RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XKR7 (Homo sapiens)

Ensembl gene IDs: ENSG00000260903

Ensembl transcript IDs: ENST00000562532.3

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCACAGGGTCTAGGTCATGGACCCCAGACAGTGCCCTTTCTCTaGCAAGTCCAGCAGGGGCAACACATGGGCAACGCCAGGCAGGGG +
Preference number: 1 (lower is better)
Translates to: GAQGLGHGPQTVPFL*QVQQGQHMGNARQG
Trigger: CCCCTGCCTGGCGTTGCCCATGTGTTGCCCCTGCTGGACTTGCCAGAGAAAGGGCACTGTCTGGGGTCCATGACCTAGACCCTGTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp GACAAGCCAGTGGAGCAGGGGGCCTCAGGCCTGGTCCCGAGCTCCTaGGTGGAGAGTCCTTTAAGGGCTGAGACTCTTCTGAGGGTGAGA +
Preference number: 1 (lower is better)
Translates to: DKPVEQGASGLVPSS*VESPLRAETLLRVR
Trigger: TCTCACCCTCAGAAGAGTCTCAGCCCTTAAAGGACTCTCCACCCAGGAGCTCGGGACCAGGCCTGAGGCCCCCTGCTCCACTGGCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp CAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATaGTCCAACCTCACCCCATCCCTTCCACGGCCACCTCCATCCTTC +
Preference number: 1 (lower is better)
Translates to: QASDATGATPSLSTQ*SNLTPSLPRPPPSF
Trigger: GAAGGATGGAGGTGGCCGTGGAAGGGATGGGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp CTGGGAGGGAGACAGGTGCCAAAGGTGGCAGGGGCCAGCACAGAATaGGACTCTTGGGTCCTGGCTTTCAGTCCACATCCTGCACCTGGA +
Preference number: 1 (lower is better)
Translates to: LGGRQVPKVAGASTE*DSWVLAFSPHPAPG
Trigger: TCCAGGTGCAGGATGTGGACTGAAAGCCAGGACCCAAGAGTCCCATTCTGTGCTGGCCCCTGCCACCTTTGGCACCTGTCTCCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp CTACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTaGAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCCAAG +
Preference number: 1 (lower is better)
Translates to: LPLDQQIHSPLAWWP*NSGHNTAADVGSAK
Trigger: CTTGGCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp CACATCAGTGCCAGGAGGCGCCGTGATGTGGGTGTGTGTGGTGCCTaGAGAGGTTTGGGGAACACAGTCAACAGCGTGGGGGTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: HISARRRRDVGVCGA*RGLGNTVNSVGVSS
Trigger: AGAACTGACCCCCACGCTGTTGACTGTGTTCCCCAAACCTCTGCAGGCACCACACACACCCACATCACGGCGCCTCCTGGCACTGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp GGGAGGGTGACCCGTATCATGGTTGTGCTTGTGCTTGTGTGTATGTaGGCAGTCTGGCCCTCCCTGCCTTTGGGGTTACCCTGCATCCCC +
Preference number: 1 (lower is better)
Translates to: GRVTRIMVVLVLVCM*AVWPSLPLGLPCIP
Trigger: GGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACACACAAGCACAAGCACAACCATGATACGGGTCACCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp CTTTGTCCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTaGGACCCCCACCCATTCAGCCTGGCCAGGGGTGCCCTTGCAGTG +
Preference number: 1 (lower is better)
Translates to: LCPRIPSILRLLQVP*DPHPFSLARGALAV
Trigger: CACTGCAAGGGCACCCCTGGCCAGGCTGAATGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGGACAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp CAAAAGAACCGGGTTCTGGTCTCACCCTGCCACCAACTTGCTGTGTaGCCTTGGGCTGGCCATCTCCCATCTCTGGGCTTGCCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: QKNRVLVSPCHQLAV*PWAGHLPSLGLPLQ
Trigger: CTGAAGGGGCAAGCCCAGAGATGGGAGATGGCCAGCCCAAGGTCACACAGCAAGTTGGTGGCAGGGTGAGACCAGAACCCGGTTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp ATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTaGCAGGTGCTAGAATCCCCCACAGCAGAGCAGCAGGCCTCCAGT +
Preference number: 1 (lower is better)
Translates to: IPFTLGSRTSSPPPL*QVLESPTAEQQASS
Trigger: ACTGGAGGCCTGCTGCTCTGCTGTGGGGGATTCTAGCACCTGTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp GGGATGATGCGTACACCATCTCGGCCTGTGTGCTGGTGGGGAGGGTaGCCCGTATCATGGTTGTGCTTGTGCTTGTGTGTATGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: GMMRTPSRPVCWWGG*PVSWLCLCLCVCGQ
Trigger: CTGCCCACATACACACAAGCACAAGCACAACCATGATACGGGTCACCCTCCCCACCAGCACACAGGCCGAGATGGTGTACGCATCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp GTGACAGTTACAAGGCACATGGCACATCAGTGCCAGGAGGCGCCGTaGTGTGGGTGTGTGTGGTGCCTGCAGAGGTTTGGGGAACACAGT +
Preference number: 1 (lower is better)
Translates to: VTVTRHMAHQCQEAP*CGCVWCLQRFGEHS
Trigger: ACTGTGTTCCCCAAACCTCTGCAGGCACCACACACACCCACATCACGGCGCCTCCTGGCACTGATGTGCCATGTGCCTTGTAACTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp CCAGGAGGCGCCGTGATGTGGGTGTGTGTGGTGCCTGCAGAGGTTTaGGGAACACAGTCAACAGCGTGGGGGTCAGTTCTAAGAAAACAG +
