RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPNPEP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196236

Ensembl transcript IDs: ENST00000357137.9, ENST00000417688.5, ENST00000428799.1, ENST00000465258.1, ENST00000482652.1, ENST00000614001.1

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACACGTGCAGGGCTGCCAGAAGACACCCATTTTGAACCTGAGGTaGATGTGGGCCGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCT +
Preference number: 1 (lower is better)
Translates to: AHVQGCQKTPILNLR*MWAAVKVKKPGCIS
Trigger: AGATATGCAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 90 bp GCGTATAGGCTTCGTCTACTCCAGTTAGAGCTATTGCTCCATCAGTaGCAGATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCC +
Preference number: 1 (lower is better)
Translates to: AYRLRLLQLELLLHQ*QIADHPKVLDWDLA
Trigger: GGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 90 bp GTGCAGGGCTGCCAGAAGACACCCATTTTGAACCTGAGGTGCATGTaGGCCGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAA +
Preference number: 1 (lower is better)
Translates to: VQGCQKTPILNLRCM*AAVKVKKPGCISVQ
Trigger: TTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTGGCAGCCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp TCAGCTTCCCAGCAATCTGCATTCGTTCAATTTCTGCAGGAGACTTaGTCAGCCGGAGGCGCTGTATCAGCTGCTGAACACCCCGAACCT +
Preference number: 1 (lower is better)
Translates to: SASQQSAFVQFLQET*SAGGAVSAAEHPEP
Trigger: AGGTTCGGGGTGTTCAGCAGCTGATACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAATTGAACGAATGCAGATTGCTGGGAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 90 bp AAAGGAAACACAATCCAAGGAAAGGGCTGTTGGGGGCACAGAGCCTaGGAAGTGAGCAGCCAGAGCTGTGGAGTTATTTCCCTCCCCTTT +
Preference number: 1 (lower is better)
Translates to: KGNTIQGKGCWGHRA*EVSSQSCGVISLPF
Trigger: AAAGGGGAGGGAAATAACTCCACAGCTCTGGCTGCTCACTTCCCAGGCTCTGTGCCCCCAACAGCCCTTTCCTTGGATTGTGTTTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp ACCGCTGGACTGGTGAACAGCTCACTGTGCTTTCTTCTCCATCTCTaGCATGGGAACAGGAGGGGGAGAAGCAGCATTTGTGCTTCACAT +
Preference number: 1 (lower is better)
Translates to: TAGLVNSSLCFLLHL*HGNRRGRSSICASH
Trigger: ATGTGAAGCACAAATGCTGCTTCTCCCCCTCCTGTTCCCATGTCAGAGATGGAGAAGAAAGCACAGTGAGCTGTTCACCAGTCCAGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp GGCCTCAGTCAGGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTaGGGGCCTCATCCAGTCATACCAAACCATGTTCGTCTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: GLSQGLHIVRVKLCM*GPHPVIPNHVRLSF
Trigger: AAAGCTGAGACGAACATGGTTTGGTATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCCTGACTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 90 bp TTGCTCCATCAGTGCCAGATCGCGGACCATCCCAAAGTTCTCGACTaGGATCTCGCCGAGGCACAAAAAGTATGGCTTTGTGTGATGGTA +
Preference number: 1 (lower is better)
Translates to: LLHQCQIADHPKVLD*DLAEAQKVWLCVMV
Trigger: TACCATCACACAAAGCCATACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCACTGATGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 90 bp GTATCAGCTGCTGAACACCCCGAACCTTGTTCTTGCTCTTGGCTTTaGCCTCAGTCAGGGGCTGCATATAGTCAGAGTGAAGCTGTGCAT +
Preference number: 1 (lower is better)
Translates to: VSAAEHPEPCSCSWL*PQSGAAYSQSEAVH
Trigger: ATGCACAGCTTCACTCTGACTATATGCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGAACAAGGTTCGGGGTGTTCAGCAGCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 90 bp AACCTGAGGTGCATGTGGGCCGCAGTGAAGGTCAAGAAGCCTGGCTaGATATCTGTTCAATGTCATTCATCTCTTTGGGACAGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: NLRCMWAAVKVKKPG*ISVQCHSSLWDSLQ
Trigger: CTGCAGACTGTCCCAAAGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCTCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp TTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTaGACAGCTCACTGTGCTTTCTTCTCCATCTCTGACATGGGAACA +
Preference number: 1 (lower is better)
Translates to: LETLLQRTPRSPLDW*TAHCAFFSISDMGT
Trigger: TGTTCCCATGTCAGAGATGGAGAAGAAAGCACAGTGAGCTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 90 bp TGGACTGGTGAACAGCTCACTGTGCTTTCTTCTCCATCTCTGACATaGGAACAGGAGGGGGAGAAGCAGCATTTGTGCTTCACATTTCTG +
Preference number: 1 (lower is better)
Translates to: WTGEQLTVLSSPSLT*EQEGEKQHLCFTFL
Trigger: CAGAAATGTGAAGCACAAATGCTGCTTCTCCCCCTCCTGTTCCCATGTCAGAGATGGAGAAGAAAGCACAGTGAGCTGTTCACCAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp TTCATCTCTTTGGGACAGTCTGCAGAAAGGATGAGAGGTGAGTCCTaGGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGA +
Preference number: 1 (lower is better)
Translates to: FISLGQSAERMRGES*VTTTSSSIRTPRPR
Trigger: TCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCTGCAGACTGTCCCAAAGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 90 bp TCTGCCCTTGAGCTTCCTTCTGGATCAGAGACATTAGTTTGTGTCTaGGAAGTGCATATTCCACCTGAGATAGTCCTGGAGTTACCTCCC +
Preference number: 1 (lower is better)
Translates to: SALELPSGSETLVCV*EVHIPPEIVLELPP
Trigger: GGGAGGTAACTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTCTCTGATCCAGAAGGAAGCTCAAGGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 90 bp AGAAGTTATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTaGACTGGTGAACAGCTCACTGTGCTTTCTTCTCCATCTCTGACA +
Preference number: 1 (lower is better)
Translates to: RSYWKHCYKGLRGHR*TGEQLTVLSSPSLT
Trigger: TGTCAGAGATGGAGAAGAAAGCACAGTGAGCTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp TCCAGTGGGTCCTCTGATTCAAACAATAATGATGCTCAAACTCAGTaGCACACAGGTAGAGAACAGCAGCACAACCAGGAGAACCCATGT +
Preference number: 1 (lower is better)
Translates to: SSGSSDSNNNDAQTQ*HTGREQQHNQENPC
Trigger: ACATGGGTTCTCCTGGTTGTGCTGCTGTTCTCTACCTGTGTGTCACTGAGTTTGAGCATCATTATTGTTTGAATCAGAGGACCCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 90 bp CACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTaGGGCATCTTTGTCATCCTCTGGAATATAAATGCCGGGCTCAAT +
Preference number: 1 (lower is better)
Translates to: HYIILNSYTKTPKLL*GIFVILWNINAGLN
Trigger: ATTGAGCCCGGCATTTATATTCCAGAGGATGACAAAGATGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp AATGTCATTCATCTCTTTGGGACAGTCTGCAGAAAGGATGAGAGGTaGGTCCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAG +
Preference number: 1 (lower is better)
Translates to: NVIHLFGTVCRKDER*VLSHHYIILNSYTK
Trigger: CTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCTGCAGACTGTCCCAAAGAGATGAATGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp ATTAGCACTAGAGGAAATCACAGAATGATAACAGGGGTACTTCTCTaGAAACTGGGCGCTACTACTGTGACTCTGACAGGGTACGTAAGT +
Preference number: 1 (lower is better)
Translates to: ISTRGNHRMITGVLL*KLGATTVTLTGYVS
Trigger: ACTTACGTACCCTGTCAGAGTCACAGTAGTAGCGCCCAGTTTTCAGAGAAGTACCCCTGTTATCATTCTGTGATTTCCTCTAGTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp TGGATCAGAGACATTAGTTTGTGTCTGCGAAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACCTCCCCTTACAGCTTTGAAAAACTC +
Preference number: 1 (lower is better)
Translates to: WIRDISLCLRSAYST*DSPGVTSPYSFEKL
Trigger: GAGTTTTTCAAAGCTGTAAGGGGAGGTAACTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTCTCTGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp AAAAGTATGGCTTTGTGTGATGGTAATTGTTTGCCAGGGAGGCTCTaGAGGACAAGAATGCTATCAGGCTCTTGGAATCCACATAGGTAC +
Preference number: 1 (lower is better)
Translates to: KSMALCDGNCLPGRL*RTRMLSGSWNPHRY
Trigger: GTACCTATGTGGATTCCAAGAGCCTGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAAACAATTACCATCACACAAAGCCATACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 90 bp TCTCCATCTCTGACATGGGAACAGGAGGGGGAGAAGCAGCATTTGTaGTTCACATTTCTGATCTCTGTATTATTAACAAAGCTGAACAGG +
Preference number: 1 (lower is better)
Translates to: SPSLTWEQEGEKQHL*FTFLISVLLTKLNR
Trigger: CCTGTTCAGCTTTGTTAATAATACAGAGATCAGAAATGTGAAGCACAAATGCTGCTTCTCCCCCTCCTGTTCCCATGTCAGAGATGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR GCA 90 bp TGTGTGATGGTAATTGTTTGCCAGGGAGGCTCTGAAGGACAAGAATaGTATCAGGCTCTTGGAATCCACATAGGTACAGGAAATTGTTGT +
Preference number: 1 (lower is better)
Translates to: CVMVIVCQGGSEGQE*YQALGIHIGTGNCC
Trigger: ACAACAATTTCCTGTACCTATGTGGATTCCAAGAGCCTGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAAACAATTACCATCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 90 bp TTAGTTAATCTGGGACTCAAAGGACAATATACCTGGGTCAGGGACTaGAAATCACCAGAAGAATTCTACAACAGCCTTTCTGCCTACCAA +
Preference number: 1 (lower is better)
Translates to: LVNLGLKGQYTWVRD*KSPEEFYNSLSAYQ
Trigger: TTGGTAGGCAGAAAGGCTGTTGTAGAATTCTTCTGGTGATTTTCAGTCCCTGACCCAGGTATATTGTCCTTTGAGTCCCAGATTAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 90 bp CTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTaGAATCTAACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTAT +
Preference number: 1 (lower is better)
Translates to: LQQPFCLPITPIELD*NLTRSVFHVQVCCY
Trigger: ATAGCAGCATACTTGGACATGAAACACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 90 bp AATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTaGCTGGAATCTAACCAGAAGTGTGTTTCATGTCCAAGTATGCTG +
Preference number: 1 (lower is better)
Translates to: NSTTAFLPTNNTYRT*LESNQKCVSCPSML
Trigger: CAGCATACTTGGACATGAAACACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTGCACACGTGCAGGGCTaGCAGAAGACACCCATTTTG +
Preference number: 2 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGIAHVQG*QKTPIL
Trigger: CAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGC...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTGTGAAGCTGTGCATGTaGGGGCCTCATCCAGTCATA +
Preference number: 2 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGIVKLCM*GPHPVI
Trigger: TATGACTGGATGAGGCCCTCACATGCACAGCTTCAC...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCAGGCGGAACCGCTGTaGCCAGCCCTGATGTCTGGA +
Preference number: 2 (lower is better)
Translates to: PESPLHHPQFVHQDPETSQAEPL*PALMSG
Trigger: TCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTG...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAACTGGACCTCCCAAAGTaGTGGGATTACAGGCGGAAC +
Preference number: 2 (lower is better)
Translates to: QHHAVDVLQACPREAEGQLDLPK*WDYRRN
Trigger: GTTCCGCCTGTAATCCCAGCACTTTGGGAGGTCCAG...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAACTATTGCTCCATCAGTaGCAGATCGCGGACCATCCC +
Preference number: 2 (lower is better)
Translates to: QHHAVDVLQACPREAEGQLLLHQ*QIADHP
Trigger: GGGATGGTCCGCGATCTGGCACTGATGGAGCAATAG...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTACAGAAGGTATGTATTaGCCGCCCACAATCACCGAA +
Preference number: 2 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGITEGMY*PPTITE
Trigger: TTCGGTGATTGTGGGCGGCCAATACATACCTTCTGT...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAAAGCACAACCACTGTCTaGTCTGTCCCACTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: QHHAVDVLQACPREAEGQSTTTV*SVPLCP
Trigger: AGGGCAGAGTGGGACAGACCAGACAGTGGTTGTGCT...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCATCACCCAGGCTGGAGTaGAGTCGCATGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGASPRLE*SRMSSA
Trigger: AGCTGAGCTCATGCGACTGCACTCCAGCCTGGGTGA...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAATGGAGTGCAGTCGCATaGGCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: REELQKVCIGRPQSPKDEWSAVA*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATGCGACTGCACTCCA...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CCA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTAGAACCTGCCATTGACTaGCCACGTACGTGTGATGTC +
Preference number: 2 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVEPAID*PRTCDV
Trigger: GACATCACACGTACGTGGCCAGTCAATGGCAGGTTC...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp TGTGATGTCACTCACATAGCAGGAAGACTCACAACCTCCATCCAGAAGCACCATTTTCTGCAGGAGACTTaGTCAGCCGGAGGCGCTGTA +
Preference number: 2 (lower is better)
Translates to: CDVTHIAGRLTTSIQKHHFLQET*SAGGAV
Trigger: TACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAA...ATGGTGCTTCTGGATGGAGGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACTGGCCACGTACGTGTaGTGTCACTCACATAGCAGG +
Preference number: 2 (lower is better)
Translates to: REELQKVCIGRPQSPKDELATYV*CHSHSR
Trigger: CCTGCTATGTGAGTGACATCACACGTACGTGGCCAG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCAGGCGGAACCGCTGTaGCCAGCCCTGATGTCTGGA +
Preference number: 2 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRQAEPL*PALMSG
Trigger: TCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGAAAAATAGCCGGGTGTaGTGGCAGGCGCCTGTATTC +
Preference number: 2 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQKNSRV*WQAPVF
Trigger: GAATACAGGCGCCTGCCACCACACCCGGCTATTTTT...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTGGACACCAGTGCCCCTaGGGGCTCATATGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFGHQCP*GLIWLQ
Trigger: CTGGAGCCATATGAGCCCTCAGGGGCACTGGTGTCC...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGCTGAGATTACGCCACTaGACTCCATCCAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: YGSSRYAGSRIGREELQKLRLRH*TPSSPG
Trigger: GCCTGGGCTGGATGGAGTGCAGTGGCGTAATCTCAG...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGCTGGAACCTGGACTGTaGCTGACTAGTAAGACTGCA +
