Trigger: GCTCTGCTGGCCTCTCCTCAAACAAGTGCTGTCAGG...GACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp AGAGTCATGGCTTCCCACTGCACGAATGAAGGTGAGAAGACGGAACAGAGGCTTCATCACCTCTCCTTGTaGTGCTCGGGAGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: RVMASHCTNEGEKTEQRLHHLSL*CSGGLT
Trigger: GGTCAAGCCTCCCGAGCACAACAAGGAGAGGTGATG...AAGCCTCTGTTCCGTCTTCTCACCTTCATTCGTGCAGTGGGAAGCCATGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS GCA 90 bp CCACTCCCCAGCCATCTGGAAGCTAGTTTTGGGATCCAAACGACATaGCAACCTCATCACCTCTCCTTGTTGTGCTCGGGAGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: PLPSHLEASFGIQTT*QPHHLSLLCSGGVE
Trigger: TTCAACTCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000424378.2
CDS CCA 90 bp CAACATCTGACAGCACTCTGTGCATGTCTTGAGAAAGCCAGATGCTaGCCACTGGTGCCATCAGCTCCTCTAGGAACACCTTCTGACGCT +
Preference number: 5 (lower is better)
Translates to: QHLTALCACLEKARC*PLVPSAPLGTPSDA
Trigger: AGCGTCAGAAGGTGTTCCTAGAGGAGCTGATGGCACCAGTGGCCAGCATCTGGCTTTCTCAAGACATGCACAGAGTGCTGTCAGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000513451.1
CDS CCA 90 bp TCTCCCAAGGGTTTCCCAATGCAACCAGCAATGAGGCGTTTGAATTaGTCCTTTCGGCGCTTGTCAGCCACTTTCTGCAGGGAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: SPKGFPMQPAMRRLN*SFRRLSATFCREGF
Trigger: AAACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGGAAACCCTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS-3UTR CAA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCCGTTCCACCGAAACTaGACAACGTGTTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHPFHRN*TTCSRI
Trigger: GATCCTGGAACACGTTGTCAAGTTTCGGTGGAACGG...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AGCATGCCTCCTCACATTCCTCACTGCCCGGGTTCTGGGGGCCTTACTTTCTTCATCTGGAAGCTAGTTTaGGGATCCAAACGACATGCC +
Preference number: 5 (lower is better)
Translates to: SMPPHIPHCPGSGGLTFFIWKLV*GSKRHA
Trigger: GGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGAT...GAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGGAGGCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CAA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGCACTCTGTGCATGTCTaGAGAAAGCCAGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQHSVHV*RKPDAG
Trigger: GCCAGCATCTGGCTTTCTCAAGACATGCACAGAGTG...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTCTTTCCAAGACGGTTTaGAAGACAGGAGAGTCATTG +
Preference number: 5 (lower is better)
Translates to: WGIPGLHSALGDRRAPEALSKTV*KTGESL
Trigger: CAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAG...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGCACAGTATAGAAGTCTaGCTGCATGGAAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQHSIEV*LHGRAC
Trigger: GCAGGCCCTTCCATGCAGCAAGACTTCTATACTGTG...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AGGCCAGATGGACCAGGGAAGCCATGCACCCGTCGTGCTGCCCGTGCATCTGTACTGTATTTCAGGGATTaGCTCCATTACAGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: RPDGPGKPCTRRAARASVLYFRD*LHYSSY
Trigger: ATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAG...TACAGATGCACGGGCAGCACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp TCAGGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCATGGTCCTTTCGGCGCTaGTCAGCCACTTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SGLEGNTLEIAFTIHRNPWSFRR*SATFCR
Trigger: CCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCA...TGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp CGGTTTAAGCCACACGGATCCTCCAGGCCTGGGTCACAGCTCTTCTaGTCTGTACCCACATACGCAATGAAAGCATCAACATCTGACAGC +
Preference number: 5 (lower is better)
Translates to: RFKPHGSSRPGSQLF*SVPTYAMKASTSDS
Trigger: GCTGTCAGATGTTGATGCTTTCATTGCGTATGTGGGTACAGATCAGAAGAGCTGTGACCCAGGCCTGGAGGATCCGTGTGGCTTAAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp GTACTAGGAGCCCTCCCACCTCCACATAATGCCCATGCCCATGGCTaGTCTTCTAGAGATGCACTCAAGCTGTACATGAGGGAAATGGGA +
Preference number: 5 (lower is better)
Translates to: VLGALPPPHNAHAHG*SSRDALKLYMREMG
Trigger: TCCCATTTCCCTCATGTACAGCTTGAGTGCATCTCTAGAAGATCAGCCATGGGCATGGGCATTATGTGGAGGTGGGAGGGCTCCTAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS GCA 90 bp GGGATCTGCATCAGTGTGCCTACTATGTGTTTTCCTGAGAGCTCCTaGCTATGCTGGTATGGGAGACACCATGGCATTGCACCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: GICISVPTMCFPESS*LCWYGRHHGIAPFP
Trigger: GGGAAAAGGTGCAATGCCATGGTGTCTCCCATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGATGCAGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS CCA 90 bp GCCATCATTTCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGCAGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: AIISSSSPSAGGALL*SAPFFETQQTAVAP
Trigger: AGGAGCAACTGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGAAATGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp AGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGGTATGTGGCTGCACGAGCATATCCAGAGCCTaGGTGAAAGGCTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: RVGHSTLSYHSVQVCGCTSISRA*VKGSAI
Trigger: AATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCT...CGTGCAGCCACATACCTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GGTGAAAAGAGGTCCGAGGATGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGGGAATATTGTTCAAGTaGACAAAGGCTGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GEKRSEDGGYQGFIVLWGGILFK*TKAELR
Trigger: TCTCAGCTCAGCCTTTGTCAACTTGAACAATATTCC...CCCCCAGAGCACTATGAAGCCCTGGTATCCCCCATCCTCGGACCTCTTTTCACC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCCTGACAGCACTTGTTaGAGGAGAGGCCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWPDSTC*RRGQQS
Trigger: GCTCTGCTGGCCTCTCCTCAAACAAGTGCTGTCAGG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTCCCAGCCCTGGTCCTaGGAGGTACTATACTTGATA +
Preference number: 5 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHSQPWS*EVLYLI