Preference number: 1 (lower is better)
Translates to: PGGAVMWVCVVPAEV*GTQSTAWGSVLRKQ
Trigger: CTGTTTTCTTAGAACTGACCCCCACGCTGTTGACTGTGTTCCCCAAACCTCTGCAGGCACCACACACACCCACATCACGGCGCCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp CTCATGGGTGACATGCCTCTGTGGGACACAGGTGTAGCAGGGAGCTaGCTGGGGGTAAGGCAGATTTGGGGGAGACACAAGAATGAGGCA +
Preference number: 1 (lower is better)
Translates to: LMGDMPLWDTGVAGS*LGVRQIWGRHKNEA
Trigger: TGCCTCATTCTTGTGTCTCCCCCAAATCTGCCTTACCCCCAGCCAGCTCCCTGCTACACCTGTGTCCCACAGAGGCATGTCACCCATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp CAGCAGAAAGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATaGTGCGTACACCATCTCGGCCTGTGTGCTGGTGGGGAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: QQKEGKALLLCWQEG*CVHHLGLCAGGEGD
Trigger: GTCACCCTCCCCACCAGCACACAGGCCGAGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCTTTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp GGGGACACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTaGCATATTTGGTACCCAAAGCATCCTGTTCTCTTCTGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: GDTGLLGLEVTEGRA*HIWYPKHPVLFCSW
Trigger: CCAGGAACAGAAGAGAACAGGATGCTTTGGGTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp AAGCCTCTATGGTTGGGAAGGGGGCTCAAACCCCAACCCTACTACTaGCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACAC +
Preference number: 1 (lower is better)
Translates to: KPLWLGRGLKPQPYY*PCGLTPTCSLPLRH
Trigger: GTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCCCCTTCCCAACCATAGAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp ACCCGTATCATGGTTGTGCTTGTGCTTGTGTGTATGTGGGCAGTCTaGCCCTCCCTGCCTTTGGGGTTACCCTGCATCCCCAGCAATTCA +
Preference number: 1 (lower is better)
Translates to: TRIMVVLVLVCMWAV*PSLPLGLPCIPSNS
Trigger: TGAATTGCTGGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACACACAAGCACAAGCACAACCATGATACGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp ACACACCCAACTACCTCTCATCCCCAGGGAAATCCTAACTGCCACTaGCTTCCTGTGTGGCCTTTGGTGAGTCCTTGGTCCTCTCTGGGT +
Preference number: 1 (lower is better)
Translates to: THPTTSHPQGNPNCH*LPVWPLVSPWSSLG
Trigger: ACCCAGAGAGGACCAAGGACTCACCAAAGGCCACACAGGAAGTCAGTGGCAGTTAGGATTTCCCTGGGGATGAGAGGTAGTTGGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp CCACCTCACTCCAGGATCAGGTTGGCATCTGTCCTTAACATCCGCTaGTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGT +
Preference number: 1 (lower is better)
Translates to: PPHSRIRLASVLNIR*CPLPPITPKLLWEC
Trigger: ACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGCGGATGTTAAGGACAGATGCCAACCTGATCCTGGAGTGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp TGGTTGTGCTTGTGCTTGTGTGTATGTGGGCAGTCTGGCCCTCCCTaGCTTTGGGGTTACCCTGCATCCCCAGCAATTCATCATTACCCA +
Preference number: 1 (lower is better)
Translates to: WLCLCLCVCGQSGPP*LWGYPASPAIHHYP
Trigger: TGGGTAATGATGAATTGCTGGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACACACAAGCACAAGCACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp CTATGGTTGGGAAGGGGGCTCAAACCCCAACCCTACTACTGCCCATaGGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAA +
Preference number: 1 (lower is better)
Translates to: LWLGRGLKPQPYYCP*GLTPTCSLPLRHCK
Trigger: TTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCCCCTTCCCAACCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp GCAATTCATCATTACCCATCACCTTTTGATGGGCAGCCCAGAGTCTaGGACCTTGAGAGAGTGGCTGCCACTCTGGGCCTCAGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: AIHHYPSPFDGQPRV*DLERVAATLGLSFP
Trigger: TGGGAAACTGAGGCCCAGAGTGGCAGCCACTCTCTCAAGGTCCCAGACTCTGGGCTGCCCATCAAAAGGTGATGGGTAATGATGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp ATTCCAAGGGAAGAACCTGCAGAACTCGAGTACTTAGGAGGGTGTTaGCTGCAAGCGAGACCTTCCCTGGATATTCCCAGCTCCCTCAGC +
Preference number: 1 (lower is better)
Translates to: IPREEPAELEYLGGC*LQARPSLDIPSSLS
Trigger: GCTGAGGGAGCTGGGAATATCCAGGGAAGGTCTCGCTTGCAGTCAACACCCTCCTAAGTACTCGAGTTCTGCAGGTTCTTCCCTTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp TCGTTCCTGAGGGTGCTTAGCAGCAGAAAGAAGGAAAAGCACTCTTaGTGTGTTGGCAGGAGGGATGATGCGTACACCATCTCGGCCTGT +
Preference number: 1 (lower is better)
Translates to: SFLRVLSSRKKEKHS*CVGRRDDAYTISAC
