Pregenerated sensors for XKR9 (Homo sapiens)
Ensembl gene IDs: ENSG00000221947Ensembl transcript IDs: ENST00000408926.8, ENST00000520030.5, ENST00000520092.5, ENST00000520273.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACAAGGAAAATGGGAGGGAAGCTCAATTCCAGCCTTCTCATTATaGAAACCAGACCATTTCTTATATTTCAGGCTCAAGATGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: EQGKWEGSSIPAFSL*KPDHFLYFRLKMAA Trigger: AGCTGCCATCTTGAGCCTGAAATATAAGAAATGGTCTGGTTTTCATAATGAGAAGGCTGGAATTGAGCTTCCCTCCCATTTTCCTTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR TCA 90 bp | AATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTaGATTGGAGATTTCATGGATGAAAGCACAGCAGATGCTAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: NVRPLRCTPILFCTY*IGDFMDESTADAKN Trigger: ATTTTTAGCATCTGCTGTGCTTTCATCCATGAAATCTCCAATTCAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR CCA 90 bp | TCTCATTATGAAAACCAGACCATTTCTTATATTTCAGGCTCAAGATaGCAGCTCTACCAGGCAGTAGAAAGATATCTGAGTACTCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SHYENQTISYISGSR*QLYQAVERYLSTQD Trigger: ATCTTGAGTACTCAGATATCTTTCTACTGCCTGGTAGAGCTGCCATCTTGAGCCTGAAATATAAGAAATGGTCTGGTTTTCATAATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR TCA 90 bp | TTAGTTTTACAAGGTGAAAAAGTCCTTGAGATCTGTTGCACAAGGTaGATACAGTTAACACTGATGAACTGTACACTCAAAGTGATTAAG | + |
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Preference number: 1 (lower is better) Translates to: LVLQGEKVLEICCTR*IQLTLMNCTLKVIK Trigger: CTTAATCACTTTGAGTGTACAGTTCATCAGTGTTAACTGTATTCACCTTGTGCAACAGATCTCAAGGACTTTTTCACCTTGTAAAACTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATCAGGAACAAGGAAAATaGGAGGGAAGCTCAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: PFPLLNLSPTANICTEDNQEQGK*EGSSIP Trigger: TGGAATTGAGCTTCCCTCCCATTTTCCTTGTTCCTG...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR-3UTR CCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCAATTTCAGGCTCAAGATaGCAGCTCTACCAGGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: IIISVERDLGKEEMGICSISGSR*QLYQAV Trigger: TACTGCCTGGTAGAGCTGCCATCTTGAGCCTGAAAT...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCTTGAAGAATAAGTTGTaGGCAGCCTTCCAGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: AFCQARIFLKLLDNQQLTLKNKL*AAFQVG Trigger: ACCTACCTGGAAGGCTGCCCACAACTTATTCTTCAA...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| 3UTR CAA 90 bp | TCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGAATaGGAGATTTCATGGATGAAAGCACAGCAGATGCTAAAAATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SDLSDAHQFSFALTE*EISWMKAQQMLKIC Trigger: ACAAATTTTTAGCATCTGCTGTGCTTTCATCCATGAAATCTCCAATTCAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR TCA 72 bp | GGAGGGATAGCTTTAGGAGATATACCTAATGATAAATaGCGAGTTAATGGGTGCAGCACACCAGCATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GGIALGDIPNDK*RVNGCSTPAWH Trigger: GTGCCATGCTGGTGTGCTGCACCCATTAACTCGTCATTTATCATTAGGTATATCTCCTAAAGCTATCCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR CCA 72 bp | GAAAACCAGACCATTTCTTATATTTCAGGCTCAAGATaGCAGCTCTACCAGGCAGTAGAAAGATATCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: ENQTISYISGSR*QLYQAVERYLS Trigger: ACTCAGATATCTTTCTACTGCCTGGTAGAGCTGCCATCTTGAGCCTGAAATATAAGAAATGGTCTGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCCTGACTGAAATTCGCTaGTCCATGCTCCAGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AFCQARIFLKLLDNQQLTLTEIR*SMLQKN Trigger: ATTCTTCTGGAGCATGGACAAGCGAATTTCAGTCAG...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| 3UTR TCA 72 bp | AAATGGGAGGGAAGCTCAATTCCAGCCTTCTCATTATaGAAACCAGACCATTTCTTATATTTCAGGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KWEGSSIPAFSL*KPDHFLYFRLK Trigger: CTTGAGCCTGAAATATAAGAAATGGTCTGGTTTTCATAATGAGAAGGCTGGAATTGAGCTTCCCTCCCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR-3UTR CAA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCACACACCAATTCTCTTTaGCACTTACTGAATTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: IIISVERDLGKEEMGICSHTNSL*HLLNWR Trigger: TCTCCAATTCAGTAAGTGCAAAAGAGAATTGGTGTG...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| 3UTR TCA 72 bp | CAAGGTGAAAAAGTCCTTGAGATCTGTTGCACAAGGTaGATACAGTTAACACTGATGAACTGTACACTCAAA | + |