Preference number: 2 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKLEPGL*LTSKTA
Trigger: TGCAGTCTTACTAGTCAGCCACAGTCCAGGTTCCAG...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTGGAACGGGGCATGTCTaGAGTGTCATGGACATCCAT +
Preference number: 2 (lower is better)
Translates to: PESPLHHPQFVHQDPETSGTGHV*SVMDIH
Trigger: ATGGATGTCCATGACACTCCAGACATGCCCCGTTCC...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CAA 90 bp GAAATTCTTCTAGCGTATAGGCTTCGTCTACTCCAGTTAGAGCTATaGCTCCATCAGTGCCAGATCGCGGACCATCCCAAAGTTCTCGAC +
Preference number: 2 (lower is better)
Translates to: EILLAYRLRLLQLEL*LHQCQIADHPKVLD
Trigger: GTCGAGAACTTTGGGATGGTCCGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATACGCTAGAAGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CAA 90 bp TCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTaGTCCCAGGGAAGCAGAGGGCCAAACAATCTCTTTGGATCTCTA +
Preference number: 2 (lower is better)
Translates to: SVLSGSASCCRCSPS*SQGSRGPNNLFGSL
Trigger: TAGAGATCCAAAGAGATTGTTTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGACACCAGTGCCCCTaGGGGCTCATATGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNGHQCP*GLIWLQ
Trigger: CTGGAGCCATATGAGCCCTCAGGGGCACTGGTGTCC...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR TCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAAATCTCCTGACCTCGTaGTCCGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLANLLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAACAGGGGTACTTCTCTaGAAACTGGGCGCTACTACT +
Preference number: 2 (lower is better)
Translates to: REELQKVCIGRPQSPKDETGVLL*KLGATT
Trigger: AGTAGTAGCGCCCAGTTTTCAGAGAAGTACCCCTGT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGTCCCACTCTGCCCTTaGGCTTCCTTCTGGATCAGA +
Preference number: 2 (lower is better)
Translates to: YGSSRYAGSRIGREELQKVPLCP*ASFWIR
Trigger: TCTGATCCAGAAGGAAGCTCAAGGGCAGAGTGGGAC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGTCACCCAGGCTGGAGTaGAGTGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWSPRLE*SGAILA
Trigger: AGCCAAGATCGCGCCACTGCACTCCAGCCTGGGTGA...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTCCCGAACCTTGTTCTTaGTCTTGGCTTTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: RSEGQEAWLHICSMSFISPEPCS*SWLWPQ
Trigger: CTGAGGCCAAAGCCAAGAGCAAGAACAAGGTTCGGG...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGTTTGGGAGGCTGAGGTaGGCGGATTGCCGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWFGRLR*ADCRSS
Trigger: TGAGCTCCGGCAATCCGCCCACCTCAGCCTCCCAAA...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGTCTTGCTCTTGGCTTTaGCCTCAGTCAGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: YGSSRYAGSRIGREELQKSCSWL*PQSGAA
Trigger: TGCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGA...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGTGGCCAGGCTGGTCTTaGCCTCCTGGTCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWWPGWS*PPGLKR
Trigger: TCTCTTGAGACCAGGAGGTCAAGACCAGCCTGGCCA...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACC +
Preference number: 2 (lower is better)
Translates to: PESPLHHPQFVHQDPETSSAYST*DSPGVT
Trigger: GGTAACTCCAGGACTATCTCAGGTGGAATATGCACT...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp ATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAAAAAGTAATACATTCACACAGCTaGTATGCTCCCAAATGGAAT +
Preference number: 2 (lower is better)
Translates to: IADHPKVLDWDLAEAQKVIHSHS*YAPKWN
Trigger: ATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTAT...TACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGGAGGTCTCAATCTCCTaGCCTCGTGATCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWEVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAGGAGATTGAGACCTC...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGATTTTGAACCTGAGGTaGATGTGGGCCGCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: YGSSRYAGSRIGREELQKILNLR*MWAAVK
Trigger: CTTCACTGCGGCCCACATGCACCTCAGGTTCAAAAT...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR GCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTATGAGCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFMSSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGCTCAT...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTCACCCAGGCTGGAGTaGAGTCGCATGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNSPRLE*SRMSSA
Trigger: AGCTGAGCTCATGCGACTGCACTCCAGCCTGGGTGA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGAATAGCCGGGTGTGGTaGCAGGCGCCTGTATTCCTA +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWNSRVW*QAPVFL
Trigger: TAGGAATACAGGCGCCTGCCACCACACCCGGCTATT...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATCTGGACCTCCCAAAGTaGTGGGATTACAGGCGGAAC +
Preference number: 2 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNLDLPK*WDYRRN
Trigger: GTTCCGCCTGTAATCCCAGCACTTTGGGAGGTCCAG...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR GCA 90 bp TATAGGCTTCGTCTACTCCAGTTAGAGCTATTGCTCCATCAGTGCCAGATCGCGACATTAGTTTGTGTCTaGGAAGTGCATATTCCACCT +
Preference number: 2 (lower is better)
Translates to: YRLRLLQLELLLHQCQIATLVCV*EVHIPP
Trigger: AGGTGGAATATGCACTTCGCAGACACAAACTAATGT...CGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAGTTAACTGGAATGCATaGACATGTGTAACCAAGACC +
Preference number: 2 (lower is better)
Translates to: REELQKVCIGRPQSPKDEVNWNA*TCVTKT
Trigger: GGTCTTGGTTACACATGTCCATGCATTCCAGTTAAC...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAGTGACCATCCCTCCTTaGTCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAVTIPP*SPKVLG
Trigger: TCCCAGCACTTTGGGAGACCAAGGAGGGATGGTCAC...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGGCAGGAGAATTGCCTaGACCCAGGTGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGGRRIA*TQVVEV
Trigger: AACCTCCACCACCTGGGTTCAGGCAATTCTCCTGCC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATGCACACGTGCAGGGCTaGCAGAAGACACCCATTTTG +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYAHVQG*QKTPIL
Trigger: CAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGC...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATCTCAGAAAGCACACGTaGAGGGCTGCCAGAAGACAC +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYLRKHT*RAARRH
Trigger: GTGTCTTCTGGCAGCCCTGCACGTGTGCTTTCTGAG...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR GCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTTTCACACAGCTGCTATaGTCCCAAATGGAATGCATA +
Preference number: 2 (lower is better)
Translates to: RSEGQEAWLHICSMSFISFTQLL*SQMECI
Trigger: TATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAA...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCACTGAGGCAGGAGAACTaGTTGAACCAGGGAGTTGGA +
Preference number: 2 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLALRQEN*LNQGVG
Trigger: TCCAACTCCCTGGTTCAAGCAGTTCTCCTGCCTCAG...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CAA 90 bp TCTTCTCCATCTCTGACATGGGAACAGGAGGGGGAGAAGCAGCATTaGTGCTTCACATTTCTGATCTCTGTATTATTAACAAAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: SSPSLTWEQEGEKQH*CFTFLISVLLTKLN
Trigger: GTTCAGCTTTGTTAATAATACAGAGATCAGAAATGTGAAGCACAAATGCTGCTTCTCCCCCTCCTGTTCCCATGTCAGAGATGGAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTCACACAAACTTCTTATaGTATTGGGTTGATCTCAGC +
Preference number: 2 (lower is better)
Translates to: RSEGQEAWLHICSMSFISHTNFL*YWVDLS
Trigger: GCTGAGATCAACCCAATATCATAAGAAGTTTGTGTG...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATGGCTTCATAGAGTTCTaGCTGAGGTGCGGTGAACCT +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYGFIEF*LRCGEP
Trigger: AGGTTCACCGCACCTCAGGCAGAACTCTATGAAGCC...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGCCCTGATGTCTaGATCTTTAGTATATACATA +
Preference number: 2 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACPSPDV*IFSIYI
Trigger: TATGTATATACTAAAGATCCAGACATCAGGGCTGGG...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGATTGAAGAGAAAAGATaGCAGGATGTCAGGATTTTA +
Preference number: 2 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQIEEKR*QDVRIL
Trigger: TAAAATCCTGACATCCTGCCATCTTTTCTCTTCAAT...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTGCAAGCTCTGCCTTCTaGGTTCACGCCATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LPLEVYELAKAVENYGKSASSAF*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGAAGGCAGAGCTTGC...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAAACCTGGACTGTGGCTaGCTAGTAAGACTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGNLDCG*LVRLQD
Trigger: GTCCTGCAGTCTTACTAGTCAGCCACAGTCCAGGTT...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGACATTATCTGTCTCTTaGGGAAGTCACTGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWTLSVS*GSHCLS
Trigger: AGACAGGCAGTGACTTCCTCAAGAGACAGATAATGT...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTAGCTTTGAAAAACTCTaGTTTCTTGTGGGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: RSEGQEAWLHICSMSFISSFEKL*FLVGFS
Trigger: ACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCT...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGAGCAGCCAGAGCTGTaGAGTTATTTCCCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGEQPEL*SYFPPL
Trigger: AAGGGGAGGGAAATAACTCCACAGCTCTGGCTGCTC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGTTGCCAGGGAGGCTCTaGAGGACAAGAATGCTATCA +
Preference number: 2 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMLPGRL*RTRMLS
Trigger: TGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAA...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR TCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATATAGTGCAAAGTGTTTaGCCGATTACCACCAGCCAC +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYIVQSV*PITTSH
Trigger: GTGGCTGGTGGTAATCGGTCAAACACTTTGCACTAT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTATTTTGAACCTGAGGTaGATGTGGGCCGCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: LPLEVYELAKAVENYGKSILNLR*MWAAVK
Trigger: CTTCACTGCGGCCCACATGCACCTCAGGTTCAAAAT...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGTTCAAGCAATTCTCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWFKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAA...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCACTCCATTCTGAGAGCTaGTTAGATAAGGTGCGCAAA +
Preference number: 2 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLALHSES*LDKVRK
Trigger: TTTGCGCACCTTATCTAAGCAGCTCTCAGAATGGAG...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCCCAGCCCTGATGTCTaGATCTTTAGTATATACATA +
Preference number: 2 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRPSPDV*IFSIYI
Trigger: TATGTATATACTAAAGATCCAGACATCAGGGCTGGG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTCACACAAACTTCTTATaGTATTGGGTTGATCTCAGC +
Preference number: 2 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFHTNFL*YWVDLS
Trigger: GCTGAGATCAACCCAATATCATAAGAAGTTTGTGTG...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAATACATTCACACAGCTaGTATGCTCCCAAATGGAAT +
Preference number: 2 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKIHSHS*YAPKWN
Trigger: ATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTAT...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGGGGAGCAGGGATATCTaGGAAAGAAATCTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: RILQQPFCLPITPIELDWGSRDI*ERNLSF
Trigger: AAAAGAAAGATTTCTTTCGCAGATATCCCTGCTCCC...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGGTGATGGTAATTGTTTaGCAGGGAGGCTCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMVMVIV*QGGSEG
Trigger: TCCTTCAGAGCCTCCCTGGCAAACAATTACCATCAC...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGACAGAAGGTATGTATTaGCCGCCCACAATCACCGAA +
Preference number: 2 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMTEGMY*PPTITE
Trigger: TTCGGTGATTGTGGGCGGCCAATACATACCTTCTGT...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATATGCTATCAGGCTCTTaGAATCCACATAGGTACAGG +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYMLSGS*NPHRYR
Trigger: CCTGTACCTATGTGGATTCCAAGAGCCTGATAGCAT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATGTTAACTGGAATGCATaGACATGTGTAACCAAGACC +
Preference number: 2 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYVNWNA*TCVTKT
Trigger: GGTCTTGGTTACACATGTCCATGCATTCCAGTTAAC...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGATACAAAAATTGGGTGTaGTGGCAGGTGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGYKNWV*WQVPVI
Trigger: GATTACAGGCACCTGCCACCACACCCAATTTTTGTA...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR TCA 90 bp AAGCACCATTTCCCCATCCTTGATGAGTTGATTATTTTTCACATAGTGCAAAGTCTCCCCTTACAGCTTTaGAAAACTCTGATTTCTTGT +
Preference number: 2 (lower is better)
Translates to: KHHFPILDELIIFHIVQSLPLQL*KTLISC
Trigger: ACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAG...ACTTTGCACTATGTGAAAAATAATCAACTCATCAAGGATGGGGAAATGGTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR GCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTTCACACAGCTGCTATaGTCCCAAATGGAATGCATA +