Trigger: TATCAAGTATAGTACCTCCAAGGACCAGGGCTGGGA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp CTAAACACCAGGGATCTGCATCAGTGTGCCTACTATGTGTTTTCCTaGGAGCTCCTGCCTATGCTGGTATGGGAGACACCATGGCATTGC +
Preference number: 5 (lower is better)
Translates to: LNTRDLHQCAYYVFS*ELLPMLVWETPWHC
Trigger: GCAATGCCATGGTGTCTCCCATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGATGCAGATCCCTGGTGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS GCA 90 bp ATGAGGCGTTTGAATTGGTCCTTTCGGCGCTTGTCAGCCACTTTCTaGAGGGAGGGGTTTAAAAGCTTGCAGTCAAACTGGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: MRRLNWSFRRLSATF*REGFKSLQSNWSSE
Trigger: CTCACTGGACCAGTTTGACTGCAAGCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000455854.2
ENST00000488195.6
CDS CCA 90 bp GCCATCATTTCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGTGATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: AIISSSSPSAGGALL*SAPFFETQQTVIRS
Trigger: GGACCTAATCACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGAAATGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 90 bp AATGTTAAGCTCCATCCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGTGATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: NVKLHPSPSAGGALL*SAPFFETQQTVIRS
Trigger: GGACCTAATCACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGGATGGAGCTTAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455285.2
CDS CCA 90 bp CATGCCCGCCGCAAACATGAATCCTTTGCATTAGTCAGGCCTTCATaGAGTTGGCTGAGCGACCAGCTCTTCTTCCAGGAAAATCCTCTA +
Preference number: 5 (lower is better)
Translates to: HARRKHESFALVRPS*SWLSDQLFFQENPL
Trigger: TAGAGGATTTTCCTGGAAGAAGAGCTGGTCGCTCAGCCAACTCCATGAAGGCCTGACTAATGCAAAGGATTCATGTTTGCGGCGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450462.6
CDS-3UTR CAA 90 bp CCGCACCAGCTAAAAACTGTAGCTTCAGTCCACTTCGGCTCTCGGGGAAACCCTTGTCTGTGTTTCCCCTaGTTTGGAAAGAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: PHQLKTVASVHFGSRGNPCLCFP*FGKSVQ
Trigger: TTGGACACTCTTTCCAAACAAGGGGAAACACAGACA...AGGGTTTCCCCGAGAGCCGAAGTGGACTGAAGCTACAGTTTTTAGCTGGTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTGATGTCCCTTCTTCTTaGAGGGGGAAGTGTCTGAAA +
Preference number: 5 (lower is better)
Translates to: ASSQSDPACGPHQLKTVADVPSS*RGKCLK
Trigger: TTTCAGACACTTCCCCCTCAAAGAAGAAGGGACATC...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGTTCCGGTCTTCCAACTaGCCTTTTCTGCTGACTGCA +
Preference number: 5 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPEFRSSN*PFLLTA
Trigger: TGCAGTCAGCAGAAAAGGCAAGTTGGAAGACCGGAA...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTTGTGCTCGGGAGGAGTaGAAGAAAGCATTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: WSGPRETLAQVVEGCALACAREE*KKALKS
Trigger: GGACTTCAATGCTTTCTTCAACTCCTCCCGAGCACA...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGCATCACCTCTCCTTGTaGTGCTCGGGAGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRHHLSL*CSGGVE
Trigger: TTCAACTCCTCCCGAGCACAACAAGGAGAGGTGATG...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGACAAATCCCCCAGCTTaGGCCTCTTCTAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLTNPPA*ASSRSV
Trigger: CACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTGT...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGCCCGTGCATCTGTAAGCCTTTCAGCACACTGGTGAAAAGCCACGTAACTGCACTCCTCCAGCATCTCTaGAGACTCTGGGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: CPCICKPFSTLVKSHVTALLQHL*RLWVFI
Trigger: GATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAG...TGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGAATGAGGCGTTTGAATaGGTCCTTTCGGCGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPENEAFE*VLSALV
Trigger: GACAAGCGCCGAAAGGACCAATTCAAACGCCTCATT...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGTTGCTAGTCGCAGGGTaGGGCACAGCACCCTTAGTT +
Preference number: 5 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWLLVAG*GTAPLV
Trigger: AACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAA...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCATTGAGGGCTGTGCTCTaGCTGCGAGCCTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPLRAVL*LRALLV
Trigger: GACTAGCAAGGCTCGCAGCAAGAGCACAGCCCTCAA...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGAGAAGACCAGCGGCTTaGCTAGCTGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRRRPAA*LAAHHR
Trigger: TCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCT...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGTGGAGGGAAACACTCTaGAGATCGCCTTCACGATCC +
Preference number: 5 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRWRETL*RSPSRS
Trigger: GGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCA...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGGAGTGGTCCAAGAGAAACTCTGGCACAAGTAGTTGAGGGCTGTGCTCTTGCTAGGCAGCTATCAGGTTaGGAGGGAAACACTCTTGAG +
Preference number: 5 (lower is better)
Translates to: WSGPRETLAQVVEGCALARQLSG*EGNTLE
Trigger: CTCAAGAGTGTTTCCCTCCAAACCTGATAGCTGCCT...AGCAAGAGCACAGCCCTCAACTACTTGTGCCAGAGTTTCTCTTGGACCACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp ACGGAACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCTCATCACCTCTCCTaGTTGTGCTCGGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: TEQRLPSPVPTAEQEFTEPHHLS*LCSGGL
Trigger: CAAGCCTCCCGAGCACAACAAGGAGAGGTGATGAGG...TTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS TCA 90 bp AAAGAAGAGATGACAAGAAAGGCCGAGGAAGGATGCCCAAAAGCTTaGTTCAGGGTTCAAAGATGGTGGCCAGGCCACCCCCATCATTGT +
Preference number: 5 (lower is better)
Translates to: KEEMTRKAEEGCPKA*FRVQRWWPGHPHHC
Trigger: ACAATGATGGGGGTGGCCTGGCCACCATCTTTGAACCCTGAATCAAGCTTTTGGGCATCCTTCCTCGGCCTTTCTTGTCATCTCTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS CCA 90 bp GCCATCATTTCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGCTAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: AIISSSSPSAGGALL*SAPFFETQQTAKAR
