RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132953

Ensembl transcript IDs: ENST00000255305.10, ENST00000465018.1, ENST00000490513.1

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAGACATTCTGACTCTGAAGGTCTACAGTTGGGCCTAAGAATCTaGCTTTTCACCAGCTCCTCAAGTGATGCAGGCGATCTATGGAGA +
Preference number: 1 (lower is better)
Translates to: TRHSDSEGLQLGLRI*LFTSSSSDAGDLWR
Trigger: TCTCCATAGATCGCCTGCATCACTTGAGGAGCTGGTGAAAAGGCAGATTCTTAGGCCCAACTGTAGACCTTCAGAGTCAGAATGTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 90 bp GAGTTTCATGAGTGCACCTGTGCCAGAGTCCTCTACCTGTCACTGTaGTGTGAAAGTACTGCAATGAGTGGAGTTTCATATGCCTGCTGT +
Preference number: 1 (lower is better)
Translates to: EFHECTCARVLYLSL*CESTAMSGVSYACC
Trigger: ACAGCAGGCATATGAAACTCCACTCATTGCAGTACTTTCACAGCACAGTGACAGGTAGAGGACTCTGGCACAGGTGCACTCATGAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp AAAGTGAATAAGCATCCAATCAGGCAAACATGGACACAACCACCCTaGAAAGGTCTAGCCGTTGCAACTCAGTGGCATCCCCATCACCTA +
Preference number: 1 (lower is better)
Translates to: KVNKHPIRQTWTQPP*KGLAVATQWHPHHL
Trigger: TAGGTGATGGGGATGCCACTGAGTTGCAACGGCTAGACCTTTTCAGGGTGGTTGTGTCCATGTTTGCCTGATTGGATGCTTATTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp GTGGTAAAAGACACCACACCAGGAAGCCTGGGCTCAGAAAACACTTaGGGTCAGATCCCTAGTAGGTACATAGTGCAGATGCAGTATATA +
Preference number: 1 (lower is better)
Translates to: VVKDTTPGSLGSENT*GQIPSRYIVQMQYI
Trigger: TATATACTGCATCTGCACTATGTACCTACTAGGGATCTGACCTCAAGTGTTTTCTGAGCCCAGGCTTCCTGGTGTGGTGTCTTTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 90 bp TTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTaGCCTTTGGTAAAGAGACTGTACTTAGCACACACACAGATACAC +
Preference number: 1 (lower is better)
Translates to: FCHGAWTCPVNCVFQ*PLVKRLYLAHTQIH
Trigger: GTGTATCTGTGTGTGTGCTAAGTACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp GTGCCAGAGTCCTCTACCTGTCACTGTGCTGTGAAAGTACTGCAATaGGTGGAGTTTCATATGCCTGCTGTGTATAAATTAGCTTTCATT +
Preference number: 1 (lower is better)
Translates to: VPESSTCHCAVKVLQ*VEFHMPAVYKLAFI
Trigger: AATGAAAGCTAATTTATACACAGCAGGCATATGAAACTCCACTCATTGCAGTACTTTCACAGCACAGTGACAGGTAGAGGACTCTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CCA 90 bp GAATTATACGCCAGACTGAGACAGGATGCTGCTGGGGGTGCTGTATaGAATTTCCCAGCAAAAGATTCTTTCATTAGTTTCACCAAATAT +
Preference number: 1 (lower is better)
Translates to: ELYARLRQDAAGGAV*NFPAKDSFISFTKY
Trigger: ATATTTGGTGAAACTAATGAAAGAATCTTTTGCTGGGAAATTCCATACAGCACCCCCAGCAGCATCCTGTCTCAGTCTGGCGTATAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 90 bp GTCATACTTTACACCAGACAAAAACTCAATGCAGTGATGTTAACATaGTACTGTCTTCTAACAGAGATGGCCACCCTGAAAGACCCAAAT +
Preference number: 1 (lower is better)
Translates to: VILYTRQKLNAVMLT*YCLLTEMATLKDPN
Trigger: ATTTGGGTCTTTCAGGGTGGCCATCTCTGTTAGAAGACAGTAGCATGTTAACATCACTGCATTGAGTTTTTGTCTGGTGTAAAGTATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp AGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCACTGGGTTaGTGTGAGAGAGAGAGAGAAAAGAAAGAGAGAGACAGAAAGCAA +
Preference number: 1 (lower is better)
Translates to: SMISDLYYTKPAALG*CEREREKKERDRKQ
Trigger: TTGCTTTCTGTCTCTCTCTTTCTTTTCTCTCTCTCTCTCACATCAACCCAGTGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 90 bp AAAGCTAATCAAATTGAGAGAAATGTAAGTTATGGCCCAAGGCCCTaGATTCACATCTACCTAACATCACATGCACAGGTTGGATGTAAT +
Preference number: 1 (lower is better)
Translates to: KANQIERNVSYGPRP*IHIYLTSHAQVGCN
Trigger: ATTACATCCAACCTGTGCATGTGATGTTAGGTAGATGTGAATGCAGGGCCTTGGGCCATAACTTACATTTCTCTCAATTTGATTAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp ACAGAACAAGAACACAGTTACAGGTGCTACCACATTAACAGACTGTaGAAGTACAAAGTCTTTAGTGATTGTGCCTTGGGAAATAAATGG +
Preference number: 1 (lower is better)
Translates to: TEQEHSYRCYHINRL*KYKVFSDCALGNKW
Trigger: CCATTTATTTCCCAAGGCACAATCACTAAAGACTTTGTACTTTCACAGTCTGTTAATGTGGTAGCACCTGTAACTGTGTTCTTGTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CCA 90 bp ACTTTTCACTTCATATGTTTACAAGATTTAACACTGGGCAAAGGGTaGATCTATCTAGCACACAGTAATATGGTAATTCACCACTTTCCC +
Preference number: 1 (lower is better)
Translates to: TFHFICLQDLTLGKG*IYLAHSNMVIHHFP
Trigger: GGGAAAGTGGTGAATTACCATATTACTGTGTGCTAGATAGATCCACCCTTTGCCCAGTGTTAAATCTTGTAAACATATGAAGTGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 90 bp TGGGCTTTCTTAAAGGTGTATTTGAAGCCTAAGATTAGGCAGAAATaGACATTATCAAAACAAGAACAAAACTGCTCACTACTGTGGGAA +
Preference number: 1 (lower is better)
Translates to: WAFLKVYLKPKIRQK*TLSKQEQNCSLLWE
Trigger: TTCCCACAGTAGTGAGCAGTTTTGTTCTTGTTTTGATAATGTTCATTTCTGCCTAATCTTAGGCTTCAAATACACCTTTAAGAAAGCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGCAGAGTTTCATGAGTaGACCTGTGCCAGAGTCCTC +
Preference number: 2 (lower is better)
Translates to: PCSLPVQVALPGQSLEITAEFHE*TCARVL
Trigger: GAGGACTCTGGCACAGGTGCACTCATGAAACTCTGC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCCAACAAACCCCTGGTaGTGTTTCCCCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHPTNPW*CFPFLL
Trigger: CAGCAGGAAGGGGAAACATCACCAGGGGTTTGTTGG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGGAAGCAGAGTTTCATaGGTGCACCTGTGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHGSRVS*VHLCQS
Trigger: ACTCTGGCACAGGTGCACTCATGAAACTCTGCTTCC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTTGGGCCTAAGAATCTaGCTTTTCACCAGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLGLRI*LFTSSS
Trigger: TGAGGAGCTGGTGAAAAGGCAGATTCTTAGGCCCAA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCAAGTACTGCAATGAGTaGAGTTTCATATGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPKYCNE*SFICLL
Trigger: CAGCAGGCATATGAAACTCCACTCATTGCAGTACTT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp CATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTTaGGTAAAGAGACTGTACTTAGCACACACACAGATACACATAATT +
Preference number: 2 (lower is better)
Translates to: HGAWTCPVNCVFQCP*VKRLYLAHTQIHII
Trigger: AATTATGTGTATCTGTGTGTGTGCTAAGTACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGTCTCAAATGACAGATaGTTAGCCTGTGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: PCSLPVQVALPGQSLEITVSNDR*LACVYG
Trigger: GCCATACACACAGGCTAATCATCTGTCATTTGAGAC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCCTAATGCCCCAACGTaGAATAGTCTGTGTGAATCA +
Preference number: 2 (lower is better)
Translates to: PCSLPVQVALPGQSLEITPNAPT*NSLCES
Trigger: TGATTCACACAGACTATTGCACGTTGGGGCATTAGG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGACTGGCTCCCATGTCTaGATAAGAATTATTGCCCCT +
Preference number: 2 (lower is better)
Translates to: SWHTELGEPGSCIKILIKTGSHV*IRIIAP
Trigger: AGGGGCAATAATTCTTATCCAGACATGGGAGCCAGT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp AATAATGGTGCTGGAAAGGACACTGTCAAATACTGTCAGGTAGTTTaGCTACTGAGGCAGCCACTCATCCAGCACAAGGACTATAAAAGC +
Preference number: 2 (lower is better)
Translates to: NNGAGKDTVKYCQVV*LLRQPLIQHKDYKS
Trigger: GCTTTTATAGTCCTTGTGCTGGATGAGTGGCTGCCTCAGTAGCAAAACTACCTGACAGTATTTGACAGTGTCCTTTCCAGCACCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCTTAACAGCAGAAGCTaGTGCCAAGTTGACCTCTCC +
Preference number: 2 (lower is better)
Translates to: INLHKYTIERGNRFIAANLNSRS*CQVDLS
Trigger: GGAGAGGTCAACTTGGCATCAGCTTCTGCTGTTAAG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCACCAGCTCCTCAAGTaGTGCAGGCGATCTATGGAG +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMHQLLK*CRRSME
Trigger: CTCCATAGATCGCCTGCATCACTTGAGGAGCTGGTG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTGTAAGCTGGCACACTaGATTAGGGGAGCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMCKLAH*IRGAWQ
Trigger: CTGCCAGGCTCCCCTAATTCAGTGTGCCAGCTTACA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAAATTTTACACGTGCTaGGTGGTAGCAGTGCTAACA +
Preference number: 2 (lower is better)
Translates to: PCSLPVQVALPGQSLEITKFYTC*VVAVLT
Trigger: TGTTAGCACTGCTACCACTCAGCACGTGTAAAATTT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp AACTTGATTATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATaGTGTGTTTCAGTGCCCTTTGGTAAAGAGACTGTACTTAGCACA +
Preference number: 2 (lower is better)
Translates to: NLIIVLSWRVDLSSQ*CVSVPFGKETVLST
Trigger: TGTGCTAAGTACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTATAATCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACCTGTCACTGTGCTGTaGAAGTACTGCAATGAGTGG +
Preference number: 2 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLPVTVL*KYCNEW
Trigger: CCACTCATTGCAGTACTTTCACAGCACAGTGACAGG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTGGACACAACCACCCTaGAAAGGTCTAGCCGTTGCA +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMWTQPP*KGLAVA
Trigger: TGCAACGGCTAGACCTTTTCAGGGTGGTTGTGTCCA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAATTATACGCCAGACTaGGACAGGATGCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMNYTPD*DRMLLG
Trigger: CCCCAGCAGCATCCTGTCTCAGTCTGGCGTATAATT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGACTGAGACAGGATGCTaGTGGGGGTGCTGTATGGAA +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMTETGC*WGCCME
Trigger: TTCCATACAGCACCCCCAGCAGCATCCTGTCTCAGT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGTTGATTCAAAACTTTTaGGGTGACGAAAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SWHTELGEPGSCIKILIKLIQNF*GDEREK
Trigger: CTTCTCCCTTTCGTCACCCCAAAAGTTTTGAATCAA...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCAAAACCTGCAGCACTaGGTTGATGTGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: INLHKYTIERGNRFIAANQNLQH*VDVRER
Trigger: TCTCTCTCTCACATCAACCCAGTGCTGCAGGTTTTG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTTCCACATTGTAAGCTaGCACACTGAATTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHFHIVS*HTELGE
Trigger: CTCCCCTAATTCAGTGTGCCAGCTTACAATGTGGAA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATATTATAGTTTTGTCATaGCGCGTGGACCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHIIVLS*RVDLSS
Trigger: ACTGGACAGGTCCACGCGCCATGACAAAACTATAAT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGTTCTTGACACCCACTaGGCCAAGAGCATTAAAACA +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHVLDTH*AKSIKT
Trigger: TGTTTTAATGCTCTTGGCCCAGTGGGTGTCAAGAAC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACACCCTAAACCAACTCTaGAGCATCAAGACGTGGTTT +
Preference number: 2 (lower is better)
Translates to: INLHKYTIERGNRFIAANTLNQL*SIKTWF
Trigger: AAACCACGTCTTGATGCTTCAGAGTTGGTTTAGGGT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGTGAAAGTACTGCAATaGGTGGAGTTTCATATGCCT +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHVKVLQ*VEFHMP
Trigger: AGGCATATGAAACTCCACTCATTGCAGTACTTTCAC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGGAGACAGGATGCTGCTaGGGGTGCTGTATGGAATTT +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMETGCC*GCCMEF
Trigger: AAATTCCATACAGCACCCCCAGCAGCATCCTGTCTC...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAATGGCCAAATGAACTaGGGAATAGGACAAGACTCA +
Preference number: 2 (lower is better)
Translates to: INLHKYTIERGNRFIAANNGQMN*GIGQDS
Trigger: TGAGTCTTGTCCTATTCCTCAGTTCATTTGGCCATT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGATCTATGGAGATTTTaGGAAACACTGCCTAGCATA +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHDLWRF*ETLPSI