Preference number: 2 (lower is better)
Translates to: LPLEVYELAKAVENYGKSFTQLL*SQMECI
Trigger: TATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTCCTATAGAACTTGACTaGAATCTAACCAGAAGTGTG +
Preference number: 2 (lower is better)
Translates to: LPLEVYELAKAVENYGKSPIELD*NLTRSV
Trigger: CACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGG...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCTACAGAAGGTATGTATaGGCCGCCCACAATCACCGA +
Preference number: 3 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIYRRYV*AAHNHR
Trigger: TCGGTGATTGTGGGCGGCCAATACATACCTTCTGTA...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp GGAGACTTGATCAGCCGGAGGCGCTGTATCAGCTGCTaGACACCCCGAACCTTGTTCTTGCTCTTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GDLISRRRCISC*TPRTLFLLLAL
Trigger: CAAAGCCAAGAGCAAGAACAAGGTTCGGGGTGTTCAGCAGCTGATACAGCGCCTCCGGCTGATCAAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 72 bp TGGGAAGGTGGGTATGGGGGATGGAGACTCCAGCTGTaGAGCCTCCATTCTGAGAGCTGCTTAGATAAGGTG +
Preference number: 3 (lower is better)
Translates to: WEGGYGGWRLQL*SLHSESCLDKV
Trigger: CACCTTATCTAAGCAGCTCTCAGAATGGAGGCTGCACAGCTGGAGTCTCCATCCCCCATACCCACCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 72 bp CAGTGCCAGATCGCGGACCATCCCAAAGTTCTCGACTaGGATCTCGCCGAGGCACAAAAAGTATGGCTTTGT +
Preference number: 3 (lower is better)
Translates to: QCQIADHPKVLD*DLAEAQKVWLC
Trigger: ACAAAGCCATACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 72 bp TGCCAGAAGACACCCATTTTGAACCTGAGGTGCATGTaGGCCGCAGTGAAGGTCAAGAAGCCTGGCTGCATA +
Preference number: 3 (lower is better)
Translates to: CQKTPILNLRCM*AAVKVKKPGCI
Trigger: TATGCAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGAGTGACCATCCCTCCTaGGTCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQSDHPS*VSQSAG
Trigger: CCCAGCACTTTGGGAGACCAAGGAGGGATGGTCACT...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR GCA 72 bp ACACACAGAGACACTCAGAAAGCACACGTGCAGGGCTaGCAGAAGACACCCATTTTGAACCTGAGGTGCATG +
Preference number: 3 (lower is better)
Translates to: THRDTQKAHVQG*QKTPILNLRCM
Trigger: CATGCACCTCAGGTTCAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGCTTTCTGAGTGTCTCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR GCA 72 bp CTTCGTCTACTCCAGTTAGAGCTATTGCTCCATCAGTaGCAGATCGCGGACCATCCCAAAGTTCTCGACTGG +
Preference number: 3 (lower is better)
Translates to: LRLLQLELLLHQ*QIADHPKVLDW
Trigger: CCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CCA 72 bp GCTGAACACCCCGAACCTTGTTCTTGCTCTTGGCTTTaGCCTCAGTCAGGGGCTGCATATAGTCAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: AEHPEPCSCSWL*PQSGAAYSQSE
Trigger: TTCACTCTGACTATATGCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGAACAAGGTTCGGGGTGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTAAAAACTCTGATTTCTaGTGGGTTTCAGTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGIKNSDF*WVSVVS
Trigger: GCTCACCACTGAAACCCACAAGAAATCAGAGTTTTT...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTGCGGTGAACCTGCCATaGACTGGCCACGTACGTGTG +
Preference number: 3 (lower is better)
Translates to: RSEGQEAWLHICSMSFISAVNLP*TGHVRV
Trigger: CACACGTACGTGGCCAGTCAATGGCAGGTTCACCGC...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTATCAGAGACATTAGTTaGTGTCTGCGAAGTGCATAT +
Preference number: 3 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGIIRDIS*CLRSAY
Trigger: ATATGCACTTCGCAGACACAAACTAATGTCTCTGAT...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp CAGGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTaGGGGCCTCATCCAGTCATACCAAACCATGTTCGT +
Preference number: 3 (lower is better)
Translates to: QGLHIVRVKLCM*GPHPVIPNHVR
Trigger: ACGAACATGGTTTGGTATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp CAGCAATCTGCATTCGTTCAATTTCTGCAGGAGACTTaGTCAGCCGGAGGCGCTGTATCAGCTGCTGAACAC +
Preference number: 3 (lower is better)
Translates to: QQSAFVQFLQET*SAGGAVSAAEH
Trigger: GTGTTCAGCAGCTGATACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAATTGAACGAATGCAGATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCACCGGAGCTCAGGAGTTaGAGACCGGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAPELRS*RPAWAT
Trigger: TGTTGCCCAGGCCGGTCTCAAACTCCTGAGCTCCGG...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp TGTGATGTCACTCACATAGCAGGAAGACTCACAACCTCCATCCAGAAGCACCATCTCCAGTTAGAGCTATaGCTCCATCAGTGCCAGATC +
Preference number: 3 (lower is better)
Translates to: CDVTHIAGRLTTSIQKHHLQLEL*LHQCQI
Trigger: GATCTGGCACTGATGGAGCAATAGCTCTAACTGGAG...ATGGTGCTTCTGGATGGAGGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTACCTTGTTCTTGCTCTaGGCTTTGGCCTCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: RSEGQEAWLHICSMSFISTLFLL*ALASVR
Trigger: CCTGACTGAGGCCAAAGCCAAGAGCAAGAACAAGGT...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp ATTGACTGGCCACGTACGTGTGATGTCACTCACATAGCAGGAAGACTCACAACCCATAGTGCAAAGTGTTaGACCGATTACCACCAGCCA +
Preference number: 3 (lower is better)
Translates to: IDWPRTCDVTHIAGRLTTHSAKC*TDYHQP
Trigger: TGGCTGGTGGTAATCGGTCAAACACTTTGCACTATG...GGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACACGTACGTGGCCAGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp TTGGGACAGTCTGCAGAAAGGATGAGAGGTGAGTCCTaGGTCACCACTACATCATCCTCAATTCGTACACCA +
Preference number: 3 (lower is better)
Translates to: LGQSAERMRGES*VTTTSSSIRTP
Trigger: TGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCTGCAGACTGTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp CATCTCTTTGGGACAGTCTGCAGAAAGGATGAGAGGTaGGTCCTGAGTCACCACTACATCATCCTCAATTCG +
Preference number: 3 (lower is better)
Translates to: HLFGTVCRKDER*VLSHHYIILNS
Trigger: CGAATTGAGGATGATGTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCTGCAGACTGTCCCAAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGTACAGAAGGTATGTATaGGCCGCCCACAATCACCGA +
Preference number: 3 (lower is better)
Translates to: YGSSRYAGSRIGREELQKYRRYV*AAHNHR
Trigger: TCGGTGATTGTGGGCGGCCAATACATACCTTCTGTA...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTTCTTGCTCTTGGCTTaGGCCTCAGTCAGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNFLLLA*ASVRGC
Trigger: GCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGAA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp AGAGGAAATCACAGAATGATAACAGGGGTACTTCTCTaGAAACTGGGCGCTACTACTGTGACTCTGACAGGG +
Preference number: 3 (lower is better)
Translates to: RGNHRMITGVLL*KLGATTVTLTG
Trigger: CCCTGTCAGAGTCACAGTAGTAGCGCCCAGTTTTCAGAGAAGTACCCCTGTTATCATTCTGTGATTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 72 bp GCTTTGTGTGATGGTAATTGTTTGCCAGGGAGGCTCTaGAGGACAAGAATGCTATCAGGCTCTTGGAATCCA +
Preference number: 3 (lower is better)
Translates to: ALCDGNCLPGRL*RTRMLSGSWNP
Trigger: TGGATTCCAAGAGCCTGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAAACAATTACCATCACACAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 72 bp GAGCTTCCTTCTGGATCAGAGACATTAGTTTGTGTCTaGGAAGTGCATATTCCACCTGAGATAGTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: ELPSGSETLVCV*EVHIPPEIVLE
Trigger: CTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTCTCTGATCCAGAAGGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 72 bp GTAATTGTTTGCCAGGGAGGCTCTGAAGGACAAGAATaGTATCAGGCTCTTGGAATCCACATAGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: VIVCQGGSEGQE*YQALGIHIGTG
Trigger: TCCTGTACCTATGTGGATTCCAAGAGCCTGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAAACAATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACCTCCCCTTACAGCTTaGAAAAACTCTGATTTCTTG +
Preference number: 3 (lower is better)
Translates to: REELQKVCIGRPQSPKDEPPLTA*KNSDFL
Trigger: CAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTACCCATCCTTGATGAGTaGATTATTTTTCACATAGTG +
Preference number: 3 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVPILDE*IIFHIV
Trigger: CACTATGTGAAAAATAATCAACTCATCAAGGATGGG...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp CCTGGAGTTACCTCCCCTTACAGCTTTGAAAAACTCTaGTTTCTTGTGGGTTTCAGTGGTGAGCTGCATTTC +
Preference number: 3 (lower is better)
Translates to: PGVTSPYSFEKL*FLVGFSGELHF
Trigger: GAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGGTAACTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp GACATTAGTTTGTGTCTGCGAAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACCTCCCCTTACAGCTTT +
Preference number: 3 (lower is better)
Translates to: DISLCLRSAYST*DSPGVTSPYSF
Trigger: AAAGCTGTAAGGGGAGGTAACTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 72 bp TCTATGAAAGCCTGTGATGTCAGCTTCCCAGCAATCTaGATTCGTTCAATTTCTGCAGGAGACTTGATCAGC +
Preference number: 3 (lower is better)
Translates to: SMKACDVSFPAI*IRSISAGDLIS
Trigger: GCTGATCAAGTCTCCTGCAGAAATTGAACGAATGCAGATTGCTGGGAAGCTGACATCACAGGCTTTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATATTTCTGCAGGAGACTaGATCAGCCGGAGGCGCTGT +
Preference number: 3 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYISAGD*ISRRRC
Trigger: ACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAAT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR-3UTR CAA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCATATTTTCGAGCAGCCTaGAAGGCATTATTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGAYFRAA*KALFSL
Trigger: TAAGGAAAATAATGCCTTCAAGGCTGCTCGAAAATA...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR TCA 72 bp TCCTCTGATTCAAACAATAATGATGCTCAAACTCAGTaGCACACAGGTAGAGAACAGCAGCACAACCAGGAG +
Preference number: 3 (lower is better)
Translates to: SSDSNNNDAQTQ*HTGREQQHNQE
Trigger: CTCCTGGTTGTGCTGCTGTTCTCTACCTGTGTGTCACTGAGTTTGAGCATCATTATTGTTTGAATCAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATCAGAAGACACCCATTTaGAACCTGAGGTGCATGTGG +
Preference number: 3 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNQKTPI*NLRCMW
Trigger: CCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTG...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR-3UTR CAA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCACAAGGTCTCTCTATGTaGCCTAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAQGLSM*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAACATAGAGAGACCTTG...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCACACATTATCTGTCTCTaGAGGAAGTCACTGCCTGTC +
Preference number: 3 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAHIICL*RKSLPV
Trigger: GACAGGCAGTGACTTCCTCAAGAGACAGATAATGTG...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 72 bp ACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTaGCTGGAATCTAACCAGAAGTGTGTTTCATGTCCA +
Preference number: 3 (lower is better)
Translates to: TAFLPTNNTYRT*LESNQKCVSCP
Trigger: TGGACATGAAACACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 72 bp TCTTCTAAGCAGGTTCCTTTATGTTGCTACTGTCTGTaGTGCCTGCCTAATTTTCTAATAGACACACAAACG +
Preference number: 3 (lower is better)
Translates to: SSKQVPLCCYCL*CLPNFLIDTQT
Trigger: CGTTTGTGTGTCTATTAGAAAATTAGGCAGGCACCACAGACAGTAGCAACATAAAGGAACCTGCTTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGCAGAAGACACCCATTTaGAACCTGAGGTGCATGTGG +
Preference number: 3 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMQKTPI*NLRCMW
Trigger: CCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTG...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
3UTR GCA 72 bp TGGAATCTAACCAGAAGTGTGTTTCATGTCCAAGTATaGTGCTATACATACAAGCTACCTAGGCTTTTAGCT +
Preference number: 3 (lower is better)
Translates to: WNLTRSVFHVQV*CYTYKLPRLLA
Trigger: AGCTAAAAGCCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGTTAGATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR GCA 72 bp TCTAAGCAGGTTCCTTTATGTTGCTACTGTCTGTGGTaGCTGCCTAATTTTCTAATAGACACACAAACGAAT +
Preference number: 3 (lower is better)
Translates to: SKQVPLCCYCLW*LPNFLIDTQTN
Trigger: ATTCGTTTGTGTGTCTATTAGAAAATTAGGCAGGCACCACAGACAGTAGCAACATAAAGGAACCTGCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CCA 72 bp CCTTTCTGCCTACCAATAACACCTATAGAACTTGACTaGAATCTAACCAGAAGTGTGTTTCATGTCCAAGTA +
Preference number: 3 (lower is better)
Translates to: PFCLPITPIELD*NLTRSVFHVQV
Trigger: TACTTGGACATGAAACACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATCATAGGTACAGGAAATaGTTGTCTTGGTGGAAAGTA +
Preference number: 3 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNHRYRK*LSWWKV
Trigger: TACTTTCCACCAAGACAACAATTTCCTGTACCTATG...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR GCA 72 bp AATCTAACCAGAAGTGTGTTTCATGTCCAAGTATGCTaGTATACATACAAGCTACCTAGGCTTTTAGCTAGA +
Preference number: 3 (lower is better)
Translates to: NLTRSVFHVQVC*YTYKLPRLLAR
Trigger: TCTAGCTAAAAGCCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGTTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR GCA 72 bp CTGAAAATCACCAGAAGAATTCTACAACAGCCTTTCTaGCTACCAATAACACCTATAGAACTTGACTGGAAT +
Preference number: 3 (lower is better)
Translates to: LKITRRILQQPF*LPITPIELDWN
