RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XPNPEP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122121

Ensembl transcript IDs: ENST00000371105.7, ENST00000371106.4, ENST00000681234.1

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTTGATGTTTCATGCCCTGGCTGGGTGGGAACAGCTCTGGCTATaGCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGC +
Preference number: 1 (lower is better)
Translates to: GLMFHALAGWEQLWL*PTGGDRFGLSRDHG
Trigger: GCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACCCAGCCAGGGCATGAAACATCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR TCA 90 bp GAGGGCTGGGAGGTGGGCTCAGGGACTCTGCATGTTGCTGAAGGGTaGAAGAGCTGGAATGCTGGCTCATCTGGCCCCATCAACTCCCAA +
Preference number: 1 (lower is better)
Translates to: EGWEVGSGTLHVAEG*KSWNAGSSGPINSQ
Trigger: TTGGGAGTTGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCTCCCAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR TCA 90 bp TTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATaGATGCAAAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: FLGPGTFSIGLGEGG*MQRFLGNGPAGALG
Trigger: CCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTTTGCATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 90 bp AGAGTGCCTCACCGCATTCCCTCTTACTCCACAGCCAAATTCCTATaGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGG +
Preference number: 1 (lower is better)
Translates to: RVPHRIPSYSTAKFL*LNSLCCYLAWSLPR
Trigger: CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTAAGAGGGAATGCGGTGAGGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 90 bp ACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTaGCATGGAGCCTACCCAGGGTTTAGGAATGATGGGTTCACATGT +
Preference number: 1 (lower is better)
Translates to: TPQPNSYGLTPSAVT*HGAYPGFRNDGFTC
Trigger: ACATGTGAACCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 90 bp AAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTTaGAAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAGTCTAGAATA +
Preference number: 1 (lower is better)
Translates to: KNVGGFNSIVAVAAL*KVQRAPRMPGKSRI
Trigger: TATTCTAGACTTCCCTGGCATTCGAGGAGCCCTTTGAACTTTCCAAAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CAA 90 bp CTGGGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTaGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGTAGGGGCATT +
Preference number: 2 (lower is better)
Translates to: LGGNSSGYAQQVVIG*GSPGTMAPLGGRGI
Trigger: AATGCCCCTACCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTGCTCTCCCGGGACCATaGCACCCTTGGGTGGTAGGG +
Preference number: 2 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVALPGP*HPWVVG
Trigger: CCCTACCACCCAAGGGTGCCATGGTCCCGGGAGAGC...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR GCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGCGGGGTGCAGGGAGGTaGCATCTGGGGCCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVRGAGR*HLGPRS
Trigger: GCTTCTTGGCCCCAGATGGCACCTCCCTGCACCCCG...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR GCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTATACAACCCCGGGGTaGAGGGAGGTGCCATCTGGG +
Preference number: 2 (lower is better)
Translates to: VLAGCGPRWLTANLAGANYTTPG*REVPSG
Trigger: CCCAGATGGCACCTCCCTGCACCCCGGGGTTGTATA...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTCAGGGAGGTGCCATCTaGGGCCAAGAAGCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVQGGAI*GQEALC
Trigger: ACACAGGGCTTCTTGGCCCCAGATGGCACCTCCCTG...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR TCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATAGCCCACCCCCTGTCTaGAGCTCAGTTTTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: VLAGCGPRWLTANLAGANSPPPV*SSVFLS
Trigger: AGACAGGAAAACTGAGCTTCAGACAGGGGGTGGGCT...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR GCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGGGTCATATTCCAGAGTaGCTCACCGCATTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: PRWLTANLAGANSSHHSGGHIPE*LTAFPL
Trigger: AAGAGGGAATGCGGTGAGGCACTCTGGAATATGACC...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTGCCAGCAGGGGCTCTTaGGGTATGTTCAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GASKNVGGFNSIVAVAALASRGS*GMFSAG
Trigger: CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGC...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATAAGGTTTCTAGGCAATaGGCCAGCAGGGGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNKVSRQ*ASRGSW
Trigger: CCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp ACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGTTTAGGAATGATGGGTGTGTTCCTGGGGCCTaGGACCTTCTCCATAGGTCT +
Preference number: 2 (lower is better)
Translates to: TPSAVTWHGAYPGFRNDGCVPGA*DLLHRS
Trigger: AGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA...CCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTGGACCATGGCACCCTTaGGTGGTAGGGGCATTGCTC +
Preference number: 2 (lower is better)
Translates to: GASKNVGGFNSIVAVAALGPWHP*VVGALL
Trigger: GAGCAATGCCCCTACCACCCAAGGGTGCCATGGTCC...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGCATGCCCTGGCTGGGTaGGAACAGCTCTGGCTATGC +
Preference number: 2 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRHALAG*EQLWLC
Trigger: GCATAGCCAGAGCTGTTCCCACCCAGCCAGGGCATG...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp AAGTCTAGAATAGTGACGGGTTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGAGAGAAGAGACTAGCTaGCTTTCCTATCTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: KSRIVTGSGCPSLFSNLWREETS*LSYLGA
Trigger: GGCCCCGAGATAGGAAAGCCAGCTAGTCTCTTCTCT...CCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAACCCGTCACTATTCTAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR GCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTATGGCTTAACTCCCTCTaGTGTTACTTGGCATGGAGC +
Preference number: 2 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLWLNSL*CYLAWS
Trigger: GCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCA...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp TGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGGCTCATCTGGCCCCATCATTCCTGTCTGTAAAATaGAGAAACCAGACACTGTCC +
Preference number: 2 (lower is better)
Translates to: CMLLKGERAGMLAHLAPSFLSVK*RNQTLS
Trigger: GGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA...TGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTACAGCCAAATTCCTATaGCTTAACTCCCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GASKNVGGFNSIVAVAALTAKFL*LNSLCC
Trigger: ACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGT...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR TCA 72 bp GGGCTGGGAGGTGGGCTCAGGGACTCTGCATGTTGCTaGAGGGTGAAAGAGCTGGAATGCTGGCTCATCTGG +
Preference number: 3 (lower is better)
Translates to: GLGGGLRDSACC*RVKELECWLIW
Trigger: CCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCTCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR GCA 72 bp TTTCATGCCCTGGCTGGGTGGGAACAGCTCTGGCTATaGCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGG +
Preference number: 3 (lower is better)
Translates to: FHALAGWEQLWL*PTGGDRFGLSR
Trigger: CCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACCCAGCCAGGGCATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CAA 90 bp GCCCCATCAACTCCCAACCAAATTTGTGTGTCCTTAGGCAAAGCCCACCCCCTGCAGGTGGTGATAGGTTaGGGCTCTCCCGGGACCATG +
Preference number: 3 (lower is better)
Translates to: APSTPNQICVSLGKAHPLQVVIG*GSPGTM
Trigger: CATGGTCCCGGGAGAGCCCAAACCTATCACCACCTG...CAGGGGGTGGGCTTTGCCTAAGGACACACAAATTTGGTTGGGAGTTGATGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR-3UTR CAA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGTCCCTCTGCTGTTACTaGGCATGGAGCCTACCCAGG +
Preference number: 3 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVSLCCY*AWSLPR