Trigger: ACAGGCCGAGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCTTTCTGCTGCTAAGCACCCTCAGGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp ACGGCTTTGTGTGTGAATTCAGCCTCCAAAGATGGATTTGGAGGATaGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTC +
Preference number: 1 (lower is better)
Translates to: TALCVNSASKDGFGG*MNPTEWAWVSLGLL
Trigger: GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp GGCTTCTGTGGACTCCAGGTCCAGATTAATTCCAAGGGAAGAACCTaGAGAACTCGAGTACTTAGGAGGGTGTTGACTGCAAGCGAGACC +
Preference number: 1 (lower is better)
Translates to: GFCGLQVQINSKGRT*RTRVLRRVLTASET
Trigger: GGTCTCGCTTGCAGTCAACACCCTCCTAAGTACTCGAGTTCTGCAGGTTCTTCCCTTGGAATTAATCTGGACCTGGAGTCCACAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp AAGCACTTTAATATAGAAACTACAGCTCCCCCTACCAACCTCTACTaGAGGCCCCACCACAGCTTGAACTGGGAGGGAGACAGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: KHFNIETTAPPTNLY*RPHHSLNWEGDRCQ
Trigger: TTGGCACCTGTCTCCCTCCCAGTTCAAGCTGTGGTGGGGCCTGCAGTAGAGGTTGGTAGGGGGAGCTGTAGTTTCTATATTAAAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp TCTCACAACGGCTTTGTGTGTGAATTCAGCCTCCAAAGATGGATTTaGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: SHNGFVCEFSLQRWI*RMDEPNRVGLGQPW
Trigger: CCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGTTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp CTCCCATCTCACAACGGCTTTGTGTGTGAATTCAGCCTCCAAAGATaGATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAG +
Preference number: 1 (lower is better)
Translates to: LPSHNGFVCEFSLQR*IWRMDEPNRVGLGQ
Trigger: CTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGTTGTGAGATGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp GAAAATTCCTGGCACAAAGTTGGCCCTGGAGAAACAGTCTGTTTCTaGGTCTGGGTCCGCATCTTCAGAGCTCCCATCTCACAACGGCTT +
Preference number: 1 (lower is better)
Translates to: ENSWHKVGPGETVCF*VWVRIFRAPISQRL
Trigger: AAGCCGTTGTGAGATGGGAGCTCTGAAGATGCGGACCCAGACCCAGAAACAGACTGTTTCTCCAGGGCCAACTTTGTGCCAGGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp ATGAGGGAGCTATGGGAACGGTTCAGATACCTTCCAGCTATTTCATaGTGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATATG +
Preference number: 1 (lower is better)
Translates to: MRELWERFRYLPAIS*WVRKASGAGGYVYM
Trigger: CATATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTGGAAGGTATCTGAACCGTTCCCATAGCTCCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 90 bp ACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTaGTGTGTTGAAGACCTGTATCTAGAAGCCACGTTCCAGGTGCAC +
Preference number: 1 (lower is better)
Translates to: TSPALEPRDLSRHLI*CVEDLYLEATFQVH
Trigger: GTGCACCTGGAACGTGGCTTCTAGATACAGGTCTTCAACACAGCAGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 90 bp TTTCCAGCTGGGAACCAGTTGGCAGCTGAAATGTCTCAGGGGTTCTaGGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAAC +
Preference number: 1 (lower is better)
Translates to: FPAGNQLAAEMSQGF*GQFPFRKMAMDQGN
Trigger: GTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCTGAGACATTTCAGCTGCCAACTGGTTCCCAGCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 90 bp AACCTTCTCAACATTTTGAACCGTAAGTCTCAAACTGGTGGCACGTaGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTT +
Preference number: 1 (lower is better)
Translates to: NLLNILNRKSQTGGT*AKYEWPAVSQTFEF
Trigger: AAATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAGTTTGAGACTTACGGTTCAAAATGTTGAGAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATAACGGGGCCCAGGGCTaGGGCCTCCGCAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENNGAQG*GLRKAA
Trigger: GGCAGCCTTGCGGAGGCCCCAGCCCTGGGCCCCGTT...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCACAGCCTCTAACCCCATaGGGCACTGGAGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPQPLTP*GTGGAC
Trigger: ACAGGCCCCTCCAGTGCCTCATGGGGTTAGAGGCTG...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTTGGGAGGAGGGGCCCTaGGTGAGTCCCCTGGGCACT +
Preference number: 2 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASWEEGP*VSPLGT
Trigger: AGTGCCCAGGGGACTCACCCAGGGCCCCTCCTCCCA...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCCAACAGAGTGGGCCTaGGTCAGCCTTGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCPTEWA*VSLGLL