Trigger: ATTCCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCTTCTGGTGATTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR TCA 72 bp TATTTGTATCTTAATCTCAAGACAGTATTTCTACGGTaGAGGTTTTTCCCTTTCTCACCTTACAAAAACGGA +
Preference number: 3 (lower is better)
Translates to: YLYLNLKTVFLR*RFFPFSPYKNG
Trigger: TCCGTTTTTGTAAGGTGAGAAAGGGAAAAACCTTCACCGTAGAAATACTGTCTTGAGATTAAGATACAAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp GTGCCAGATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACATGGCCAGGCTGGTCTTaGCCTCCTGGTCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VPDRGPSQSSRLGSRRGTWPGWS*PPGLKR
Trigger: TCTCTTGAGACCAGGAGGTCAAGACCAGCCTGGCCA...TGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp GTGCCAGATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAGTCCCACTCTGCCCTTaGGCTTCCTTCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: VPDRGPSQSSRLGSRRGTVPLCP*ASFWIR
Trigger: TCTGATCCAGAAGGAAGCTCAAGGGCAGAGTGGGAC...TGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCCTGGCCACGTACGTGTaGTGTCACTCACATAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGCRGRERGMSGVSWTSILATYV*CHSHSR
Trigger: CCTGCTATGTGAGTGACATCACACGTACGTGGCCAG...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCCCCGAACCTTGTTCTTaGTCTTGGCTTTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIPEPCS*SWLWPQ
Trigger: CTGAGGCCAAAGCCAAGAGCAAGAACAAGGTTCGGG...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp ATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAAAAAGTACAGGCGGAACCGCTGTaGCCAGCCCTGATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IADHPKVLDWDLAEAQKVQAEPL*PALMSG
Trigger: TCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTG...TACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTACAGCGGGAACCAGCTTaGGGGCTGAGAGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVQREPA*GLRAAK
Trigger: CTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTG...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGGGACACCAGTGCCCCTaGGGGCTCATATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQGHQCP*GLIWLQ
Trigger: CTGGAGCCATATGAGCCCTCAGGGGCACTGGTGTCC...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAATGGAGTGCAGTCGCATaGGCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: QHHAVDVLQACPREAEGQWSAVA*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATGCGACTGCACTCCA...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAACGCTGTATCAGCTGCTaGACACCCCGAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QHHAVDVLQACPREAEGQRCISC*TPRTLF
Trigger: GAACAAGGTTCGGGGTGTTCAGCAGCTGATACAGCG...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp GGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATAGCACAACCACTGTCTaGTCTGTCCCACTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GAAYSQSEAVHVRASSSHSTTTV*SVPLCP
Trigger: AGGGCAGAGTGGGACAGACCAGACAGTGGTTGTGCT...ATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCGTCAAGAAGCCTGGCTaGATATCTGTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIVKKPG*ISVQCH
Trigger: ATGACATTGAACAGATATGCAGCCAGGCTTCTTGAC...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp TATAGGCTTCGTCTACTCCAGTTAGAGCTATTGCTCCATCAGTGCCAGATCGCGTCACCCAGGCTGGAGTaGAGTCGCATGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YRLRLLQLELLLHQCQIASPRLE*SRMSSA
Trigger: AGCTGAGCTCATGCGACTGCACTCCAGCCTGGGTGA...CGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGCCGGTGGGTGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKPVGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCACCCACCGG...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTATCTTGCTCTTGGCTTTaGCCTCAGTCAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVSCSWL*PQSGAA
Trigger: TGCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGA...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCGTTAACTGGAATGCATaGACATGTGTAACCAAGACC +
Preference number: 4 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIVNWNA*TCVTKT
Trigger: GGTCTTGGTTACACATGTCCATGCATTCCAGTTAAC...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TGTGATGTCACTCACATAGCAGGAAGACTCACAACCTCCATCCAGAAGCACCATAACCAGCTTGGGGGCTaGGAGCAGCCAAGGCATTAC +
Preference number: 4 (lower is better)
Translates to: CDVTHIAGRLTTSIQKHHNQLGG*EQPRHY
Trigger: GTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTT...ATGGTGCTTCTGGATGGAGGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TATAGGCTTCGTCTACTCCAGTTAGAGCTATTGCTCCATCAGTGCCAGATCGCGTGCCGGGCTCAATTGTaGTTACCATCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YRLRLLQLELLLHQCQIACRAQL*LPSQAA
Trigger: TGCAGCCTGGGATGGTAATCACAATTGAGCCCGGCA...CGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGGACACCAGTGCCCCTaGGGGCTCATATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKGHQCP*GLIWLQ
Trigger: CTGGAGCCATATGAGCCCTCAGGGGCACTGGTGTCC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAACTCCTGGGCTCAAGTaGCCATCCCTCCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDETPGLK*PSLLGL
Trigger: GAGACCAAGGAGGGATGGTCACTTGAGCCCAGGAGT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp GTGCCAGATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACACTCCCCTTACAGCTTTaGAAAACTCTGATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VPDRGPSQSSRLGSRRGTLPLQL*KTLISC
Trigger: ACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAG...TGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGATCTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp GGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATATTTTGAACCTGAGGTaGATGTGGGCCGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GAAYSQSEAVHVRASSSHILNLR*MWAAVK
Trigger: CTTCACTGCGGCCCACATGCACCTCAGGTTCAAAAT...ATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGGCACACGTGCAGGGCTaGCAGAAGACACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKAHVQG*QKTPIL
Trigger: CAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGC...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ATTGACTGGCCACGTACGTGTGATGTCACTCACATAGCAGGAAGACTCACAACCGCACACGTGCAGGGCTaGCAGAAGACACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: IDWPRTCDVTHIAGRLTTAHVQG*QKTPIL
Trigger: CAAAATGGGTGTCTTCTGGCAGCCCTGCACGTGTGC...GGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACACGTACGTGGCCAGTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCATACATTCACACAGCTaGTATGCTCCCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIIHSHS*YAPKWN
Trigger: ATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTAT...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGCAGGCGGAACCGCTGTaGCCAGCCCTGATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKQAEPL*PALMSG
Trigger: TCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTG...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ATTGACTGGCCACGTACGTGTGATGTCACTCACATAGCAGGAAGACTCACAACCATGAGCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IDWPRTCDVTHIAGRLTTMSSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGCTCAT...GGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACACGTACGTGGCCAGTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAATGGAGTTACCTCCCCTaGTCTGAGGAGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDEWSYLP*SEEVWV
Trigger: CACCCACACCTCCTCAGACCAGGGGAGGTAACTCCA...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCAAACCTGAGGTGCATGTaGGCCGCAGTGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGANLRCM*AAVKVK
Trigger: CTTGACCTTCACTGCGGCCCACATGCACCTCAGGTT...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGGCAAGCTCTGCCTTCTaGGTTCACGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQASSAF*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGAAGGCAGAGCTTGC...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACTCCGAGGTCACCGCTaGACTGGTGAACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDELRGHR*TGEQLT
Trigger: AGTGAGCTGTTCACCAGTCCAGCGGTGACCTCGGAG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGGTGAAGCTGTGCATGTaGGGGCCTCATCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQVKLCM*GPHPVI
Trigger: TATGACTGGATGAGGCCCTCACATGCACAGCTTCAC...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACTCTGTTGCCCAGGGTaGAGTGGCACAATCATGGCT +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDELCCPG*SGTIMA
Trigger: AGCCATGATTGTGCCACTTCACCCTGGGCAACAGAG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGCTGAGGCAGAAGAATTaGCTGAACCCGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQLRQKN*LNPGDG
Trigger: TCCATCTCCCGGGTTCAGGCAATTCTTCTGCCTCAG...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CAA 72 bp CTAGCGTATAGGCTTCGTCTACTCCAGTTAGAGCTATaGCTCCATCAGTGCCAGATCGCGGACCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: LAYRLRLLQLEL*LHQCQIADHPK
Trigger: TTTGGGATGGTCCGCGATCTGGCACTGATGGAGCAATAGCTCTAACTGGAGTAGACGAAGCCTATACGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGAGAAAGGATGAGAGGTaGGTCCTGAGTCACCACTAC +
Preference number: 4 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKRKDER*VLSHHY
Trigger: GTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCT...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAAACCTGGACTGTGGCTaGCTAGTAAGACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDENLDCG*LVRLQD
Trigger: GTCCTGCAGTCTTACTAGTCAGCCACAGTCCAGGTT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTAACCTGGACTGTGGCTaGCTAGTAAGACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PESPLHHPQFVHQDPETSNLDCG*LVRLQD
Trigger: GTCCTGCAGTCTTACTAGTCAGCCACAGTCCAGGTT...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGGCAGGAGAATTGCCTaGACCCAGGTGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKGRRIA*TQVVEV
Trigger: AACCTCCACCACCTGGGTTCAGGCAATTCTCCTGCC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAATTTCTTCTCCATCTCTaGCATGGGAACAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDEFLLHL*HGNRRG
Trigger: CCCCCTCCTGTTCCCATGTCAGAGATGGAGAAGAAA...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTGAGTTCTGCCTGAGGTaGGGTGAACCTGCCATTGAC +
Preference number: 4 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACEFCLR*GEPAID
Trigger: GTCAATGGCAGGTTCACCGCACCTCAGGCAGAACTC...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AATATCGTTGCTCATGTAGTATGTAGGGTTGGAGAGCACAACCACTGTCTGGTCCTGGACCTCCCAAAGTaGTGGGATTACAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: NIVAHVVCRVGEHNHCLVLDLPK*WDYRRN
Trigger: GTTCCGCCTGTAATCCCAGCACTTTGGGAGGTCCAG...GACCAGACAGTGGTTGTGCTCTCCAACCCTACATACTACATGAGCAACGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCATGGAATCCTCCTTTCTaGGACAGGCTGAAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGAWNPPF*DRLKGV
Trigger: TACTCCCTTCAGCCTGTCCCAGAAAGGAGGATTCCA...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTCCCAAAGTTCTCGACTaGGATCTCGCCGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: RSEGQEAWLHICSMSFISPKVLD*DLAEAQ
Trigger: TTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGG...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGGGTGGGTATGGGGGATaGAGACTCCAGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRGGYGG*RLQLCS
Trigger: GCTGCACAGCTGGAGTCTCCATCCCCCATACCCACC...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAATACAGGAGGTGCGGTaGCTCACGTCTGTAATCGCA +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDEIQEVR*LTSVIA
Trigger: TGCGATTACAGACGTGAGCCACCGCACCTCCTGTAT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CAA 72 bp TCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTaGTCCCAGGGAAGCAGAGGGCCAAACAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: SGSASCCRCSPS*SQGSRGPNNLF
Trigger: AAAGAGATTGTTTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGAACCAGCTTGGGGGCTaGGAGCAGCCAAGGCATTAC +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRNQLGG*EQPRHY
Trigger: GTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTT...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATAATCTCCTGACCTCGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNNLLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATT...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGAGTTGGAGGTTGCAGTaGGCCAAGATGGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKSWRLQ*AKMAPL
Trigger: TAGTGGCGCCATCTTGGCTCACTGCAACCTCCAACT...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGGATGCTCAAACTCAGTaGCACACAGGTAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKDAQTQ*HTGREQ
Trigger: CTGTTCTCTACCTGTGTGTCACTGAGTTTGAGCATC...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTGGCTTCATAGAGTTCTaGCTGAGGTGCGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACGFIEF*LRCGEP
Trigger: AGGTTCACCGCACCTCAGGCAGAACTCTATGAAGCC...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGTCAGGGTCAGCATCATaGTGTAGATGTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKSGSAS*CRCSPS
Trigger: GCTTGGAGAACATCTACAGCATGATGCTGACCCTGA...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCATCAGGGTCAGCATCATaGTGTAGATGTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGASGSAS*CRCSPS