Trigger: TCTTGCTTTAGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGAAATGATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488195.6
CDS-3UTR CAA 90 bp GCTTCTTCTCAATCTGACCCTGCCTGTGGCCCGCACCAGCTAAAAACTGTAGCTTGTGGCCACTCTCGCTaGATCATTTCCACTACAATT +
Preference number: 5 (lower is better)
Translates to: ASSQSDPACGPHQLKTVACGHSR*IISTTI
Trigger: AATTGTAGTGGAAATGATCAAGCGAGAGTGGCCACA...AGCTACAGTTTTTAGCTGGTGCGGGCCACAGGCAGGGTCAGATTGAGAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACAGAAGGAAAGCCCATCTaGACCAAGTTAGTCATGGAA +
Preference number: 5 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETEGKPI*TKLVME
Trigger: TTCCATGACTAACTTGGTCAAGATGGGCTTTCCTTC...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTAGGATGAGGGGATCCTaGGTATCAAAGTTCAGAACC +
Preference number: 5 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCRMRGS*VSKFRT
Trigger: GGTTCTGAACTTTGATACCAAGGATCCCCTCATCCT...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATGTCAGGAGTAGCTCATaGGAGAGGAGTTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHVRSSS*ERSCFT
Trigger: TGTGAAGCAACTCCTCTCCAATGAGCTACTCCTGAC...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGGGGGATACCAGGGCTTCATAGTGCTCTGGGGGACAGAAGAGCACCAGAGGCTATAAGCGCAAGCAAATaGTCAAGAAGTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: WGIPGLHSALGDRRAPEAISASK*SRSFRI
Trigger: GATTCTGAAACTTCTTGACAATTTGCTTGCGCTTAT...AGCCTCTGGTGCTCTTCTGTCCCCCAGAGCACTATGAAGCCCTGGTATCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACACTTTCCAAGACGGTTTaGAAGACAGGAGAGTCATTG +
Preference number: 5 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETLSKTV*KTGESL
Trigger: CAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAG...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATACACAGCAGGCTCCTTaGGTTGATAACTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHTQQAP*VDNLPF
Trigger: AAATGGCAAGTTATCAACCAAAGGAGCCTGCTGTGT...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCAAGGGCTCAGTGGGAGTaGGAGTGGTCCAAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPRAQWE*EWSKRN
Trigger: GTTTCTCTTGGACCACTCCAACTCCCACTGAGCCCT...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATTGGTCTGTATTATCCTaGGATGACAACGGTGTCATG +
Preference number: 5 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHWSVLS*DDNGVM
Trigger: CATGACACCGTTGTCATCCAAGGATAATACAGACCA...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp CCAGGCCTGGGTCACAGCTCTTCTGATCTGTACCCACATACGCAATaGAAGCATCAACATCTGACAGCACTCTGTGCATGTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: PGLGHSSSDLYPHTQ*KHQHLTALCACLEK
Trigger: TTTCTCAAGACATGCACAGAGTGCTGTCAGATGTTGATGCTTTCATTGCGTATGTGGGTACAGATCAGAAGAGCTGTGACCCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 90 bp ATCAGTGTGCCTACTATGTGTTTTCCTGAGAGCTCCTGCCTATGCTaGTATGGGAGACACCATGGCATTGCACCTTTTCCCTCGGTTTTT +
Preference number: 5 (lower is better)
Translates to: ISVPTMCFPESSCLC*YGRHHGIAPFPSVF
Trigger: AAAAACCGAGGGAAAAGGTGCAATGCCATGGTGTCTCCCATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS-3UTR CAA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGTCTGACGATGGCAACTaGTGTTTTCTCAGCCAACCT +
Preference number: 5 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLSDDGN*CFLSQP
Trigger: AGGTTGGCTGAGAAAACACAAGTTGCCATCGTCAGA...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CTCCACAGCCCCAACCAGACAGGAATAGGCAGCTATCAGGTTTGGAGGGAAACATGTGTTTCCCCTTGTTaGGAAAGAGTGTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: LHSPNQTGIGSYQVWRETCVSPC*ERVSNS
Trigger: AGAATTGGACACTCTTTCCAAACAAGGGGAAACACA...TGTTTCCCTCCAAACCTGATAGCTGCCTATTCCTGTCTGGTTGGGGCTGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGGCAGTGCAAGAAGGGCCTAGAGATCGGCTACAAAGGGAAAGAAGAGATGACAAGTTTGCTTGCGCCTTaGACTCCTGAGAAGTATCTG +
Preference number: 5 (lower is better)
Translates to: WQCKKGLEIGYKGKEEMTSLLAP*TPEKYL
Trigger: CAGATACTTCTCAGGAGTCAAAGGCGCAAGCAAACT...TGTCATCTCTTCTTTCCCTTTGTAGCCGATCTCTAGGCCCTTCTTGCACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TACTTTAGTATAATTACTTCTGGTCCTGCACAGGGCCTGTTCTCTCCAGCTCCACTCCTACTCGACAGTTaGCTTGCGCCTTTGACTCCT +
Preference number: 5 (lower is better)
Translates to: YFSIITSGPAQGLFSPAPLLLDS*LAPLTP
Trigger: AGGAGTCAAAGGCGCAAGCAAACTGTCGAGTAGGAG...TGGAGCTGGAGAGAACAGGCCCTGTGCAGGACCAGAAGTAATTATACTAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATATCTGGAAGCTAGTTTaGGGATCCAAACGACATGCC +
Preference number: 5 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHIWKLV*GSKRHA
Trigger: GGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGAT...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AGCCTTGCTAGTCGCAGGGTTGGGCACAGCACCCTTAGTTACCATTCTGTACAGCTCATTGGAGAGGAGTaGCTTCACATGGTTATAAAG +
Preference number: 5 (lower is better)
Translates to: SLASRRVGHSTLSYHSVQLIGEE*LHMVIK
Trigger: CTTTATAACCATGTGAAGCAACTCCTCTCCAATGAG...CTGTACAGAATGGTAACTAAGGGTGCTGTGCCCAACCCTGCGACTAGCAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CCCTCTTGTCAGTGGACTGGATGGACAACAGGTCTGTTTTTGTGCAGAGCACATAAAGGCTCTGCCATTTaGGCTAGCATTTCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: PSCQWTGWTTGLFLCRAHKGSAI*ASISGA
Trigger: TGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTT...ATGTGCTCTGCACAAAAACAGACCTGTTGTCCATCCAGTCCACTGACAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGGTTACGGAAGCACAGTATAGAAGTCTaGCTGCATGGAAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASKLSRSFRICSVQGLRKHSIEV*LHGRAC
Trigger: GCAGGCCCTTCCATGCAGCAAGACTTCTATACTGTG...CTTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp GCCAAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGTGCTTCATCAGACATTaGCCCAGGTCTGTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: AKFSSSLYHGSHQVTRFLCFIRH*PRSVSS