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Preference number: 3 (lower is better) Translates to: QGEKVLEICCTR*IQLTLMNCTLK Trigger: TTTGAGTGTACAGTTCATCAGTGTTAACTGTATTCACCTTGTGCAACAGATCTCAAGGACTTTTTCACCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | AGAAATAGCACAGCAAGAGACCATGATGGCCGCATACTGACTGAAATTCGCTTGAGGCACCAGCCCCCGTaGCAGAGGCAGATTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RNSTARDHDGRILTEIRLRHQPP*QRQIPA Trigger: AGCTGGAATCTGCCTCTGTCACGGGGGCTGGTGCCT...CAAGCGAATTTCAGTCAGTATGCGGCCATCATGGTCTCTTGCTGTGCTATTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR GCA 90 bp | AGAAATAGCACAGCAAGAGACCATGATGGCCGCATACTGACTGAAATTCGCTTGCAAGGAGGTGGAGGCTaGAATGAGCTGGGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RNSTARDHDGRILTEIRLQGGGG*NELGRR Trigger: GCGCCTTCCCAGCTCATTGCAGCCTCCACCTCCTTG...CAAGCGAATTTCAGTCAGTATGCGGCCATCATGGTCTCTTGCTGTGCTATTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCAAGGCACCAGCCCCCGTaGCAGAGGCAGATTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSRHQPP*QRQIPA Trigger: AGCTGGAATCTGCCTCTGTCACGGGGGCTGGTGCCT...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCCTGGGAAGGCGCCACTaGAGGCCAGCCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTLGRRH*RPAWVT Trigger: TGTCACCCAGGCTGGCCTGCAGTGGCGCCTTCCCAG...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCGCAGGCCAGCCTGGGTaGCAGAGCAAGGCCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTAGQPG*QSKALV Trigger: TACAAGGGCCTTGCTCTGTCACCCAGGCTGGCCTGC...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATGTGGGAACTGAACAATaGGAACACATGGACACAGGA | + |
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Preference number: 4 (lower is better) Translates to: PFPLLNLSPTANICTEDNVGTEQ*EHMDTG Trigger: TCCTGTGTCCATGTGTTCTCATTGTTCAGTTCCCAC...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | ATAATGAAATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGTGGCCGCATACTGACTaGAATTCGCTTGTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IMKCQTSQMHTNSLLHLLWPHTD*NSLVHA Trigger: AGCATGGACAAGCGAATTTCAGTCAGTATGCGGCCA...CAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATTTCATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCTGCAGGAGAATCTCTTaGACCAAGGAGGTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTCRRIS*TKEVEA Trigger: AGCCTCCACCTCCTTGGTTCAAGAGATTCTCCTGCA...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATTTGAAGAATAAGTTGTaGGCAGCCTTCCAGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PFPLLNLSPTANICTEDNLKNKL*AAFQVG Trigger: ACCTACCTGGAAGGCTGCCCACAACTTATTCTTCAA...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | TTCTTCCACGAAGTTACTAGTATTGCTGTCATATTTAAAAGCTGCATGGTAACCTGGCCGCATACTGACTaGAATTCGCTTGTCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: FFHEVTSIAVIFKSCMVTWPHTD*NSLVHA Trigger: AGCATGGACAAGCGAATTTCAGTCAGTATGCGGCCA...GGTTACCATGCAGCTTTTAAATATGACAGCAATACTAGTAACTTCGTGGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CCA 90 bp | AGAAATAGCACAGCAAGAGACCATGATGGCCGCATACTGACTGAAATTCGCTTGACATACTGTCCTTCATaGAAAAATCTGACAGATACC | + |
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Preference number: 4 (lower is better) Translates to: RNSTARDHDGRILTEIRLTYCPS*KNLTDT Trigger: GGTATCTGTCAGATTTTTCCATGAAGGACAGTATGT...CAAGCGAATTTCAGTCAGTATGCGGCCATCATGGTCTCTTGCTGTGCTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCACTCATAGGTGGGAACTaGACAATGAGAACACATGGA | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSLIGGN*TMRTHG Trigger: TCCATGTGTTCTCATTGTTCAGTTCCCACCTATGAG...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR GCA 90 bp | ATAATGAAATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGGTCAGACCTCTCAGATaGACACCAATTCTCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: IMKCQTSQMHTNSLLHLLVRPLR*TPILFC Trigger: GCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGAC...CAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATTTCATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR GCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATCCCACCACTTCCAAATaGCATCAACATACAAATTTG | + |