Trigger: GCTTGGAGAACATCTACAGCATGATGCTGACCCTGA...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp AATATCGTTGCTCATGTAGTATGTAGGGTTGGAGAGCACAACCACTGTCTGGTCGAACCTGCCATTGACTaGCCACGTACGTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: NIVAHVVCRVGEHNHCLVEPAID*PRTCDV
Trigger: GACATCACACGTACGTGGCCAGTCAATGGCAGGTTC...GACCAGACAGTGGTTGTGCTCTCCAACCCTACATACTACATGAGCAACGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp ATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAAAAAGTAGCCAAACAATCTCTTTaGATCTCTAGAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IADHPKVLDWDLAEAQKVAKQSL*ISRTAS
Trigger: TGAAGCCGTTCTAGAGATCCAAAGAGATTGTTTGGC...TACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp CAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCCCAGGGAAGCAGAGGGCCAAATCTTTGTCATCCTCTaGAATATAAATGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QHHAVDVLQACPREAEGQIFVIL*NINAGL
Trigger: GAGCCCGGCATTTATATTCCAGAGGATGACAAAGAT...TTGGCCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCTACAGCATGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACTGGAACCTGGACTGTaGCTGACTAGTAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDELEPGL*LTSKTA
Trigger: TGCAGTCTTACTAGTCAGCCACAGTCCAGGTTCCAG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTTTTGGGAGGCTGAGGTaGGCGGATTGCCGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFFGRLR*ADCRSS
Trigger: TGAGCTCCGGCAATCCGCCCACCTCAGCCTCCCAAA...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGCAGGAATTCGAGTCTaGTCTGAGGAGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKAGIRV*SEEVWV
Trigger: CACCCACACCTCCTCAGACCAGACTCGAATTCCTGC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
3UTR CAA 72 bp GCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTTaGGGACAGTCTGCAGAAAGGATGAGAGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AWLHICSMSFIS*GQSAERMRGES
Trigger: GGACTCACCTCTCATCCTTTCTGCAGACTGTCCCAAAGAGATGAATGACATTGAACAGATATGCAGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGTGAAGCTGTGCATGTaGGGGCCTCATCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKVKLCM*GPHPVI
Trigger: TATGACTGGATGAGGCCCTCACATGCACAGCTTCAC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp AATATCGTTGCTCATGTAGTATGTAGGGTTGGAGAGCACAACCACTGTCTGGTCATGAGAGGTGAGTCCTaGGTCACCACTACATCATCC +
Preference number: 4 (lower is better)
Translates to: NIVAHVVCRVGEHNHCLVMRGES*VTTTSS
Trigger: GGATGATGTAGTGGTGACTCAGGACTCACCTCTCAT...GACCAGACAGTGGTTGTGCTCTCCAACCCTACATACTACATGAGCAACGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAGAGGTCTCAATCTCCTaGCCTCGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAEVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAGGAGATTGAGACCTC...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGAGGTGGGCAGATTATaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKEVGRL*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATAATCTGCCCACCTC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTAAGCTTCCCAGCAATCTaGATTCGTTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVSFPAI*IRSISA
Trigger: TGCAGAAATTGAACGAATGCAGATTGCTGGGAAGCT...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACAGGTTCCTTTATGTTaGTACTGTCTGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDEQVPLC*YCLWCL
Trigger: CAGGCACCACAGACAGTAGCAACATAAAGGAACCTG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGCAGCGGGAACCAGCTTaGGGGCTGAGAGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWQREPA*GLRAAK
Trigger: CTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTG...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGTTTGGGAGGCTGAGGTaGGCAGATTATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKFGRLR*ADYEVR
Trigger: CCTGACCTCATAATCTGCCCACCTCAGCCTCCCAAA...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTGTCCCACTCTGCCCTTaGGCTTCCTTCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFVPLCP*ASFWIR
Trigger: TCTGATCCAGAAGGAAGCTCAAGGGCAGAGTGGGAC...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAATTCTATGAAAGCCTGTaGTGTCAGCTTCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDEFYESL*CQLPSN
Trigger: ATTGCTGGGAAGCTGACATCACAGGCTTTCATAGAA...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGGCATGTGGGCCGCAGTaGAGGTCAAGAAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWACGPQ*RSRSLA
Trigger: AGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGC...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTGGAGTGCAGTCGCATaGGCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNWSAVA*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATGCGACTGCACTCCA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTAGCAGTTTGGGAAGCTaGGGTGGGTGGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFSSLGS*GGWITR
Trigger: CCTTGTGATCCACCCACCTCAGCTTCCCAAACTGCT...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGTCACCGCTGGACTGGTaGACAGCTCACTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWSPLDW*TAHCAF
Trigger: GAAAGCACAGTGAGCTGTTCACCAGTCCAGCGGTGA...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCATTCGTTCAATTTCTaGAGGAGACTTGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: PESPLHHPQFVHQDPETSHSFNF*RRLDQP
Trigger: CGGCTGATCAAGTCTCCTGCAGAAATTGAACGAATG...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGAGCTTCCCAGCAATCTaGATTCGTTCAATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQSFPAI*IRSISA
Trigger: TGCAGAAATTGAACGAATGCAGATTGCTGGGAAGCT...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTGAGTTCTGCCTGAGGTaGGGTGAACCTGCCATTGAC +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFEFCLR*GEPAID
Trigger: GTCAATGGCAGGTTCACCGCACCTCAGGCAGAACTC...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATATTACCATCCCAGGCTaGAGAGGGAGGGAACGGGGC +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYITIPG*RGRERG
Trigger: GCCCCGTTCCCTCCCTCTGCAGCCTGGGATGGTAAT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGCTCAGAAAGCACACGTaGAGGGCTGCCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWLRKHT*RAARRH
Trigger: GTGTCTTCTGGCAGCCCTGCACGTGTGCTTTCTGAG...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp AGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATACCAAACCATGTTCGTCTTTCACACAGCTGCTATaGTCCCAAATGGAATGCATA +
Preference number: 4 (lower is better)
Translates to: SEAVHVRASSSHTKPCSSFTQLL*SQMECI
Trigger: TATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAA...AGACGAACATGGTTTGGTATGACTGGATGAGGCCCTCACATGCACAGCTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTTTCAAGCAATTCTCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RSEGQEAWLHICSMSFISFKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAA...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAATGGAGACTCCAGCTGTaGAGCCTCCATTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKWRLQL*SLHSES
Trigger: GCTCTCAGAATGGAGGCTGCACAGCTGGAGTCTCCA...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCTGAGGCAGGAGAACTaGTTGAACCAGGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRLRQEN*LNQGVG
Trigger: TCCAACTCCCTGGTTCAAGCAGTTCTCCTGCCTCAG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTAGCACAACCACTGTCTaGTCTGTCCCACTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFSTTTV*SVPLCP
Trigger: AGGGCAGAGTGGGACAGACCAGACAGTGGTTGTGCT...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTGAAGGTCAAGAAGCCTaGCTGCATATCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: PESPLHHPQFVHQDPETSEGQEA*LHICSM
Trigger: CATTGAACAGATATGCAGCCAGGCTTCTTGACCTTC...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp CGCAGTGAAGGTCAAGAAGCCTGGCTGCATATCTGTTCAATGTCATTCATCTCTACAGAAGGTATGTATTaGCCGCCCACAATCACCGAA +
Preference number: 4 (lower is better)
Translates to: RSEGQEAWLHICSMSFISTEGMY*PPTITE
Trigger: TTCGGTGATTGTGGGCGGCCAATACATACCTTCTGT...AGAGATGAATGACATTGAACAGATATGCAGCCAGGCTTCTTGACCTTCACTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAAAGCAAGACTGTCTCTaGCTGGGGGCCGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAKQDCL*LGAVAH
Trigger: ATGAGCCACGGCCCCCAGCCAGAGACAGTCTTGCTT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTTTCTGCAGGAGACTTaGTCAGCCGGAGGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNFLQET*SAGGAV
Trigger: TACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATCTGGCCACGTACGTGTaGTGTCACTCACATAGCAGG +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNLATYV*CHSHSR
Trigger: CCTGCTATGTGAGTGACATCACACGTACGTGGCCAG...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGGCATGTGGGCCGCAGTaGAGGTCAAGAAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMACGPQ*RSRSLA
Trigger: AGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGC...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp TATTGGAAACACTGTTACAAAGGACTCCGAGGTCACCGCTGGACTGGTGAACAGTCCCTTGATGGGCAATaGCGTAACTATTTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: YWKHCYKGLRGHRWTGEQSLDGQ*RNYFQL
Trigger: TAACTGAAAATAGTTACGTCATTGCCCATCAAGGGA...CTGTTCACCAGTCCAGCGGTGACCTCGGAGTCCTTTGTAACAGTGTTTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGAGGCCGCGGACGTTTaGTACAGCGGGAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGEAADV*YSGNQL
Trigger: AAGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGGAGGCCGCGGACGTTTaGTACAGCGGGAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMEAADV*YSGNQL
Trigger: AAGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTC...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATCTATTGCTCCATCAGTaGCAGATCGCGGACCATCCC +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNLLLHQ*QIADHP
Trigger: GGGATGGTCCGCGATCTGGCACTGATGGAGCAATAG...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGATTACCATCCCAGGCTaGAGAGGGAGGGAACGGGGC +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMITIPG*RGRERG
Trigger: GCCCCGTTCCCTCCCTCTGCAGCCTGGGATGGTAAT...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGTCACCCAGGCTGGAGTaGAGTCGCATGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWSPRLE*SRMSSA
Trigger: AGCTGAGCTCATGCGACTGCACTCCAGCCTGGGTGA...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATCCGGGAGATGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYPGDGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCCATCTCCCGG...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCTGGAACCTGGACTGTaGCTGACTAGTAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRLEPGL*LTSKTA
Trigger: TGCAGTCTTACTAGTCAGCCACAGTCCAGGTTCCAG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGGAGCAGCCAGAGCTGTaGAGTTATTTCCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWEQPEL*SYFPPL
Trigger: AAGGGGAGGGAAATAACTCCACAGCTCTGGCTGCTC...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAAAGACTGTCTCTGGCTaGGGGCCGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGKTVSG*GPWLMP
Trigger: AGGCATGAGCCACGGCCCCCAGCCAGAGACAGTCTT...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AAGCACCATTTCCCCATCCTTGATGAGTTGATTATTTTTCACATAGTGCAAAGTCTTTCTGGGACAGGCTaGAGGGAGTACCTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KHHFPILDELIIFHIVQSLSGTG*REYLRC
Trigger: ACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAG...ACTTTGCACTATGTGAAAAATAATCAACTCATCAAGGATGGGGAAATGGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAATTGCCAGGGAGGCTCTaGAGGACAAGAATGCTATCA +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKLPGRL*RTRMLS
Trigger: TGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAA...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATCGCTGTATCAGCTGCTaGACACCCCGAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYRCISC*TPRTLF
Trigger: GAACAAGGTTCGGGGTGTTCAGCAGCTGATACAGCG...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGTGCCGGGCTCAATTGTaGTTACCATCCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWCRAQL*LPSQAA
Trigger: TGCAGCCTGGGATGGTAATCACAATTGAGCCCGGCA...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAATGAGAGGTGAGTCCTaGGTCACCACTACATCATCC +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKMRGES*VTTTSS
Trigger: GGATGATGTAGTGGTGACTCAGGACTCACCTCTCAT...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGATGGCCAGGCTGGTCTTaGCCTCCTGGTCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGWPGWS*PPGLKR
Trigger: TCTCTTGAGACCAGGAGGTCAAGACCAGCCTGGCCA...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAAACACCTATAGAACTTaGCTGGAATCTAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: REELQKVCIGRPQSPKDENTYRT*LESNQK
Trigger: CTTCTGGTTAGATTCCAGTCAAGTTCTATAGGTGTT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGGGTGGAGGTTGCAGTaGGCCAAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGGWRLQ*AKITPL
Trigger: CAGTGGTGTGATCTTGGCTCACTGCAACCTCCACCC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATGGCAGGAGAACTGCTTaGACCAGGGAGTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYGRRTA*TRELEV