Trigger: CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGA...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR TCA 72 bp CCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATaGATGCAAAGGTTTCTAGGCAATGGGCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: PGTFSIGLGEGG*MQRFLGNGPAG
Trigger: CCCTGCTGGCCCATTGCCTAGAAACCTTTGCATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp TGGAGAAGGAGGATGAATGCAAAGGTTTCTAGGCAATaGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: WRRRMNAKVSRQ*ASRGSWGMFSA
Trigger: TGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTTTGCATTCATCCTCCTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp CACCGCATTCCCTCTTACTCCACAGCCAAATTCCTATaGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGC +
Preference number: 3 (lower is better)
Translates to: HRIPSYSTAKFL*LNSLCCYLAWS
Trigger: GCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTAAGAGGGAATGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp TCTTTGTTAGGCTGTTTTAAACGTCTTAGCAGGATGTaGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGC +
Preference number: 3 (lower is better)
Translates to: SLLGCFKRLSRM*TQVANGQFGRS
Trigger: GCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGACGTTTAAAACAGCCTAACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTaGCATGGAGCCTACCCAGGGTTTAGGAATGATGGG +
Preference number: 3 (lower is better)
Translates to: PNSYGLTPSAVT*HGAYPGFRNDG
Trigger: CCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp GGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTTaGAAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GGFNSIVAVAAL*KVQRAPRMPGK
Trigger: CTTCCCTGGCATTCGAGGAGCCCTTTGAACTTTCCAAAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CCA 72 bp GCTGTTTTAAACGTCTTAGCAGGATGTGGACCCAGGTaGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCT +
Preference number: 3 (lower is better)
Translates to: AVLNVLAGCGPR*LTANLAGANSS
Trigger: AGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGACGTTTAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGGCTCTCCCGGGACCATaGCACCCTTGGGTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWALPGP*HPWVVG
Trigger: CCCTACCACCCAAGGGTGCCATGGTCCCGGGAGAGC...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGACAGAGGGTGGGGGCTaGCGTCAAGAAGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWTEGGG*RQEGGV
Trigger: GACGCCTCCTTCTTGACGCCAGCCCCCACCCTCTGT...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTGGGCAGCAGCCCCAGTaGGCCCGGGCCATAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVGQQPQ*ARAIGS
Trigger: AGACCCTATGGCCCGGGCTCACTGGGGCTGCTGCCC...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGAAGGAGGCGTCTGGCTaGTGGGTGGAGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWKEASG*WVESAS
Trigger: AGAAGCACTCTCCACCCAGCAGCCAGACGCCTCCTT...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGCGGGGTGCAGGGAGGTaGCATCTGGGGCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGRGAGR*HLGPRS
Trigger: GCTTCTTGGCCCCAGATGGCACCTCCCTGCACCCCG...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAACACTGGCTCGAAGGTTaGAGAGCCAGGCCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQHWLEG*RARPSP
Trigger: AGGAGACGGCCTGGCTCTTCAACCTTCGAGCCAGTG...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGGCCTTGAGGAGGGCCTaGTCCTTGCTGTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWALRRA*SLLFFT
Trigger: AGTGAAGAACAGCAAGGAGCAGGCCCTCCTCAAGGC...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGGGAAGGCAGAGGGGGTaGCCCAGTGGACTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGGRQRG*PSGLFW
Trigger: CCAGAACAGTCCACTGGGGCACCCCCTCTGCCTTCC...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATACAGCGTCCCGCACGTaGCTGGCCTTGAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNTASRT*LALRRA
Trigger: GGCCCTCCTCAAGGCCAGCCACGTGCGGGACGCTGT...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGGCGCCTCTGCAGCTCTaGACCCACCTTCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGAPLQL*THLLPD
Trigger: ATCCGGGAGAAGGTGGGTCCAGAGCTGCAGAGGCGC...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGAAGGTTTCTAGGCAATaGGCCAGCAGGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWKVSRQ*ASRGSW
Trigger: CCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CAA 72 bp AACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTaGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NSSGYAQQVVIG*GSPGTMAPLGG
Trigger: ACCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGGCACGTGGCTGGCCTTaGGGAGGGCCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVARGWP*GGPAPC
Trigger: GCAAGGAGCAGGCCCTCCTCAAGGCCAGCCACGTGC...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCTTCTGGGTCTGCATCTaGTGGCGGAGGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPFWVCI*WRRAVS
Trigger: ACTCACAGCCCTCCGCCAGCAGATGCAGACCCAGAA...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGAGTAGCTGGCGCCTCTaGAGCTCTGGACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGSSWRL*SSGPTF
Trigger: GAAGGTGGGTCCAGAGCTGCAGAGGCGCCAGCTACT...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGGAGGCGTCTGGCTGCTaGGTGGAGAGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGEASGC*VESASL
Trigger: CAGAGAAGCACTCTCCACCCAGCAGCCAGACGCCTC...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATCCGGCGCTGGGTGGATaGAGGGACAAGGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNPALGG*RDKGER
Trigger: CCTCTCTCCCTTGTCCCTCCATCCACCCAGCGCCGG...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCTCCACTGGCTTTGTGTaGCCCCAGGCACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPSTGFV*PQAQAQ
Trigger: CTGTGCTTGTGCCTGGGGCCACACAAAGCCAGTGGA...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCCCCATCAACTCCCAACCAAATTTGTGTGTCCTTAGGCAAAGCCCACCCCCTGCCCTCCAAGGTCCACTaGCTTTGTGTGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: APSTPNQICVSLGKAHPLPSKVH*LCVAPG
Trigger: GCCTGGGGCCACACAAAGCCAGTGGACCTTGGAGGG...CAGGGGGTGGGCTTTGCCTAAGGACACACAAATTTGGTTGGGAGTTGATGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGCAAGGATGGCAAGGGTaGAGACCACTAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWQGWQG*RPLTQR
Trigger: CCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTG...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGCATGCCCTGGCTGGGTaGGAACAGCTCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGHALAG*EQLWLC
Trigger: GCATAGCCAGAGCTGTTCCCACCCAGCCAGGGCATG...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGTTTCATGCCCTGGCTaGGTGGGAACAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPVSCPG*VGTALA
Trigger: AGCCAGAGCTGTTCCCACCCAGCCAGGGCATGAAAC...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AGGTGGGCTCAGGGACTCTGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGGAGAGGGCTGGGAGGTaGGCTCAGGGACTCTGCATG +
Preference number: 4 (lower is better)
Translates to: RWAQGLCMLLKGERAGMLERAGR*AQGLCM
Trigger: CATGCAGAGTCCCTGAGCCCACCTCCCAGCCCTCTC...CAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAAGGATGTGGACCCAGGTaGCTAACGGCCAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQGCGPR*LTANLA
Trigger: GGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCC...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATAACCGGTGGCCTCTCTaGTCCCCATACCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLAGCGPRWLTANLAGANNRWPL*SPYQVH
Trigger: GTGGACCTGGTATGGGGATCAGAGAGGCCACCGGTT...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGCGGTGTCTGGGGCCCTaGCGGCCAGGGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWRCLGP*RPGALC
Trigger: ACACAGAGCCCCTGGCCGCCAGGGCCCCAGACACCG...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCCCCATCAACTCCCAACCAAATTTGTGTGTCCTTAGGCAAAGCCCACCCCCTGGCCAGCAGGGGCTCTTaGGGTATGTTCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: APSTPNQICVSLGKAHPLASRGS*GMFSAG