Trigger: TATGCTAGGCAGTGTTTCTCAAAATCTCCATAGATC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCTTAGTAAGGTCAATTaGCAACCACCTCTAACAACA +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHLSKVN*QPPLTT
Trigger: TGTTGTTAGAGGTGGTTGTCAATTGACCTTACTAAG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTCTACCTGTCACTGTaGTGTGAAAGTACTGCAATG +
Preference number: 2 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLYLSL*CESTAM
Trigger: CATTGCAGTACTTTCACAGCACAGTGACAGGTAGAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTATGGGCTATGTGGCTaGATAGAAACACACTCAAAA +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHYGLCG*IETHSK
Trigger: TTTTGAGTGTGTTTCTATCCAGCCACATAGCCCATA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAGTGTCAGGAACATGGTaGAAGCAGAGTTTCATGAGT +
Preference number: 2 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLVSGTW*KQSFMS
Trigger: ACTCATGAAACTCTGCTTCCACCATGTTCCTGACAC...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp ATTCCTTTCCCACTCCTCTTTAGTTTTAATAACTTGATTATAGTTTaGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: IPFPLLFSFNNLIIV*SWRVDLSSQLCVSV
Trigger: CACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTATAATCAAGTTATTAAAACTAAAGAGGAGTGGGAAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTCAGGCATCAGAGTATaGTTAGTGACTTGTATTACA +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHSGIRV*LVTCIT
Trigger: TGTAATACAAGTCACTAATCATACTCTGATGCCTGA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAAAGAAAACACAAAGTaGATAAGCATCCAATCAGGC +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHKENTK*ISIQSG
Trigger: GCCTGATTGGATGCTTATTCACTTTGTGTTTTCTTT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAAACCACAAACTCACTaGATAGAGCTTCTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHKPQTH*IELLSL
Trigger: CAAAGAAAGAAGCTCTATGCAGTGAGTTTGTGGTTT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGTTTCCCCTTCCTGCTaGATTATAAAACCCAATCAT +
Preference number: 2 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAVSPSC*IIKPNH
Trigger: ATGATTGGGTTTTATAATTCAGCAGGAAGGGGAAAC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATGCATATGTATTTCGTaGTGCCCATATCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLCICIS*CPYLFA
Trigger: TGCAAACAGATATGGGCACCACGAAATACATATGCA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp TGTAATGACACATATGCTATATGCAATCAGGTAGAAAAACCGTATTaGCAGAATGGTTTAATAGATAGGTGTCAGGAACATGGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: CNDTYAICNQVEKPY*QNGLIDRCQEHGGS
Trigger: GCTTCCACCATGTTCCTGACACCTATCTATTAAACCATTCTGCAAATACGGTTTTTCTACCTGATTGCATATAGCATATGTGTCATTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACATATATGACAGATTGTaGCTAACACTTAACAGCAGA +
Preference number: 2 (lower is better)
Translates to: INLHKYTIERGNRFIAANIYDRL*LTLNSR
Trigger: TCTGCTGTTAAGTGTTAGCCACAATCTGTCATATAT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp CTCACTACTGTGGGAATAAAAATGTTTAGCAGATCCTATTTGCTTTaGTTCATTCATCATCTCTGGGAAACATCAATGACTTACCTCAGT +
Preference number: 2 (lower is better)
Translates to: LTTVGIKMFSRSYLL*FIHHLWETSMTYLS
Trigger: ACTGAGGTAAGTCATTGATGTTTCCCAGAGATGATGAATGAACAAAAGCAAATAGGATCTGCTAAACATTTTTATTCCCACAGTAGTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp CTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTaGTTAACTGTTAATAACACAGAATTATACAAAGTTTTGCACAGC +
Preference number: 2 (lower is better)
Translates to: LTSHAQVGCNSDAPV*LTVNNTELYKVLHS
Trigger: GCTGTGCAAAACTTTGTATAATTCTGTGTTATTAACAGTTAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 90 bp AAACTGCTCACTACTGTGGGAATAAAAATGTTTAGCAGATCCTATTaGCTTTTGTTCATTCATCATCTCTGGGAAACATCAATGACTTAC +
Preference number: 2 (lower is better)
Translates to: KLLTTVGIKMFSRSY*LLFIHHLWETSMTY
Trigger: GTAAGTCATTGATGTTTCCCAGAGATGATGAATGAACAAAAGCAAATAGGATCTGCTAAACATTTTTATTCCCACAGTAGTGAGCAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGATTAAGGCAATGAAATaGCTACAGTTCCTAAGGTTA +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMIKAMK*LQFLRL
Trigger: TAACCTTAGGAACTGTAGCCATTTCATTGCCTTAAT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTGCTTAAAATTCAACTaGAACCATGGCATTTCACAT +
Preference number: 2 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMCLKFN*NHGISH
Trigger: ATGTGAAATGCCATGGTTCCAGTTGAATTTTAAGCA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp GGTGTCAGGAACATGGTGGAAGCAGAGTTTCATGAGTaGACCTGTGCCAGAGTCCTCTACCTGTCACTGTGC +
Preference number: 3 (lower is better)
Translates to: GVRNMVEAEFHE*TCARVLYLSLC
Trigger: GCACAGTGACAGGTAGAGGACTCTGGCACAGGTGCACTCATGAAACTCTGCTTCCACCATGTTCCTGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp AAGCATCCAATCAGGCAAACATGGACACAACCACCCTaGAAAGGTCTAGCCGTTGCAACTCAGTGGCATCCC +
Preference number: 3 (lower is better)
Translates to: KHPIRQTWTQPP*KGLAVATQWHP
Trigger: GGGATGCCACTGAGTTGCAACGGCTAGACCTTTTCAGGGTGGTTGTGTCCATGTTTGCCTGATTGGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp GGGACACTCAGTAGGAGGTTGAATTATACGCCAGACTaGGACAGGATGCTGCTGGGGGTGCTGTATGGAATT +
Preference number: 3 (lower is better)
Translates to: GTLSRRLNYTPD*DRMLLGVLYGI
Trigger: AATTCCATACAGCACCCCCAGCAGCATCCTGTCTCAGTCTGGCGTATAATTCAACCTCCTACTGAGTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGAAGCTGATGCCAAGTaGACCTCTCCTGTTTCACTG +
Preference number: 3 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPEADAK*TSPVSL
Trigger: CAGTGAAACAGGAGAGGTCAACTTGGCATCAGCTTC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp CACCTGTGCCAGAGTCCTCTACCTGTCACTGTGCTGTaGAAGTACTGCAATGAGTGGAGTTTCATATGCCTG +
Preference number: 3 (lower is better)
Translates to: HLCQSPLPVTVL*KYCNEWSFICL
Trigger: CAGGCATATGAAACTCCACTCATTGCAGTACTTTCACAGCACAGTGACAGGTAGAGGACTCTGGCACAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp GGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTaGCCTTTGGTAAAGAGACTGTACTTAGCACACACA +
Preference number: 3 (lower is better)
Translates to: GAWTCPVNCVFQ*PLVKRLYLAHT
Trigger: TGTGTGTGCTAAGTACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp GAGTGCACCTGTGCCAGAGTCCTCTACCTGTCACTGTaGTGTGAAAGTACTGCAATGAGTGGAGTTTCATAT +
Preference number: 3 (lower is better)
Translates to: ECTCARVLYLSL*CESTAMSGVSY
Trigger: ATATGAAACTCCACTCATTGCAGTACTTTCACAGCACAGTGACAGGTAGAGGACTCTGGCACAGGTGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCATTAAGCCAGTGTTCTaGACACCCACTGGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITIKPVF*TPTGPR
Trigger: TCTTGGCCCAGTGGGTGTCAAGAACACTGGCTTAAT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTCTGAAGGTCTACAGTaGGGCCTAAGAATCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITSEGLQ*GLRICL
Trigger: AAGGCAGATTCTTAGGCCCAACTGTAGACCTTCAGA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp GGGCCTAAGAATCTGCCTTTTCACCAGCTCCTCAAGTaGTGCAGGCGATCTATGGAGATTTTGAGAAACACT +
Preference number: 3 (lower is better)
Translates to: GPKNLPFHQLLK*CRRSMEILRNT
Trigger: AGTGTTTCTCAAAATCTCCATAGATCGCCTGCATCACTTGAGGAGCTGGTGAAAAGGCAGATTCTTAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp ACTTTTGGGGTGACGAAAGGGAGAAGCTTATTAACATaGAGACTCCTGGGCCCAACAACCAGACATTCTGAC +
Preference number: 3 (lower is better)
Translates to: TFGVTKGRSLLT*RLLGPTTRHSD
Trigger: GTCAGAATGTCTGGTTGTTGGGCCCAGGAGTCTTCATGTTAATAAGCTTCTCCCTTTCGTCACCCCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAACTTGATTATAGTTTaGTCATGGCGCGTGGACCTG +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITNLIIV*SWRVDL
Trigger: CAGGTCCACGCGCCATGACAAAACTATAATCAAGTT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGGATCTGGGCAAATTTaGCAAATATGTTGCCATCTG +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITGSGQI*QICCHL
Trigger: CAGATGGCAACATATTTGCAAAATTTGCCCAGATCC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTGTATGGCCCCACACTaGGTAATGAAAGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITCMAPH*VMKETK
Trigger: TTTTGTTTCTTTCATTACCAAGTGTGGGGCCATACA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCATTTATTTGGGACCTTaGAAATCATCTGTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: PCSLPVQVALPGQSLEITIYLGP*KSSVGL
Trigger: GAGACCCACAGATGATTTCAAAGGTCCCAAATAAAT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp AGTGACTTGTATTACACAAAACCTGCAGCACTGGGTTaGTGTGAGAGAGAGAGAGAAAAGAAAGAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: SDLYYTKPAALG*CEREREKKERD
Trigger: GTCTCTCTCTTTCTTTTCTCTCTCTCTCTCACATCAACCCAGTGCTGCAGGTTTTGTGTAATACAAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp GTCTGGATAAGAATTATTGCCCCTAATGCCCCAACGTaGAATAGTCTGTGTGAATCAGTGATTCACATCCTT +
Preference number: 3 (lower is better)
Translates to: VWIRIIAPNAPT*NSLCESVIHIL
Trigger: AAGGATGTGAATCACTGATTCACACAGACTATTGCACGTTGGGGCATTAGGGGCAATAATTCTTATCCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGCAATTCAGTGCACTTaGCAGAAAGGATCTAAATTA +
Preference number: 3 (lower is better)
Translates to: SWHTELGEPGSCIKILIKAIQCT*QKGSKL
Trigger: TAATTTAGATCCTTTCTGCAAAGTGCACTGAATTGC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGTGTTTCAGTGCCCTTaGGTAAAGAGACTGTACTTA +
Preference number: 3 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHVFQCP*VKRLYL
Trigger: TAAGTACAGTCTCTTTACCAAAGGGCACTGAAACAC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp TATGACAGATTGTGGCTAACACTTAACAGCAGAAGCTaGTGCCAAGTTGACCTCTCCTGTTTCACTGTATTA +
Preference number: 3 (lower is better)
Translates to: YDRLWLTLNSRS*CQVDLSCFTVL
Trigger: TAATACAGTGAAACAGGAGAGGTCAACTTGGCATCAGCTTCTGCTGTTAAGTGTTAGCCACAATCTGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp GAACACAGTTACAGGTGCTACCACATTAACAGACTGTaGAAGTACAAAGTCTTTAGTGATTGTGCCTTGGGA +
Preference number: 3 (lower is better)
Translates to: EHSYRCYHINRL*KYKVFSDCALG
Trigger: TCCCAAGGCACAATCACTAAAGACTTTGTACTTTCACAGTCTGTTAATGTGGTAGCACCTGTAACTGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGGTGCCCATATCTGTTaGCACATATATGGAATTTCA +
Preference number: 3 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHGAHIC*HIYGIS
Trigger: TGAAATTCCATATATGTGCAAACAGATATGGGCACC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCATCACATGCACAGGTaGGATGTAATTCAGATGCTC +
Preference number: 3 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMHHMHR*DVIQML
Trigger: GAGCATCTGAATTACATCCAACCTGTGCATGTGATG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp AGCTCCTCAAGTGATGCAGGCGATCTATGGAGATTTTaGGAAACACTGCCTAGCATATATCCATTTCATATT +
Preference number: 3 (lower is better)
Translates to: SSSSDAGDLWRF*ETLPSIYPFHI
Trigger: AATATGAAATGGATATATGCTAGGCAGTGTTTCTCAAAATCTCCATAGATCGCCTGCATCACTTGAGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp AACAGGTTCATAGCAGCTAACACCCTAAACCAACTCTaGAGCATCAAGACGTGGTTTCTTACTAAAACAAAT +
Preference number: 3 (lower is better)
Translates to: NRFIAANTLNQL*SIKTWFLTKTN
Trigger: ATTTGTTTTAGTAAGAAACCACGTCTTGATGCTTCAGAGTTGGTTTAGGGTGTTAGCTGCTATGAACCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACATATATATGACAGATaGTGGCTAACACTTAACAGC +