Trigger: AACCTCCAACTCCCTGGTTCAAGCAGTTCTCCTGCC...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TGTGATGTCACTCACATAGCAGGAAGACTCACAACCTCCATCCAGAAGCACCATACATTAGTTTGTGTCTaGGAAGTGCATATTCCACCT +
Preference number: 4 (lower is better)
Translates to: CDVTHIAGRLTTSIQKHHTLVCV*EVHIPP
Trigger: AGGTGGAATATGCACTTCGCAGACACAAACTAATGT...ATGGTGCTTCTGGATGGAGGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGATGAGCTCAGCTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWMSSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGCTCAT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGCTGGGCATGGCAGCGTaGACCTGTAGTCCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMLGMAA*TCSPSY
Trigger: GTAACTGGGACTACAGGTGCACGCTGCCATGCCCAG...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TGTGATGTCACTCACATAGCAGGAAGACTCACAACCTCCATCCAGAAGCACCATCCCAGCCCTGATGTCTaGATCTTTAGTATATACATA +
Preference number: 4 (lower is better)
Translates to: CDVTHIAGRLTTSIQKHHPSPDV*IFSIYI
Trigger: TATGTATATACTAAAGATCCAGACATCAGGGCTGGG...ATGGTGCTTCTGGATGGAGGTTGTGAGTCTTCCTGCTATGTGAGTGACATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATAATAGCCGGGTGTGGTaGCAGGCGCCTGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYNSRVW*QAPVFL
Trigger: TAGGAATACAGGCGCCTGCCACCACACCCGGCTATT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTCTTTCTGGGACAGGCTaGAGGGAGTACCTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSLSGTG*REYLRC
Trigger: ACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAG...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTTGCCAGGGAGGCTCTaGAGGACAAGAATGCTATCA +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNLPGRL*RTRMLS
Trigger: TGATAGCATTCTTGTCCTTCAGAGCCTCCCTGGCAA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGTTTCTGCAGGAGACTTaGTCAGCCGGAGGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMFLQET*SAGGAV
Trigger: TACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAA...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAATAGTGCAAAGTGTTTaGCCGATTACCACCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKIVQSV*PITTSH
Trigger: GTGGCTGGTGGTAATCGGTCAAACACTTTGCACTAT...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATAGAAAGGATGAGAGGTaGGTCCTGAGTCACCACTAC +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNRKDER*VLSHHY
Trigger: GTAGTGGTGACTCAGGACTCACCTCTCATCCTTTCT...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTCACACAAACTTCTTATaGTATTGGGTTGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACHTNFL*YWVDLS
Trigger: GCTGAGATCAACCCAATATCATAAGAAGTTTGTGTG...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAAGCACTTTGGGAGGCTaGGGTGGGCAGATTATGAGG +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGSTLGG*GGQIMR
Trigger: CCTCATAATCTGCCCACCTCAGCCTCCCAAAGTGCT...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CCTGAGTCACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTAGCTTTGAAAAACTCTaGTTTCTTGTGGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PESPLHHPQFVHQDPETSSFEKL*FLVGFS
Trigger: ACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCT...AGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGTGACTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGGTGATGGTAATTGTTTaGCAGGGAGGCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWVMVIV*QGGSEG
Trigger: TCCTTCAGAGCCTCCCTGGCAAACAATTACCATCAC...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGACTATTGCTCCATCAGTaGCAGATCGCGGACCATCCC +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGLLLHQ*QIADHP
Trigger: GGGATGGTCCGCGATCTGGCACTGATGGAGCAATAG...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATCCCGAACCTTGTTCTTaGTCTTGGCTTTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYPEPCS*SWLWPQ
Trigger: CTGAGGCCAAAGCCAAGAGCAAGAACAAGGTTCGGG...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGCTGGACCTCCCAAAGTaGTGGGATTACAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMLDLPK*WDYRRN
Trigger: GTTCCGCCTGTAATCCCAGCACTTTGGGAGGTCCAG...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCTCCATTCTGAGAGCTaGTTAGATAAGGTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRLHSES*LDKVRK
Trigger: TTTGCGCACCTTATCTAAGCAGCTCTCAGAATGGAG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGGTAAAGGGGCTGGGCTaGCCTAAGTATCGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWVKGLG*PKYRFG
Trigger: TCCAAACCGATACTTAGGCCAGCCCAGCCCCTTTAC...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGACCCAAAGTTCTCGACTaGGATCTCGCCGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGPKVLD*DLAEAQ
Trigger: TTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGG...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTCTTGCTCTTGGCTTTaGCCTCAGTCAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSSCSWL*PQSGAA
Trigger: TGCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGGGAACGGGGCATGTCTaGAGTGTCATGGACATCCAT +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWGTGHV*SVMDIH
Trigger: ATGGATGTCCATGACACTCCAGACATGCCCCGTTCC...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATGGAACGGGGCATGTCTaGAGTGTCATGGACATCCAT +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYGTGHV*SVMDIH
Trigger: ATGGATGTCCATGACACTCCAGACATGCCCCGTTCC...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTAACCTGAGGTGCATGTaGGCCGCAGTGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSNLRCM*AAVKVK
Trigger: CTTGACCTTCACTGCGGCCCACATGCACCTCAGGTT...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGTTAACTGGAATGCATaGACATGTGTAACCAAGACC +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKVNWNA*TCVTKT
Trigger: GGTCTTGGTTACACATGTCCATGCATTCCAGTTAAC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGAAAAATAGCCGGGTGTaGTGGCAGGCGCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWKNSRV*WQAPVF
Trigger: GAATACAGGCGCCTGCCACCACACCCGGCTATTTTT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGTGACCATCCCTCCTTaGTCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGVTIPP*SPKVLG
Trigger: TCCCAGCACTTTGGGAGACCAAGGAGGGATGGTCAC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGCTGGTCTCAAACTCCTaGGCTCAAGTGACCATCCCT +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWLVSNS*AQVTIP
Trigger: AGGGATGGTCACTTGAGCCCAGGAGTTTGAGACCAG...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGACATTAGTTTGTGTCTaGGAAGTGCATATTCCACCT +
Preference number: 4 (lower is better)
Translates to: YGSSRYAGSRIGREELQKTLVCV*EVHIPP
Trigger: AGGTGGAATATGCACTTCGCAGACACAAACTAATGT...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGGGCTTCATAGAGTTCTaGCTGAGGTGCGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMGFIEF*LRCGEP
Trigger: AGGTTCACCGCACCTCAGGCAGAACTCTATGAAGCC...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTGAACCTGCCATTGACTaGCCACGTACGTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSEPAID*PRTCDV
Trigger: GACATCACACGTACGTGGCCAGTCAATGGCAGGTTC...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTGAAGGTCAAGAAGCCTaGCTGCATATCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFEGQEA*LHICSM
Trigger: CATTGAACAGATATGCAGCCAGGCTTCTTGACCTTC...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAACAGAAGGTATGTATTaGCCGCCCACAATCACCGAA +
Preference number: 4 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLATEGMY*PPTITE
Trigger: TTCGGTGATTGTGGGCGGCCAATACATACCTTCTGT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTTTGGGAAGCTGAGGTaGGTGGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSFGKLR*VDHKVR
Trigger: CCTGACCTTGTGATCCACCCACCTCAGCTTCCCAAA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CAA 72 bp TTACCTCCCCTTACAGCTTTGAAAAACTCTGATTTCTaGTGGGTTTCAGTGGTGAGCTGCATTTCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: LPPLTALKNSDF*WVSVVSCISLV
Trigger: AACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR TCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAACAGGGGTACTTCTCTaGAAACTGGGCGCTACTACT +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGTGVLL*KLGATT
Trigger: AGTAGTAGCGCCCAGTTTTCAGAGAAGTACCCCTGT...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTCTGCTCAACAAATCCTaGATATATCAGACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFLLNKS*IYQTAH
Trigger: ATGGGCTGTCTGATATATTCAGGATTTGTTGAGCAG...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAGTCAAGAAGCCTGGCTaGATATCTGTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKVKKPG*ISVQCH
Trigger: ATGACATTGAACAGATATGCAGCCAGGCTTCTTGAC...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGATTTTGAACCTGAGGTaGATGTGGGCCGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMILNLR*MWAAVK
Trigger: CTTCACTGCGGCCCACATGCACCTCAGGTTCAAAAT...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAATTCACACAGCTGCTATaGTCCCAAATGGAATGCATA +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKFTQLL*SQMECI
Trigger: TATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAA...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGAAGTCACTGCCTGTCTaGTTTTCACTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWKSLPV*FSLCTL
Trigger: CAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCATGTCCAAGTATGCTaGTATACATACAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRHVQVC*YTYKLP
Trigger: AGGTAGCTTGTATGTATAGCAGCATACTTGGACATG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGAATGACAGTTACAAGTaGTTTTCCCTTGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRNDSYK*FSLDGQ
Trigger: TTGCCCATCAAGGGAAAAGCACTTGTAACTGTCATT...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGTGGAATCCTCCTTTCTaGGACAGGCTGAAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMWNPPF*DRLKGV
Trigger: TACTCCCTTCAGCCTGTCCCAGAAAGGAGGATTCCA...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAGCCAAACAATCTCTTTaGATCTCTAGAACGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKAKQSL*ISRTAS
Trigger: TGAAGCCGTTCTAGAGATCCAAAGAGATTGTTTGGC...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTAAAATTAGCTGGGCATaGCAGCGTGCACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSKISWA*QRAPVV
Trigger: GACTACAGGTGCACGCTGCCATGCCCAGCTAATTTT...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTACAAAAATTGGGTGTaGTGGCAGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNYKNWV*WQVPVI
Trigger: GATTACAGGCACCTGCCACCACACCCAATTTTTGTA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTTGTTGCTACTGTCTGTaGTGCCTGCCTAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFCCYCL*CLPNFL
Trigger: TAGAAAATTAGGCAGGCACCACAGACAGTAGCAACA...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGCCAGGAGAACCCATGTaGTTTGTAACAGTGAAATTC +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWPGEPM*FVTVKF
Trigger: GAATTTCACTGTTACAAACCACATGGGTTCTCCTGG...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACC +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMSAYST*DSPGVT
Trigger: GGTAACTCCAGGACTATCTCAGGTGGAATATGCACT...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR TCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTTAGACCATAGAAAATaGTACAGGAGGTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSLDHRK*YRRCGG
Trigger: GCCACCGCACCTCCTGTATCATTTTCTATGGTCTAA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGATGACTCTTTACCACTaGACTCCCAGTGCTAGTATC +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWMTLYH*TPSASI
Trigger: GATACTAGCACTGGGAGTGCAGTGGTAAAGAGTCAT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGCTACAACAGCCTTTCTaGCTACCAATAACACCTATA +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWLQQPF*LPITPI
Trigger: TATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAG...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATAAGGTCTCTCTATGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYKVSLC*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAACATAGAGAGACCTT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGGTTTTCTCAGATTCTTaGGCAATTCCAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RILQQPFCLPITPIELDWVFSDS*AIPRSL
Trigger: AAGGCTTCTTGGAATTGCGCAAGAATCTGAGAAAAC...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGATGCTATCAGGCTCTTaGAATCCACATAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWMLSGS*NPHRYR
Trigger: CCTGTACCTATGTGGATTCCAAGAGCCTGATAGCAT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAATCTTTGTCATCCTCTaGAATATAAATGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAIFVIL*NINAGL
Trigger: GAGCCCGGCATTTATATTCCAGAGGATGACAAAGAT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAGGTATGTCTGCGGCATaGCTGAGAATGAGTAAGATC +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGGMSAA*LRMSKI
Trigger: GATCTTACTCATTCTCAGCCATGCCGCAGACATACC...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
3UTR CAA 72 bp AAGTTTTCTCAGATTCTTGCGCAATTCCAAGAAGCCTaGATTCCAGTGGGTCCTCTGATTCAAACAATAATG +
Preference number: 4 (lower is better)
Translates to: KFSQILAQFQEA*IPVGPLIQTIM