Trigger: CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGC...CAGGGGGTGGGCTTTGCCTAAGGACACACAAATTTGGTTGGGAGTTGATGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGGCGGAGGGCTGTGAGTaGCATTGTGGTATTGACCAC +
Preference number: 4 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGAEGCE*HCGIDH
Trigger: GTGGTCAATACCACAATGTCACTCACAGCCCTCCGC...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGTCCCGTCCCAGTACTaGCCCCCAGAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PNSYGLTPSAVTWHGAYPVPSQY*PPESSR
Trigger: CCTGCTGGACTCTGGGGGGCAGTACTGGGACGGGAC...TGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATCATCCCACAAGGCTCTaGGGGCAAAGGCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNHPTRL*GQRPPP
Trigger: TGGTGGAGGCCTTTGCCCGCAGAGCCTTGTGGGATG...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATGCACACACAGGAAGTTaGCAATGCCGTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLAGCGPRWLTANLAGANAHTGS*QCRGLS
Trigger: GGACAGGCCACGGCATTGGCAACTTCCTGTGTGTGC...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAGTCTAGAATAGTGACGGGTTCCTGGGCAGAGGAGCTTTaGGCTGCCCGAGGCGGACTG +
Preference number: 4 (lower is better)
Translates to: KVQRAPRMPGKSRIVTGSWAEEL*AARGGL
Trigger: CAGTCCGCCTCGGGCAGCCCAAAGCTCCTCTGCCCA...GGAACCCGTCACTATTCTAGACTTCCCTGGCATTCGAGGAGCCCTTTGAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAATCTGGTCTTTTGTTTTaGAGGGCTCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQSGLLF*RALGAR
Trigger: CCTGGCTCCCAGAGCCCTCCAAAACAAAAGACCAGA...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCCATCTGTGCCTGGGATaGTGTAGGCTGAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPHLCLG*CRLRDS
Trigger: AGAATCTCTCAGCCTACATCATCCCAGGCACAGATG...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp AAGTCTAGAATAGTGACGGGTTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGGCCAAGTGCTCCCTGTaGATGCCTCCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KSRIVTGSGCPSLFSNLWAKCSL*MPPAGH
Trigger: ATGCCCTGCAGGAGGCATTCACAGGGAGCACTTGGC...CCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAACCCGTCACTATTCTAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAATGGGTACTTGGTCTTTaGTTCTACCACGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQWVLGL*FYHESH
Trigger: GTGGCTCTCGTGGTAGAAGCAAAGACCAAGTACCCA...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGTCCAGATGCCGGCGCTaGGTGGATGGAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRSRCRR*VDGGTR
Trigger: CCTTGTCCCTCCATCCACCCAGCGCCGGCATCTGGA...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACAGCCCATCCACTGTGCCTTTaGGCACGTTCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVGSYSRVPHRIPSYSTAHPLCL*ARSSPA
Trigger: GGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATG...GGCTGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATGCGGTTCAGCTCCTTaGTCGGGCTGTAGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RNQTLSTQGEGASKNVGGCGSAP*SGCSGP
Trigger: TGGCCCACTACAGCCCGACCAAGGAGCTGAACCGCA...TCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGCAGGGAGGTGCCATCTaGGGCCAAGAAGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVQGGAI*GQEALC
Trigger: ACACAGGGCTTCTTGGCCCCAGATGGCACCTCCCTG...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGAGAGAAGAGACTAGCTaGCTTTCCTATCTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGREETS*LSYLGA
Trigger: GGCCCCGAGATAGGAAAGCCAGCTAGTCTCTTCTCT...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAAAAAGAGCTGGAATGCTaGCTCATCTGGCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQKELEC*LIWPHQ
Trigger: TTGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTT...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTGGGATGATGTAGGCTaGGAGATTCTGGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGWDDVG*EILGLH
Trigger: ATGCAGACCCAGAATCTCTCAGCCTACATCATCCCA...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATCCTCACATCTCCCAATaGGTAGGCCTGGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNPHISQ*VGLDAV
Trigger: GACAGCATCCAGGCCTACTCATTGGGAGATGTGAGG...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACAGCCCAGGTACATCTCATCTaGGGACAGCTTGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVGSYSRVPHRIPSYSTAQVHLI*GQLAVQ
Trigger: CTGAACCGCAAGCTGTCCTCAGATGAGATGTACCTG...GGCTGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CCTCTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACAGGCTCTGTGTGCTGTTaGAGCCACTCGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLVGSYSRVPHRIPSYSTGSVCC*SHSNSS
Trigger: AGAGGAGTTCGAGTGGCTTCAACAGCACACAGAGCC...TGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACATAGGGTCTCCAGATaGCGGCGCTGGGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: EGASKNVGGFNSIVAVAAHRVSR*RRWVDG
Trigger: TCCATCCACCCAGCGCCGGCATCTGGAGACCCTATG...TGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTGGGGTTGATGTTTCATaGCCTGGCTGGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVGVDVS*PGWVGT
Trigger: TGTTCCCACCCAGCCAGGGCATGAAACATCAACCCC...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGGGTCATATTCCAGAGTaGCTCACCGCATTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGGHIPE*LTAFPL
Trigger: AAGAGGGAATGCGGTGAGGCACTCTGGAATATGACC...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCATGGGTCTGCATCTGCTaGCGGAGGGCTGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PNSYGLTPSAVTWHGAYPWVCIC*RRAVSD
Trigger: GTCACTCACAGCCCTCCGCCAGCAGATGCAGACCCA...TGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTCGCCTCTCGTCATGTTaGCCGATGTACTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: GPRWLTANLAGANSSHHSRLSSC*PMYSFM
Trigger: CATGAACGAGTACATCGGCCAACATGACGAGAGGCG...ACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTCGATTTGCACACACATaGGGCCTGTGCAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: GPRWLTANLAGANSSHHSRFAHT*GLCNWS
Trigger: ACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCG...ACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCATAGATCCCATACATaGTATAGCTGGTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: WLCPTGGDRFGLSRDHGTHRSHT*YSWSQS
Trigger: GGATTGGGACCAGCTATACCATGTATGGGATCTATG...GGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCAGTGTATGCCTCCTTCTaGAAGGCAGAGGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EGASKNVGGFNSIVAVAAVYASF*KAEGVP
Trigger: GGGCACCCCCTCTGCCTTCCAGAAGGAGGCATACAC...TGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTAACTCCTCTAGTAGCTaGCGCCTCTGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVNSSSS*RLCSSG
Trigger: TCCAGAGCTGCAGAGGCGCCAGCTACTAGAGGAGTT...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCTCTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACATGTGTTCCTGGGGCCTaGGACCTTCTCCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLVGSYSRVPHRIPSYSTCVPGA*DLLHRS
Trigger: AGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA...TGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCAGGACCATGGCACCCTTaGGTGGTAGGGGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: HCPHKVKGHPRMWEDLTAGPWHP*VVGALL
Trigger: GAGCAATGCCCCTACCACCCAAGGGTGCCATGGTCC...TGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGACCCTCTGCTGTTACTTaGCATGGAGCCTACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RNQTLSTQGEGASKNVGGPSAVT*HGAYPG
Trigger: CCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGG...TCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGACGTCTTAGCAGGATGTaGACCCAGGTGGCTAACGGC +
Preference number: 4 (lower is better)
Translates to: RNQTLSTQGEGASKNVGGRLSRM*TQVANG
Trigger: GCCGTTAGCCACCTGGGTCCACATCCTGCTAAGACG...TCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
3UTR CAA 72 bp TTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTaGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LAGCGPRWLTAN*AGANSSHHSGF