Trigger: AGAGCTTACAGACCTGGGCAAATGTCTGATGAAGCA...CAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp CCTTTTCTGCTGACTGCAATGAGAAGACACTCAGCGGCTCCCAACTaGAGTTCCTGTTCATTCAACAGCAAACACAGTATCTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PFLLTAMRRHSAAPN*SSCSFNSKHSISRS
Trigger: ACTCCTGGAGATACTGTGTTTGCTGTTGAATGAACAGGAACTTCAGTTGGGAGCCGCTGAGTGTCTTCTCATTGCAGTCAGCAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp CCCATGCCCATGGCTGATCTTCTAGAGATGCACTCAAGCTGTACATaGGGGAAATGGGAGCTTCTAGGCAGAAACACAAAATGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: PMPMADLLEMHSSCT*GKWELLGRNTKCCK
Trigger: TTTGCAGCATTTTGTGTTTCTGCCTAGAAGCTCCCATTTCCCTCATGTACAGCTTGAGTGCATCTCTAGAAGATCAGCCATGGGCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS GCA 90 bp CCAGCTCTTCTTCCAGGAAAATCCTCTATAGCCCCAGTTTCGACATaGCACTTACTGATTAGGTCCATGACTTCTCGGGTTAACATCCTC +
Preference number: 5 (lower is better)
Translates to: PALLPGKSSIAPVST*HLLIRSMTSRVNIL
Trigger: GAGGATGTTAACCCGAGAAGTCATGGACCTAATCAGTAAGTGGCATGTCGAAACTGGGGCTATAGAGGATTTTCCTGGAAGAAGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450462.6
CDS-3UTR CAA 90 bp GGTTTGGAGGGAAACACTCTTGAGATCGCCTTCACGATCCACAGAAACCCAGAGGAGTTGAAGAAAGCATaGAAGTCCTCATCGCTATCA +
Preference number: 5 (lower is better)
Translates to: GLEGNTLEIAFTIHRNPEELKKA*KSSSLS
Trigger: TGATAGCGATGAGGACTTCAATGCTTTCTTCAACTC...CTCTGGGTTTCTGTGGATCGTGAAGGCGATCTCAAGAGTGTTTCCCTCCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CAGGACAGGATGAGGGGATCCTTGGTATCAAAGTTCAGAACCATCTGCAATAGCAGGATGAGGGGATCCTaGGTATCAAAGTTCAGAACC +
Preference number: 5 (lower is better)
Translates to: QDRMRGSLVSKFRTICNSRMRGS*VSKFRT
Trigger: GGTTCTGAACTTTGATACCAAGGATCCCCTCATCCT...GCTATTGCAGATGGTTCTGAACTTTGATACCAAGGATCCCCTCATCCTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS-3UTR CAA 90 bp GGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATCACAGATGTGGAATATTGTTCAAGTaGACAAAGGCTGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GLSPRRRPAALLAAHHRCGILFK*TKAELR
Trigger: TCTCAGCTCAGCCTTTGTCAACTTGAACAATATTCC...ACATCTGTGATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GTCCTCTCTTTACAGGGCCTTTCAGTGACCTCTAGAATGGACTCACAGTACAGGTTCCAGGCCAGGGAATaGAAGGCTGTAATTAATAGC +
Preference number: 5 (lower is better)
Translates to: VLSLQGLSVTSRMDSQYRFQARE*KAVINS
Trigger: GCTATTAATTACAGCCTTCAATTCCCTGGCCTGGAA...CCTGTACTGTGAGTCCATTCTAGAGGTCACTGAAAGGCCCTGTAAAGAGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCTTGCCCAAAGCAAAGTaGAGAGAACTGACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: ALVLGGTILDTVPSLAVALPKAK*RELTKF
Trigger: GAACTTGGTCAGTTCTCTCAACTTTGCTTTGGGCAA...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCAGGTGACCAGATTCTaGCCCAAAGCAAAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWQVTRF*PKAKLR
Trigger: TCTCAACTTTGCTTTGGGCAAGAATCTGGTCACCTG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TTCTTCAGATACACCTTCTCCAATCGAGACATGCCGTTCCACCGAAACCTAAACCCAAGAGCTCCTTACTaGACAACGTGTTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: FFRYTFSNRDMPFHRNLNPRAPY*TTCSRI
Trigger: GATCCTGGAACACGTTGTCAAGTAAGGAGCTCTTGG...GTTTAGGTTTCGGTGGAACGGCATGTCTCGATTGGAGAAGGTGTATCTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR CAA 90 bp AACAGAGGCTTCCTTCTCCAGTTCCAACTGCAGAACAAGAATTCACAGAACCAGTTGTGCTCGGGAGGCTaGACCAAGTTAGTCATGGAA +
Preference number: 5 (lower is better)
Translates to: NRGFLLQFQLQNKNSQNQLCSGG*TKLVME
Trigger: TTCCATGACTAACTTGGTCAAGCCTCCCGAGCACAA...CTGGTTCTGTGAATTCTTGTTCTGCAGTTGGAACTGGAGAAGGAAGCCTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS CCA 90 bp TCAGCCACTTTCTGCAGGGAGGGGTTTAAAAGCTTGCAGTCAAACTaGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACA +
Preference number: 5 (lower is better)
Translates to: SATFCREGFKSLQSN*SSESFCISGICSIT
Trigger: TGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTGACTGCAAGCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000455854.2
ENST00000488195.6
CDS-3UTR CAA 90 bp CGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGCTCTGTGCAGGGGTTACGGAAAAAGGCTCTGCCATTTaGGCTAGCATTTCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: RKQIVKKFQNLLCAGVTEKGSAI*ASISGA
Trigger: TGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTT...TTCCGTAACCCCTGCACAGAGCAGATTCTGAAACTTCTTGACAATTTGCTTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp AAGTTTAGCAGTAGCCTGTACCATGGATCCCATCAGGTGACCAGATTCTTGCCCCCTTTGGTTGATAACTaGCCATTTCTGAGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: KFSSSLYHGSHQVTRFLPPLVDN*PFLRKP
Trigger: AGGCTTTCTCAGAAATGGCAAGTTATCAACCAAAGG...GGGCAAGAATCTGGTCACCTGATGGGATCCATGGTACAGGCTACTGCTAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AGCGCTGTACAAACATCCTCATGCTTCATCAGACATTTGCCCAGGTCTGTAAGCACACAGCAGGCTCCTTaGGTTGATAACTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: SAVQTSSCFIRHLPRSVSTQQAP*VDNLPF
Trigger: AAATGGCAAGTTATCAACCAAAGGAGCCTGCTGTGT...GCTTACAGACCTGGGCAAATGTCTGATGAAGCATGAGGATGTTTGTACAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACCTCCTCCAGCATCTCTaGAGACTCTGGGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINLLQHL*RLWVFI
Trigger: GATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAG...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AAGGCACCTGGACTTAGTCCTAGGAGAAGACCAGCGGCTTTGCTAGCTGCTCATAAGGCATGTATTCTTTaGGAAATGGCCTTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: KAPGLSPRRRPAALLAAHKACIL*EMAFEK
Trigger: TTTCTCAAAGGCCATTTCCAAAAGAATACATGCCTT...ATGAGCAGCTAGCAAAGCCGCTGGTCTTCTCCTAGGACTAAGTCCAGGTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 90 bp GTATTATTGCTAATAGCAAAGGATCACGGGACAGGATTTCATGCCTaGAGAGGGCTCCCCAAGTCATCTGAGTTGAAGAGCGTAGAAACT +