Preference number: 3 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLHIYDR*WLTLNS
Trigger: GCTGTTAAGTGTTAGCCACAATCTGTCATATATATG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp ATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTaGACTTTGCAGAAAGGATCTAAATTAAGCATAAAG +
Preference number: 3 (lower is better)
Translates to: IGQDSSQLSAIQ*TLQKGSKLSIK
Trigger: CTTTATGCTTAATTTAGATCCTTTCTGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR GCA 72 bp GTGATGCAGGCGATCTATGGAGATTTTGAGAAACACTaGCTAGCATATATCCATTTCATATTTAATGACAAA +
Preference number: 3 (lower is better)
Translates to: VMQAIYGDFEKH*LAYIHFIFNDK
Trigger: TTTGTCATTAAATATGAAATGGATATATGCTAGGCAGTGTTTCTCAAAATCTCCATAGATCGCCTGCATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR TCA 72 bp ACACAAACAAACCTTAAGAAGTACCGAGGTTCCTTCTaGCTTAAAAGGTTAATGTTTTATTCAGGAACCAAT +
Preference number: 3 (lower is better)
Translates to: TQTNLKKYRGSF*LKRLMFYSGTN
Trigger: ATTGGTTCCTGAATAAAACATTAACCTTTTAAGTCAGAAGGAACCTCGGTACTTCTTAAGGTTTGTTTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCTGAGCGATCACTTCTaGGGGCCCCAGCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLSDHF*GPQRRR
Trigger: GCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTGTAAGCTGGCACACTaGATTAGGGGAGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPCKLAH*IRGAWQ
Trigger: CTGCCAGGCTCCCCTAATTCAGTGTGCCAGCTTACA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGGATGCTGCTGGGGGTaGTGTATGGAATTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPGCCWG*CMEFPS
Trigger: GCTGGGAAATTCCATACAGCACCCCCAGCAGCATCC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGCGCCGCCGCCATCATaGTCTCTCTTCAATGACGCG +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITAPPPS*SLFNDA
Trigger: CGCGTCATTGAAGAGAGACCATGATGGCGGCGGCGC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGCCGCGTTCTCCAGCTaGGCGATCACTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANAAFSS*AITSGG
Trigger: GCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTGGACACAACCACCCTaGAAAGGTCTAGCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPWTQPP*KGLAVA
Trigger: TGCAACGGCTAGACCTTTTCAGGGTGGTTGTGTCCA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCCTTAACAGCAGAAGCTaGTGCCAAGTTGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPLNSRS*CQVDLS
Trigger: GGAGAGGTCAACTTGGCATCAGCTTCTGCTGTTAAG...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGCACCAGCTCCTCAAGTaGTGCAGGCGATCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKHQLLK*CRRSME
Trigger: CTCCATAGATCGCCTGCATCACTTGAGGAGCTGGTG...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGGGCCTGGGAATAGGTaGAGATCAAACCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKGPGNR*RSNHSG
Trigger: CCCACTGTGGTTTGATCTTCACCTATTCCCAGGCCC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGAGACAGGATGCTGCTaGGGGTGCTGTATGGAATTT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPETGCC*GCCMEF
Trigger: AAATTCCATACAGCACCCCCAGCAGCATCCTGTCTC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp GCTGGAAAGGACACTGTCAAATACTGTCAGGTAGTTTaGCTACTGAGGCAGCCACTCATCCAGCACAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGKDTVKYCQVV*LLRQPLIQHKD
Trigger: GTCCTTGTGCTGGATGAGTGGCTGCCTCAGTAGCAAAACTACCTGACAGTATTTGACAGTGTCCTTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGATGGTCTCTCTTCAATaGCGCGCCATGCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKMVSLQ*RAMRCI
Trigger: AATGCAGCGCATGGCGCGTCATTGAAGAGAGACCAT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGGTTTTCCCGCCTGCTaGACTCCTGCAGAACTTCAA +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKGFPAC*TPAELQ
Trigger: TTGAAGTTCTGCAGGAGTTCAGCAGGCGGGAAAACC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAGCGGAGTCTCTCCCTaGGTATCATCAGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITSGVSP*VSSAKR
Trigger: CCTCTTAGCTGATGATACTCAGGGAGAGACTCCGCT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCACAACATCCGCTGCTaGCACAGATCTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITHNIRC*HRSVCC
Trigger: GCAGCAAACAGATCTGTGTCAGCAGCGGATGTTGTG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTTCAATGACGCGCCATaGGCTGCATTCTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHFNDAP*AAFWER
Trigger: CCGCTCCCAGAATGCAGCGCATGGCGCGTCATTGAA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCCGCCTGCTGAACTCCTaGAGAACTTCAACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPRLLNS*RTSTVN
Trigger: GTTAACTGTTGAAGTTCTGCAGGAGTTCAGCAGGCG...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGTTTGCTGCTTGACCTaGCTCATGTCCTCTAAACAC +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPVCCLT*LMSSKH
Trigger: GTGTTTAGAGGACATGAGCCAGGTCAAGCAGCAAAC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp CCAACAACCAGACATTCTGACTCTGAAGGTCTACAGTaGGGCCTAAGAATCTGCCTTTTCACCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTTRHSDSEGLQ*GLRICLFTSSS
Trigger: TGAGGAGCTGGTGAAAAGGCAGATTCTTAGGCCCAACTGTAGACCTTCAGAGTCAGAATGTCTGGTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGGCGTTGTTCATTATTaGCCATGGAAGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITGVVHY*PWKVVP
Trigger: TGGCACCACCTTCCATGGTCAATAATGAACAACGCC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAAGAAGGCCATCTTCTaGTTCCGATCCAGCGTAGGA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITKKAIF*FRSSVG
Trigger: TCCTACGCTGGATCGGAAGCAGAAGATGGCCTTCTT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCAGACTGAGACAGGATaGTGCTGGGGGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHQTETG*CWGCCM
Trigger: CATACAGCACCCCCAGCAGCATCCTGTCTCAGTCTG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCATTATAGTTTTGTCATaGCGCGTGGACCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPIIVLS*RVDLSS
Trigger: ACTGGACAGGTCCACGCGCCATGACAAAACTATAAT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGTTCTTGACACCCACTaGGCCAAGAGCATTAAAACA +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPVLDTH*AKSIKT
Trigger: TGTTTTAATGCTCTTGGCCCAGTGGGTGTCAAGAAC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACACCTCTCCAATTGCTaGGAGGGCCTGGGAATAGGT +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAHLSNC*EGLGIG
Trigger: ACCTATTCCCAGGCCCTCCCAGCAATTGGAGAGGTG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCCAACAAACCCCTGGTaGTGTTTCCCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANPTNPW*CFPFLL
Trigger: CAGCAGGAAGGGGAAACATCACCAGGGGTTTGTTGG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCCTGCAGCACTGGGTTaGTGTGAGAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHPAALG*CERERE
Trigger: TTCTCTCTCTCTCTCACATCAACCCAGTGCTGCAGG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAGGAAGCAGAGTTTCATaGGTGCACCTGTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAGSRVS*VHLCQS
Trigger: ACTCTGGCACAGGTGCACTCATGAAACTCTGCTTCC...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAAATTATACGCCAGACTaGGACAGGATGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFANYTPD*DRMLLG
Trigger: CCCCAGCAGCATCCTGTCTCAGTCTGGCGTATAATT...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCACTCAGTAGGAGGTTaGATTATACGCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITHSVGG*IIRQTE
Trigger: CTCAGTCTGGCGTATAATTCAACCTCCTACTGAGTG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTCTGGGAAACATCAATaGCTTACCTCAGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPSGKHQ*LTSVHS
Trigger: AGAGTGAACTGAGGTAAGTCATTGATGTTTCCCAGA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGAACACAGTTACAGGTaGTACCACATTAACAGACTG +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPEHSYR*YHINRL
Trigger: CAGTCTGTTAATGTGGTAGCACCTGTAACTGTGTTC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAACTGAGACAGGATGCTaGTGGGGGTGCTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFATETGC*WGCCME
Trigger: TTCCATACAGCACCCCCAGCAGCATCCTGTCTCAGT...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTGTTGTACCCTGGGATaGAAGAAGCCTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITCCTLG*KKPFLL
Trigger: CAGGAGAAAAGGCTTCTTCCATCCCAGGGTACAACA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATGCCTCCAGGCAAAGCTaGCAAACCTCCGAACTCATT +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHASRQS*QTSELI
Trigger: AATGAGTTCGGAGGTTTGCCAGCTTTGCCTGGAGGC...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCACACTGGGCAAAGGGTaGATCTATCTAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITTLGKG*IYLAHS
Trigger: ACTGTGTGCTAGATAGATCCACCCTTTGCCCAGTGT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCTCACTACTCCAGACTaGGAGGTTACTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLTTPD*EVTDDF
Trigger: AAAGTCATCAGTAACCTCTCAGTCTGGAGTAGTGAG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAGATCTGTTTGCTGCTTaGCCTGGCTCATGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFADLFAA*PGSCPL
Trigger: TAGAGGACATGAGCCAGGTCAAGCAGCAAACAGATC...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCAGAGATGGCCACCCTaGAAGACCCAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHQRWPP*KTQIMV
Trigger: CACCATTATTTGGGTCTTTCAGGGTGGCCATCTCTG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCCACTCTCGGACAACTaGTTCCATTATGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANPLSDN*FHYGCG
Trigger: GCCACAGCCATAATGGAAGCAGTTGTCCGAGAGTGG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGACTTGATTGGCGAGTaGAAGGTAACGCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKDLIGE*KVTLKY
Trigger: GTATTTCAGCGTTACCTTGCACTCGCCAATCAAGTC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGAAAGTGACAAGGAGCTaGACAGTGTCATTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKKVTRS*TVSFAR
Trigger: CCTTGCAAATGACACTGTGCAGCTCCTTGTCACTTT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCACCAGCTTAAGAAAGTaGCGTGTTGCTAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPTSLRK*RVARKS
Trigger: ACTTTTTCTAGCAACACGGCACTTTCTTAAGCTGGT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGTCATCTCTGTGTTGTaGTTTTGCAAAACCAGCATA +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPVISVL*FCKTSI
Trigger: TATGCTGGTTTTGCAAAAGCACAACACAGAGATGAC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAGGAGGAGTGCTGCTTaGAGTGAGCTTGTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANRRSAA*SELVEG
Trigger: GCCTTCAACAAGCTCACTGCAAGCAGCACTCCTCCT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAGACACCTCTCCAATTaGTGGGAGGGCCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANRHLSN*WEGLGI
Trigger: TATTCCCAGGCCCTCCCAGCAATTGGAGAGGTGTCT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCCGCCAGGACTCTGTTaGCTTCAACAGCACATTTTG +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHPPGLC*LQQHIL
Trigger: CAAAATGTGCTGTTGAAGCCAACAGAGTCCTGGCGG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGCAAGAAATTAAGAGGTaGGCTTCGGCTTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKQEIKR*ASACKL
Trigger: CAGTTTGCAAGCCGAAGCCCACCTCTTAATTTCTTG...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAGCTACGTTGTCAATCTaGGTAGCCTCAGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAATLSI*VASAMP