Trigger: GAACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGTCATAGGGCACAAATaGTACCACTTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPVIGHK*YHFKGQ
Trigger: CTGACCTTTGAAGTGGTATCATTTGTGCCCTATGAC...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGCTTGGAGAAGGAGGATaGATGCAAAGGTTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: PRWLTANLAGANSSHHSGLGEGG*MQRFLG
Trigger: GCCTAGAAACCTTTGCATTCATCCTCCTTCTCCAAG...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGAGAGATTCTGGGTCTaGATCTGCTGGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRERFWV*ICWRRA
Trigger: AGCCCTCCGCCAGCAGATGCAGACCCAGAATCTCTC...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATTTGGGGTATGTTCAGTaGAGGGTGAGGGGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNLGYVQ*RVRGAK
Trigger: CTTAGCTCCCCTCACCCTGCACTGAACATACCCCAA...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATATACAACCCCGGGGTaGAGGGAGGTGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAYTTPG*REVPSG
Trigger: CCCAGATGGCACCTCCCTGCACCCCGGGGTTGTATA...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTGGCTTAACTCCCTCTaGTGTTACTTGGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: VLAGCGPRWLTANLAGANWLNSL*CYLAWS
Trigger: GCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCA...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCACGTCTGGCTGCTGGGTaGAGAGTGCTTCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PNSYGLTPSAVTWHGAYPRLAAG*RVLLWS
Trigger: AGACCAGAGAAGCACTCTCCACCCAGCAGCCAGACG...TGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATCCTGCAGGGCATAAATaGGTTGATTTGGAACCGGTG +
Preference number: 4 (lower is better)
Translates to: VLAGCGPRWLTANLAGANPAGHK*VDLEPV
Trigger: CACCGGTTCCAAATCAACCCATTTATGCCCTGCAGG...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAGTCTAGAATAGTGACGGGTTCCGAGGGGGTGCCCCAGTaGACTGTTCTGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: KVQRAPRMPGKSRIVTGSEGVPQ*TVLVMS
Trigger: AGACATCACCAGAACAGTCCACTGGGGCACCCCCTC...GGAACCCGTCACTATTCTAGACTTCCCTGGCATTCGAGGAGCCCTTTGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAGTCTAGAATAGTGACGGGTTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGGGGGCATTGCTCTCTTaGGGTTTTGTTTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: KSRIVTGSGCPSLFSNLWGALLS*GFVWRE
Trigger: CTCCCGCCAAACAAAACCCCAAGAGAGCAATGCCCC...CCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAACCCGTCACTATTCTAGACTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCAGGGTGGGAACAGCTCTaGCTATGCCCAACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EGASKNVGGFNSIVAVAAGWEQL*LCPTGG
Trigger: ACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACCC...TGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCTGGCTTTCCTATCTCGGGGCCTGGGATTAGGGGCCCAGGGTGTGGTATACAAACAGCCAAATTCCTATaGCTTAACTCCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGFPISGPGIRGPGCGIQTAKFL*LNSLCC
Trigger: ACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGT...TTGTATACCACACCCTGGGCCCCTAATCCCAGGCCCCGAGATAGGAAAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGGCAGTCGGGACCTTTTaGTGCTTCTGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVAVGTF*CFCIWL
Trigger: AAGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGC...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACAGCCCTGCTGGGTGGAGAGTaGTTCTCTGGTCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVGSYSRVPHRIPSYSTALLGGE*FSGLLF
Trigger: AAACAAAAGACCAGAGAAGCACTCTCCACCCAGCAG...GGCTGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTTGTCGGTCCAGACAGCTaGTTTCTTCATAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: QVANGQFGRSKFFSPQWVVGPDS*FLHSHH
Trigger: GTGGTGACTATGAAGAAAGCAGCTGTCTGGACCGAC...AACCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp CACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATATGGAGCTCCCAGTTaGAGTCCATCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HCPHKVKGHPRMWEDLTAYGAPS*SPSAAQ
Trigger: CTGAGCGGCAGATGGACTGCAACTGGGAGCTCCATA...TGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTAGAACTCATCCACTGTaGCTTTGGGCACGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPRWLTANLAGANSSHHSRTHPL*LWARSS
Trigger: AGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCT...ACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTACATCTGAGGACAGCTTaGGGTTCAGCTCCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLHLRTA*GSAPWS
Trigger: CGACCAAGGAGCTGAACCGCAAGCTGTCCTCAGATG...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCAACAGGAAGTTGCCAATaGCGTGGCCTGTCCCATGAC +
Preference number: 4 (lower is better)
Translates to: EGASKNVGGFNSIVAVAATGSCQ*RGLSHD
Trigger: GTCATGGGACAGGCCACGGCATTGGCAACTTCCTGT...TGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTATTCAGGTACTGGAGATaGTCGGGAGACAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLFRYWR*SGDSRL
Trigger: CAGCCTGCTGTCTCCCGAGCATCTCCAGTACCTGAA...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTGTGACGGGTTCCGGCTaGCCAAGTTTGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GASKNVGGFNSIVAVAALVTGSG*PSLFSN
Trigger: GTTGGAGAACAAACTTGGGCAGCCGGAACCCGTCAC...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp AGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGAGTGAAAGAGCTGGAATaGTGGCTCATCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RNQTLSTQGEGASKNVGGVKELE*WLIWPH
Trigger: ATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCAC...TCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATTCTCCCAGGTGTCAATaGACAAGAGGAAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNSPRCQ*TRGRGQ
Trigger: TTGACCCCTTCCTCTTGTCCATTGACACCTGGGAGA...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AGGTGGGCTCAGGGACTCTGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGTGTTCTTCACTGCCTTaGTCATCATCACTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RWAQGLCMLLKGERAGMLCSSLP*SSSLGS
Trigger: ACTCCCCAGTGATGATGACCAAGGCAGTGAAGAACA...CAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAGGACTGGAATCCCACTaGCCACTCATGCACACACAG +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLGLESH*PLMHTQ
Trigger: CTGTGTGTGCATGAGTGGCCAGTGGGATTCCAGTCC...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGGCGATGTTGTTGGACTaGAATCCCACTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVAMLLD*NPTGHS
Trigger: TGAGTGGCCAGTGGGATTCCAGTCCAACAACATCGC...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp ACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGTTTAGGAATGATGGGAGCTCCCTGGGTACTTaGTCTTTGCTTCTACCACGA +
Preference number: 4 (lower is better)
Translates to: TPSAVTWHGAYPGFRNDGSSLGT*SLLLPR
Trigger: TCGTGGTAGAAGCAAAGACCAAGTACCCAGGGAGCT...CCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAGAGCTGGAATGCTGGCTCATCTGGCCCCATCAACTCCCAACCAAATTTGTGTCACTCCAGCCAAGGATaGCAAGGGTGGAGACCACTA +
Preference number: 4 (lower is better)
Translates to: KSWNAGSSGPINSQPNLCHSSQG*QGWRPL
Trigger: TAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTG...ACACAAATTTGGTTGGGAGTTGATGGGGCCAGATGAGCCAGCATTCCAGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp AAGTCTAGAATAGTGACGGGTTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTCCCATGACCATAATTaGGACCAGCATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: KSRIVTGSGCPSLFSNLWSHDHN*DQHPTR
Trigger: CCTTGTGGGATGCTGGTCTCAATTATGGTCATGGGA...CCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAACCCGTCACTATTCTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGCATGTTGCTGAAGGGTaGAAGAGCTGGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRHVAEG*KSWNAG
Trigger: GCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATG...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp TTCCGGCTGCCCAAGTTTGTTCTCCAACCTCTGGTAGGGTCATATTCCAGAGTGGACTCTGCATGTTGCTaGAGGGTGAAAGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FRLPKFVLQPLVGSYSRVDSACC*RVKELE