Preference number: 5 (lower is better)
Translates to: VLLLIAKDHGTGFHA*RGLPKSSELKSVET
Trigger: AGTTTCTACGCTCTTCAACTCAGATGACTTGGGGAGCCCTCTTCAGGCATGAAATCCTGTCCCGTGATCCTTTGCTATTAGCAATAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000496341.6
CDS GCA 90 bp CCTTGTTTGGAAAGAGTGTCCAATTCTATTAGCATGTCAGGCCAATaGTGTGGCCACTCTCGCTTGATCATTTCCACTACAATTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PCLERVSNSISMSGQ*CGHSRLIISTTIRD
Trigger: GTCTCGAATTGTAGTGGAAATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCTAATAGAATTGGACACTCTTTCCAAACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CCAAATCTCCAAGTAGAATGGGAACTATCTGGGACATCTAGACAGAATAGTTTACCTCATCACCTCTCCTaGTTGTGCTCGGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: PNLQVEWELSGTSRQNSLPHHLS*LCSGGV
Trigger: AACTCCTCCCGAGCACAACAAGGAGAGGTGATGAGG...TAAACTATTCTGTCTAGATGTCCCAGATAGTTCCCATTCTACTTGGAGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCCTCGTAGTTCTTAAATaGGTTGCTAATGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: ALVLGGTILDTVPSLAVALVVLK*VANENQ
Trigger: CTGGTTCTCATTAGCAACCAATTTAAGAACTACGAG...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCCCTGGTCCTTGGAGGTACTATACTTGATACTGTGCCAAGTTTAGCAGTAGCCGGTGCATATAATGTATaGTGGGTTCTTATAAGCGCA +
Preference number: 5 (lower is better)
Translates to: ALVLGGTILDTVPSLAVAGAYNV*WVLISA
Trigger: TGCGCTTATAAGAACCCACAATACATTATATGCACC...GGCTACTGCTAAACTTGGCACAGTATCAAGTATAGTACCTCCAAGGACCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp AACTGGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGCTCCATTACAGCTCTTTGCTTCATCAGACATTaGCCCAGGTCTGTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: NWSSESFCISGICSITALCFIRH*PRSVSS
Trigger: AGAGCTTACAGACCTGGGCAAATGTCTGATGAAGCA...AAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp CTCTGGCAGGACAGAGTATCTTTCCAGGCCAGGGAATTGAAGGCTGTAATTAATTTCCAGGCCAGGGAATaGAAGGCTGTAATTAATAGC +
Preference number: 5 (lower is better)
Translates to: LWQDRVSFQARELKAVINFQARE*KAVINS
Trigger: GCTATTAATTACAGCCTTCAATTCCCTGGCCTGGAA...ATTAATTACAGCCTTCAATTCCCTGGCCTGGAAAGATACTCTGTCCTGCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS-3UTR CAA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGTTTTGGAAATGGCCTTaGAGAAAAGTAACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWFWKWP*RKVTRD
Trigger: GTCCCTGGTTACTTTTCTCAAAGGCCATTTCCAAAA...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp CAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGATTAACAGGGGTTACGGAAGATaGGATTTCCACTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: QVCFCAEHMDTLVSVWINRGYGR*DFHWMY
Trigger: ATACATCCAGTGGAAATCCAATCTTCCGTAACCCCT...GTTAATCCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp GCTGTATACACAAAAGCTCATCCTGCTGACCAAGTTCTGACCTACTTCCTCATTAGGGGTTACGGAAGATaGGATTTCCACTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: AVYTKAHPADQVLTYFLIRGYGR*DFHWMY
Trigger: ATACATCCAGTGGAAATCCAATCTTCCGTAACCCCT...AATGAGGAAGTAGGTCAGAACTTGGTCAGCAGGATGAGCTTTTGTGTATACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp GGACAACAGGTCTGTTTTTGTGCAGAGCACATGGACACACTGGTTTCTGTATGGCTGTATTTCAGGGATTaGCTCCATTACAGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: GQQVCFCAEHMDTLVSVWLYFRD*LHYSSY
Trigger: ATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAG...CCATACAGAAACCAGTGTGTCCATGTGCTCTGCACAAAAACAGACCTGTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGTATTGTGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGACAAATCCCCCAGCTTaGGCCTCTTCTAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: CIVGSYKRKQIVKKFQNLTNPPA*ASSRSV
Trigger: CACTGACCTAGAAGAGGCCAAAGCTGGGGGATTTGT...CAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS TCA 90 bp ATGGGTTGTGAAAGCAAGAAAAGATTCCAGGTATTTTCCAAAGTTTaGTGGTGTTTCTACATCAGAATCTGCACCCAGCAATGCACACAG +
Preference number: 5 (lower is better)
Translates to: MGCESKKRFQVFSKV*WCFYIRICTQQCTQ
Trigger: CTGTGTGCATTGCTGGGTGCAGATTCTGATGTAGAAACACCATCAAACTTTGGAAAATACCTGGAATCTTTTCTTGCTTTCACAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000496341.6
CDS TCA 90 bp GGGAAATGGGAGCTTCTAGGCAGAAACACAAAATGCTGCAAATACTaGAGTTACTTTGTTGTTGGACAAATATTTGAGCACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: GKWELLGRNTKCCKY*SYFVVGQIFEHQTL
Trigger: CAGTGTCTGGTGCTCAAATATTTGTCCAACAACAAAGTAACTTCAGTATTTGCAGCATTTTGTGTTTCTGCCTAGAAGCTCCCATTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS-3UTR CAA 90 bp ACAGTTTTCATAGAGGGTAGAGAAGAAACGCTGCATTCTTTCCAAGACGGTTTTCCTTTGGTTGATAACTaGCCATTTCTGAGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: TVFIEGREETLHSFQDGFPLVDN*PFLRKP
Trigger: AGGCTTTCTCAGAAATGGCAAGTTATCAACCAAAGG...AAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS-3UTR CAA 90 bp CCGTTCCACCGAAACCTAAACAGCATCTCTATAGGTTATATAAGATATAAAGATTCTGACGATGGCAACTaGTGTTTTCTCAGCCAACCT +
Preference number: 5 (lower is better)
Translates to: PFHRNLNSISIGYIRYKDSDDGN*CFLSQP
Trigger: AGGTTGGCTGAGAAAACACAAGTTGCCATCGTCAGA...ATCTTTATATCTTATATAACCTATAGAGATGCTGTTTAGGTTTCGGTGGAACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS-3UTR CAA 90 bp CCAAATCTCCAAGTAGAATGGGAACTATCTGGGACATCTAGACAGAATAGTTTAATAAGCGCAAGCAAATaGTCAAGAAGTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: PNLQVEWELSGTSRQNSLISASK*SRSFRI
Trigger: GATTCTGAAACTTCTTGACAATTTGCTTGCGCTTAT...TAAACTATTCTGTCTAGATGTCCCAGATAGTTCCCATTCTACTTGGAGATTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS-3UTR CAA 90 bp TGTATTGTGGGTTCTTATAAGCGCAAGCAAATTGTCAAGAAGTTTCAGAATCTGGGTGCATATAATGTATaGTGGGTTCTTATAAGCGCA +
Preference number: 5 (lower is better)
Translates to: CIVGSYKRKQIVKKFQNLGAYNV*WVLISA
Trigger: TGCGCTTATAAGAACCCACAATACATTATATGCACC...CAGATTCTGAAACTTCTTGACAATTTGCTTGCGCTTATAAGAACCCACAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398835.7