Trigger: TGGCATTGCTGAGGCTACCCAGATTGACAACGTAGC...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTTCGCCAGCCGCAGTaGTCATCTCTGTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLRQPQ*SSLCCA
Trigger: AGCACAACACAGAGATGACCACTGCGGCTGGCGAAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGTGTCAGGAACATGGTaGAAGCAGAGTTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKVSGTW*KQSFMS
Trigger: ACTCATGAAACTCTGCTTCCACCATGTTCCTGACAC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATaGTGTGTTTCAGTGCCCTTTGGTAAAGAGACTGTA +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQ*CVSVPFGKETV
Trigger: TACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGGGAAGATGGGTCCATaGAGAGAAGCTAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAGKMGP*REANWA
Trigger: TGCCCAGTTAGCTTCTCTTCATGGACCCATCTTCCC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCAAATGTTTGTCATCTTaGACCAAAGTTAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPKCLSS*TKVNQD
Trigger: GTCCTGGTTAACTTTGGTTCAAGATGACAAACATTT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTACCGAGGTTCCTTCTaGCTTAAAAGGTTAATGTTT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPYRGSF*LKRLMF
Trigger: AAACATTAACCTTTTAAGTCAGAAGGAACCTCGGTA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAACTGGGCAAGGCACTaGAGAGAATCTTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHNWARH*RESCAI
Trigger: TATGGCACAAGATTCTCTGCAGTGCCTTGCCCAGTT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTTTTGTTGTCAACAGTaGTTGAACCCGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITFCCQQ*LNPVKQ
Trigger: TTGCTTCACCGGGTTCAAGCACTGTTGACAACAAAA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCATCATTTGCAAGGTCCTaGTCACTACTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFASFARS*SLLQTE
Trigger: CTCAGTCTGGAGTAGTGAGCAGGACCTTGCAAATGA...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAGCAGAGTTTCATGAGTaGACCTGTGCCAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLAEFHE*TCARVL
Trigger: GAGGACTCTGGCACAGGTGCACTCATGAAACTCTGC...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGATGAGAAGCAGGTCTTaGTATTGCTCTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKMRSRS*YCSSSA
Trigger: AGCAGAAGAAGAGCAATACCAAGACCTGCTTCTCAT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCAAAACCTGCAGCACTaGGTTGATGTGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHQNLQH*VDVRER
Trigger: TCTCTCTCTCACATCAACCCAGTGCTGCAGGTTTTG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACCACACCAGGAAGCCTaGGCTCAGAAAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLPHQEA*AQKTLE
Trigger: CTCAAGTGTTTTCTGAGCCCAGGCTTCCTGGTGTGG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp TGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTTaGGTAAAGAGACTGTACTTAGCACACACACAGATA +
Preference number: 4 (lower is better)
Translates to: WTCPVNCVFQCP*VKRLYLAHTQI
Trigger: TATCTGTGTGTGTGCTAAGTACAGTCTCTTTACCAAAGGGCACTGAAACACACAATTGACTGGACAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGTTTCCCCTTCCTGCTaGATTATAAAACCCAATCAT +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKVSPSC*IIKPNH
Trigger: ATGATTGGGTTTTATAATTCAGCAGGAAGGGGAAAC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCACCTGTCACTGTGCTGTaGAAGTACTGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAPVTVL*KYCNEW
Trigger: CCACTCATTGCAGTACTTTCACAGCACAGTGACAGG...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCATTCTCCCCACCCCAGTaGGCTAATATTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAFSPPQ*ANIQHS
Trigger: AGAATGTTGAATATTAGCTCACTGGGGTGGGGAGAA...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCTAGCTAAATACCCATaGACAAATCACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLAKYP*TNHTWS
Trigger: TGACCATGTGTGATTTGTTCATGGGTATTTAGCTAG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACATACTGGATATTCTGTaGGTACCACGGGTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANILDIL*VPRVLP
Trigger: TGGGAGAACCCGTGGTACTCACAGAATATCCAGTAT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCATCTGTGGGTCTCAAATaGCAGATGATTAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFASVGLK*QMISLC
Trigger: ACACAGGCTAATCATCTGTCATTTGAGACCCACAGA...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTTTATTTGGGACCTTTaGAATCATCTGTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITFIWDL*NHLWVS
Trigger: TGAGACCCACAGATGATTTCAAAGGTCCCAAATAAA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGAATATGTGCTCTGCATaGTGGCGTTGTTCATTATTG +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKNMCSA*WRCSLL
Trigger: CAATAATGAACAACGCCAGCATGCAGAGCACATATT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAGAACCCTCTGTATCTaGTCCGAACGCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANRTLCI*SERCTE
Trigger: TTCAGTACAGCGTTCGGAGCAGATACAGAGGGTTCT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCTGCACAGTGTCATTTaGAAGGTCCTGCTCACTACT +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANLHSVI*KVLLTT
Trigger: AGTAGTGAGCAGGACCTTGCAAATGACACTGTGCAG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAACCTCTGTCCAATACTaGTGTTTGGTTTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFATSVQY*CLVSVS
Trigger: GGACACAGAAACCAAACAGCAGTATTGGACAGAGGT...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACACAGATCTGTTTGCTaGTTGACCTGGCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLHRSVC*LTWLMS
Trigger: GGACATGAGCCAGGTCAAGCAGCAAACAGATCTGTG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACCTAATGCCCCAACGTaGAATAGTCTGTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAPNAPT*NSLCES
Trigger: TGATTCACACAGACTATTGCACGTTGGGGCATTAGG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAAAAAGGTCTAGCCGTTaGAACTCAGTGGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAKRSSR*NSVASP
Trigger: TGGGGATGCCACTGAGTTGCAACGGCTAGACCTTTT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTGTTCTGTTGTACCCTaGGATGGAAGAAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHCSVVP*DGRSLF
Trigger: GAAAAGGCTTCTTCCATCCCAGGGTACAACAGAACA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGAATCGCTGCTGAAGTaGCTGAAGAACCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAESLLK*LKNLCP
Trigger: TGGACAGAGGTTCTTCAGCCACTTCAGCAGCGATTC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGAGATTGACAGTCTCTaGGGTATTCTTGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKEIDSL*GILVNF
Trigger: GAAGTTTACAAGAATACCCCAGAGACTGTCAATCTC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTGCTTAAAATTCAACTaGAACCATGGCATTTCACAT +
Preference number: 4 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPCLKFN*NHGISH
Trigger: ATGTGAAATGCCATGGTTCCAGTTGAATTTTAAGCA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAAGATCAAACCACAGTaGGAGAGGAGGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHKIKPQ*ERRVKM
Trigger: CATCTTTACCCTCCTCTCCCACTGTGGTTTGATCTT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCACTCCGAACGCTGTACTaGATGGCAGACTTATCTGAT +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAALRTLY*MADLSD
Trigger: ATCAGATAAGTCTGCCATTCAGTACAGCGTTCGGAG...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCATTCTTTCCACCAAAGTaGCAAGGAGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAFFPPK*QGAAQC
Trigger: ACACTGTGCAGCTCCTTGTCACTTTGGTGGAAAGAA...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACCTCTGCACAGGACTTaGCAAGAAATTAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLPLHRT*QEIKRW
Trigger: CCACCTCTTAATTTCTTGTCAAGTCCTGTGCAGAGG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTCAGGCATCAGAGTATaGTTAGTGACTTGTATTACA +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITSGIRV*LVTCIT
Trigger: TGTAATACAAGTCACTAATCATACTCTGATGCCTGA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGAAAGAAAACACAAAGTaGATAAGCATCCAATCAGGC +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKKENTK*ISIQSG
Trigger: GCCTGATTGGATGCTTATTCACTTTGTGTTTTCTTT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGTCTCAAATGACAGATaGTTAGCCTGTGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANVSNDR*LACVYG
Trigger: GCCATACACACAGGCTAATCATCTGTCATTTGAGAC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGTTCAACAGCACATTTTaGGAGGATTCAAACATAGCT +
Preference number: 4 (lower is better)
Translates to: SWHTELGEPGSCIKILIKFNSTF*EDSNIA
Trigger: AGCTATGTTTGAATCCTCGCAAAATGTGCTGTTGAA...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCATTGGGCCTAAGAATCTaGCTTTTCACCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAALGLRI*LFTSSS
Trigger: TGAGGAGCTGGTGAAAAGGCAGATTCTTAGGCCCAA...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCAACTGCTTCCATTATaGCTGTGGCAGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANQLLPL*LWQLER
Trigger: TCTTTCAAGCTGCCACAGCCATAATGGAAGCAGTTG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATATGTCTGCCCAAATTTaGAGGAAGAAAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHMSAQI*RKKVPA
Trigger: AGCTGGAACTTTCTTCCTCCAAATTTGGGCAGACAT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCATTTTGTCATGGCGCGTaGACCTGTCCAGTCAATTGT +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAFCHGA*TCPVNC
Trigger: ACAATTGACTGGACAGGTCCACGCGCCATGACAAAA...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATCCCGAACATACTTTTaGAGGTTGGGCCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLSRTYF*RLGLCK
Trigger: CTTACAAAGGCCCAACCTTCAAAAGTATGTTCGGGA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCTTCAACAGTTAACATaGAGATCTGACGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHLQQLT*RSDEGL
Trigger: AAGACCTTCGTCAGATCTTCATGTTAACTGTTGAAG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCATCTCGATCATCCTCTTaGAGTTCACTTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFASRSSS*SSLISS
Trigger: GGAAGAAATAAGTGAACTTCAAGAGGATGATCGAGA...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACTCGAGATTCAACTTCTaGAACTCTGAGAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANSRFNF*NSENGR
Trigger: TCTGCCATTCTCAGAGTTTCAGAAGTTGAATCTCGA...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAACCCTAAACCAACTCTaGAGCATCAAGACGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAATLNQL*SIKTWF
Trigger: AAACCACGTCTTGATGCTTCAGAGTTGGTTTAGGGT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGTGAAAGTACTGCAATaGGTGGAGTTTCATATGCCT +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANVKVLQ*VEFHMP
Trigger: AGGCATATGAAACTCCACTCATTGCAGTACTTTCAC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACTTAGTAAGGTCAATTaGCAACCACCTCTAACAACA +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFALSKVN*QPPLTT
Trigger: TGTTGTTAGAGGTGGTTGTCAATTGACCTTACTAAG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAATGATAAGAATATGTaGTCTGCATGCTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHNDKNM*SACWRC
Trigger: ACAACGCCAGCATGCAGAGCACATATTCTTATCATT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCTAGTTTCCAAAATATaGTTGCAAACTGCAAATGGT +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLVSKI*LQTANG