Trigger: GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTACTCTCCACAACCCCTaGGGAGCACAGGGTCTAGGT +
Preference number: 2 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCTLHNP*GAQGLG
Trigger: ACCTAGACCCTGTGCTCCTCAGGGGTTGTGGAGAGT...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGGGGCTGCAAGGACCCTaGCAGGGTGGGAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQGLQGP*QGGKDR
Trigger: CCTGTCCTTCCCACCCTGCCAGGGTCCTTGCAGCCC...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTTTAGCCTGGTGGCCCTaGAATTCGGGGCACAACACT +
Preference number: 2 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCLAWWP*NSGHNT
Trigger: AGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCTAA...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCTGCTGGTGGGGAGGGTaGCCCGTATCATGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLCWWGG*PVSWLC
Trigger: GCACAACCATGATACGGGTCACCCTCCCCACCAGCA...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGAGCAGGGGCAACACATaGGCAACGCCAGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQSRGNT*ATPGRG
Trigger: TCCCCTGCCTGGCGTTGCCCATGTGTTGCCCCTGCT...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAGGTGTGTGTGGTGCCTaGAGAGGTTTGGGGAACACA +
Preference number: 2 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPGVCGA*RGLGNT
Trigger: TGTGTTCCCCAAACCTCTGCAGGCACCACACACACC...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACGGCTGCCCCCTCCCCTaGAAGAACCCAAGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHGCPLP*KNPRVG
Trigger: CCCCACTCTTGGGTTCTTTCAGGGGAGGGGGCAGCC...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTTCTCCCCCACCACTGTaGCAGGTGCTAGAATCCCCC +
Preference number: 2 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTSPPPL*QVLESP
Trigger: GGGGGATTCTAGCACCTGTCACAGTGGTGGGGGAGA...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCAGAGTCTGGGACCTTaGGAGAGTGGCTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQQSLGP*ESGCHS
Trigger: AGAGTGGCAGCCACTCTCTCAAGGTCCCAGACTCTG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTCAGTCTGGCCCTCCCTaGCTTTGGGGTTACCCTGCA +
Preference number: 2 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTQSGPP*LWGYPA
Trigger: TGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTG...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATGAAGGGACAAGCCAGTaGAGCAGGGGGCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNEGTSQ*SRGPQA
Trigger: GGCCTGAGGCCCCCTGCTCCACTGGCTTGTCCCTTC...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCAATCACACCTAAGTTaGTGTGGGAGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCQSHLS*CGSVCV
Trigger: CACACACACACTCCCACAGCAACTTAGGTGTGATTG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATCTGCCAGCACATCCCTaGCCCTTGGGAGTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNLPAHP*PLGVSW
Trigger: CCAGGAGACTCCCAAGGGGCAGGGATGTGCTGGCAG...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTACTCCAGGATCAGGTTaGCATCTGTCCTTAACATCC +
Preference number: 2 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCTPGSG*HLSLTS
Trigger: GGATGTTAAGGACAGATGCCAACCTGATCCTGGAGT...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp TTGGGAAGGGGGCTCAAACCCCAACCCTACTACTGCCCATGCGGCTaGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTT +
Preference number: 2 (lower is better)
Translates to: LGRGLKPQPYYCPCG*TPTCSLPLRHCKAL
Trigger: AAGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCCCCTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTCTCCCTGGGCCCTTTaGCTGTGGCCATTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNSPWAL*LWPFLC
Trigger: GCACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAAGCTCCAGGCCTCAGATaGTACAGGAGCCACGCCATC +
Preference number: 2 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQAPGLR*YRSHAI
Trigger: GATGGCGTGGCTCCTGTAGCATCTGAGGCCTGGAGC...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTCTTCAGCTCCCTCTTaGCCTGGCTCCAGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHSSAPS*PGSRPQ
Trigger: CTGAGGCCTGGAGCCAGGGCAAGAGGGAGCTGAAGA...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCCCTTTGGGGTTACCCTaGATCCCCAGCAATTCATCA +
Preference number: 2 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLPLGLP*IPSNSS