CDS GCA 90 bp AGTAAATACACTTGTTCATATAGAGCTTATAGGAACTCCACATTCTaGATTTCTGAACAAATAGATGGTCAAGGCAGTGCAAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: SKYTCSYRAYRNSTF*ISEQIDGQGSARQD
Trigger: ATCTTGTCTTGCACTGCCTTGACCATCTATTTGTTCAGAAATGCAGAATGTGGAGTTCCTATAAGCTCTATATGAACAAGTGTATTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612911.1
CDS CCA 72 bp ACGAGGCACGACAGCTCCCTCGGCGAGACCACCCGTTaGTACCGGGCCGCGGCGGGCGGCGGGGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: TRHDSSLGETTR*YRAAAGGGGGK
Trigger: CTTCCCACCCCCGCCGCCCGCCGCGGCCCGGTACCAACGGGTGGTCTCGCCGAGGGAGCTGTCGTGCCTCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS GCA 72 bp CCATGCCTAGCGCCACGCGCCGAGAGCGCACACCACTaGAGTCCCGGGACCACGAGGCACGACAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PCLAPRAESAHH*SPGTTRHDSSL
Trigger: GAGGGAGCTGTCGTGCCTCGTGGTCCCGGGACTGCAGTGGTGTGCGCTCTCGGCGCGTGGCGCTAGGCATGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS TCA 72 bp CCAGCCGGTAGCGCTGGGTGGAGTTGGGGTCCATCATaGCCGTCACCGCTTTCACCAGCTGCTCGCACAGCG +
Preference number: 6 (lower is better)
Translates to: PAGSAGWSWGPS*PSPLSPAARTA
Trigger: CGCTGTGCGAGCAGCTGGTGAAAGCGGTGACGGTCATGATGGACCCCAACTCCACCCAGCGCTACCGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS GCA 72 bp GCTGCTCGCACAGCGCGTTTACTTGATCCATCGCCATaGCTAGCGCCACGCGCCGAGAGCGCACACCACTGC +
Preference number: 6 (lower is better)
Translates to: AARTARLLDPSP*LAPRAESAHHC
Trigger: GCAGTGGTGTGCGCTCTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTGCGAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS TCA 72 bp ACCGCTTTCACCAGCTGCTCGCACAGCGCGTTTACTTaGTCCATCGCCATGCCTAGCGCCACGCGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: TAFTSCSHSAFT*SIAMPSATRRE
Trigger: CTCTCGGCGCGTGGCGCTAGGCATGGCGATGGATCAAGTAAACGCGCTGTGCGAGCAGCTGGTGAAAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000398799.2
CDS CCA 72 bp GTAACTGCATCTGCGAGCAGTGTCCCTGACAGCACCTaGGGAGACAACTGTGCTTTAGGGCCACAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: VTASASSVPDST*GDNCALGPQGA
Trigger: GGCCCCCTGTGGCCCTAAAGCACAGTTGTCTCCCCAGGTGCTGTCAGGGACACTGCTCGCAGATGCAGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS TCA 72 bp GGGTATATACTACCACAACAGCCACCTCAGGCCCACTaGTCCCAACCTGTCTCTGGCCAGGTGAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GYILPQQPPQAH*SQPVSGQVRKE
Trigger: CTCCTTCCTCACCTGGCCAGAGACAGGTTGGGATCAGTGGGCCTGAGGTGGCTGTTGTGGTAGTATATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488195.6
CDS TCA 72 bp TGCTGGGGGAGCACTACTGTGGTCAGCACCCTTCTTTaGAACACAGCAAACCGCAGTTGCTCCTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: CWGSTTVVSTLL*NTANRSCSSSI
Trigger: GATGCTGGAGGAGCAACTGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS CCA 72 bp CTCCATCCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGTG +
Preference number: 6 (lower is better)
Translates to: LHPSPSAGGALL*SAPFFETQQTV
Trigger: CACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGGATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455285.2
CDS CAA 72 bp CTGCTGGGGGAGCACTACTGTGGTCAGCACCCTTCTTaGAAACACAGCAAACCGCAGTTGCTCCTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: LLGEHYCGQHPS*KHSKPQLLLQH
Trigger: ATGCTGGAGGAGCAACTGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS CAA 90 bp CTCTCCCAAGGGTTTCCCAATGCAACCAGCAATGAGGCGTTTGAATaGGTCCTTTCGGCGCTTGTCAGCCACTTTCTGCAGGGAGGGGTT +
Preference number: 6 (lower is better)
Translates to: LSQGFPNATSNEAFE*VLSALVSHFLQGGV
Trigger: AACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGGAAACCCTTGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS TCA 72 bp ATGACAAGAAAGGCCGAGGAAGGATGCCCAAAAGCTTaGTTCAGGGTTCAAAGATGGTGGCCAGGCCACCCC +
Preference number: 6 (lower is better)
Translates to: MTRKAEEGCPKA*FRVQRWWPGHP
Trigger: GGGGTGGCCTGGCCACCATCTTTGAACCCTGAATCAAGCTTTTGGGCATCCTTCCTCGGCCTTTCTTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS TCA 72 bp GCCCTCCCACCTCCACATAATGCCCATGCCCATGGCTaGTCTTCTAGAGATGCACTCAAGCTGTACATGAGG +
Preference number: 6 (lower is better)
Translates to: ALPPPHNAHAHG*SSRDALKLYMR
Trigger: CCTCATGTACAGCTTGAGTGCATCTCTAGAAGATCAGCCATGGGCATGGGCATTATGTGGAGGTGGGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS GCA 72 bp CATCAGAATCTGCACCCAGCAATGCACACAGCTGATTaGCCAGCGCACACAACACCTGACAGAGCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: HQNLHPAMHTAD*PAHTTPDRASS
Trigger: TGAAGAGGCTCTGTCAGGTGTTGTGTGCGCTGGGCAATCAGCTGTGTGCATTGCTGGGTGCAGATTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000496341.6
CDS GCA 72 bp GATGGAGGAACAAGCATGCCTCCTCACATTCCTCACTaGCCGGGTTCTGGGGGCCTTACTTTCTTCAACAGT +
Preference number: 6 (lower is better)
Translates to: DGGTSMPPHIPH*PGSGGLTFFNS
Trigger: ACTGTTGAAGAAAGTAAGGCCCCCAGAACCCGGGCAGTGAGGAATGTGAGGAGGCATGCTTGTTCCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 72 bp ACAGCACTCTGTGCATGTCTTGAGAAAGCCAGATGCTaGCCACTGGTGCCATCAGCTCCTCTAGGAACACCT +
Preference number: 6 (lower is better)
Translates to: TALCACLEKARC*PLVPSAPLGTP
Trigger: AGGTGTTCCTAGAGGAGCTGATGGCACCAGTGGCCAGCATCTGGCTTTCTCAAGACATGCACAGAGTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000513451.1
CDS CAA 90 bp AACTGCTCTCCCAAGGGTTTCCCAATGCAACCAGCAATGAGGCGTTaGAATTGGTCCTTTCGGCGCTTGTCAGCCACTTTCTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: NCSPKGFPMQPAMRR*NWSFRRLSATFCRE
Trigger: CTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGGAAACCCTTGGGAGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS TCA 72 bp CCACACGGATCCTCCAGGCCTGGGTCACAGCTCTTCTaGTCTGTACCCACATACGCAATGAAAGCATCAACA +
Preference number: 6 (lower is better)
Translates to: PHGSSRPGSQLF*SVPTYAMKAST