Trigger: TTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTC...CACTCTGGAATATGACCCTACCAGAGGTTGGAGAACAAACTTGGGCAGCCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGGCTCATCTGGCCCCATCACCAGATACTTTCTCCTaGCAAGTGCTCCCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: CMLLKGERAGMLAHLAPSPDTFS*QVLPVN
Trigger: ATTCACAGGGAGCACTTGGCAGGAGAAAGTATCTGG...TGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAGAACAGCTCTGGCTATaGCCAACAGGTGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLEQLWL*PTGGDR
Trigger: CCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTC...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp GCCCCATCAACTCCCAACCAAATTTGTGTGTCCTTAGGCAAAGCCCACCCCCTGCATACATGGTATAGCTaGTCCCAATCCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: APSTPNQICVSLGKAHPLHTWYS*SQSRSS
Trigger: TGAGGATCTGGATTGGGACCAGCTATACCATGTATG...CAGGGGGTGGGCTTTGCCTAAGGACACACAAATTTGGTTGGGAGTTGATGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAGGTCAGGTAGCTCCCTaGGTACTTGGTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLGQVAP*VLGLCF
Trigger: GAAGCAAAGACCAAGTACCCAGGGAGCTACCTGACC...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGCCACCTTCTCCCGGATaGTCTGGTAGTAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRPPSPG*SGSSDS
Trigger: TGAATCGCTACTACCAGACCATCCGGGAGAAGGTGG...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGATGTACTCGTTCATGTaGGCATCTGTGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPRMYSFM*ASVPGM
Trigger: CATCCCAGGCACAGATGCTCACATGAACGAGTACAT...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR TCA 90 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCACCACAAGATTGGTTGTaGTGGACACCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PNSYGLTPSAVTWHGAYPPQDWL*WTPAVC
Trigger: ACAGACAGCTGGTGTCCATCACAACCAATCTTGTGG...TGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTCTTCATAGTCACCACTaGAGTTCCTGCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GASKNVGGFNSIVAVAALLHSHH*SSCRPC
Trigger: ACAGGGTCTGCAGGAACTGCAGTGGTGACTATGAAG...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCACACACATGGGGCCTGTaGAACTGGAGTTCAGATAGC +
Preference number: 4 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAHTWGL*NWSSDS
Trigger: GCTATCTGAACTCCAGTTGCACAGGCCCCATGTGTG...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCAATGAGTAGGCCTGGATaGTGTCACGAACTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EGASKNVGGFNSIVAVAAMSRPG*CHELGC
Trigger: ACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCAT...TGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATGGGCTCAGGGACTCTaGATGTTGCTGAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAWAQGL*MLLKGE
Trigger: TTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCA...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGTGGGGCCTGTGCAACTaGAGTTCAGATAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWWGLCN*SSDSSR
Trigger: CCTTGAGCTATCTGAACTCCAGTTGCACAGGCCCCA...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCACTTGGTCATCATCACTaGGGAGTAGGTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HCPHKVKGHPRMWEDLTALGHHH*GVGVCH
Trigger: GTGACAGACACCTACTCCCCAGTGATGATGACCAAG...TGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CCTCTGGTAGGGTCATATTCCAGAGTGCCTCACCGCATTCCCTCTTACTCCACAAGATGGTTTCAAAACTaGGTCCGGAGGAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: PLVGSYSRVPHRIPSYSTRWFQN*VRRRTV
Trigger: AACAGTTCTCCTCCGGACCCAGTTTTGAAACCATCT...TGTGGAGTAAGAGGGAATGCGGTGAGGCACTCTGGAATATGACCCTACCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp CACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCAGCTGTGGCTGCACTTTaGAAAGTTCAAAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HCPHKVKGHPRMWEDLTAAVAAL*KVQRAP
Trigger: AGGAGCCCTTTGAACTTTCCAAAGTGCAGCCACAGC...TGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGCTTGCTGTTCTTCACTaGCTTGGTCATCATCACTGG +
Preference number: 4 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWLAVLH*LGHHHW
Trigger: CCAGTGATGATGACCAAGGCAGTGAAGAACAGCAAG...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR GCA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTCATTGTAGCTGTGGCTaGACTTTGGAAAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GASKNVGGFNSIVAVAALHCSCG*TLESSK
Trigger: CTTTGAACTTTCCAAAGTGCAGCCACAGCTACAATG...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCAGGGCATCCAAGAATGTaGGAGGATTTAACAGCATTG +
Preference number: 4 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAGHPRM*EDLTAL
Trigger: CAATGCTGTTAAATCCTCCCACATTCTTGGATGCCC...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp ACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTATTCCTGTCTGTAAAATaGAGAAACCAGACACTGTCC +
Preference number: 4 (lower is better)
Translates to: TRHCPHKVKGHPRMWEDLFLSVK*RNQTLS
Trigger: GGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA...TAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGTTCTTCTCACCACAGTaGGTTCAGAGAATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWFFSPQ*VQRMRR
Trigger: TCTCCTCATTCTCTGAACCCACTGTGGTGAGAAGAA...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CCA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGTCACGAGTTTCTCCTTaGGTATCATTTCATAGATCC +
Preference number: 4 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWSRVSP*VSFHRS
Trigger: GGATCTATGAAATGATACCCAAGGAGAAACTCGTGA...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp CAGGCACAAGCACAGAGGAGGACCAGCCAGGGGCAGCAGCCCCAGTaGGCCCGGGCCATAGGGTCTCCAGATGCCGGCGCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: QAQAQRRTSQGQQPQ*ARAIGSPDAGAGWM
Trigger: CATCCACCCAGCGCCGGCATCTGGAGACCCTATGGCCCGGGCTCACTGGGGCTGCTGCCCCTGGCTGGTCCTCCTCTGTGCTTGTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS TCA 90 bp GAGGCGGTGTCTGGGGCCCTGGCGGCCAGGGGCTCTGTGTGCTGTTaGAGCCACTCGAACTCCTCTAGTAGCTGGCGCCTCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EAVSGALAARGSVCC*SHSNSSSSWRLCSS
Trigger: AGAGCTGCAGAGGCGCCAGCTACTAGAGGAGTTCGAGTGGCTTCAACAGCACACAGAGCCCCTGGCCGCCAGGGCCCCAGACACCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp CGGCCTCTTCCTTCAGGCCTTTCCTGGGCTCGAGCAGACAGAGGGTaGGGGCTGGCGTCAAGAAGGAGGCGTCTGGCTGCTGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RPLPSGLSWARADRG*GLASRRRRLAAGWR
Trigger: TCTCCACCCAGCAGCCAGACGCCTCCTTCTTGACGCCAGCCCCCACCCTCTGTCTGCTCGAGCCCAGGAAAGGCCTGAAGGAAGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS CCA 90 bp GGAGAGTCTGGAGCCTCTAGACACTCCAGCCAAGGATGGCAAGGGTaGAGACCACTAACACAGAGGCCCAGGAGGCGGTGTCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GESGASRHSSQGWQG*RPLTQRPRRRCLGP
Trigger: GGGCCCCAGACACCGCCTCCTGGGCCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTGTCTAGAGGCTCCAGACTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp GGTGGGAACAGCTCTGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCCGCACGTGGCTGGCCTaGAGGAGGGCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GGNSSGYAQQVVIGLGSPRTWLA*RRACSL
Trigger: CAAGGAGCAGGCCCTCCTCAAGGCCAGCCACGTGCG...GGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCAGAGCTGTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCTCACTGGCTCGAAGGTaGAAGAGCCAGGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: WLCPTGGDRFGLSRDHGTSLARR*KSQAVS
Trigger: GGAGACGGCCTGGCTCTTCAACCTTCGAGCCAGTGA...GGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp GCCGTCTCCTCAAGCGCCGACAGAAGGACGGCAGTCGGGACCTTTTaGTGCTTCTGCATCTGGCTTCGGACGCCAGATACTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AVSSSADRRTAVGTF*CFCIWLRTPDTFSC
Trigger: GCAGGAGAAAGTATCTGGCGTCCGAAGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGCCGTCCTTCTGTCGGCGCTTGAGGAGACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp CTAGTAGCTGGCGCCTCTGCAGCTCTGGACCCACCTTCTCCCGGATaGTCTGGTAGTAGCGATTCAGGTACTGGAGATGCTCGGGAGACA +
Preference number: 5 (lower is better)