Trigger: TGATGAATTGCTGGGGATGCAGGGTAACCCCAAAGG...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTGTATGTGGGCAGTCTaGCCCTCCCTGCCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNCMWAV*PSLPLG
Trigger: CCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCCCCAGAAGTCTAGAATaGGAGCACCCATTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLPRSLE*EHPFLE
Trigger: TTCTAGGAATGGGTGCTCTCATTCTAGACTTCTGGG...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTGCTGTTCAGCTGGGGTaGCAGTTACAAGGCACATGG +
Preference number: 2 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPAVQLG*QLQGTW
Trigger: CCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGC...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTATGGACCCCAGACAGTaGCCTTTCTCTGGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPMDPRQ*PFSGKS
Trigger: GGACTTGCCAGAGAAAGGGCACTGTCTGGGGTCCAT...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACGCTATGCTCTGGATTaGAGGTTCCCCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQRYALD*RFPSPK
Trigger: CTTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGGGGGAATTTAGGGAATaGGCCACAAGGCTGAAAACG +
Preference number: 2 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVGEFRE*ATRLKT
Trigger: CGTTTTCAGCCTTGTGGCCCATTCCCTAAATTCCCC...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGTGCTTGTGTGTATGTaGGCAGTCTGGCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIVLVCM*AVWPSL
Trigger: CAGGGAGGGCCAGACTGCCCACATACACACAAGCAC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAACACAGTCAACAGCGTaGGGGTCAGTTCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPTQSTA*GSVLRK
Trigger: TTTTCTTAGAACTGACCCCCACGCTGTTGACTGTGT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTCACCACAGCTTGAACTaGGAGGGAGACAGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPHHSLN*EGDRCQ
Trigger: TTGGCACCTGTCTCCCTCCCAGTTCAAGCTGTGGTG...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp AACCCAAGAGAGGCTGAACCAGGGAGGGCTAAGCATCCCTCTAATTaGCATAGTCTAGGATTCTCATGGCCCACCTCACTCCAGGATCAG +
Preference number: 2 (lower is better)
Translates to: NPREAEPGRAKHPSN*HSLGFSWPTSLQDQ
Trigger: CTGATCCTGGAGTGAGGTGGGCCATGAGAATCCTAGACTATGCAAATTAGAGGGATGCTTAGCCCTCCCTGGTTCAGCCTCTCTTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp CTGGGTCTGGGTCCGCATCTTCAGAGCTCCCATCTCACAACGGCTTaGTGTGTGAATTCAGCCTCCAAAGATGGATTTGGAGGATGGATG +
Preference number: 2 (lower is better)
Translates to: LGLGPHLQSSHLTTA*CVNSASKDGFGGWM
Trigger: CATCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGTTGTGAGATGGGAGCTCTGAAGATGCGGACCCAGACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp AATTCCAAGGGAAGAACCTGCAGAACTCGAGTACTTAGGAGGGTGTaGACTGCAAGCGAGACCTTCCCTGGATATTCCCAGCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: NSKGRTCRTRVLRRV*TASETFPGYSQLPQ
Trigger: CTGAGGGAGCTGGGAATATCCAGGGAAGGTCTCGCTTGCAGTCAACACCCTCCTAAGTACTCGAGTTCTGCAGGTTCTTCCCTTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCAAGTGTAGCACCAGATaGTTCCCCAGGCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISKCSTR*FPRPWV
Trigger: GACCCAGGGCCTGGGGAATCATCTGGTGCTACACTT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTTTCGGGGCACAACACTaGGGCGGATGTGGGATCAGC +
Preference number: 2 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSFGAQH*GGCGIS
Trigger: GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAA...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTACACTGCGGCGGATGTaGGATCAGCCAAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSTLRRM*DQPSLS
Trigger: GGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGT...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATACAGGGTCTAGGTCATaGACCCCAGACAGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNTGSRS*TPDSAL
Trigger: AAGGGCACTGTCTGGGGTCCATGACCTAGACCCTGT...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTTGGGGTGAAAATTCCTaGCACAAAGTTGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTWGENS*HKVGPG
Trigger: TCCAGGGCCAACTTTGTGCCAGGAATTTTCACCCCA...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp CAGAGCCCACAACACAACAAGAGACGTCTCCTAAGGAGTTCATTCTaGTTCGCTATGCTCTGGATTGCAGGTTCCCCTCCCCCAAGTCTT +
Preference number: 2 (lower is better)