Trigger: ACCATTTGCAGTTTGCAAGCATATTTTGGAAACTAG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAAAGCACTTCTTCCAATaGAGCACTTCGCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAKHFFQ*STSPKR
Trigger: TCTTTTGGGCGAAGTGCTGCATTGGAAGAAGTGCTT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACAGTCAAATTTCTTGTaGCATCTGGAGCAGCTAGGT +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLQSNFL*HLEQLG
Trigger: ACCTAGCTGCTCCAGATGGCACAAGAAATTTGACTG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAAAATTAAACAGGATTaGTACGTTGTCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: PCSLPVQVALPGQSLEITKIKQD*YVVNLG
Trigger: ACCCAGATTGACAACGTAGCAATCCTGTTTAATTTT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAGCAGGTCTTGGTATTaGTCTTCTTCTGCTGTAACA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANSRSWY*SSSAVT
Trigger: TGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCTTTCAGCAATTCAGTaGACTTTGCAGAAAGGATCT +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHLSAIQ*TLQKGS
Trigger: AGATCCTTTCTGCAAAGTGCACTGAATTGCTGAAAG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAATTGACCATGGAAGGTaGTGCCATCAGAACTTTAGC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLIDHGR*CHQNFS
Trigger: GCTAAAGTTCTGATGGCACCACCTTCCATGGTCAAT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAATGTGCTCTGCATGCTaGCGTTGTTCATTATTGACC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLMCSAC*RCSLLT
Trigger: GGTCAATAATGAACAACGCCAGCATGCAGAGCACAT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACATACTTTTGAAGGTTaGGCCTTTGTAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAHTFEG*AFVRHR
Trigger: CCTATGTCTTACAAAGGCCCAACCTTCAAAAGTATG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAGCTCAAGACTTGATTaGCGAGTGCAAGGTAACGCT +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMSSRLD*RVQGNA
Trigger: AGCGTTACCTTGCACTCGCCAATCAAGTCTTGAGCT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGGAGAGGCCACACCATTaGCAGTCAAATTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMERPHH*QSNFLC
Trigger: GCACAAGAAATTTGACTGCCAATGGTGTGGCCTCTC...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCATCAGAATATTCAGCCTaGTGCAAACACACCAACGTG +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAASEYSA*CKHTNV
Trigger: CACGTTGGTGTGTTTGCACCAGGCTGAATATTCTGA...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATTCCACATTGTAAGCTaGCACACTGAATTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLFHIVS*HTELGE
Trigger: CTCCCCTAATTCAGTGTGCCAGCTTACAATGTGGAA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCGAAGGTCTTCTTCCTaGAAAACTCTTTTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANRRSSS*KTLLQL
Trigger: TAACTGCAAAAGAGTTTTTCAGGAAGAAGACCTTCG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAATACTGAAGACATCTaGGCATTGAGGTTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMNTEDI*ALRFSR
Trigger: GCGGGAAAACCTCAATGCTCAGATGTCTTCAGTATT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTCAGTAATCCCTCAATaGAGTGTGCTAGATAATCAA +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHSVIPQ*SVLDNQ
Trigger: TTGATTATCTAGCACACTTCATTGAGGGATTACTGA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAACGTGTACTTCTGGATaGCTGATATTAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFATCTSG*LILISF
Trigger: GAAGGAAATTAATATCAGTCATCCAGAAGTACACGT...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACTACTAGTATGTATCTaGCAGTTCCTAATAGCTAAG +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFALLVCI*QFLIAK
Trigger: CTTAGCTATTAGGAACTGTCAGATACATACTAGTAG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAATTCACCACTTTCCCTaGAAGGCCAAAAAGAATGAC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLIHHFP*KAKKND
Trigger: GTCATTCTTTTTGGCCTTTCAGGGAAAGTGGTGAAT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATTCGCAGAGACTCGATaGTACCTTTTTCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLFAETR*YLFPRE
Trigger: TTCTCTTGGAAAAAGGTAGCATCGAGTCTCTGCGAA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATCCTGAAAAACTCTTTTaGAGTTACCATGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHPEKLF*SYHGIP
Trigger: TGGAATTCCATGGTAACTGCAAAAGAGTTTTTCAGG...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCTTCGGCTTGCAAACTaGTTAGCTAAATTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMLRLAN*LAKFHQ
Trigger: CTGGTGGAATTTAGCTAAGCAGTTTGCAAGCCGAAG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACTTCATCAATGTCCTCTaGACAGGACTTGACAAGAAA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANFINVL*TGLDKK
Trigger: TTTCTTGTCAAGTCCTGTGCAGAGGACATTGATGAA...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCTCTACCTGTCACTGTaGTGTGAAAGTACTGCAATG +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMLYLSL*CESTAM
Trigger: CATTGCAGTACTTTCACAGCACAGTGACAGGTAGAG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCTTCCATTATGGCTGTaGCAGCTTGAAAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMLPLWL*QLERGH
Trigger: ATGTCCTCTTTCAAGCTGCCACAGCCATAATGGAAG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTAGCATTCCTACACTaGCCAGTTGATCAGAAAACT +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLAFLH*PVDQKT
Trigger: AGTTTTCTGATCAACTGGCCAGTGTAGGAATGCTAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACTTGATTCAAAACTTTTaGGGTGACGAAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANLIQNF*GDEREK
Trigger: CTTCTCCCTTTCGTCACCCCAAAAGTTTTGAATCAA...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACTATGGGCTATGTGGCTaGATAGAAACACACTCAAAA +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANYGLCG*IETHSK
Trigger: TTTTGAGTGTGTTTCTATCCAGCCACATAGCCCATA...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGACTGGCTCCCATGTCTaGATAAGAATTATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMTGSHV*IRIIAP
Trigger: AGGGGCAATAATTCTTATCCAGACATGGGAGCCAGT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAATAACTGGGTCTTGCTaGCTTGATAGTAATGTTTCG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLITGSC*LDSNVS
Trigger: CGAAACATTACTATCAAGTCAGCAAGACCCAGTTAT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAATGGCCAAATGAACTaGGGAATAGGACAAGACTCA +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMNGQMN*GIGQDS
Trigger: TGAGTCTTGTCCTATTCCTCAGTTCATTTGGCCATT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGATCTATGGAGATTTTaGGAAACACTGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAADLWRF*ETLPSI
Trigger: TATGCTAGGCAGTGTTTCTCAAAATCTCCATAGATC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAGTATTGCTCTTCTTCTaGTGTAACATCTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAVLLFF*CNIYSL
Trigger: CAAAGAATAGATGTTACAGCAGAAGAAGAGCAATAC...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACATATGTATTTCGTGGTaGCCATATCTGTTTGCACAT +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANICISW*PYLFAH
Trigger: ATGTGCAAACAGATATGGGCACCACGAAATACATAT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAAACCACAAACTCACTaGATAGAGCTTCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANKPQTH*IELLSL
Trigger: CAAAGAAAGAAGCTCTATGCAGTGAGTTTGTGGTTT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTTTTGCAGTTACCATaGAATTCCATGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLLQLP*NSMLNP
Trigger: TGGATTGAGCATGGAATTCCATGGTAACTGCAAAAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAAGAAGCCTTTTCTCCTaGAGATCCCAAAATTTGAAG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLRSLFS*RSQNLK
Trigger: CTTCAAATTTTGGGATCTCCAGGAGAAAAGGCTTCT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCATCCAATACTGCTGTTTaGTTTCTGTGTCCATATGTG +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAASNTAV*FLCPYV
Trigger: CACATATGGACACAGAAACCAAACAGCAGTATTGGA...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTGATTACAAAGGGTTaGAAACTTCAAGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLITKG*KLQEIL
Trigger: CAGGATCTCTTGAAGTTTCCAACCCTTTGTAATCAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAAGTACTGCAATGAGTaGAGTTTCATATGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMKYCNE*SFICLL
Trigger: CAGCAGGCATATGAAACTCCACTCATTGCAGTACTT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR TCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAATCTTGTGCCATATCTaGATCTTCTCTGATTTTTCG +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAILCHI*IFSDFS
Trigger: CGAAAAATCAGAGAAGATTCAGATATGGCACAAGAT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGACCAAACAATATCTTTaGCCATCTGGGGACTTAGTA +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMTKQYL*PSGDLV
Trigger: TACTAAGTCCCCAGATGGGCAAAGATATTGTTTGGT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATTCTTAGAATACACTTaGAACAAAGTAAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLFLEYT*NKVRQA
Trigger: AGCCTGCCTTACTTTGTTGCAAGTGTATTCTAAGAA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAATTGTGTGTTTCAGTaGCCTTTGGTAAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMNCVFQ*PLVKRL
Trigger: CAGTCTCTTTACCAAAGGGCACTGAAACACACAATT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGGAACGCTGTACTGAATaGCAGACTTATCTGATCATA +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMERCTE*QTYLII
Trigger: TATGATCAGATAAGTCTGCCATTCAGTACAGCGTTC...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTGCATATGTATTTCGTaGTGCCCATATCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMCICIS*CPYLFA
Trigger: TGCAAACAGATATGGGCACCACGAAATACATATGCA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACACCGAATTGTATTTTTaGAGAGCACCATTAAAGATG +
Preference number: 4 (lower is better)
Translates to: INLHKYTIERGNRFIAANTELYF*RAPLKM
Trigger: CATCTTTAATGGTGCTCTCCAAAAATACAATTCGGT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAAAAGTTCACTTGGAATaGCAGTTAAAACATTTCGTG +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLKVHLE*QLKHFV
Trigger: CACGAAATGTTTTAACTGCCATTCCAAGTGAACTTT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAATATATGACAGATTGTaGCTAACACTTAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAIYDRL*LTLNSR
Trigger: TCTGCTGTTAAGTGTTAGCCACAATCTGTCATATAT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAATTAAGGCAATGAAATaGCTACAGTTCCTAAGGTTA +
Preference number: 4 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAIKAMK*LQFLRL
Trigger: TAACCTTAGGAACTGTAGCCATTTCATTGCCTTAAT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CCA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATTCATTCATCATCTCTaGGAAACATCAATGACTTAC +
Preference number: 4 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLFIHHL*ETSMTY
Trigger: GTAAGTCATTGATGTTTCCCAGAGATGATGAATGAA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR GCA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCAGACAAAAACTCAATaGAGTGATGTTAACATGCTA +
Preference number: 4 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMQTKTQ*SDVNML