Translates to: LVAGASAALDPPSPG*SGSSDSGTGDARET
Trigger: TGTCTCCCGAGCATCTCCAGTACCTGAATCGCTACTACCAGACCATCCGGGAGAAGGTGGGTCCAGAGCTGCAGAGGCGCCAGCTACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp GGGTTAACAGGAGAGTCTGGAGCCTCTAGACACTCCAGCCAAGGATaGCAAGGGTGGAGACCACTAACACAGAGGCCCAGGAGGCGGTGT +
Preference number: 5 (lower is better)
Translates to: GLTGESGASRHSSQG*QGWRPLTQRPRRRC
Trigger: ACACCGCCTCCTGGGCCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTGTCTAGAGGCTCCAGACTCTCCTGTTAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGCAGGTGGTGATAGGTTaGGGCTCTCCCGGGACCATG +
Preference number: 5 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGQVVIG*GSPGTM
Trigger: CATGGTCCCGGGAGAGCCCAAACCTATCACCACCTG...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGAGCTGTGGCTGCACTTaGGAAAGTTCAAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWSCGCT*ESSKGS
Trigger: GGAGCCCTTTGAACTTTCCAAAGTGCAGCCACAGCT...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGGGGCTCTGTGTGCTGTaGAAGCCACTCGAACTCCTC +
Preference number: 5 (lower is better)
Translates to: PRWLTANLAGANSSHHSGGLCVL*KPLELL
Trigger: GAGGAGTTCGAGTGGCTTCAACAGCACACAGAGCCC...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TGGCTATGCCCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCAGGGACTCTGCATGTaGCTGAAGGGTGAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: WLCPTGGDRFGLSRDHGTQGLCM*LKGERA
Trigger: AGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTG...GGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGGGCATAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 90 bp CACGTGGCTGGCCTTGAGGAGGGCCTGCTCCTTGCTGTTCTTCACTaGCTTGGTCATCATCACTGGGGAGTAGGTGTCTGTCACGAGTTT +
Preference number: 5 (lower is better)
Translates to: HVAGLEEGLLLAVLH*LGHHHWGVGVCHEF
Trigger: AAACTCGTGACAGACACCTACTCCCCAGTGATGATGACCAAGGCAGTGAAGAACAGCAAGGAGCAGGCCCTCCTCAAGGCCAGCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 90 bp CTCGGAACTTGTCCACGATCTCTGCCCCCGAGAACTCATCCACTGTaGCTTTGGGCACGTTCTTCTCCAGCCAGACCAAGTACCGGATCA +
Preference number: 5 (lower is better)
Translates to: LGTCPRSLPPRTHPL*LWARSSPARPSTGS
Trigger: TGATCCGGTACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGGGGCAGAGATCGTGGACAAGTTCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp ACTTGTCCACGATCTCTGCCCCCGAGAACTCATCCACTGTGCCTTTaGGCACGTTCTTCTCCAGCCAGACCAAGTACCGGATCACAGCCA +
Preference number: 5 (lower is better)
Translates to: TCPRSLPPRTHPLCL*ARSSPARPSTGSQP
Trigger: TGGCTGTGATCCGGTACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGGGGCAGAGATCGTGGACAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTCTTCTCACCACAGTGGGTCATCCACTGTGCCTTaGGGCACGTTCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRWLTANLAGANSSHHSGSSTVP*GTFFSS
Trigger: GCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGA...CCCACTGTGGTGAGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 90 bp CTGCCGCTCAGCCTGAGTCCAGTAGCGACTGTCGGTCCAGACAGCTaGTTTCTTCATAGTCACCACTGCAGTTCCTGCAGACCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LPLSLSPVATVGPDS*FLHSHHCSSCRPCK
Trigger: TTTACAGGGTCTGCAGGAACTGCAGTGGTGACTATGAAGAAAGCAGCTGTCTGGACCGACAGTCGCTACTGGACTCAGGCTGAGCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS-3UTR CAA 90 bp AGGTGGGCTCAGGGACTCTGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGTTATGGAGCTCCCAGTaGCAGTCCATCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RWAQGLCMLLKGERAGMLLWSSQ*QSICRS
Trigger: TGAGCGGCAGATGGACTGCAACTGGGAGCTCCATAA...CAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TGTGTTCCTGGGGCCTGGGACCTTCTCCATAGGTCTTGGAGAAGGAGGATGAATTGCACACACAGGAAGTaGCCAATGCCGTGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: CVPGAWDLLHRSWRRRMNCTHRK*PMPWPV
Trigger: GACAGGCCACGGCATTGGCAACTTCCTGTGTGTGCA...ATTCATCCTCCTTCTCCAAGACCTATGGAGAAGGTCCCAGGCCCCAGGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGCTGGGTACTTGGTCTTaGCTTCTACCACGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGLGTWS*LLPREP
Trigger: TGGCTCTCGTGGTAGAAGCAAAGACCAAGTACCCAG...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CCAACAGGTGGTGATAGGTTTGGGCTCTCCCGGGACCATGGCACCCTTGGGTGGAACTCCCAACCAAATTaGTGTGTCCTTAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: PTGGDRFGLSRDHGTLGWNSQPN*CVLRQS
Trigger: GCTTTGCCTAAGGACACACAAATTTGGTTGGGAGTT...CCACCCAAGGGTGCCATGGTCCCGGGAGAGCCCAAACCTATCACCACCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp ACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGTTTAGGAATGATGGGCTCTGGTCTTTTGTTTaGGAGGGCTCTGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TPSAVTWHGAYPGFRNDGLWSFV*EGSGSQ
Trigger: CTGGCTCCCAGAGCCCTCCAAAACAAAAGACCAGAG...CCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AGGTGGGCTCAGGGACTCTGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGACGCCTCTCGTCATGTaGGCCGATGTACTCGTTCAT +
Preference number: 5 (lower is better)
Translates to: RWAQGLCMLLKGERAGMLTPLVM*ADVLVH
Trigger: ATGAACGAGTACATCGGCCAACATGACGAGAGGCGT...CAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCAGAGTCCCTGAGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAGGTTTCTAGGCAATGGGCCAGCAGGGGCTCTTGGGGTATGTTCAGTGCAGGGCATAAATGGGTTGATTaGGAACCGGTGGCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KVSRQWASRGSWGMFSAGHKWVD*EPVASL
Trigger: CAGAGAGGCCACCGGTTCCAAATCAACCCATTTATG...CCCTGCACTGAACATACCCCAAGAGCCCCTGCTGGCCCATTGCCTAGAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCAGGGACCATGGCACCCTaGGGTGGTAGGGGCATTGCT +
Preference number: 5 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAGTMAP*GGRGIA
Trigger: AGCAATGCCCCTACCACCCAAGGGTGCCATGGTCCC...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp CTCCTGCAGGGCATAAATGGGTTGATTTGGAACCGGTGGCCTCTCTaGTCCCCATACCAGGTCCACAAGATTGGTTGTGATGGACACCAG +
Preference number: 5 (lower is better)
Translates to: LLQGINGLIWNRWPL*SPYQVHKIGCDGHQ
Trigger: CTGGTGTCCATCACAACCAATCTTGTGGACCTGGTATGGGGATCAGAGAGGCCACCGGTTCCAAATCAACCCATTTATGCCCTGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS-3UTR CAA 90 bp TGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGGCTCATCTGGCCCCATCAACCAGGTCCACAAGATaGGTTGTGATGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: CMLLKGERAGMLAHLAPSTRSTR*VVMDTS
Trigger: GCTGGTGTCCATCACAACCAATCTTGTGGACCTGGT...TGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAGTCTAGAATAGTGACGGGTTCCTCTTCTCCTCGGAACTaGTCCACGATCTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: KVQRAPRMPGKSRIVTGSSSPRN*STISAP
Trigger: GGGGGCAGAGATCGTGGACAAGTTCCGAGGAGAAGA...GGAACCCGTCACTATTCTAGACTTCCCTGGCATTCGAGGAGCCCTTTGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCATCCCTCTGCTGTTACTaGGCATGGAGCCTACCCAGG +
Preference number: 5 (lower is better)
Translates to: PNSYGLTPSAVTWHGAYPSLCCY*AWSLPR
Trigger: CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGA...TGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp GTCTTAGCAGGATGTGGACCCAGGTGGCTAACGGCCAATTTGGCCGGAGCAAATTGGCTAACGGCCAATTaGGCCGGAGCAAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: VLAGCGPRWLTANLAGANWLTAN*AGANSS
Trigger: AGAAGAATTTGCTCCGGCCAAATTGGCCGTTAGCCA...ATTTGCTCCGGCCAAATTGGCCGTTAGCCACCTGGGTCCACATCCTGCTAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp GGATGCTGTCACGAACTTGGCTGTAATCCTCGATTTGCACACACATaGGGCCTGTGCAACTGGAGTTCAGATAGCTCAAGGTTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: GCCHELGCNPRFAHT*GLCNWSSDSSRFRS
Trigger: GCTCCGAAACCTTGAGCTATCTGAACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCGAGGATTACAGCCAAGTTCGTGACAGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TGCATGTTGCTGAAGGGTGAAAGAGCTGGAATGCTGGCTCATCTGGCCCCATCATGCTTCTCTGGTCTTTaGTTTTGGAGGGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: CMLLKGERAGMLAHLAPSCFSGL*FWRALG