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Preference number: 4 (lower is better) Translates to: PFPLLNLSPTANICTEDNPTTSK*HQHTNL Trigger: CAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGG...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | AGAAATAGCACAGCAAGAGACCATGATGGCCGCATACTGACTGAAATTCGCTTGATAATAACAAGACATTaGACACTTGGTATTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RNSTARDHDGRILTEIRLIITRH*TLGILS Trigger: GGACAGAATACCAAGTGTCCAATGTCTTGTTATTAT...CAAGCGAATTTCAGTCAGTATGCGGCCATCATGGTCTCTTGCTGTGCTATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CCA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATATTTCAGGCTCAAGATaGCAGCTCTACCAGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDISGSR*QLYQAV Trigger: TACTGCCTGGTAGAGCTGCCATCTTGAGCCTGAAAT...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATATTCTCACTCATAGGTaGGAACTGAACAATGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PFPLLNLSPTANICTEDNILTHR*ELNNEN Trigger: GTTCTCATTGTTCAGTTCCCACCTATGAGTGAGAAT...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCACCTCCTTGCAAGCAATaGAGTAGAAGAAAACAATGC | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSPPCKQ*SRRKQC Trigger: GCATTGTTTTCTTCTACTTCATTGCTTGCAAGGAGG...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCAAGGTCTCAAATAGTCTaGGCATGCTCAAATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSRSQIV*ACSNQS Trigger: TGACTGATTTGAGCATGCTCAGACTATTTGAGACCT...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATACTCAAAGTCCCTTCTaGAAAAATCTTCATCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PFPLLNLSPTANICTEDNTQSPF*KNLHLV Trigger: CACAAGATGAAGATTTTTCCAGAAGGGACTTTGAGT...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATCAGGAACAAGGAAAATaGGAGGGAAGCTCAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDQEQGK*EGSSIP Trigger: TGGAATTGAGCTTCCCTCCCATTTTCCTTGTTCCTG...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCATCCTTTGTAGGGACATaGATGAAGCTGGAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSSFVGT*MKLEII Trigger: GATGATTTCCAGCTTCATCCATGTCCCTACAAAGGA...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | ATAATGAAATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGATAAAAAGCCATCTTTaGCTCAAAGTCCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IMKCQTSQMHTNSLLHLLIKSHL*LKVPSG Trigger: TCCAGAAGGGACTTTGAGTCAAAGATGGCTTTTTAT...CAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATTTCATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCACTTCATGGAAAAATCTaGCAGATACCCATATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSLHGKI*QIPICP Trigger: TGGACATATGGGTATCTGTCAGATTTTTCCATGAAG...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCCCTCCTTGCAAGCAATaGAGTAGAAGAAAACAATGC | + |
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Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTPPCKQ*SRRKQC Trigger: GCATTGTTTTCTTCTACTTCATTGCTTGCAAGGAGG...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCAGGTCTCAAATAGTCTaGGCATGCTCAAATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTRSQIV*ACSNQS Trigger: TGACTGATTTGAGCATGCTCAGACTATTTGAGACCT...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR TCA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCATAAAAAGCCATCTTTaGCTCAAAGTCCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AFCQARIFLKLLDNQQLTIKSHL*LKVPSG Trigger: TCCAGAAGGGACTTTGAGTCAAAGATGGCTTTTTAT...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CCA 90 bp | ATAATGAAATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGACATACTGTCCTTCATaGAAAAATCTGACAGATACC | + |