Trigger: TAGCATGTTAACATCACTGCATTGAGTTTTTGTCTG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp CAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTaGCAGAAAGGATCTAAATTAAGCATAAAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QDSSQLSAIQCT*QKGSKLSIKFC
Trigger: ACAGAACTTTATGCTTAATTTAGATCCTTTCTGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
3UTR CAA 72 bp ACATATGCTATATGCAATCAGGTAGAAAAACCGTATTaGCAGAATGGTTTAATAGATAGGTGTCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: TYAICNQVEKPY*QNGLIDRCQEH
Trigger: ATGTTCCTGACACCTATCTATTAAACCATTCTGCAAATACGGTTTTTCTACCTGATTGCATATAGCATATGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp CCGCTGTCGACACCGGCGTCGCGGCCTCGGCGGGTCTGGCCGGGCTaGCGGGTTCCGGGTGGCTGGGAGGGGACTAGTGTGAGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: PLSTPASRPRRVWPG*RVPGGWEGTSVSPA
Trigger: GGCCGGGCTCACACTAGTCCCCTCCCAGCCACCCGGAACCCGGCAGCCCGGCCAGACCCGCCGAGGCCGCGACGCCGGTGTCGACAGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490513.1
CDS CCA 90 bp CCGTCGCAGCCGCTGTCGACACCGGCGTCGCGGCCTCGGCGGGTCTaGCCGGGCTGCCGGGTTCCGGGTGGCTGGGAGGGGACTAGTGTG +
Preference number: 5 (lower is better)
Translates to: PSQPLSTPASRPRRV*PGCRVPGGWEGTSV
Trigger: CACACTAGTCCCCTCCCAGCCACCCGGAACCCGGCAGCCCGGCCAGACCCGCCGAGGCCGCGACGCCGGTGTCGACAGCGGCTGCGACGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490513.1
CDS CCA 90 bp CCGCCATCATGGTCTCTCTTCAATGACGCGCCATGCGCTGCATTCTaGGAGCGGGCGCCGCGGCCGGCCAATCGCCGCCGCGACCCCGGA +
Preference number: 5 (lower is better)
Translates to: PPSWSLFNDAPCAAF*ERAPRPANRRRDPG
Trigger: TCCGGGGTCGCGGCGGCGATTGGCCGGCCGCGGCGCCCGCTCCCAGAATGCAGCGCATGGCGCGTCATTGAAGAGAGACCATGATGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490513.1
CDS CCA 90 bp CCAGCTGAGCGATCACTTCTGGGGGCCCCAGCGCCGCCGCCATCATaGTCTCTCTTCAATGACGCGCCATGCGCTGCATTCTGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: PAERSLLGAPAPPPS*SLFNDAPCAAFWER
Trigger: CCGCTCCCAGAATGCAGCGCATGGCGCGTCATTGAAGAGAGACCATGATGGCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS TCA 90 bp ACCATGGAAGGTGGTGCCATCAGAACTTTAGCCGCGTTCTCCAGCTaGGCGATCACTTCTGGGGGCCCCAGCGCCGCCGCCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: TMEGGAIRTLAAFSS*AITSGGPSAAAIMV
Trigger: GACCATGATGGCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCTAAAGTTCTGATGGCACCACCTTCCATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS CCA 90 bp TGCCATCAGAACTTTAGCCGCGTTCTCCAGCTGAGCGATCACTTCTaGGGGCCCCAGCGCCGCCGCCATCATGGTCTCTCTTCAATGACG +
Preference number: 5 (lower is better)
Translates to: CHQNFSRVLQLSDHF*GPQRRRHHGLSSMT
Trigger: CGTCATTGAAGAGAGACCATGATGGCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCTAAAGTTCTGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCTATGGCTGTGGCAGCTaGAAAGAGGACATAGTCCAC +
Preference number: 5 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPYGCGS*KEDIVH
Trigger: GTGGACTATGTCCTCTTTCAAGCTGCCACAGCCATA...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGAGAACAGGCCAGAGTTaGCACAGTGGGATTGCCACT +
Preference number: 5 (lower is better)
Translates to: SWHTELGEPGSCIKILIKRTGQS*HSGIAT
Trigger: AGTGGCAATCCCACTGTGCAAACTCTGGCCTGTTCT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp ACTAAGTTTGCCCTTTCTCTTCTTTCCACCAAAGTGACAAGGAGCTaGACAGTGTCATTTGCAAGGTCCTGCTCACTACTCCAGACTGAG +
Preference number: 5 (lower is better)
Translates to: TKFALSLLSTKVTRS*TVSFARSCSLLQTE
Trigger: CTCAGTCTGGAGTAGTGAGCAGGACCTTGCAAATGACACTGTGCAGCTCCTTGTCACTTTGGTGGAAAGAAGAGAAAGGGCAAACTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp CCTGGTGCAAACACACCAACGTGTAGAAAGCTTCGCCAGCCGCAGTaGTCATCTCTGTGTTGTGCTTTTGCAAAACCAGCATATCAAAAA +
Preference number: 5 (lower is better)
Translates to: PGANTPTCRKLRQPQ*SSLCCAFAKPAYQK
Trigger: TTTTTGATATGCTGGTTTTGCAAAAGCACAACACAGAGATGACCACTGCGGCTGGCGAAGCTTTCTACACGTTGGTGTGTTTGCACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGGTTCCAGCTCAAGACTaGATTGGCGAGTGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: SWHTELGEPGSCIKILIKVPAQD*IGECKV
Trigger: TACCTTGCACTCGCCAATCAAGTCTTGAGCTGGAAC...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCGAGAGGCCACACCATaGGCAGTCAAATTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITREATP*AVKFLV
Trigger: CACAAGAAATTTGACTGCCAATGGTGTGGCCTCTCG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTCCTACACTGGCCAGTaGATCAGAAAACTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITSYTGQ*IRKLVS
Trigger: CGAGACCAGTTTTCTGATCAACTGGCCAGTGTAGGA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCAGATCTGTTTGCTGCTaGACCTGGCTCATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITRSVCC*TWLMSS
Trigger: AGAGGACATGAGCCAGGTCAAGCAGCAAACAGATCT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCCTGTTTCTTGTGCTTTaGCACACTGTTCAGCTAACG +
Preference number: 5 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPLFLVL*HTVQLT
Trigger: CGTTAGCTGAACAGTGTGCAAAAGCACAAGAAACAG...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp CTCCATAACTCTGCTGTCCAGAAGAGTCTCCCGCCAGGACTCTGTTaGCTTCAACAGCACATTTTGCGAGGATTCAAACATAGCTATATA +
Preference number: 5 (lower is better)
Translates to: LHNSAVQKSLPPGLC*LQQHILRGFKHSYI
Trigger: TATATAGCTATGTTTGAATCCTCGCAAAATGTGCTGTTGAAGCCAACAGAGTCCTGGCGGGAGACTCTTCTGGACAGCAGAGTTATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTGGCAGTCAAATTTCTaGTGCCATCTGGAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITWQSNF*CHLEQL
Trigger: TAGCTGCTCCAGATGGCACAAGAAATTTGACTGCCA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCTGTTGTCAACAGTGCTaGAACCCGGTGAAGCAAGTA +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITCCQQC*NPVKQV
Trigger: TACTTGCTTCACCGGGTTCAAGCACTGTTGACAACA...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGCTTGCAGTGAGCTTGTaGAAGGCATCTGCTAATCTC +
Preference number: 5 (lower is better)
Translates to: SWHTELGEPGSCIKILIKLAVSL*KASANL
Trigger: GAGATTAGCAGATGCCTTCAACAAGCTCACTGCAAG...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCGGATCTGGGCAAATTTaGCAAATATGTTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPGSGQI*QICCHL
Trigger: CAGATGGCAACATATTTGCAAAATTTGCCCAGATCC...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 90 bp CCATACAACACAACATCCGCTGCTGACACAGATCTGTTTGCTGCTTaGCCTGGCTCATGTCCTCTAAACACTTCATCTGTATCACTGAAA +
Preference number: 5 (lower is better)
Translates to: PYNTTSAADTDLFAA*PGSCPLNTSSVSLK
Trigger: TTTCAGTGATACAGATGAAGTGTTTAGAGGACATGAGCCAGGTCAAGCAGCAAACAGATCTGTGTCAGCAGCGGATGTTGTGTTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp ATATGTGCAAAACCTCCTAAGACTAGAGCCTTCATCAATGTCCTCTaGACAGGACTTGACAAGAAATTAAGAGGTGGGCTTCGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ICAKPPKTRAFINVL*TGLDKKLRGGLRLA
Trigger: TGCAAGCCGAAGCCCACCTCTTAATTTCTTGTCAAGTCCTGTGCAGAGGACATTGATGAAGGCTCTAGTCTTAGGAGGTTTTGCACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp GTCTGCCCAAATTTGGAGGAAGAAAGTTCCAGCTCAAGACTTGATTaGCGAGTGCAAGGTAACGCTGAAATACTGAAGACATCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: VCPNLEEESSSSRLD*RVQGNAEILKTSEH
Trigger: ATGCTCAGATGTCTTCAGTATTTCAGCGTTACCTTGCACTCGCCAATCAAGTCTTGAGCTGGAACTTTCTTCCTCCAAATTTGGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGCCAGGAGATAAGTCTTaGCCCAGCGTTTTAAAAACC +
Preference number: 5 (lower is better)
Translates to: SWHTELGEPGSCIKILIKPGDKS*PSVLKT
Trigger: GGTTTTTAAAACGCTGGGCAAAGACTTATCTCCTGG...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACTGCTTGACTTCCTCTaGCTGACACATCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFALLDFL*LTHLLE
Trigger: TTCCAGCAGATGTGTCAGCAAGAGGAAGTCAAGCAG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCACTTCTATAATGAGATaGACAGTCTCTGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPTSIMR*TVSGVF
Trigger: GAATACCCCAGAGACTGTCAATCTCATTATAGAAGT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AGCTGGCACACTGAATTAGGGGAGCCTGGCAGCTGTATAAAAATCCTGATTAAGAAGCAGGTCTTGGTATaGCTCTTCTTCTGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: SWHTELGEPGSCIKILIKKQVLV*LFFCCN
Trigger: GTTACAGCAGAAGAAGAGCAATACCAAGACCTGCTT...CTTAATCAGGATTTTTATACAGCTGCCAGGCTCCCCTAATTCAGTGTGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCCTGGGTCTTGCTGACTaGATAGTAATGTTTCGACCA +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITLGLAD*IVMFRP
Trigger: TGGTCGAAACATTACTATCAAGTCAGCAAGACCCAG...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAGAAGCTGATGCCAAGTaGACCTCTCCTGTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFAEADAK*TSPVSL
Trigger: CAGTGAAACAGGAGAGGTCAACTTGGCATCAGCTTC...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTACTGTCAGGTAGTTTaGCTACTGAGGCAGCCACTC +
Preference number: 5 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHYCQVV*LLRQPL
Trigger: GAGTGGCTGCCTCAGTAGCAAAACTACCTGACAGTA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp GCCTTTGTAAGACATAGGTTAAAAGGAATGTTCGCAGAGACTCGATaGTACCTTTTTCCAAGAGAATCCACTCTCGGACAACTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: AFVRHRLKGMFAETR*YLFPRESTLGQLLP
Trigger: TGGAAGCAGTTGTCCGAGAGTGGATTCTCTTGGAAAAAGGTAGCATCGAGTCTCTGCGAACATTCCTTTTAACCTATGTCTTACAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS CCA 90 bp GAGGTATACAGTGTTCTGCAGCAATTCTTCCTAGCATTCCTACACTaGCCAGTTGATCAGAAAACTGGTCTCGATCATCCTCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: EVYSVLQQFFLAFLH*PVDQKTGLDHPLEV
Trigger: AACTTCAAGAGGATGATCGAGACCAGTTTTCTGATCAACTGGCCAGTGTAGGAATGCTAGGAAGAATTGCTGCAGAACACTGTATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp AATGGCAGACAACAGCCTAATCACAGAATCTGTTCTGTTGTACCCTaGGATGGAAGAAGCCTTTTCTCCTGGAGATCCCAAAATTTGAAG +
Preference number: 5 (lower is better)
Translates to: NGRQQPNHRICSVVP*DGRSLFSWRSQNLK
Trigger: CTTCAAATTTTGGGATCTCCAGGAGAAAAGGCTTCTTCCATCCCAGGGTACAACAGAACAGATTCTGTGATTAGGCTGTTGTCTGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAGTTTTGTCATGGCGCGTGGACCTGTCCAGTCAATTGTGTGTTTCAGTGCCCACTGACCATGGAGTCTaGTTACTCTTTCTTCTAATA +
Preference number: 5 (lower is better)
Translates to: IVLSWRVDLSSQLCVSVPTDHGV*LLFLLI
Trigger: TATTAGAAGAAAGAGTAACAAGACTCCATGGTCAGT...GGGCACTGAAACACACAATTGACTGGACAGGTCCACGCGCCATGACAAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCACTGCTTGCAGTGAGCTaGTTGAAGGCATCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFALLAVS*LKASAN
Trigger: ATTAGCAGATGCCTTCAACAAGCTCACTGCAAGCAG...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATTCTGAAGGTCTACAGTaGGGCCTAAGAATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHSEGLQ*GLRICL
Trigger: AAGGCAGATTCTTAGGCCCAACTGTAGACCTTCAGA...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATAATGTCTGCCCAAATTaGGAGGAAGAAAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHNVCPN*EEESSS
Trigger: GCTGGAACTTTCTTCCTCCAAATTTGGGCAGACATT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCATTCTTAGAATACACTaGCAACAAAGTAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITILRIH*QQSKAG
Trigger: GCCTGCCTTACTTTGTTGCAAGTGTATTCTAAGAAT...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACTGACACAGATCTGTTaGCTGCTTGACCTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLLTQIC*LLDLAH