Trigger: TCCCAGAGCCCTCCAAAACAAAAGACCAGAGAAGCA...TGATGGGGCCAGATGAGCCAGCATTCCAGCTCTTTCACCCTTCAGCAACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AGAAACCAGACACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGACAGGGCATAAATGGGTaGATTTGGAACCGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RNQTLSTQGEGASKNVGGQGING*IWNRWP
Trigger: AGGCCACCGGTTCCAAATCAACCCATTTATGCCCTG...TCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTTCATCTGAGGACAGCTaGCGGTTCAGCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GASKNVGGFNSIVAVAALSSEDS*RFSSLV
Trigger: GACCAAGGAGCTGAACCGCAAGCTGTCCTCAGATGA...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp AGACAGCAGGCTGACATCGATGAGGTTCCGGTCATAGGGCACAAATaGTACCACTTCAAAGGTCAGGTAGCTCCCTGGGTACTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: RQQADIDEVPVIGHK*YHFKGQVAPWVLGL
Trigger: AAGACCAAGTACCCAGGGAGCTACCTGACCTTTGAAGTGGTATCATTTGTGCCCTATGACCGGAACCTCATCGATGTCAGCCTGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 90 bp TGGTCCCAATCCAGATCCTCACATCTCCCAATGAGTAGGCCTGGATaGTGTCACGAACTTGGCTGTAATCCTCGATTTGCACACACATGG +
Preference number: 5 (lower is better)
Translates to: WSQSRSSHLPMSRPG*CHELGCNPRFAHTW
Trigger: CCATGTGTGTGCAAATCGAGGATTACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGATTGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCAGGCAGTCGGGACCTTTaGATGCTTCTGCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAGSRDL*MLLHLA
Trigger: AGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGCC...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp CACTGTCCACACAAGGTGAAGGGGCATCCAAGAATGTGGGAGGATTTAACAGCAGCTGTAATCCTCGATTaGCACACACATGGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: HCPHKVKGHPRMWEDLTAAVILD*HTHGAC
Trigger: ACAGGCCCCATGTGTGTGCAAATCGAGGATTACAGC...TGCTGTTAAATCCTCCCACATTCTTGGATGCCCCTTCACCTTGTGTGGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TACTCCACAGCCAAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGGCCATAGCGATGTTGTaGGACTGGAATCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: YSTAKFLWLNSLCCYLAWAIAML*DWNPTG
Trigger: GCCAGTGGGATTCCAGTCCAACAACATCGCTATGGC...CCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTTGGCTGTGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp CGTTGCTACAAGTTGGGAAGGAAACTGGGCTTACTGAATCACCTGTaGATGCCTCCTGCAGGGCATAAATGGGTTGATTTGGAACCGGTG +
Preference number: 5 (lower is better)
Translates to: RCYKLGRKLGLLNHL*MPPAGHKWVDLEPV
Trigger: CACCGGTTCCAAATCAACCCATTTATGCCCTGCAGGAGGCATTCACAGGTGATTCAGTAAGCCCAGTTTCCTTCCCAACTTGTAGCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681234.1
CDS GCA 90 bp CTAAGGTTTGCAAACCACTGCTTTGGTACCTCTGATGATGAAGTTTaGCACCTACGGAATAGCAGCCGGGACCTGCGTTGCTACAAGTTG +
Preference number: 5 (lower is better)
Translates to: LRFANHCFGTSDDEV*HLRNSSRDLRCYKL
Trigger: CAACTTGTAGCAACGCAGGTCCCGGCTGCTATTCCGTAGGTGGCAAACTTCATCATCAGAGGTACCAAAGCAGTGGTTTGCAAACCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681234.1
CDS-3UTR CAA 90 bp ACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGTTTAGGAATGATGGGAGTGACATTGTGGTATaGACCACAGTAACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: TPSAVTWHGAYPGFRNDGSDIVV*TTVTGR
Trigger: CCTTCCAGTTACTGTGGTCAATACCACAATGTCACT...CCCATCATTCCTAAACCCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAGAGCTGGAATGCTGGCTCATCTGGCCCCATCAACTCCCAACCAAATTTGTGTCTGTCTGTTAGAGCCTaGGAGGGCCAGATCATAACT +
Preference number: 5 (lower is better)
Translates to: KSWNAGSSGPINSQPNLCLSVRA*EGQIIT
Trigger: AGTTATGATCTGGCCCTCCAAGGCTCTAACAGACAG...ACACAAATTTGGTTGGGAGTTGATGGGGCCAGATGAGCCAGCATTCCAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp GGGGCATCCAAGAATGTGGGAGGATTTAACAGCATTGTAGCTGTGGCTGCACTTTTGGCCATAGCGATGTaGTTGGACTGGAATCCCACT +
Preference number: 5 (lower is better)
Translates to: GASKNVGGFNSIVAVAALLAIAM*LDWNPT
Trigger: AGTGGGATTCCAGTCCAACAACATCGCTATGGCCAA...AAGTGCAGCCACAGCTACAATGCTGTTAAATCCTCCCACATTCTTGGATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAATTCCTATGGCTTAACTCCCTCTGCTGTTACTTGGCATGGAGCCTACCCAGGGAAGTGAACATGCCCTaGGCCATAGCGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: KFLWLNSLCCYLAWSLPREVNMP*AIAMLL
Trigger: CAACAACATCGCTATGGCCAAGGGCATGTTCACTTC...CCTGGGTAGGCTCCATGCCAAGTAACAGCAGAGGGAGTTAAGCCATAGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 90 bp ATACATGGTATAGCTGGTCCCAATCCAGATCCTCACATCTCCCAATaGGTAGGCCTGGATGCTGTCACGAACTTGGCTGTAATCCTCGAT +
Preference number: 5 (lower is better)
Translates to: IHGIAGPNPDPHISQ*VGLDAVTNLAVILD
Trigger: ATCGAGGATTACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGATTGGGACCAGCTATACCATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp AAAGTTCAAAGGGCTCCTCGAATGCCAGGGAAGTCTAGAATAGTGACGGGTTCCGATGCTGTCACGAACTaGGCTGTAATCCTCGATTTG +
Preference number: 5 (lower is better)
Translates to: KVQRAPRMPGKSRIVTGSDAVTN*AVILDL
Trigger: CAAATCGAGGATTACAGCCAAGTTCGTGACAGCATC...GGAACCCGTCACTATTCTAGACTTCCCTGGCATTCGAGGAGCCCTTTGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 90 bp GTTTCTCCTTGGGTATCATTTCATAGATCCCATACATGGTATAGCTaGTCCCAATCCAGATCCTCACATCTCCCAATGAGTAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VSPWVSFHRSHTWYS*SQSRSSHLPMSRPG
Trigger: TCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGATTGGGACCAGCTATACCATGTATGGGATCTATGAAATGATACCCAAGGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS-3UTR CAA 90 bp TTCCTGTCTGTAAAATGGAGAAACCAGACACTGTCCACACAAGGTGAAGGGGCAGAGCTAAAGCGACTCTaGTTTGCAAACAACCTAATA +
Preference number: 5 (lower is better)
Translates to: FLSVKWRNQTLSTQGEGAELKRL*FANNLI
Trigger: TATTAGGTTGTTTGCAAACAAGAGTCGCTTTAGCTC...TGCCCCTTCACCTTGTGTGGACAGTGTCTGGTTTCTCCATTTTACAGACAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp GCAGCCCCAGTGAGCCCGGGCCATAGGGTCTCCAGATaGCGGCGCTGGGTGGATGGAGGGACAAGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: AAPVSPGHRVSR*RRWVDGGTRER
Trigger: TCTCTCCCTTGTCCCTCCATCCACCCAGCGCCGGCATCTGGAGACCCTATGGCCCGGGCTCACTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS CCA 72 bp GCCTTTCCTGGGCTCGAGCAGACAGAGGGTGGGGGCTaGCGTCAAGAAGGAGGCGTCTGGCTGCTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: AFPGLEQTEGGG*RQEGGVWLLGG
Trigger: TCCACCCAGCAGCCAGACGCCTCCTTCTTGACGCCAGCCCCCACCCTCTGTCTGCTCGAGCCCAGGAAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS CCA 72 bp GGAGCCTCTAGACACTCCAGCCAAGGATGGCAAGGGTaGAGACCACTAACACAGAGGCCCAGGAGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: GASRHSSQGWQG*RPLTQRPRRRC
Trigger: ACACCGCCTCCTGGGCCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTGTCTAGAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 72 bp GGAGAGTCTGGAGCCTCTAGACACTCCAGCCAAGGATaGCAAGGGTGGAGACCACTAACACAGAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GESGASRHSSQG*QGWRPLTQRPR
Trigger: CCTGGGCCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTGTCTAGAGGCTCCAGACTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 90 bp GGCCGTCTCCTCAAGCGCCGACAGAAGGACGGCAGTCGGGACCTTTaGATGCTTCTGCATCTGGCTTCGGACGCCAGATACTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GRLLKRRQKDGSRDL*MLLHLASDARYFLL
Trigger: CAGGAGAAAGTATCTGGCGTCCGAAGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGCCGTCCTTCTGTCGGCGCTTGAGGAGACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 72 bp CGATCTCTGCCCCCGAGAACTCATCCACTGTGCCTTTaGGCACGTTCTTCTCCAGCCAGACCAAGTACCGGA +
Preference number: 6 (lower is better)
Translates to: RSLPPRTHPLCL*ARSSPARPSTG
Trigger: TCCGGTACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGGGGCAGAGATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 72 bp CTCAAGCGCCGACAGAAGGACGGCAGTCGGGACCTTTaGATGCTTCTGCATCTGGCTTCGGACGCCAGATAC +
Preference number: 6 (lower is better)
Translates to: LKRRQKDGSRDL*MLLHLASDARY
Trigger: GTATCTGGCGTCCGAAGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGCCGTCCTTCTGTCGGCGCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 90 bp AACTTGTCCACGATCTCTGCCCCCGAGAACTCATCCACTGTGCCTTaGGGCACGTTCTTCTCCAGCCAGACCAAGTACCGGATCACAGCC +
Preference number: 6 (lower is better)
Translates to: NLSTISAPENSSTVP*GTFFSSQTKYRITA
Trigger: GGCTGTGATCCGGTACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGGGGCAGAGATCGTGGACAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 72 bp GTTCATGTGAGCATCTGTGCCTGGGATGATGTAGGCTaGGAGATTCTGGGTCTGCATCTGCTGGCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: VHVSICAWDDVG*EILGLHLLAEG
Trigger: GCCCTCCGCCAGCAGATGCAGACCCAGAATCTCTCAGCCTACATCATCCCAGGCACAGATGCTCACATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS TCA 72 bp TCAAGCGCCGACAGAAGGACGGCAGTCGGGACCTTTTaGTGCTTCTGCATCTGGCTTCGGACGCCAGATACT +
Preference number: 6 (lower is better)
Translates to: SSADRRTAVGTF*CFCIWLRTPDT
Trigger: AGTATCTGGCGTCCGAAGCCAGATGCAGAAGCATCAAAAGGTCCCGACTGCCGTCCTTCTGTCGGCGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp TTCTGCATCTGGCTTCGGACGCCAGATACTTTCTCCTaGCAAGTGCTCCCTGTGAATGCCTCCTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FCIWLRTPDTFS*QVLPVNASCRA
Trigger: TGCCCTGCAGGAGGCATTCACAGGGAGCACTTGGCAGGAGAAAGTATCTGGCGTCCGAAGCCAGATGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp GGCCTTGAGGAGGGCCTGCTCCTTGCTGTTCTTCACTaGCTTGGTCATCATCACTGGGGAGTAGGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: GLEEGLLLAVLH*LGHHHWGVGVC
Trigger: ACAGACACCTACTCCCCAGTGATGATGACCAAGGCAGTGAAGAACAGCAAGGAGCAGGCCCTCCTCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp TGTCCACGATCTCTGCCCCCGAGAACTCATCCACTGTaGCTTTGGGCACGTTCTTCTCCAGCCAGACCAAGT +
Preference number: 6 (lower is better)
Translates to: CPRSLPPRTHPL*LWARSSPARPS
Trigger: ACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGGGGCAGAGATCGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 90 bp TTTGGAACCGGTGGCCTCTCTGATCCCCATACCAGGTCCACAAGATaGGTTGTGATGGACACCAGCTGTCTGTTAGAGCCTTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: FGTGGLSDPHTRSTR*VVMDTSCLLEPWRA
Trigger: GGCCCTCCAAGGCTCTAACAGACAGCTGGTGTCCATCACAACCAATCTTGTGGACCTGGTATGGGGATCAGAGAGGCCACCGGTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS GCA 72 bp AGCCTGAGTCCAGTAGCGACTGTCGGTCCAGACAGCTaGTTTCTTCATAGTCACCACTGCAGTTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SLSPVATVGPDS*FLHSHHCSSCR
Trigger: TCTGCAGGAACTGCAGTGGTGACTATGAAGAAAGCAGCTGTCTGGACCGACAGTCGCTACTGGACTCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS GCA 72 bp GCAAACCACTGCTTTGGTACCTCTGATGATGAAGTTTaGCACCTACGGAATAGCAGCCGGGACCTGCGTTGC +
Preference number: 6 (lower is better)
Translates to: ANHCFGTSDDEV*HLRNSSRDLRC
Trigger: GCAACGCAGGTCCCGGCTGCTATTCCGTAGGTGGCAAACTTCATCATCAGAGGTACCAAAGCAGTGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681234.1
CDS CAA 72 bp GGTGGCCTCTCTGATCCCCATACCAGGTCCACAAGATaGGTTGTGATGGACACCAGCTGTCTGTTAGAGCCT +
Preference number: 6 (lower is better)
Translates to: GGLSDPHTRSTR*VVMDTSCLLEP
Trigger: AGGCTCTAACAGACAGCTGGTGTCCATCACAACCAATCTTGTGGACCTGGTATGGGGATCAGAGAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS GCA 72 bp GGCTGTAATCCTCGATTTGCACACACATGGGGCCTGTaGAACTGGAGTTCAGATAGCTCAAGGTTTCGGAGC +
Preference number: 6 (lower is better)
Translates to: GCNPRFAHTWGL*NWSSDSSRFRS
Trigger: GCTCCGAAACCTTGAGCTATCTGAACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCGAGGATTACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp GTTTGCCACCTACGGAATAGCAGCCGGGACCTGCGTTaGTACAAGTTGGGAAGGAAACTGGGCTTACTGAAT +
Preference number: 6 (lower is better)
Translates to: VCHLRNSSRDLR*YKLGRKLGLLN
Trigger: ATTCAGTAAGCCCAGTTTCCTTCCCAACTTGTAGCAACGCAGGTCCCGGCTGCTATTCCGTAGGTGGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681234.1
CDS CAA 72 bp TGTAAAGCCTGTAATCCACGCACGCCTCTCGTCATGTaGGCCGATGTACTCGTTCATGTGAGCATCTGTGCC +
Preference number: 6 (lower is better)
Translates to: CKACNPRTPLVM*ADVLVHVSICA
Trigger: GGCACAGATGCTCACATGAACGAGTACATCGGCCAACATGACGAGAGGCGTGCGTGGATTACAGGCTTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS CAA 72 bp CTGGATGCTGTCACGAACTTGGCTGTAATCCTCGATTaGCACACACATGGGGCCTGTGCAACTGGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: LDAVTNLAVILD*HTHGACATGVQ
Trigger: CTGAACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCGAGGATTACAGCCAAGTTCGTGACAGCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 90 bp GTCCACAAGATTGGTTGTGATGGACACCAGCTGTCTGTTAGAGCCTaGGAGGGCCAGATCATAACTCTCCCAGGTGTCAATGGACAAGAG +
Preference number: 6 (lower is better)
Translates to: VHKIGCDGHQLSVRA*EGQIITLPGVNGQE
Trigger: CTCTTGTCCATTGACACCTGGGAGAGTTATGATCTGGCCCTCCAAGGCTCTAACAGACAGCTGGTGTCCATCACAACCAATCTTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS TCA 72 bp ATTCTGGGTCTGCATCTGCTGGCGGAGGGCTGTGAGTaGCATTGTGGTATTGACCACAGTAACTGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: ILGLHLLAEGCE*HCGIDHSNWKV
Trigger: TACCTTCCAGTTACTGTGGTCAATACCACAATGTCACTCACAGCCCTCCGCCAGCAGATGCAGACCCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371105.7
ENST00000371106.4
ENST00000681234.1
CDS TCA 72 bp ATAGCTGGTCCCAATCCAGATCCTCACATCTCCCAATaGGTAGGCCTGGATGCTGTCACGAACTTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: IAGPNPDPHISQ*VGLDAVTNLAV
Trigger: TACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGATTGGGACCAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 72 bp GCTGACATCGATGAGGTTCCGGTCATAGGGCACAAATaGTACCACTTCAAAGGTCAGGTAGCTCCCTGGGTA +
Preference number: 6 (lower is better)
Translates to: ADIDEVPVIGHK*YHFKGQVAPWV
Trigger: TACCCAGGGAGCTACCTGACCTTTGAAGTGGTATCATTTGTGCCCTATGACCGGAACCTCATCGATGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CCA 72 bp CACGAACTTGGCTGTAATCCTCGATTTGCACACACATaGGGCCTGTGCAACTGGAGTTCAGATAGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: HELGCNPRFAHT*GLCNWSSDSSR
Trigger: CCTTGAGCTATCTGAACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCGAGGATTACAGCCAAGTTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS TCA 72 bp GGCATAAATGGGTTGATTTGGAACCGGTGGCCTCTCTaGTCCCCATACCAGGTCCACAAGATTGGTTGTGAT +
Preference number: 6 (lower is better)
Translates to: GINGLIWNRWPL*SPYQVHKIGCD
Trigger: ATCACAACCAATCTTGTGGACCTGGTATGGGGATCAGAGAGGCCACCGGTTCCAAATCAACCCATTTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS GCA 72 bp TCCAGATCCTCACATCTCCCAATGAGTAGGCCTGGATaGTGTCACGAACTTGGCTGTAATCCTCGATTTGCA +
Preference number: 6 (lower is better)
Translates to: SRSSHLPMSRPG*CHELGCNPRFA
Trigger: TGCAAATCGAGGATTACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS CAA 72 bp ATTGGTTGTGATGGACACCAGCTGTCTGTTAGAGCCTaGGAGGGCCAGATCATAACTCTCCCAGGTGTCAAT +
Preference number: 6 (lower is better)
Translates to: IGCDGHQLSVRA*EGQIITLPGVN
Trigger: ATTGACACCTGGGAGAGTTATGATCTGGCCCTCCAAGGCTCTAACAGACAGCTGGTGTCCATCACAACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371106.4
ENST00000681234.1
CDS CCA 72 bp TTATATCCTAGGGAAGCTGAGTCACCCTCGTTAGCATaGACAAATTCAGGGACTGAAGGAAGAGCATACCAA +
Preference number: 6 (lower is better)
Translates to: LYPREAESPSLA*TNSGTEGRAYQ
Trigger: TTGGTATGCTCTTCCTTCAGTCCCTGAATTTGTCCATGCTAACGAGGGTGACTCAGCTTCCCTAGGATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371105.7
CDS CCA 72 bp TGGGTATCATTTCATAGATCCCATACATGGTATAGCTaGTCCCAATCCAGATCCTCACATCTCCCAATGAGT +
Preference number: 6 (lower is better)
Translates to: WVSFHRSHTWYS*SQSRSSHLPMS
Trigger: ACTCATTGGGAGATGTGAGGATCTGGATTGGGACCAGCTATACCATGTATGGGATCTATGAAATGATACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371106.4
CDS GCA 72 bp CCTCATTGCAAAACATTCTGCAACTACAATTTCAAATaGTCTATCTTTATAGTCCCACCGCCCCTCCTTCTA +
Preference number: 6 (lower is better)
Translates to: PHCKTFCNYNFK*SIFIVPPPLLL
Trigger: TAGAAGGAGGGGCGGTGGGACTATAAAGATAGAGCATTTGAAATTGTAGTTGCAGAATGTTTTGCAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371105.7