Translates to: QSPQHNKRRLLRSSF*FAMLWIAGSPPPSL
Trigger: AAGACTTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCGAACAAGAATGAACTCCTTAGGAGACGTCTCTTGTTGTGTTGTGGGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAAAACCTCACCTGCACTTaGGCCCAGAGATCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQNLTCT*AQRSFQ
Trigger: CTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTT...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTGTCCTTAACATCCGCTaGTGTCCTCTCCCACCAATC +
Preference number: 2 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSVLNIR*CPLPPI
Trigger: GATTGGTGGGAGAGGACAGCAGCGGATGTTAAGGAC...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTGGGCCACTCTACCCTTaGACCAACAGATCCACTCCC +
Preference number: 2 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSGPLYP*TNRSTP
Trigger: GGGAGTGGATCTGTTGGTCCAAGGGTAGAGTGGCCC...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTATAGACCACAGGTCCTaGGGAGTCATCAGATCTAAG +
Preference number: 2 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTIDHRS*GVIRSK
Trigger: CTTAGATCTGATGACTCCCCAGGACCTGTGGTCTAT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATCCAGATGGGCCATTCTaGGATACTGGGGAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNPDGPF*DTGEEN
Trigger: ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGG...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGGGTCAGATTCGATCTaGGGGGATTTGGGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIGSDSI*GDLGER
Trigger: TCTCTCACCCAAATCCCCCCAGATCGAATCTGACCC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACTCTTATCTGCTGTGTTaGAGACCTGTATCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYSYLLC*RPVSRS
Trigger: GCTTCTAGATACAGGTCTTCAACACAGCAGATAAGA...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGAAACAGTCTGTTTCTaGGTCTGGGTCCGCATCTTC +
Preference number: 2 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIETVCF*VWVRIF
Trigger: GAAGATGCGGACCCAGACCCAGAAACAGACTGTTTC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTTAGAAAGATGGCTATaGACCAAGGTAACAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNLERWL*TKVTGA
Trigger: GGCCCCTGTTACCTTGGTCCATAGCCATCTTTCTAA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATCCCGTATCATGGTTGTaGTTGTGCTTGTGTGTATGT +
Preference number: 2 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNPVSWL*LCLCVC
Trigger: ACATACACACAAGCACAAGCACAACCATGATACGGG...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTTTCAGCCTCCAAAGATaGATTTGGAGGATGGATGAA +
Preference number: 2 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPFSLQR*IWRMDE
Trigger: TTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAA...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATATTCAAACATTTCACCTaGGGTGTGTGGAACTTCATC +
Preference number: 2 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIFKHFT*GVWNFI
Trigger: GATGAAGTTCCACACACCTCAGGTGAAATGTTTGAA...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR TCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAATGTCTCAGGGGTTCTaGGGACAATTTCCTTTTAGA +
Preference number: 2 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIMSQGF*GQFPFR
Trigger: TCTAAAAGGAAATTGTCCTCAGAACCCCTGAGACAT...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAGAAAGAACCCAAGAGTaGGGCCACTCTACCCTTGGA +
Preference number: 2 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTERTQE*GHSTLG
Trigger: TCCAAGGGTAGAGTGGCCCCACTCTTGGGTTCTTTC...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp TCTGGATCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTaGAGCCCAGAGATCTTTCCAGACATCTTATCTGCTGTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: SGSVPLITVLKPHLH*SPEIFPDILSAVLK
Trigger: CTTCAACACAGCAGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 90 bp CTCCCTATTGTCTCCATTACTCTTAGTTTCATTATCTCGAGGCATTaGAGTTTGCATCCCATGCAGCCTTCGTCCCAGAAAACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LPIVSITLSFIISRH*SLHPMQPSSQKTFS
Trigger: GGAGAAGGTTTTCTGGGACGAAGGCTGCATGGGATGCAAACTCAAATGCCTCGAGATAATGAAACTAAGAGTAATGGAGACAATAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTCCAGACATCTTATCTaGTGTGTTGAAGACCTGTAT +
Preference number: 2 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHSRHLI*CVEDLY