Trigger: ATGAGCCAGGTCAAGCAGCAAACAGATCTGTGTCAG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGTGGTCATCTCTGTGTaGTGCTTTTGCAAAACCAGC +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANVVISV*CFCKTS
Trigger: GCTGGTTTTGCAAAAGCACAACACAGAGATGACCAC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTGGCGTTGTTCATTATaGACCATGGAAGGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMWRCSL*TMEGGA
Trigger: GGCACCACCTTCCATGGTCAATAATGAACAACGCCA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCCTGCAGTCTACCAGTTCAAGTAGCTTTACCAGGTCAGTCCTTAGAAATAACCGTTTCCAAAATATGCTaGCAAACTGCAAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: PCSLPVQVALPGQSLEITVSKIC*QTANGD
Trigger: ATCACCATTTGCAGTTTGCAAGCATATTTTGGAAAC...GGTTATTTCTAAGGACTGACCTGGTAAAGCTACTTGAACTGGTAGACTGCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAAACAGGATTGCTACGTaGTCAATCTGGGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAANRIAT*SIWVAS
Trigger: TGAGGCTACCCAGATTGACAACGTAGCAATCCTGTT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGATTAAGCCAGTGTTCTaGACACCCACTGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMIKPVF*TPTGPR
Trigger: TCTTGGCCCAGTGGGTGTCAAGAACACTGGCTTAAT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp GGTGATTTTGATTTCCTAAATGATAAGAATATGTGCTCTGCATGCTaGCGTTGTTCATTATTGACCATGGAAGGTGGTGCCATCAGAACT +
Preference number: 5 (lower is better)
Translates to: GDFDFLNDKNMCSAC*RCSLLTMEGGAIRT
Trigger: AGTTCTGATGGCACCACCTTCCATGGTCAATAATGAACAACGCCAGCATGCAGAGCACATATTCTTATCATTTAGGAAATCAAAATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCTCTGCATGCTGGCGTaGTTCATTATTGACCATGGA +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMLCMLA*FIIDHG
Trigger: TCCATGGTCAATAATGAACAACGCCAGCATGCAGAG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAAACACGGTTATCAGGTaGCTGATAATGCTGGAGATC +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAANTVIR*LIMLEI
Trigger: GATCTCCAGCATTATCAGCAACCTGATAACCGTGTT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAACAGAATCTGTTCTGTaGTACCCTGGGATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAATESVL*YPGMEE
Trigger: TTCTTCCATCCCAGGGTACAACAGAACAGATTCTGT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGTCCAATACTGCTGTTaGGTTTCTGTGTCCATATGT +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANVQYCC*VSVSIC
Trigger: ACATATGGACACAGAAACCAAACAGCAGTATTGGAC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAAATGAGAAGCAGGTCTaGGTATTGCTCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLNEKQV*VLLFFC
Trigger: GCAGAAGAAGAGCAATACCAAGACCTGCTTCTCATT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CCTGTCAAAGGCATCACTCATAAGCAACCGAATTGTATTTTTGGAGAGCACCATACTGATTACAAAGGGTaGGAAACTTCAAGAGATCCT +
Preference number: 5 (lower is better)
Translates to: PVKGITHKQPNCIFGEHHTDYKG*ETSRDP
Trigger: AGGATCTCTTGAAGTTTCCAACCCTTTGTAATCAGT...ATGGTGCTCTCCAAAAATACAATTCGGTTGCTTATGAGTGATGCCTTTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTACATCACATGCACAGGTaGGATGTAATTCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLHHMHR*DVIQML
Trigger: GAGCATCTGAATTACATCCAACCTGTGCATGTGATG...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAAACTTGATTATAGTTTaGTCATGGCGCGTGGACCTG +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLNLIIV*SWRVDL
Trigger: CAGGTCCACGCGCCATGACAAAACTATAATCAAGTT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp AATGGTGATTTTGATTTCCTAAATGATAAGAATATGTGCTCTGCATaGTGGCGTTGTTCATTATTGACCATGGAAGGTGGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: NGDFDFLNDKNMCSA*WRCSLLTMEGGAIR
Trigger: TCTGATGGCACCACCTTCCATGGTCAATAATGAACAACGCCAGCATGCAGAGCACATATTCTTATCATTTAGGAAATCAAAATCACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS GCA 90 bp AGTGAATATCTTCATAGAGATCATCAAGCATTTTGTTGTCAACAGTaGTTGAACCCGGTGAAGCAAGTAACTGTTGCTGATGTCGTTGTA +
Preference number: 5 (lower is better)
Translates to: SEYLHRDHQAFCCQQ*LNPVKQVTVADVVV
Trigger: TACAACGACATCAGCAACAGTTACTTGCTTCACCGGGTTCAAGCACTGTTGACAACAAAATGCTTGATGATCTCTATGAAGATATTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp AGCAGGTTAGTAAGAAGTTCCATAATGAGAAGCAGGTCTTGGTATTaGTCTTCTTCTGCTGTAACATCTATTCTTTGCCGCCCTAAATTA +
Preference number: 5 (lower is better)
Translates to: SRLVRSSIMRSRSWY*SSSAVTSILCRPKL
Trigger: TAATTTAGGGCGGCAAAGAATAGATGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCTTCTCATTATGGAACTTCTTACTAACCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGTCTCGATCATCCTCTaGAAGTTCACTTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANVSIIL*KFTYFF
Trigger: GAAGAAATAAGTGAACTTCAAGAGGATGATCGAGAC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTATCATCAAGCATTTTGTaGTCAACAGTGCTTGAACCC +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLSSSIL*STVLEP
Trigger: GGGTTCAAGCACTGTTGACAACAAAATGCTTGATGA...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCTCTGTGTTGTGCTTTaGCAAAACCAGCATATCAAA +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANLCVVL*QNQHIK
Trigger: TTTGATATGCTGGTTTTGCAAAAGCACAACACAGAG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGGTGCCCATATCTGTTaGCACATATATGGAATTTCA +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANGAHIC*HIYGIS
Trigger: TGAAATTCCATATATGTGCAAACAGATATGGGCACC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGTGTTTCAGTGCCCTTaGGTAAAGAGACTGTACTTA +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAVFQCP*VKRLYL
Trigger: TAAGTACAGTCTCTTTACCAAAGGGCACTGAAACAC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACTGTATGGCCCCACACTaGGTAATGAAAGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANCMAPH*VMKETK
Trigger: TTTTGTTTCTTTCATTACCAAGTGTGGGGCCATACA...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp CTGAGGAATAGGACAAGACTCAAGTCAACTTTCAGCAATTCAGTGCACTTTGCAACTACTCAATACATCTaGGGCTTTCTTAAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LRNRTRLKSTFSNSVHFATTQYI*GFLKGV
Trigger: TACACCTTTAAGAAAGCCCAAGATGTATTGAGTAGT...TGCAAAGTGCACTGAATTGCTGAAAGTTGACTTGAGTCTTGTCCTATTCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 90 bp TACCCTGGGATGGAAGAAGCCTTTTCTCCTGGAGATCCCAAAATTTaGAGTGTTGTATTAATGTCAACTTCAGATGAATGCTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: YPGMEEAFSPGDPKI*SVVLMSTSDECLME
Trigger: TTCCATTAAGCATTCATCTGAAGTTGACATTAATACAACACTTCAAATTTTGGGATCTCCAGGAGAAAAGGCTTCTTCCATCCCAGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp CAAACTGCAAATGGTGATTTTGATTTCCTAAATGATAAGAATATGTaGTCTGCATGCTGGCGTTGTTCATTATTGACCATGGAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: QTANGDFDFLNDKNM*SACWRCSLLTMEGG
Trigger: ACCACCTTCCATGGTCAATAATGAACAACGCCAGCATGCAGAGCACATATTCTTATCATTTAGGAAATCAAAATCACCATTTGCAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS GCA 90 bp AGCAGGTCTTGGTATTGCTCTTCTTCTGCTGTAACATCTATTCTTTaGCGCCCTAAATTATTCTTAGAATACACTTGCAACAAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: SRSWYCSSSAVTSIL*RPKLFLEYTCNKVR
Trigger: CCTTACTTTGTTGCAAGTGTATTCTAAGAATAATTTAGGGCGGCAAAGAATAGATGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGCTTCAACAGCACATTTaGCGAGGATTCAAACATAGC +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMLQQHI*RGFKHS
Trigger: GCTATGTTTGAATCCTCGCAAAATGTGCTGTTGAAG...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACAGATCATCAAGCATTTaGTTGTCAACAGTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANRSSSI*LSTVLE
Trigger: TTCAAGCACTGTTGACAACAAAATGCTTGATGATCT...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGAACCAAACAATATCTTaGCCCATCTGGGGACTTAGT +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMNQTIS*PIWGLS
Trigger: ACTAAGTCCCCAGATGGGCAAAGATATTGTTTGGTT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACGCAATTCAGTGCACTTaGCAGAAAGGATCTAAATTA +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANAIQCT*QKGSKL
Trigger: TAATTTAGATCCTTTCTGCAAAGTGCACTGAATTGC...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp ATAAACCTACATAAATACACGATCGAAAGGGGCAACAGGTTCATAGCAGCTAACCATATATATGACAGATaGTGGCTAACACTTAACAGC +
Preference number: 5 (lower is better)
Translates to: INLHKYTIERGNRFIAANHIYDR*WLTLNS
Trigger: GCTGTTAAGTGTTAGCCACAATCTGTCATATATATG...GTTAGCTGCTATGAACCTGTTGCCCCTTTCGATCGTGTATTTATGTAGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGGGTTCAGAATGATGTaGAATACTAGGAGACTCAAA +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAGFRMM*NTRRLK
Trigger: TTTGAGTCTCCTAGTATTCAACATCATTCTGAACCC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAGCATTTCACATCAATTaGAGCTCAGCAATATGCCTA +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAAFHIN*SSAICL
Trigger: TAGGCATATTGCTGAGCTCAAATTGATGTGAAATGC...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp TACCTAACATCACATGCACAGGTTGGATGTAATTCAGATGCTCCAGTTTTGTTAAAACCTCCGAACTCATaGATGTCATTCCTAATTCTA +
Preference number: 5 (lower is better)
Translates to: YLTSHAQVGCNSDAPVLLKPPNS*MSFLIL
Trigger: TAGAATTAGGAATGACATCAATGAGTTCGGAGGTTT...TAACAAAACTGGAGCATCTGAATTACATCCAACCTGTGCATGTGATGTTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGATTTATTTGGGACCTTaGAAATCATCTGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMIYLGP*KSSVGL
Trigger: GAGACCCACAGATGATTTCAAAGGTCCCAAATAAAT...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp AAGTTCAGGCATCAGAGTATGATTAGTGACTTGTATTACACAAAACCTGCAGCAAAACTGAACTGCCATTaGAGATTACATAGAATGCAC +
Preference number: 5 (lower is better)
Translates to: KFRHQSMISDLYYTKPAAKLNCH*RLHRMH
Trigger: GTGCATTCTATGTAATCTCAAATGGCAGTTCAGTTT...TGCTGCAGGTTTTGTGTAATACAAGTCACTAATCATACTCTGATGCCTGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 90 bp GTAACATCTATTCTTTGCCGCCCTAAATTATTCTTAGAATACACTTaGAACAAAGTAAGGCAGGCTTCATATAAGTTCATAGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: VTSILCRPKLFLEYT*NKVRQASYKFIALD
Trigger: GTCCAAAGCTATGAACTTATATGAAGCCTGCCTTACTTTGTTGCAAGTGTATTCTAAGAATAATTTAGGGCGGCAAAGAATAGATGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS-3UTR CAA 90 bp GGGAGGAACACTTATAAACTCATGATATGGATAACAGACCTGTGGAAATTAATGTTCTTAAAGGTGTATTaGAAGCCTAAGATTAGGCAG +
Preference number: 5 (lower is better)
Translates to: GRNTYKLMIWITDLWKLMFLKVY*KPKIRQ
Trigger: CTGCCTAATCTTAGGCTTCAAATACACCTTTAAGAA...CATTAATTTCCACAGGTCTGTTATCCATATCATGAGTTTATAAGTGTTCCTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 90 bp ATGTGCAACTTCAACAAAAACTTCTATAATGAGATTGACAGTCTCTaGGGTATTCTTGTAAACTTCCATCAATCCAATGCAATTGGTAAG +
Preference number: 5 (lower is better)
Translates to: MCNFNKNFYNEIDSL*GILVNFHQSNAIGK
Trigger: CTTACCAATTGCATTGGATTGATGGAAGTTTACAAGAATACCCCAGAGACTGTCAATCTCATTATAGAAGTTTTTGTTGAAGTTGCACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp GGTGGTGCCATCAGAACTTTAGCCGCGTTCTCCAGCTaGGCGATCACTTCTGGGGGCCCCAGCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GGAIRTLAAFSS*AITSGGPSAAA
Trigger: GGCGGCGGCGCTGGGGCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCTAAAGTTCTGATGGCACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS CCA 72 bp CGATCACTTCTGGGGGCCCCAGCGCCGCCGCCATCATaGTCTCTCTTCAATGACGCGCCATGCGCTGCATTC +
Preference number: 6 (lower is better)