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Preference number: 4 (lower is better) Translates to: IMKCQTSQMHTNSLLHLLTYCPS*KNLTDT Trigger: GGTATCTGTCAGATTTTTCCATGAAGGACAGTATGT...CAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATTTCATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR TCA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATAATTATAATTTCAGTTaGGAGAGACTTGGGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDNYNFS*ERLGEG Trigger: TCCTTCCCCAAGTCTCTCTCAACTGAAATTATAATT...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCCACGAAGTTACTAGTATTGCTGTCATATTTAAAAGCTGCATGGTAACCACTCAAAGTCCCTTCTaGAAAAATCTTCATCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: FFHEVTSIAVIFKSCMVTTQSPF*KNLHLV Trigger: CACAAGATGAAGATTTTTCCAGAAGGGACTTTGAGT...GGTTACCATGCAGCTTTTAAATATGACAGCAATACTAGTAACTTCGTGGAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CCA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCAATAATAACAAGACATTaGACACTTGGTATTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: IIISVERDLGKEEMGICSIITRH*TLGILS Trigger: GGACAGAATACCAAGTGTCCAATGTCTTGTTATTAT...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CCA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATCCAACAACAATAGACTaGATTAAGAAAATGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDPTTID*IKKMWH Trigger: GTGCCACATTTTCTTAATCCAGTCTATTGTTGTTGG...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS TCA 90 bp | CCACTCGCCTGTCTAGGACACAAACCCGTGAGGCACCAGCCCCCGTaGCAGAGGCAGATTCCAGCTTCGCCTCACGCCACCTCACGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PLACLGHKPVRHQPP*QRQIPASPHATSRL Trigger: GAGGCGTGAGGTGGCGTGAGGCGAAGCTGGAATCTGCCTCTGTCACGGGGGCTGGTGCCTCACGGGTTTGTGTCCTAGACAGGCGAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000408926.8 ENST00000520092.5 |
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| CDS-3UTR CAA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCAATGTCTCTCGCCCACTaGGATCCACTCGCCTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: IIISVERDLGKEEMGICSMSLAH*DPLACL Trigger: TAGACAGGCGAGTGGATCCAAGTGGGCGAGAGACAT...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CAA 90 bp | TTCTTCCACGAAGTTACTAGTATTGCTGTCATATTTAAAAGCTGCATGGTAACCATGTCTCTCGCCCACTaGGATCCACTCGCCTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: FFHEVTSIAVIFKSCMVTMSLAH*DPLACL Trigger: TAGACAGGCGAGTGGATCCAAGTGGGCGAGAGACAT...GGTTACCATGCAGCTTTTAAATATGACAGCAATACTAGTAACTTCGTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CAA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATGAGTTGAAGAATAAGTaGTGGGCAGCCTTCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDELKNK*WAAFQV Trigger: TACCTGGAAGGCTGCCCACAACTTATTCTTCAACTC...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CAA 90 bp | ATAATGAAATGTCAGACCTCTCAGATGCACACCAATTCTCTTTTGCACTTACTGCTGACTGAAATTCGCTaGTCCATGCTCCAGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: IMKCQTSQMHTNSLLHLLLTEIR*SMLQKN Trigger: ATTCTTCTGGAGCATGGACAAGCGAATTTCAGTCAG...CAGTAAGTGCAAAAGAGAATTGGTGTGCATCTGAGAGGTCTGACATTTCATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CAA 90 bp | CCTTTTCCTCTACTCAACCTGTCCCCAACTGCAAATATATGCACTGAAGACAATTTTCTGCACTTCTGTTaGGGTGAAAACTCCCATAAT | + |