Trigger: ATACAGGTCTTCAACACAGCAGATAAGATGTCTGGA...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR GCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACACATTCTTGTTCGCTATaGTCTGGATTGCAGGTTCCC +
Preference number: 2 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTHSCSL*SGLQVP
Trigger: GGGAACCTGCAATCCAGAGCATAGCGAACAAGAATG...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TGCCCTTTCTCTGGCAAGTCCAGCAGGGGCAACACATaGGCAACGCCAGGCAGGGGAGAGGTGTGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: CPFSGKSSRGNT*ATPGRGEVWRP
Trigger: GGGCCTCCACACCTCTCCCCTGCCTGGCGTTGCCCATGTGTTGCCCCTGCTGGACTTGCCAGAGAAAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTaGAATTCGGGGCACAACACTGCGGCGGATGTGGGA +
Preference number: 3 (lower is better)
Translates to: DQQIHSPLAWWP*NSGHNTAADVG
Trigger: TCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp ACAAGGCACATGGCACATCAGTGCCAGGAGGCGCCGTaGTGTGGGTGTGTGTGGTGCCTGCAGAGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: TRHMAHQCQEAP*CGCVWCLQRFG
Trigger: CCCAAACCTCTGCAGGCACCACACACACCCACATCACGGCGCCTCCTGGCACTGATGTGCCATGTGCCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp CGGGTTCTGGTCTCACCCTGCCACCAACTTGCTGTGTaGCCTTGGGCTGGCCATCTCCCATCTCTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: RVLVSPCHQLAV*PWAGHLPSLGL
Trigger: CAAGCCCAGAGATGGGAGATGGCCAGCCCAAGGTCACACAGCAAGTTGGTGGCAGGGTGAGACCAGAACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp GATGCTACAGGAGCCACGCCATCCCTGTCCACACAATaGTCCAACCTCACCCCATCCCTTCCACGGCCACCT +
Preference number: 3 (lower is better)
Translates to: DATGATPSLSTQ*SNLTPSLPRPP
Trigger: AGGTGGCCGTGGAAGGGATGGGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CGCAAGGCTGCCCCCTCCCCTGAAAGAACCCAAGAGTaGGGCCACTCTACCCTTGGACCAACAGATCCACTC +
Preference number: 3 (lower is better)
Translates to: RKAAPSPERTQE*GHSTLGPTDPL
Trigger: GAGTGGATCTGTTGGTCCAAGGGTAGAGTGGCCCCACTCTTGGGTTCTTTCAGGGGAGGGGGCAGCCTTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TCCCAGATGCCGCTCCAGGGAGCCCCATTTGCAGAGTaGCTGAGAGCCAGGATTCATGTCACGTCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: SQMPLQGAPFAE*LRARIHVTSPE
Trigger: CTCTGGGGACGTGACATGAATCCTGGCTCTCAGCCACTCTGCAAATGGGGCTCCCTGGAGCGGCATCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp GCACATGGCACATCAGTGCCAGGAGGCGCCGTGATGTaGGTGTGTGTGGTGCCTGCAGAGGTTTGGGGAACA +
Preference number: 3 (lower is better)
Translates to: AHGTSVPGGAVM*VCVVPAEVWGT
Trigger: TGTTCCCCAAACCTCTGCAGGCACCACACACACCCACATCACGGCGCCTCCTGGCACTGATGTGCCATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTaGGACCCCCACCCATTCAGCCTGGCCAGGGGTGCC +
Preference number: 3 (lower is better)
Translates to: RIPSILRLLQVP*DPHPFSLARGA
Trigger: GGCACCCCTGGCCAGGCTGAATGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp ACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTaGCAGGTGCTAGAATCCCCCACAGCAGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: TLGSRTSSPPPL*QVLESPTAEQQ
Trigger: CTGCTGCTCTGCTGTGGGGGATTCTAGCACCTGTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp CCTTCCCTGCCCTCTGTCTTTCCCGACTCTCATGGGTaGCATGCCTCTGTGGGACACAGGTGTAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: PSLPSVFPDSHG*HASVGHRCSRE
Trigger: CTCCCTGCTACACCTGTGTCCCACAGAGGCATGTCACCCATGAGAGTCGGGAAAGACAGAGGGCAGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp CTTAGCCTGGTGGCCCTGAAATTCGGGGCACAACACTaGGGCGGATGTGGGATCAGCCAAGCCTGTCCCTTT +
Preference number: 3 (lower is better)
Translates to: LSLVALKFGAQH*GGCGISQACPF
Trigger: AAAGGGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp GACATGCCTCTGTGGGACACAGGTGTAGCAGGGAGCTaGCTGGGGGTAAGGCAGATTTGGGGGAGACACAAG +
Preference number: 3 (lower is better)
Translates to: DMPLWDTGVAGS*LGVRQIWGRHK
Trigger: CTTGTGTCTCCCCCAAATCTGCCTTACCCCCAGCCAGCTCCCTGCTACACCTGTGTCCCACAGAGGCATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TATTGCAGGTGCCCTGGGACCCCCACCCATTCAGCCTaGCCAGGGGTGCCCTTGCAGTGGTTATGCATAGAA +
Preference number: 3 (lower is better)
Translates to: YCRCPGTPTHSA*PGVPLQWLCIE
Trigger: TTCTATGCATAACCACTGCAAGGGCACCCCTGGCCAGGCTGAATGGGTGGGGGTCCCAGGGCACCTGCAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTTTCTTCAGCTCCCTCTaGCCCTGGCTCCAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASFFSSL*PWLQAS