Trigger: CATTATTGTTTGAATCAGAGGACCCACTGGAATCAAGGCTTCTTGGAATTGCGCAAGAATCTGAGAAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTTCTATGAAAGCCTGTaGTGTCAGCTTCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSFYESL*CQLPSN
Trigger: ATTGCTGGGAAGCTGACATCACAGGCTTTCATAGAA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATACAGTATTTCTACGGTaGAGGTTTTTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNTVFLR*RFFPFS
Trigger: TGAGAAAGGGAAAAACCTTCACCGTAGAAATACTGT...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGACATTCGTTCAATTTCTaGAGGAGACTTGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGHSFNF*RRLDQP
Trigger: CGGCTGATCAAGTCTCCTGCAGAAATTGAACGAATG...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAATACATTCACACAGCTaGTATGCTCCCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLAIHSHS*YAPKWN
Trigger: ATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTAT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAGGTTTTGAAGGAAGATaGACACACAGTACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKGFEGR*THSTLS
Trigger: ACTTAAAGTACTGTGTGTGCATCTTCCTTCAAAACC...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATTGCTACTGTCTGTGGTaGCTGCCTAATTTTCTAATA +
Preference number: 4 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNCYCLW*LPNFLI
Trigger: TATTAGAAAATTAGGCAGGCACCACAGACAGTAGCA...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGATGCTATCAGGCTCTTaGAATCCACATAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMMLSGS*NPHRYR
Trigger: CCTGTACCTATGTGGATTCCAAGAGCCTGATAGCAT...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGCCCAGCCCTGATGTCTaGATCTTTAGTATATACATA +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWPSPDV*IFSIYI
Trigger: TATGTATATACTAAAGATCCAGACATCAGGGCTGGG...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTATTGAAGAGAAAAGATaGCAGGATGTCAGGATTTTA +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFIEEKR*QDVRIL
Trigger: TAAAATCCTGACATCCTGCCATCTTTTCTCTTCAAT...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGCCTATAGAACTTGACTaGAATCTAACCAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWPIELD*NLTRSV
Trigger: CACACTTCTGGTTAGATTCCAGTCAAGTTCTATAGG...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CCA 90 bp CCAGGCATTCCTAGGCTAGCACTGTCAGGATATGATTTGTATCACTTTTGTTTTATTGGCAGAAGTTATTaGAAACACTGTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: PGIPRLALSGYDLYHFCFIGRSY*KHCYKG
Trigger: TCCTTTGTAACAGTGTTTCCAATAACTTCTGCCAAT...AAAACAAAAGTGATACAAATCATATCCTGACAGTGCTAGCCTAGGAATGCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR TCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTCACACAAACTTCTTATaGTATTGGGTTGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSHTNFL*YWVDLS
Trigger: GCTGAGATCAACCCAATATCATAAGAAGTTTGTGTG...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTGGGAGCAGGGATATCTaGGAAAGAAATCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPLEVYELAKAVENYGKSGSRDI*ERNLSF
Trigger: AAAAGAAAGATTTCTTTCGCAGATATCCCTGCTCCC...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGTTTCATGTCCAAGTATaGTGCTATACATACAAGCTA +
Preference number: 4 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWFHVQV*CYTYKL
Trigger: TAGCTTGTATGTATAGCAGCATACTTGGACATGAAA...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR GCA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGCACACACAGCTTATCTaGTCAACAAATCCTGAATAT +
Preference number: 4 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMHTQLI*STNPEY
Trigger: ATATTCAGGATTTGTTGAGCAGATAAGCTGTGTGTG...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS GCA 90 bp CGCGTCGGGAAGAGAAAGAGGGTAACGACGGGGAACGCAACCGCCTaGAGGGCCGCGTCGCCAGGAAACCGGGCCAGCCGCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RVGKRKRVTTGNATA*RAASPGNRASRTSP
Trigger: AGGGGAGGTGCGGCTGGCCCGGTTTCCTGGCGACGCGGCCCTGCAGGCGGTTGCGTTCCCCGTCGTTACCCTCTTTCTCTTCCCGACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417688.5
CDS CCA 90 bp AAGACCCTGAGAGGCCGCGGACGTTTGCTACAGCGGGAACCAGCTTaGGGGCTGAGAGCAGCCAAGGCATTACGGCCTAACTCACGCGTC +
Preference number: 5 (lower is better)
Translates to: KTLRGRGRLLQREPA*GLRAAKALRPNSRV
Trigger: GACGCGTGAGTTAGGCCGTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTCTCAGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482652.1
ENST00000614001.1
CDS CCA 90 bp TACATCCTGAGAGGCCGCGGACGTTTGCTACAGCGGGAACCAGCTTaGGGGCTGAGAGCAGCCAAGGCATTACGGCCTAACTCACGCGTC +
Preference number: 5 (lower is better)
Translates to: YILRGRGRLLQREPA*GLRAAKALRPNSRV
Trigger: GACGCGTGAGTTAGGCCGTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTCTCAGGATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
CDS-3UTR CAA 90 bp ATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAAAAAGTATTCTTGCTCTTGGCTTaGGCCTCAGTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: IADHPKVLDWDLAEAQKVFLLLA*ASVRGC
Trigger: GCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGAA...TACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp AGGAAGTCACTGCCTGTCTGCTTTTCACTCTGTACCCTGGGTTTCCCTGATAAGCCTGGGAGATGGAGGTaGCAGGGAGCTGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RKSLPVCFSLCTLGFPDKPGRWR*QGAEVS
Trigger: CGAGACCTCAGCTCCCTGCAACCTCCATCTCCCAGG...CTTATCAGGGAAACCCAGGGTACAGAGTGAAAAGCAGACAGGCAGTGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp GGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATATTTCTGCAGGAGACTaGATCAGCCGGAGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GAAYSQSEAVHVRASSSHISAGD*ISRRRC
Trigger: ACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAAT...ATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp GGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATAGATGTTCTCCAAGCTaGTCCCAGGGAAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GAAYSQSEAVHVRASSSHRCSPS*SQGSRG
Trigger: CCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCT...ATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp CCAGGCTGCAGAGGGAGGGAACGGGGCATGTCTGGAGTGTCATGGACATCCATCAAAAACTCTGATTTCTaGTGGGTTTCAGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PGCRGRERGMSGVSWTSIKNSDF*WVSVVS
Trigger: GCTCACCACTGAAACCCACAAGAAATCAGAGTTTTT...GATGGATGTCCATGACACTCCAGACATGCCCCGTTCCCTCCCTCTGCAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS TCA 90 bp GGCTGGCCTAAGTATCGGTTTGGAATCCTCCTTTCTGGGACAGGCTaGAGGGAGTACCTTCGCTGTGAACACAACATACATCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GWPKYRFGILLSGTG*REYLRCEHNIHPER
Trigger: CCTCTCAGGATGTATGTTGTGTTCACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAGGAGGATTCCAAACCGATACTTAGGCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
CDS TCA 90 bp GGCTGGCCTAAGTATCGGTTTGGAATCCTCCTTTCTGGGACAGGCTaGAGGGAGTACCTTCGCTGTGAACACAACATACATCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: GWPKYRFGILLSGTG*REYLRCEHNIHPLA
Trigger: TGCCAGTGGATGTATGTTGTGTTCACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAGGAGGATTCCAAACCGATACTTAGGCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465258.1
CDS TCA 90 bp TACCTATTTGCAGTCACTACCTCTATCACCACCACCAGCAGAGCCTaGGCTGAGGAAACCACGGTTCTCAATACCCAGCACACCCACTTC +
Preference number: 5 (lower is better)
Translates to: YLFAVTTSITTTSRA*AEETTVLNTQHTHF
Trigger: GAAGTGGGTGTGCTGGGTATTGAGAACCGTGGTTTCCTCAGCTCAGGCTCTGCTGGTGGTGGTGATAGAGGTAGTGACTGCAAATAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482652.1
CDS-3UTR CAA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTGCGGTGAACCTGCCATaGACTGGCCACGTACGTGTG +
Preference number: 5 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACAVNLP*TGHVRV
Trigger: CACACGTACGTGGCCAGTCAATGGCAGGTTCACCGC...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS TCA 90 bp TGGATCAGAGACATTAGTTTGTGTCTGCGAAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACCTCCCCTGGTCTGAGGAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: WIRDISLCLRSAYST*DSPGVTSPGLRRCG
Trigger: CCCACACCTCCTCAGACCAGGGGAGGTAACTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTCTCTGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000465258.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAAACCTTGTTCTTGCTCTaGGCTTTGGCCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: REELQKVCIGRPQSPKDETLFLL*ALASVR
Trigger: CCTGACTGAGGCCAAAGCCAAGAGCAAGAACAAGGT...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp TGGAGTGTCATGGACATCCATCCCGAGGTAGTGGCCAACATGATGAGGACAGTACATAGTGCAAAGTGTTaGACCGATTACCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: WSVMDIHPEVVANMMRTVHSAKC*TDYHQP
Trigger: TGGCTGGTGGTAATCGGTCAAACACTTTGCACTATG...TACTGTCCTCATCATGTTGGCCACTACCTCGGGATGGATGTCCATGACACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp CACCAGCCACCACAGGTGGATAGGCTAAAATGTCTGCGCCACGAGCCCGGCATTCCCATCCTTGATGAGTaGATTATTTTTCACATAGTG +
Preference number: 5 (lower is better)
Translates to: HQPPQVDRLKCLRHEPGIPILDE*IIFHIV
Trigger: CACTATGTGAAAAATAATCAACTCATCAAGGATGGG...AATGCCGGGCTCGTGGCGCAGACATTTTAGCCTATCCACCTGTGGTGGCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp ACCACTACATCATCCTCAATTCGTACACCAAGACCCCGAAACTTCTCTGGGGCATACAGAAGGTATGTATaGGCCGCCCACAATCACCGA +
Preference number: 5 (lower is better)
Translates to: TTTSSSIRTPRPRNFSGAYRRYV*AAHNHR
Trigger: TCGGTGATTGTGGGCGGCCAATACATACCTTCTGTA...TGCCCCAGAGAAGTTTCGGGGTCTTGGTGTACGAATTGAGGATGATGTAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAACCGGAGCTCAGGAGTTaGAGACCGGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKPELRS*RPAWAT
Trigger: TGTTGCCCAGGCCGGTCTCAAACTCCTGAGCTCCGG...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGGCTGAGGCAGAAGAATaGCCTGAACCCGGGAGATGG +
Preference number: 5 (lower is better)
Translates to: YGSSRYAGSRIGREELQKAEAEE*PEPGRW
Trigger: CCATCTCCCGGGTTCAGGCAATTCTTCTGCCTCAGC...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS TCA 90 bp GTACGACTCTGGACTAGCTCTATTTGGAAGGTCCAGTCCCTACACTaGCCCCAGAATGACACCATAATGCAGCCCTCTCTGACATATTTG +
Preference number: 5 (lower is better)
Translates to: VRLWTSSIWKVQSLH*PQNDTIMQPSLTYL
Trigger: CAAATATGTCAGAGAGGGCTGCATTATGGTGTCATTCTGGGGTCAGTGTAGGGACTGGACCTTCCAAATAGAGCTAGTCCAGAGTCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482652.1
CDS-3UTR CAA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAAGAGGCCGCGGACGTTaGCTACAGCGGGAACCAGCT +
Preference number: 5 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLARGRGR*LQREPA
Trigger: AGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTCT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGAGATGTTCTCCAAGCTaGTCCCAGGGAAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: YGSSRYAGSRIGREELQKRCSPS*SQGSRG
Trigger: CCCTCTGCTTCCCTGGGACAAGCTTGGAGAACATCT...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACAGAAGACACCCATTTaGAACCTGAGGTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: REELQKVCIGRPQSPKDEQKTPI*NLRCMW
Trigger: CCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp ATCGCGGACCATCCCAAAGTTCTCGACTGGGATCTCGCCGAGGCACAAAAAGTACCTCCCCTTACAGCTTaGAAAAACTCTGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: IADHPKVLDWDLAEAQKVPPLTA*KNSDFL
Trigger: CAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGG...TACTTTTTGTGCCTCGGCGAGATCCCAGTCGAGAACTTTGGGATGGTCCGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATAGAGGCCGCGGACGTTaGCTACAGCGGGAACCAGCT +
Preference number: 5 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYRGRGR*LQREPA
Trigger: AGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTCT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp GGGGCTGCATATAGTCAGAGTGAAGCTGTGCATGTGAGGGCCTCATCCAGTCATCATAGGTACAGGAAATaGTTGTCTTGGTGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: GAAYSQSEAVHVRASSSHHRYRK*LSWWKV
Trigger: TACTTTCCACCAAGACAACAATTTCCTGTACCTATG...ATGACTGGATGAGGCCCTCACATGCACAGCTTCACTCTGACTATATGCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGACCTTGTTCTTGCTCTaGGCTTTGGCCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: YGSSRYAGSRIGREELQKTLFLL*ALASVR
Trigger: CCTGACTGAGGCCAAAGCCAAGAGCAAGAACAAGGT...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp AGGGAGGAGTTACAGAAGGTATGTATTGGCCGCCCACAATCACCGAAAGATGAACATAGTGCAAAGTGTTaGACCGATTACCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: REELQKVCIGRPQSPKDEHSAKC*TDYHQP
Trigger: TGGCTGGTGGTAATCGGTCAAACACTTTGCACTATG...TTCATCTTTCGGTGATTGTGGGCGGCCAATACATACCTTCTGTAACTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGCGGTGAACCTGCCATaGACTGGCCACGTACGTGTG +
Preference number: 5 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNAVNLP*TGHVRV
Trigger: CACACGTACGTGGCCAGTCAATGGCAGGTTCACCGC...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGAGTGACCATCCCTCCTaGGTCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RILQQPFCLPITPIELDWSDHPS*VSQSAG
Trigger: CCCAGCACTTTGGGAGACCAAGGAGGGATGGTCACT...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS CCA 90 bp CTGGAGTTACCTCCCCTTACAGCTTTGAAAAACTCTGATTTCTTGTaGGTTTCAGTGGTGAGCTGCATTTCCTTAGTTTCAGCCGACTTC +