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Preference number: 5 (lower is better) Translates to: PFPLLNLSPTANICTEDNFLHFC*GENSHN Trigger: ATTATGGGAGTTTTCACCCAAACAGAAGTGCAGAAA...ATTGTCTTCAGTGCATATATTTGCAGTTGGGGACAGGTTGAGTAGAGGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CAA 90 bp | ATTATAATTTCAGTTGAGAGAGACTTGGGGAAGGAGGAAATGGGGATTTGTTCATATAAAAAGCCATCTTaGACTCAAAGTCCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: IIISVERDLGKEEMGICSYKKPS*TQSPFW Trigger: CCAGAAGGGACTTTGAGTCAAAGATGGCTTTTTATA...TGAACAAATCCCCATTTCCTCCTTCCCCAAGTCTCTCTCAACTGAAATTATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS TCA 90 bp | CTAGGTCCAATGTTACAAGGCTTTAATCAATCTTCTGTTTCACAATaGTCTTCATTACAGATGACAAGACTGAGAAGGTGGCATTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LGPMLQGFNQSSVSQ*SSLQMTRLRRWHLS Trigger: ACTCAAATGCCACCTTCTCAGTCTTGTCATCTGTAATGAAGATCATTGTGAAACAGAAGATTGATTAAAGCCTTGTAACATTGGACCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520030.5 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCTATAAAAAGCCATCTTaGACTCAAAGTCCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AFCQARIFLKLLDNQQLTYKKPS*TQSPFW Trigger: CCAGAAGGGACTTTGAGTCAAAGATGGCTTTTTATA...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CAA 90 bp | AATAAACAAAGTCCCCACCACTTCCAAATGCCATCAACATACAAATTTGGAGATCAAGACATTGGACACTaGGTATTCTGTCCCTTAATA | + |
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Preference number: 5 (lower is better) Translates to: NKQSPHHFQMPSTYKFGDQDIGH*VFCPLI Trigger: TATTAAGGGACAGAATACCAAGTGTCCAATGTCTTG...ATCTCCAAATTTGTATGTTGATGGCATTTGGAAGTGGTGGGGACTTTGTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408926.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGTCAGGCAAGGATTTTCTTAAAGCTACTTGATAATCAACAGTTGACCCAAGACATTGGACACTaGGTATTCTGTCCCTTAATA | + |
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Preference number: 5 (lower is better) Translates to: AFCQARIFLKLLDNQQLTQDIGH*VFCPLI Trigger: TATTAAGGGACAGAATACCAAGTGTCCAATGTCTTG...GGTCAACTGTTGATTATCAAGTAGCTTTAAGAAAATCCTTGCCTGACAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS-3UTR CAA 90 bp | TTCTTCCACGAAGTTACTAGTATTGCTGTCATATTTAAAAGCTGCATGGTAACCTTTCTGCACTTCTGTTaGGGTGAAAACTCCCATAAT | + |
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Preference number: 5 (lower is better) Translates to: FFHEVTSIAVIFKSCMVTFLHFC*GENSHN Trigger: ATTATGGGAGTTTTCACCCAAACAGAAGTGCAGAAA...GGTTACCATGCAGCTTTTAAATATGACAGCAATACTAGTAACTTCGTGGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520092.5 |
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| CDS TCA 72 bp | TGTCTAGGACACAAACCCGTGAGGCACCAGCCCCCGTaGCAGAGGCAGATTCCAGCTTCGCCTCACGCCACC | + |
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Preference number: 6 (lower is better) Translates to: CLGHKPVRHQPP*QRQIPASPHAT Trigger: GGTGGCGTGAGGCGAAGCTGGAATCTGCCTCTGTCACGGGGGCTGGTGCCTCACGGGTTTGTGTCCTAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000408926.8 ENST00000520030.5 ENST00000520092.5 |
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| CDS CAA 90 bp | TCCCAAATCACAAGACTCTTCCAGATTAAAATGTCTCTCGCCCACTaGGATCCACTCGCCTGTCTAGGACACAAACCCGTGAGGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SQITRLFQIKMSLAH*DPLACLGHKPVRHQ Trigger: CTGGTGCCTCACGGGTTTGTGTCCTAGACAGGCGAGTGGATCCAAGTGGGCGAGAGACATTTTAATCTGGAAGAGTCTTGTGATTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000408926.8 ENST00000520030.5 ENST00000520092.5 ENST00000520273.1 |
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| CDS CAA 72 bp | ACAAGACTCTTCCAGATTAAAATGTCTCTCGCCCACTaGGATCCACTCGCCTGTCTAGGACACAAACCCGTG | + |
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Preference number: 6 (lower is better) Translates to: TRLFQIKMSLAH*DPLACLGHKPV Trigger: CACGGGTTTGTGTCCTAGACAGGCGAGTGGATCCAAGTGGGCGAGAGACATTTTAATCTGGAAGAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000408926.8 ENST00000520030.5 ENST00000520092.5 ENST00000520273.1 |
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| CDS CAA 72 bp | TCTTCATTACAGATGACAAGACTGAGAAGGTGGCATTaGAGTAGTGAAATTGGCCATGTGCATAGAGATGGA | + |
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Preference number: 6 (lower is better) Translates to: SSLQMTRLRRWH*SSEIGHVHRDG Trigger: TCCATCTCTATGCACATGGCCAATTTCACTACTCAAATGCCACCTTCTCAGTCTTGTCATCTGTAATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520030.5 |
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