Trigger: TGTTGATGCTTTCATTGCGTATGTGGGTACAGATCAGAAGAGCTGTGACCCAGGCCTGGAGGATCCGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 72 bp TCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGTG +
Preference number: 6 (lower is better)
Translates to: SSSSPSAGGALL*SAPFFETQQTV
Trigger: CACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CCA 72 bp GGTTTCCCAATGCAACCAGCAATGAGGCGTTTGAATTaGTCCTTTCGGCGCTTGTCAGCCACTTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GFPMQPAMRRLN*SFRRLSATFCR
Trigger: CCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS CCA 72 bp TCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGCA +
Preference number: 6 (lower is better)
Translates to: SSSSPSAGGALL*SAPFFETQQTA
Trigger: TGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486936.2
CDS CCA 72 bp TCTTCATCGTCTCCATCTGCTGGGGGAGCACTACTGTaGTCAGCACCCTTCTTTGAAACACAGCAAACCGCT +
Preference number: 6 (lower is better)
Translates to: SSSSPSAGGALL*SAPFFETQQTA
Trigger: AGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACGATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488195.6
CDS CAA 72 bp CCAGCAATGAGGCGTTTGAATTGGTCCTTTCGGCGCTaGTCAGCCACTTTCTGCAGGGAGGGGTTTAAAAGC +
Preference number: 6 (lower is better)
Translates to: PAMRRLNWSFRR*SATFCREGFKS
Trigger: GCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000455854.2
ENST00000488195.6
CDS CAA 72 bp GGGTTTCCCAATGCAACCAGCAATGAGGCGTTTGAATaGGTCCTTTCGGCGCTTGTCAGCCACTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GFPNATSNEAFE*VLSALVSHFLQ
Trigger: CTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS CAA 72 bp TGTATGTGTAGGATGGAGACAAAGCTCAGGCCTGGCTaGGGGAGGCTAAACACCAGGGATCTGCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: CMCRMETKLRPG*GRLNTRDLHQC
Trigger: ACACTGATGCAGATCCCTGGTGTTTAGCCTCCCCAAGCCAGGCCTGAGCTTTGTCTCCATCCTACACATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS CAA 72 bp GGGATCCAAACGACATGCCAACCTCATCACCTCTCCTaGTTGTGCTCGGGAGGCTTGACCAAGTTAGTCATG +
Preference number: 6 (lower is better)
Translates to: GIQTTCQPHHLS*LCSGGLTKLVM
Trigger: CATGACTAACTTGGTCAAGCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS CAA 90 bp CGTCTCCATCTGCTGGGGGAGCACTACTGTGGTCAGCACCCTTCTTaGAAACACAGCAAACCGCTAAAGCAAGAAAGCAGGGTTACTAGG +
Preference number: 6 (lower is better)
Translates to: RLHLLGEHYCGQHPS*KHSKPLKQESRVTR
Trigger: CCTAGTAACCCTGCTTTCTTGCTTTAGCGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAGTGCTCCCCCAGCAGATGGAGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488195.6
CDS CAA 90 bp CCAATGCAACCAGCAATGAGGCGTTTGAATTGGTCCTTTCGGCGCTaGTCAGCCACTTTCTGCAGGGAGGGGTTTAAAAGCTTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: PMQPAMRRLNWSFRR*SATFCREGFKSLQS
Trigger: TGACTGCAAGCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS CAA 90 bp GAAAGAAGAGATGACAAGAAAGGCCGAGGAAGGATGCCCAAAAGCTaGATTCAGGGTTCAAAGATGGTGGCCAGGCCACCCCCATCATTG +
Preference number: 6 (lower is better)
Translates to: ERRDDKKGRGRMPKS*IQGSKMVARPPPSL
Trigger: CAATGATGGGGGTGGCCTGGCCACCATCTTTGAACCCTGAATCAAGCTTTTGGGCATCCTTCCTCGGCCTTTCTTGTCATCTCTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000455854.2
CDS CAA 90 bp GAGAAAACCTGTATGTGTAGGATGGAGACAAAGCTCAGGCCTGGCTaGGGGAGGCTAAACACCAGGGATCTGCATCAGTGTGCCTACTAT +
Preference number: 6 (lower is better)
Translates to: EKTCMCRMETKLRPG*GRLNTRDLHQCAYY
Trigger: ATAGTAGGCACACTGATGCAGATCCCTGGTGTTTAGCCTCCCCAAGCCAGGCCTGAGCTTTGTCTCCATCCTACACATACAGGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS GCA 72 bp AGCCATCTGGAAGCTAGTTTTGGGATCCAAACGACATaGCAACCTCATCACCTCTCCTTGTTGTGCTCGGGA +
Preference number: 6 (lower is better)
Translates to: SHLEASFGIQTT*QPHHLSLLCSG
Trigger: TCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000424378.2
ENST00000496341.6
CDS GCA 72 bp CTTGGGGAGGCTAAACACCAGGGATCTGCATCAGTGTaGCTACTATGTGTTTTCCTGAGAGCTCCTGCCTAT +
Preference number: 6 (lower is better)
Translates to: LGEAKHQGSASV*LLCVFLRAPAY
Trigger: ATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGATGCAGATCCCTGGTGTTTAGCCTCCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS CCA 72 bp CCTACTATGTGTTTTCCTGAGAGCTCCTGCCTATGCTaGTATGGGAGACACCATGGCATTGCACCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: PTMCFPESSCLC*YGRHHGIAPFP
Trigger: GGGAAAAGGTGCAATGCCATGGTGTCTCCCATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS TCA 72 bp CTAATAGCAAAGGATCACGGGACAGGATTTCATGCCTaGAGAGGGCTCCCCAAGTCATCTGAGTTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LIAKDHGTGFHA*RGLPKSSELKS
Trigger: GCTCTTCAACTCAGATGACTTGGGGAGCCCTCTTCAGGCATGAAATCCTGTCCCGTGATCCTTTGCTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000496341.6
CDS GCA 72 bp TTGAATTGGTCCTTTCGGCGCTTGTCAGCCACTTTCTaGAGGGAGGGGTTTAAAAGCTTGCAGTCAAACTGG +
Preference number: 6 (lower is better)
Translates to: LNWSFRRLSATF*REGFKSLQSNW
Trigger: CCAGTTTGACTGCAAGCTTTTAAACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000455854.2
ENST00000488195.6
CDS GCA 72 bp ATCAGTGTGCCTACTATGTGTTTTCCTGAGAGCTCCTaGCTATGCTGGTATGGGAGACACCATGGCATTGCA +
Preference number: 6 (lower is better)
Translates to: ISVPTMCFPESS*LCWYGRHHGIA
Trigger: TGCAATGCCATGGTGTCTCCCATACCAGCATAGGCAGGAGCTCTCAGGAAAACACATAGTAGGCACACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS CCA 72 bp CGCAAACATGAATCCTTTGCATTAGTCAGGCCTTCATaGAGTTGGCTGAGCGACCAGCTCTTCTTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RKHESFALVRPS*SWLSDQLFFQE
Trigger: TTCCTGGAAGAAGAGCTGGTCGCTCAGCCAACTCCATGAAGGCCTGACTAATGCAAAGGATTCATGTTTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450462.6
CDS CAA 72 bp GGGATCCAAACGACATGCCAACCTCATCACCTCTCCTaGTTGTGCTCGGGAGGAGTTGAAGAAAGCATTGAA +
Preference number: 6 (lower is better)
Translates to: GIQTTCQPHHLS*LCSGGVEESIE