Preference number: 5 (lower is better)
Translates to: LELPPLTALKNSDFL*VSVVSCISLVSADF
Trigger: GAAGTCGGCTGAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGGTAACTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS CCA 90 bp ATATTATGCAAGGGATATGCTGTGGCTATTAGCAACAGATTCCATTaGCTTATGAGGCACTGCCTGAAGCTTCCAGGGAAACATACAGGG +
Preference number: 5 (lower is better)
Translates to: ILCKGYAVAISNRFH*LMRHCLKLPGKHTG
Trigger: CCCTGTATGTTTCCCTGGAAGCTTCAGGCAGTGCCTCATAAGCCAATGGAATCTGTTGCTAATAGCCACAGCATATCCCTTGCATAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465258.1
ENST00000482652.1
CDS-3UTR CAA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGCAGGGTCTTTCTCTGTaGCCCAGGGTGAAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWQGLSL*PRVKWH
Trigger: GTGCCACTTCACCCTGGGCAACAGAGAAAGACCCTG...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp AGAATTCTACAACAGCCTTTCTGCCTACCAATAACACCTATAGAACTTGACTGGGGCCTAAGTATCGGTTaGGAATCCTCCTTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: RILQQPFCLPITPIELDWGLSIG*ESSFLG
Trigger: TCCCAGAAAGGAGGATTCCAAACCGATACTTAGGCC...CCAGTCAAGTTCTATAGGTGTTATTGGTAGGCAGAAAGGCTGTTGTAGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTTCTTGCTCTTGGCTTaGGCCTCAGTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LPLEVYELAKAVENYGKSFLLLA*ASVRGC
Trigger: GCAGCCCCTGACTGAGGCCAAAGCCAAGAGCAAGAA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TATGGCTCCAGTAGATATGCAGGATCTAGAATAGGTAGGGAGGAGTTACAGAAGCTAAAAATACAAAAATaGGGTGTGGTGGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: YGSSRYAGSRIGREELQKLKIQK*GVVAGA
Trigger: GGCACCTGCCACCACACCCAATTTTTGTATTTTTAG...CTTCTGTAACTCCTCCCTACCTATTCTAGATCCTGCATATCTACTGGAGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAGCAGGTTCCTTTATGTaGCTACTGTCTGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKAGSFM*LLSVVP
Trigger: AGGCACCACAGACAGTAGCAACATAAAGGAACCTGC...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS GCA 90 bp AGAGCTGGGAAGCAATTAAGGCGCAGTAATCTAGAGGTCATATTATaGAAGGGATATGCTGTGGCTATTAGCAACAGATTCCATTGGCTT +
Preference number: 5 (lower is better)
Translates to: RAGKQLRRSNLEVIL*KGYAVAISNRFHWL
Trigger: AAGCCAATGGAATCTGTTGCTAATAGCCACAGCATATCCCTTGCATAATATGACCTCTAGATTACTGCGCCTTAATTGCTTCCCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465258.1
ENST00000482652.1
CDS-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCCTAAGTATCGGTTaGGAATCCTCCTTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNGLSIG*ESSFLG
Trigger: TCCCAGAAAGGAGGATTCCAAACCGATACTTAGGCC...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp TTAAGTTACTCTCAGAAGCATTTTCCTAACGTGGATACTATGATTATGAGAGGAATTTCTGCAGGAGACTaGATCAGCCGGAGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: LSYSQKHFPNVDTMIMRGISAGD*ISRRRC
Trigger: ACAGCGCCTCCGGCTGATCAAGTCTCCTGCAGAAAT...TCCTCTCATAATCATAGTATCCACGTTAGGAAAATGCTTCTGAGAGTAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp ATAGGTACAGGAAATTGTTGTCTTGGTGGAAAGTATAGGGAATATCGTTGCTCACAGAAGACACCCATTTaGAACCTGAGGTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: IGTGNCCLGGKYREYRCSQKTPI*NLRCMW
Trigger: CCACATGCACCTCAGGTTCAAAATGGGTGTCTTCTG...TGAGCAACGATATTCCCTATACTTTCCACCAAGACAACAATTTCCTGTACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp CTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATGGCAAGAAAGGGGAGAAGCAGCATTaGTGCTTCACATTTCTGATC +
Preference number: 5 (lower is better)
Translates to: LYQESKHFPGPRQPNGKKGEKQH*CFTFLI
Trigger: GATCAGAAATGTGAAGCACAAATGCTGCTTCTCCCC...TTTCTTGCCATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp AAGCTTCTGTCCTATCAGGGTCAGCATCATGCTGTAGATGTTCTCCAAGCTTGTTATTTTCGAGCAGCCTaGAAGGCATTATTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: KLLSYQGQHHAVDVLQACYFRAA*KALFSL
Trigger: TAAGGAAAATAATGCCTTCAAGGCTGCTCGAAAATA...ACAAGCTTGGAGAACATCTACAGCATGATGCTGACCCTGATAGGACAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS-3UTR CAA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATCAAGGTCTCTCTATGTaGCCTAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYQGLSM*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAACATAGAGAGACCTTG...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS TCA 90 bp CCAACTGGGTTGCTATTAAGCTTACCTTACAGCTTTGAAAAACTCTaGTTTCTTGTGGGTTTCAGTGGTGAGCTGCATTTCCTTAGTTTC +
Preference number: 5 (lower is better)
Translates to: PTGLLLSLPYSFEKL*FLVGFSGELHFLSF
Trigger: GAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGTAAGCTTAATAGCAACCCAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417688.5
CDS GCA 90 bp TGGGTGGACAAAGATACTATAATCTCAAATGACTTACCACTGGCATaGAGAAAGTTAACATATCAGGCTACTTCCTCCAAGAGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: WVDKDTIISNDLPLA*RKLTYQATSSKRLS
Trigger: TGAAAGCCTCTTGGAGGAAGTAGCCTGATATGTTAACTTTCTGCATGCCAGTGGTAAGTCATTTGAGATTATAGTATCTTTGTCCACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482652.1
CDS-3UTR CAA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGCTCCAGTTAGAGCTATaGCTCCATCAGTGCCAGATC +
Preference number: 5 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMLQLEL*LHQCQI
Trigger: GATCTGGCACTGATGGAGCAATAGCTCTAACTGGAG...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp CATTTCCATCTTTATCAAGAATCTAAACACTTTCCAGGTCCCAGGCAACCAAATACAAGTGCTTTTCCCTaGATGGGCAATGACGTAACT +
Preference number: 5 (lower is better)
Translates to: HFHLYQESKHFPGPRQPNTSAFP*MGNDVT
Trigger: AGTTACGTCATTGCCCATCAAGGGAAAAGCACTTGT...ATTTGGTTGCCTGGGACCTGGAAAGTGTTTAGATTCTTGATAAAGATGGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp ACCAGAAGTGTGTTTCATGTCCAAGTATGCTGCTATACATACAAGCTACCTAGGCCCATCCTTGATGAGTaGATTATTTTTCACATAGTG +
Preference number: 5 (lower is better)
Translates to: TRSVFHVQVCCYTYKLPRPILDE*IIFHIV
Trigger: CACTATGTGAAAAATAATCAACTCATCAAGGATGGG...CCTAGGTAGCTTGTATGTATAGCAGCATACTTGGACATGAAACACACTTCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp ACACTAGTTGAGGGACAGCAGATAGGTTCTAACTCAAATTCTGTTTTATTGGCAAGTTTTCTCAGATTCTaGCGCAATTCCAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: TLVEGQQIGSNSNSVLLASFLRF*RNSKKP
Trigger: AGGCTTCTTGGAATTGCGCAAGAATCTGAGAAAACT...TGCCAATAAAACAGAATTTGAGTTAGAACCTATCTGCTGTCCCTCAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTCTAGCCCTGTTCATCTaGCAAACTGAGTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: LPLEVYELAKAVENYGKSLALFI*QTELLY
Trigger: ATACAGCAACTCAGTTTGCAAGATGAACAGGGCTAG...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp ACACAATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATATCAGAGACATTAGTTaGTGTCTGCGAAGTGCATAT +
Preference number: 5 (lower is better)
Translates to: TQLHTFTQLLCSQMECIYIRDIS*CLRSAY
Trigger: ATATGCACTTCGCAGACACAAACTAATGTCTCTGAT...ATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAATTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS-3UTR CAA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGAACTTGCAAAGGCAGTaGAAAACTATGGTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWNLQRQ*KTMVSL
Trigger: AAGACTTACCATAGTTTTCAACTGCCTTTGCAAGTT...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp TTACCCTTAGAAGTTTATGAACTTGCAAAGGCAGTTGAAAACTATGGTAAGTCTTGTGGGTGTGGATATTaGGAAAGACATAACAAAGGT +
Preference number: 5 (lower is better)
Translates to: LPLEVYELAKAVENYGKSCGCGY*ERHNKG
Trigger: ACCTTTGTTATGTCTTTCCAAATATCCACACCCACA...AGACTTACCATAGTTTTCAACTGCCTTTGCAAGTTCATAAACTTCTAAGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp CCAGTGCTAGTATCAAAGAAAGATAAGAATCATAGGATATTTACGGGTACTTGGTATTGGCAGAAGTTATaGGAAACACTGTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: PVLVSKKDKNHRIFTGTWYWQKL*ETLLQR
Trigger: CCTTTGTAACAGTGTTTCCAATAACTTCTGCCAATA...CCAAGTACCCGTAAATATCCTATGATTCTTATCTTTCTTTGATACTAGCACTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357137.9
CDS-3UTR CAA 90 bp ATTACATACATTCACACAGCTGCTATGCTCCCAAATGGAATGCATATATTAATGTATTTTCGAGCAGCCTaGAAGGCATTATTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: ITYIHTAAMLPNGMHILMYFRAA*KALFSL
Trigger: TAAGGAAAATAATGCCTTCAAGGCTGCTCGAAAATA...CATTAATATATGCATTCCATTTGGGAGCATAGCAGCTGTGTGAATGTATGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000428799.1
CDS GCA 72 bp AAGAGAAAGAGGGTAACGACGGGGAACGCAACCGCCTaGAGGGCCGCGTCGCCAGGAAACCGGGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: KRKRVTTGNATA*RAASPGNRASR
Trigger: GCGGCTGGCCCGGTTTCCTGGCGACGCGGCCCTGCAGGCGGTTGCGTTCCCCGTCGTTACCCTCTTTCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417688.5
CDS TCA 72 bp GCGGACGTTTGCTACAGCGGGAACCAGCTTGGGGGCTaGGAGCAGCCAAGGCATTACGGCCTAACTCACGCG +
Preference number: 6 (lower is better)
Translates to: ADVCYSGNQLGG*EQPRHYGLTHA
Trigger: CGCGTGAGTTAGGCCGTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTGTAGCAAACGTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
ENST00000482652.1
ENST00000614001.1
CDS CCA 72 bp AGAGGCCGCGGACGTTTGCTACAGCGGGAACCAGCTTaGGGGCTGAGAGCAGCCAAGGCATTACGGCCTAAC +
Preference number: 6 (lower is better)
Translates to: RGRGRLLQREPA*GLRAAKALRPN
Trigger: GTTAGGCCGTAATGCCTTGGCTGCTCTCAGCCCCCAAGCTGGTTCCCGCTGTAGCAAACGTCCGCGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
ENST00000482652.1
ENST00000614001.1
CDS CCA 72 bp GGTCTGAGGAGGTGTGGGTGTGTAAAGGGGCTGGGCTaGCCTAAGTATCGGTTTGGAATCCTCCTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: GLRRCGCVKGLG*PKYRFGILLSG
Trigger: CCCAGAAAGGAGGATTCCAAACCGATACTTAGGCCAGCCCAGCCCCTTTACACACCCACACCTCCTCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
ENST00000465258.1
CDS TCA 72 bp TGGACTAGCTCTATTTGGAAGGTCCAGTCCCTACACTaGCCCCAGAATGACACCATAATGCAGCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: WTSSIWKVQSLH*PQNDTIMQPSL
Trigger: CAGAGAGGGCTGCATTATGGTGTCATTCTGGGGTCAGTGTAGGGACTGGACCTTCCAAATAGAGCTAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482652.1
CDS CCA 72 bp ACAGTCCAGAGGATTCAGGATGGTCTGGTACGACTCTaGACTAGCTCTATTTGGAAGGTCCAGTCCCTACAC +
Preference number: 6 (lower is better)
Translates to: TVQRIQDGLVRL*TSSIWKVQSLH
Trigger: GTGTAGGGACTGGACCTTCCAAATAGAGCTAGTCCAGAGTCGTACCAGACCATCCTGAATCCTCTGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482652.1
CDS TCA 72 bp GACATTAGTTTGTGTCTGCGAAGTGCATATTCCACCTaGGATAGTCCTGGAGTTACCTCCCCTGGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: DISLCLRSAYST*DSPGVTSPGLR
Trigger: CCTCAGACCAGGGGAGGTAACTCCAGGACTATCTCAGGTGGAATATGCACTTCGCAGACACAAACTAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357137.9
ENST00000465258.1
CDS TCA 72 bp CCTTTCTGGGACAGGCTGAAGGGAGTACCTTCGCTGTaGACACAACATACATCCACTGGCATGCAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: PFWDRLKGVPSL*TQHTSTGMQKV
Trigger: AACTTTCTGCATGCCAGTGGATGTATGTTGTGTTCACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465258.1
CDS CAA 90 bp GTCCTGGAGTTACCTCCCCTTACAGCTTTGAAAAACTCTGATTTCTaGTGGGTTTCAGTGGTGAGCTGCATTTCCTTAGTTTCAGCCGAC +
Preference number: 6 (lower is better)
Translates to: VLELPPLTALKNSDF*WVSVVSCISLVSAD
Trigger: GTCGGCTGAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGGTAACTCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS TCA 72 bp AAGTATCGGTTTGGAATCCTCCTTTCTGGGACAGGCTaGAGGGAGTACCTTCGCTGTGAACACAACATACAT +
Preference number: 6 (lower is better)
Translates to: KYRFGILLSGTG*REYLRCEHNIH
Trigger: ATGTATGTTGTGTTCACAGCGAAGGTACTCCCTTCAGCCTGTCCCAGAAAGGAGGATTCCAAACCGATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357137.9
ENST00000417688.5
ENST00000428799.1
ENST00000465258.1
CDS GCA 72 bp AAAAACTCTGATTTCTTGTGGGTTTCAGTGGTGAGCTaGATTTCCTTAGTTTCAGCCGACTTCCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: KNSDFLWVSVVS*ISLVSADFPAG
Trigger: TCCTGCTGGGAAGTCGGCTGAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417688.5
ENST00000428799.1
CDS CCA 72 bp CCTCCCCTTACAGCTTTGAAAAACTCTGATTTCTTGTaGGTTTCAGTGGTGAGCTGCATTTCCTTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: PPLTALKNSDFL*VSVVSCISLVS
Trigger: TGAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428799.1
CDS GCA 72 bp AAGCAATTAAGGCGCAGTAATCTAGAGGTCATATTATaGAAGGGATATGCTGTGGCTATTAGCAACAGATTC +
Preference number: 6 (lower is better)
Translates to: KQLRRSNLEVIL*KGYAVAISNRF
Trigger: GAATCTGTTGCTAATAGCCACAGCATATCCCTTGCATAATATGACCTCTAGATTACTGCGCCTTAATTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465258.1
ENST00000482652.1
CDS CCA 72 bp GCTTACCTTACAGCTTTGAAAAACTCTGATTTCTTGTaGGTTTCAGTGGTGAGCTGCATTTCCTTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: AYLTALKNSDFL*VSVVSCISLVS
Trigger: TGAAACTAAGGAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGTAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417688.5
CDS TCA 72 bp TTGCTATTAAGCTTACCTTACAGCTTTGAAAAACTCTaGTTTCTTGTGGGTTTCAGTGGTGAGCTGCATTTC +
Preference number: 6 (lower is better)
Translates to: LLLSLPYSFEKL*FLVGFSGELHF
Trigger: GAAATGCAGCTCACCACTGAAACCCACAAGAAATCAGAGTTTTTCAAAGCTGTAAGGTAAGCTTAATAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417688.5