Translates to: RSLLGAPAPPPS*SLFNDAPCAAF
Trigger: GAATGCAGCGCATGGCGCGTCATTGAAGAGAGACCATGATGGCGGCGGCGCTGGGGCCCCCAGAAGTGATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS CCA 72 bp TCTGCTGTCCAGAAGAGTCTCCCGCCAGGACTCTGTTaGCTTCAACAGCACATTTTGCGAGGATTCAAACAT +
Preference number: 6 (lower is better)
Translates to: SAVQKSLPPGLC*LQQHILRGFKH
Trigger: ATGTTTGAATCCTCGCAAAATGTGCTGTTGAAGCCAACAGAGTCCTGGCGGGAGACTCTTCTGGACAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp AACACACCAACGTGTAGAAAGCTTCGCCAGCCGCAGTaGTCATCTCTGTGTTGTGCTTTTGCAAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: NTPTCRKLRQPQ*SSLCCAFAKPA
Trigger: TGCTGGTTTTGCAAAAGCACAACACAGAGATGACCACTGCGGCTGGCGAAGCTTTCTACACGTTGGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 90 bp AGTGCCGTGTTGCTAGAAAAAGTGGTGAGTCTGTTTCTTGTGCTTTaGCACACTGTTCAGCTAACGGTGTCAAGGCCTCCAGGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: SAVLLEKVVSLFLVL*HTVQLTVSRPPGKA
Trigger: AGCTTTGCCTGGAGGCCTTGACACCGTTAGCTGAACAGTGTGCAAAAGCACAAGAAACAGACTCACCACTTTTTCTAGCAACACGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp TCAACTTGTGATCCTTCATCTGGGAAGATGGGTCCATaGAGAGAAGCTAACTGGGCAAGGCACTGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: STCDPSSGKMGP*REANWARHCRE
Trigger: TTCTCTGCAGTGCCTTGCCCAGTTAGCTTCTCTTCATGGACCCATCTTCCCAGATGAAGGATCACAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp CCAAGAGAATCCACTCTCGGACAACTGCTTCCATTATaGCTGTGGCAGCTTGAAAGAGGACATAGTCCACTT +
Preference number: 6 (lower is better)
Translates to: PRESTLGQLLPL*LWQLERGHSPL
Trigger: AAGTGGACTATGTCCTCTTTCAAGCTGCCACAGCCATAATGGAAGCAGTTGTCCGAGAGTGGATTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS CAA 90 bp GTAGAAAGCTTCGCCAGCCGCAGTGGTCATCTCTGTGTTGTGCTTTaGCAAAACCAGCATATCAAAAACCAGCTTAAGAAAGTGCCGTGT +
Preference number: 6 (lower is better)
Translates to: VESFASRSGHLCVVL*QNQHIKNQLKKVPC
Trigger: ACACGGCACTTTCTTAAGCTGGTTTTTGATATGCTGGTTTTGCAAAAGCACAACACAGAGATGACCACTGCGGCTGGCGAAGCTTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp ACAACATCCGCTGCTGACACAGATCTGTTTGCTGCTTaGCCTGGCTCATGTCCTCTAAACACTTCATCTGTA +
Preference number: 6 (lower is better)
Translates to: TTSAADTDLFAA*PGSCPLNTSSV
Trigger: TACAGATGAAGTGTTTAGAGGACATGAGCCAGGTCAAGCAGCAAACAGATCTGTGTCAGCAGCGGATGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp CAACAGCCTAATCACAGAATCTGTTCTGTTGTACCCTaGGATGGAAGAAGCCTTTTCTCCTGGAGATCCCAA +
Preference number: 6 (lower is better)
Translates to: QQPNHRICSVVP*DGRSLFSWRSQ
Trigger: TTGGGATCTCCAGGAGAAAAGGCTTCTTCCATCCCAGGGTACAACAGAACAGATTCTGTGATTAGGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp CTCCCGCCAGGACTCTGTTGGCTTCAACAGCACATTTaGCGAGGATTCAAACATAGCTATATAATGTCTGCC +
Preference number: 6 (lower is better)
Translates to: LPPGLCWLQQHI*RGFKHSYIMSA
Trigger: GGCAGACATTATATAGCTATGTTTGAATCCTCGCAAAATGTGCTGTTGAAGCCAACAGAGTCCTGGCGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 90 bp CAGAAGAGTCTCCCGCCAGGACTCTGTTGGCTTCAACAGCACATTTaGCGAGGATTCAAACATAGCTATATAATGTCTGCCCAAATTTGG +
Preference number: 6 (lower is better)
Translates to: QKSLPPGLCWLQQHI*RGFKHSYIMSAQIW
Trigger: CCAAATTTGGGCAGACATTATATAGCTATGTTTGAATCCTCGCAAAATGTGCTGTTGAAGCCAACAGAGTCCTGGCGGGAGACTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp CTAGATAATCAACTTGTGATCCTTCATCTGGGAAGATaGGTCCATGAAGAGAAGCTAACTGGGCAAGGCACT +
Preference number: 6 (lower is better)
Translates to: LDNQLVILHLGR*VHEEKLTGQGT
Trigger: AGTGCCTTGCCCAGTTAGCTTCTCTTCATGGACCCATCTTCCCAGATGAAGGATCACAAGTTGATTATCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp AGTGTTCTGCAGCAATTCTTCCTAGCATTCCTACACTaGCCAGTTGATCAGAAAACTGGTCTCGATCATCCT +
Preference number: 6 (lower is better)
Translates to: SVLQQFFLAFLH*PVDQKTGLDHP
Trigger: AGGATGATCGAGACCAGTTTTCTGATCAACTGGCCAGTGTAGGAATGCTAGGAAGAATTGCTGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp GCAGTTAAAACATTTCGTGGGAACACGGTTATCAGGTaGCTGATAATGCTGGAGATCCCCACAGCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: AVKTFRGNTVIR*LIMLEIPTASE
Trigger: TTCTGAAGCTGTGGGGATCTCCAGCATTATCAGCAACCTGATAACCGTGTTCCCACGAAATGTTTTAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp TTGCTAGAAAAAGTGGTGAGTCTGTTTCTTGTGCTTTaGCACACTGTTCAGCTAACGGTGTCAAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LLEKVVSLFLVL*HTVQLTVSRPP
Trigger: TGGAGGCCTTGACACCGTTAGCTGAACAGTGTGCAAAAGCACAAGAAACAGACTCACCACTTTTTCTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp AGAACCCTCTGTATCTGCTCCGAACGCTGTACTGAATaGCAGACTTATCTGATCATACAGTTTTTCATCCAC +
Preference number: 6 (lower is better)
Translates to: RTLCICSERCTE*QTYLIIQFFIH
Trigger: GTGGATGAAAAACTGTATGATCAGATAAGTCTGCCATTCAGTACAGCGTTCGGAGCAGATACAGAGGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp GAAGTGGCTGAAGAACCTCTGTCCAATACTGCTGTTTaGTTTCTGTGTCCATATGTGCAAAACCTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: EVAEEPLSNTAV*FLCPYVQNLLR
Trigger: TCTTAGGAGGTTTTGCACATATGGACACAGAAACCAAACAGCAGTATTGGACAGAGGTTCTTCAGCCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp TTCGCCAGCCGCAGTGGTCATCTCTGTGTTGTGCTTTaGCAAAACCAGCATATCAAAAACCAGCTTAAGAAA +
Preference number: 6 (lower is better)
Translates to: FASRSGHLCVVL*QNQHIKNQLKK
Trigger: TTTCTTAAGCTGGTTTTTGATATGCTGGTTTTGCAAAAGCACAACACAGAGATGACCACTGCGGCTGGCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 90 bp CTTGGAATGGCAGTTAAAACATTTCGTGGGAACACGGTTATCAGGTaGCTGATAATGCTGGAGATCCCCACAGCTTCAGAATCTTCTATT +
Preference number: 6 (lower is better)
Translates to: LGMAVKTFRGNTVIR*LIMLEIPTASESSI
Trigger: AATAGAAGATTCTGAAGCTGTGGGGATCTCCAGCATTATCAGCAACCTGATAACCGTGTTCCCACGAAATGTTTTAACTGCCATTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp CTGGGCAAGGCACTGCAGAGAATCTTGTGCCATATCTaGATCTTCTCTGATTTTTCGATGTACTGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LGKALQRILCHI*IFSDFSMYCEE
Trigger: TTCTTCACAGTACATCGAAAAATCAGAGAAGATTCAGATATGGCACAAGATTCTCTGCAGTGCCTTGCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp AGTGAGATCTGCTCTTATTGCTCGAGATTCAACTTCTaGAACTCTGAGAATGGCAGACAACAGCCTAATCAC +
Preference number: 6 (lower is better)
Translates to: SEICSYCSRFNF*NSENGRQQPNH
Trigger: GTGATTAGGCTGTTGTCTGCCATTCTCAGAGTTTCAGAAGTTGAATCTCGAGCAATAAGAGCAGATCTCACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp CAATATCTTTGCCCATCTGGGGACTTAGTAGATGAGTaGGATCTGCTCTTATTGCTCGAGATTCAACTTCTG +
Preference number: 6 (lower is better)
Translates to: QYLCPSGDLVDE*DLLLLLEIQLL
Trigger: CAGAAGTTGAATCTCGAGCAATAAGAGCAGATCTCACTCATCTACTAAGTCCCCAGATGGGCAAAGATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS TCA 72 bp ACTGAGAACCCTCTGTATCTGCTCCGAACGCTGTACTaGATGGCAGACTTATCTGATCATACAGTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: TENPLYLLRTLY*MADLSDHTVFH
Trigger: ATGAAAAACTGTATGATCAGATAAGTCTGCCATTCAGTACAGCGTTCGGAGCAGATACAGAGGGTTCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 72 bp AGACATAGGTTAAAAGGAATGTTCGCAGAGACTCGATaGTACCTTTTTCCAAGAGAATCCACTCTCGGACAA +
Preference number: 6 (lower is better)
Translates to: RHRLKGMFAETR*YLFPRESTLGQ
Trigger: TTGTCCGAGAGTGGATTCTCTTGGAAAAAGGTAGCATCGAGTCTCTGCGAACATTCCTTTTAACCTATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255305.10
ENST00000490513.1
CDS CCA 72 bp GATTTCCTAAATGATAAGAATATGTGCTCTGCATGCTaGCGTTGTTCATTATTGACCATGGAAGGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: DFLNDKNMCSAC*RCSLLTMEGGA
Trigger: GGCACCACCTTCCATGGTCAATAATGAACAACGCCAGCATGCAGAGCACATATTCTTATCATTTAGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS CCA 72 bp AATTTGGAGGAAGAAAGTTCCAGCTCAAGACTTGATTaGCGAGTGCAAGGTAACGCTGAAATACTGAAGACA +
Preference number: 6 (lower is better)
Translates to: NLEEESSSSRLD*RVQGNAEILKT
Trigger: TGTCTTCAGTATTTCAGCGTTACCTTGCACTCGCCAATCAAGTCTTGAGCTGGAACTTTCTTCCTCCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp CATAGAGATCATCAAGCATTTTGTTGTCAACAGTGCTaGAACCCGGTGAAGCAAGTAACTGTTGCTGATGTC +
Preference number: 6 (lower is better)
Translates to: HRDHQAFCCQQC*NPVKQVTVADV
Trigger: GACATCAGCAACAGTTACTTGCTTCACCGGGTTCAAGCACTGTTGACAACAAAATGCTTGATGATCTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 72 bp CTTCATAGAGATCATCAAGCATTTTGTTGTCAACAGTaGTTGAACCCGGTGAAGCAAGTAACTGTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: LHRDHQAFCCQQ*LNPVKQVTVAD
Trigger: ATCAGCAACAGTTACTTGCTTCACCGGGTTCAAGCACTGTTGACAACAAAATGCTTGATGATCTCTATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 72 bp GTAAGAAGTTCCATAATGAGAAGCAGGTCTTGGTATTaGTCTTCTTCTGCTGTAACATCTATTCTTTGCCGC +
Preference number: 6 (lower is better)
Translates to: VRSSIMRSRSWY*SSSAVTSILCR
Trigger: GCGGCAAAGAATAGATGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCTTCTCATTATGGAACTTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 90 bp GAATATCTTCATAGAGATCATCAAGCATTTTGTTGTCAACAGTGCTaGAACCCGGTGAAGCAAGTAACTGTTGCTGATGTCGTTGTAACT +
Preference number: 6 (lower is better)
Translates to: EYLHRDHQAFCCQQC*NPVKQVTVADVVVT
Trigger: AGTTACAACGACATCAGCAACAGTTACTTGCTTCACCGGGTTCAAGCACTGTTGACAACAAAATGCTTGATGATCTCTATGAAGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 72 bp AGTAAGAAGTTCCATAATGAGAAGCAGGTCTTGGTATaGCTCTTCTTCTGCTGTAACATCTATTCTTTGCCG +
Preference number: 6 (lower is better)
Translates to: SKKFHNEKQVLV*LFFCCNIYSLP
Trigger: CGGCAAAGAATAGATGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCTTCTCATTATGGAACTTCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 72 bp TTTGATTTCCTAAATGATAAGAATATGTGCTCTGCATaGTGGCGTTGTTCATTATTGACCATGGAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: FDFLNDKNMCSA*WRCSLLTMEGG
Trigger: ACCACCTTCCATGGTCAATAATGAACAACGCCAGCATGCAGAGCACATATTCTTATCATTTAGGAAATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255305.10
ENST00000465018.1
ENST00000490513.1
CDS CAA 72 bp CAGGTTAGTAAGAAGTTCCATAATGAGAAGCAGGTCTaGGTATTGCTCTTCTTCTGCTGTAACATCTATTCT +
Preference number: 6 (lower is better)
Translates to: QVSKKFHNEKQV*VLLFFCCNIYS
Trigger: AGAATAGATGTTACAGCAGAAGAAGAGCAATACCAAGACCTGCTTCTCATTATGGAACTTCTTACTAACCTG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CAA 90 bp AAGCAAGTAACTGTTGCTGATGTCGTTGTAACTGACCATGGAGTCTaGTTACTCTTTCTTCTAATAAACTTGTCAGAAGAGGTATACAGT +
Preference number: 6 (lower is better)
Translates to: KQVTVADVVVTDHGV*LLFLLINLSEEVYS
Trigger: ACTGTATACCTCTTCTGACAAGTTTATTAGAAGAAAGAGTAACAAGACTCCATGGTCAGTTACAACGACATCAGCAACAGTTACTTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS GCA 72 bp TGGTATTGCTCTTCTTCTGCTGTAACATCTATTCTTTaGCGCCCTAAATTATTCTTAGAATACACTTGCAAC +
Preference number: 6 (lower is better)
Translates to: WYCSSSAVTSIL*RPKLFLEYTCN
Trigger: GTTGCAAGTGTATTCTAAGAATAATTTAGGGCGGCAAAGAATAGATGTTACAGCAGAAGAAGAGCAATACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255305.10
CDS CCA 72 bp TTCAACAAAAACTTCTATAATGAGATTGACAGTCTCTaGGGTATTCTTGTAAACTTCCATCAATCCAATGCA +
Preference number: 6 (lower is better)
Translates to: FNKNFYNEIDSL*GILVNFHQSNA
Trigger: TGCATTGGATTGATGGAAGTTTACAAGAATACCCCAGAGACTGTCAATCTCATTATAGAAGTTTTTGTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255305.10