Trigger: TTCAATGCTTTCTTCAACTCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000424378.2
CDS CAA 72 bp TACTTTAGCCACTCCCCAGCCATCTGGAAGCTAGTTTaGGGATCCAAACGACATGCCAACCTCATCACCTCT +
Preference number: 6 (lower is better)
Translates to: YFSHSPAIWKLV*GSKRHANLITS
Trigger: AGAGGTGATGAGGTTGGCATGTCGTTTGGATCCCAAAACTAGCTTCCAGATGGCTGGGGAGTGGCTAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000424378.2
ENST00000496341.6
CDS CAA 72 bp ATCCAAACGACATGCCAACCTCATCACCTCTCCTTGTaGTGCTCGGGAGGCTTGACCAAGTTAGTCATGGAA +
Preference number: 6 (lower is better)
Translates to: IQTTCQPHHLSL*CSGGLTKLVME
Trigger: TTCCATGACTAACTTGGTCAAGCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496341.6
CDS TCA 72 bp CCGTTCCACCGAAACTTGACAACGTGTTCCAGGATCTaGAGGCCAAAATGTCTGACGATGGCAACTTGTGTT +
Preference number: 6 (lower is better)
Translates to: PFHRNLTTCSRI*RPKCLTMATCV
Trigger: AACACAAGTTGCCATCGTCAGACATTTTGGCCTTCAGATCCTGGAACACGTTGTCAAGTTTCGGTGGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS GCA 72 bp CAGTGGGCCAGCAAGTTCGTTTCACCACACCCAGAATaGTGTATACACAAAAGCTCATTCGTGCACGGTTTA +
Preference number: 6 (lower is better)
Translates to: QWASKFVSPHPE*CIHKSSFVHGL
Trigger: TAAACCGTGCACGAATGAGCTTTTGTGTATACAGCATTCTGGGTGTGGTGAAACGAACTTGCTGGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000612911.1
CDS CCA 72 bp CATGAATCCTTTGCATTAGTCAGGCCTTCATGGAGTTaGCTGAGCGACCAGCTCTTCTTCCAGGAAAATCCT +
Preference number: 6 (lower is better)
Translates to: HESFALVRPSWS*LSDQLFFQENP
Trigger: AGGATTTTCCTGGAAGAAGAGCTGGTCGCTCAGCCAACTCCATGAAGGCCTGACTAATGCAAAGGATTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450462.6
CDS CAA 72 bp ATCCAAACGACATGCCAACCTCATCACCTCTCCTTGTaGTGCTCGGGAGGAGTTGAAGAAAGCATTGAAGTC +
Preference number: 6 (lower is better)
Translates to: IQTTCQPHHLSL*CSGGVEESIEV
Trigger: GACTTCAATGCTTTCTTCAACTCCTCCCGAGCACAACAAGGAGAGGTGATGAGGTTGGCATGTCGTTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000424378.2
CDS TCA 72 bp TTAGCATGTCAGGCCAATGCTGTGGCCACTCTCGCTTaGTCATTTCCACTACAATTCGAGACAGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: LACQANAVATLA*SFPLQFETEHL
Trigger: AAGATGCTCTGTCTCGAATTGTAGTGGAAATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 72 bp CTGACTGCAATGAGAAGACACTCAGCGGCTCCCAACTaGAGTTCCTGTTCATTCAACAGCAAACACAGTATC +
Preference number: 6 (lower is better)
Translates to: LTAMRRHSAAPN*SSCSFNSKHSI
Trigger: GATACTGTGTTTGCTGTTGAATGAACAGGAACTTCAGTTGGGAGCCGCTGAGTGTCTTCTCATTGCAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 72 bp CCAAGAGCTCCTTACTTGACAACGTGTTCCAGGATCTaGAGGCCAAAATGTCTGACGATGGCAACTTGTGTT +
Preference number: 6 (lower is better)
Translates to: PRAPYLTTCSRI*RPKCLTMATCV
Trigger: AACACAAGTTGCCATCGTCAGACATTTTGGCCTTCAGATCCTGGAACACGTTGTCAAGTAAGGAGCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398799.2
CDS GCA 72 bp CTTCCAGGAAAATCCTCTATAGCCCCAGTTTCGACATaGCACTTACTGATTAGGTCCATGACTTCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: LPGKSSIAPVST*HLLIRSMTSRV
Trigger: AACCCGAGAAGTCATGGACCTAATCAGTAAGTGGCATGTCGAAACTGGGGCTATAGAGGATTTTCCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450462.6
CDS CCA 72 bp TTCTGCAGGGAGGGGTTTAAAAGCTTGCAGTCAAACTaGTCCAGTGAGTCCTTCTGTATTTCAGGGATTTGC +
Preference number: 6 (lower is better)
Translates to: FCREGFKSLQSN*SSESFCISGIC
Trigger: GCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTGACTGCAAGCTTTTAAACCCCTCCCTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265351.12
ENST00000455854.2
ENST00000488195.6
CDS CAA 72 bp ATTAGCATGTCAGGCCAATGCTGTGGCCACTCTCGCTaGATCATTTCCACTACAATTCGAGACAGAGCATCT +
Preference number: 6 (lower is better)
Translates to: ISMSGQCCGHSR*IISTTIRDRAS
Trigger: AGATGCTCTGTCTCGAATTGTAGTGGAAATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS GCA 72 bp GAAAGAGTGTCCAATTCTATTAGCATGTCAGGCCAATaGTGTGGCCACTCTCGCTTGATCATTTCCACTACA +
Preference number: 6 (lower is better)
Translates to: ERVSNSISMSGQ*CGHSRLIISTT
Trigger: TGTAGTGGAAATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCTAATAGAATTGGACACTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS TCA 72 bp ATGGCTGATCTTCTAGAGATGCACTCAAGCTGTACATaGGGGAAATGGGAGCTTCTAGGCAGAAACACAAAA +
Preference number: 6 (lower is better)
Translates to: MADLLEMHSSCT*GKWELLGRNTK
Trigger: TTTTGTGTTTCTGCCTAGAAGCTCCCATTTCCCTCATGTACAGCTTGAGTGCATCTCTAGAAGATCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455854.2
CDS CAA 90 bp TCCAATTCTATTAGCATGTCAGGCCAATGCTGTGGCCACTCTCGCTaGATCATTTCCACTACAATTCGAGACAGAGCATCTTTAATATGG +
Preference number: 6 (lower is better)
Translates to: SNSISMSGQCCGHSR*IISTTIRDRASLIW
Trigger: CCATATTAAAGATGCTCTGTCTCGAATTGTAGTGGAAATGATCAAGCGAGAGTGGCCACAGCATTGGCCTGACATGCTAATAGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265351.12
CDS CAA 90 bp TTACCTAATATAGCAGATTTTTCCGCGTCAAGCATATCCAGAGCCTaGGTGAAAGGCTCTGCCATTTTGGCTAGCATTTCTGGTGCATAT +
Preference number: 6 (lower is better)
Translates to: LPNIADFSASSISRA*VKGSAILASISGAY
Trigger: ATATGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTGCTATATTAGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612911.1
CDS TCA 72 bp GAGTTGAAGAGCGTAGAAACTGACTTGGATGGGTTGTaGAAGCAAGAAAAGATTCCAGGTATTTTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: ELKSVETDLDGL*KQEKIPGIFQS
Trigger: ACTTTGGAAAATACCTGGAATCTTTTCTTGCTTTCACAACCCATCCAAGTCAGTTTCTACGCTCTTCAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265351.12
ENST00000496341.6
CDS CCA 72 bp TTAAGGACTGCCTTGCTTCTATCTAGTTATTTCTTTTaGATCTGTCAGTGTTGCTACAAACATGAACTTTTT +
Preference number: 6 (lower is better)
Translates to: LRTALLLSSYFF*ICQCCYKHELF
Trigger: AAAAAGTTCATGTTTGTAGCAACACTGACAGATCCAAAAGAAATAACTAGATAGAAGCAAGGCAGTCCTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450462.6