Trigger: TGAGGCCTGGAGCCAGGGCAAGAGGGAGCTGAAGAA...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGGCACATCCCTGCCCCTaGGGAGTCTCCTGGAGTGTA +
Preference number: 3 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQAHPCP*GVSWSV
Trigger: TACACTCCAGGAGACTCCCAAGGGGCAGGGATGTGC...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp AGATGCCGCTCCAGGGAGCCCCATTTGCAGAGTGGCTaGGAGCCAGGATTCATGTCACGTCCCCAGAGCTAT +
Preference number: 3 (lower is better)
Translates to: RCRSREPHLQSG*EPGFMSRPQSY
Trigger: ATAGCTCTGGGGACGTGACATGAATCCTGGCTCTCAGCCACTCTGCAAATGGGGCTCCCTGGAGCGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GATGGACCCCTCCCTCATCTGACTCCTCTATCCCAGTaGAATGAAGGGACAAGCCAGTGGAGCAGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: DGPLPHLTPLSQ*NEGTSQWSRGP
Trigger: AGGCCCCCTGCTCCACTGGCTTGTCCCTTCATTTCACTGGGATAGAGGAGTCAGATGAGGGAGGGGTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp CCAAGCTGGAGAAGACTCCAGCAGCCTCTAACCCCATaGGGCACTGGAGGGGCCTGTAGCCCTTATCAGATG +
Preference number: 3 (lower is better)
Translates to: PSWRRLQQPLTP*GTGGACSPYQM
Trigger: CATCTGATAAGGGCTACAGGCCCCTCCAGTGCCTCATGGGGTTAGAGGCTGCTGGAGTCTTCTCCAGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp TGGTTGGGAAGGGGGCTCAAACCCCAACCCTACTACTaGCCATGCGGCTTGACACCCACTTGTTCCCTTCCA +
Preference number: 3 (lower is better)
Translates to: WLGRGLKPQPYY*PCGLTPTCSLP
Trigger: TGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCCCCTTCCCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TCTCCACAACCCCTGAGGAGCACAGGGTCTAGGTCATaGACCCCAGACAGTGCCCTTTCTCTGGCAAGTCCA +
Preference number: 3 (lower is better)
Translates to: SPQPLRSTGSRS*TPDSALSLASP
Trigger: TGGACTTGCCAGAGAAAGGGCACTGTCTGGGGTCCATGACCTAGACCCTGTGCTCCTCAGGGGTTGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CATTACCCATCACCTTTTGATGGGCAGCCCAGAGTCTaGGACCTTGAGAGAGTGGCTGCCACTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: HYPSPFDGQPRV*DLERVAATLGL
Trigger: GAGGCCCAGAGTGGCAGCCACTCTCTCAAGGTCCCAGACTCTGGGCTGCCCATCAAAAGGTGATGGGTAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp ATGGTTGTGCTTGTGCTTGTGTGTATGTGGGCAGTCTaGCCCTCCCTGCCTTTGGGGTTACCCTGCATCCCC +
Preference number: 3 (lower is better)
Translates to: MVVLVLVCMWAV*PSLPLGLPCIP
Trigger: GGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACACACAAGCACAAGCACAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CTGTGTGGGGGAGTGGGGAGGTCTGTGCTGTTCAGCTaGGGTGACAGTTACAAGGCACATGGCACATCAGTG +
Preference number: 3 (lower is better)
Translates to: LCGGVGRSVLFS*GDSYKAHGTSV
Trigger: CACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAGACCTCCCCACTCCCCCACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AGACAGGTGCCAAAGGTGGCAGGGGCCAGCACAGAATaGGACTCTTGGGTCCTGGCTTTCAGTCCACATCCT +
Preference number: 3 (lower is better)
Translates to: RQVPKVAGASTE*DSWVLAFSPHP
Trigger: AGGATGTGGACTGAAAGCCAGGACCCAAGAGTCCCATTCTGTGCTGGCCCCTGCCACCTTTGGCACCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp CGTACACCATCTCGGCCTGTGTGCTGGTGGGGAGGGTaGCCCGTATCATGGTTGTGCTTGTGCTTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: RTPSRPVCWWGG*PVSWLCLCLCV
Trigger: TACACACAAGCACAAGCACAACCATGATACGGGTCACCCTCCCCACCAGCACACAGGCCGAGATGGTGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp TTCTCCCACCTCCCGTCACCCTCGAGGCCTCGTTCCTaGGGGTGCTTAGCAGCAGAAAGAAGGAAAAGCACT +
Preference number: 3 (lower is better)
Translates to: FSHLPSPSRPRS*GCLAAERRKST
Trigger: AGTGCTTTTCCTTCTTTCTGCTGCTAAGCACCCTCAGGAACGAGGCCTCGAGGGTGACGGGAGGTGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp GGAAGGGGGCTCAAACCCCAACCCTACTACTGCCCATaGGGCTTGACACCCACTTGTTCCCTTCCATTGAGA +
Preference number: 3 (lower is better)
Translates to: GRGLKPQPYYCP*GLTPTCSLPLR
Trigger: TCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp AAAGAACCGGGTTCTGGTCTCACCCTGCCACCAACTTaGTGTGTGACCTTGGGCTGGCCATCTCCCATCTCT +
Preference number: 3 (lower is better)
Translates to: KEPGSGLTLPPT*CVTLGWPSPIS
Trigger: AGAGATGGGAGATGGCCAGCCCAAGGTCACACAGCAAGTTGGTGGCAGGGTGAGACCAGAACCCGGTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CTCACTTTCTCCTGTCTAATGGATGTGGAGGGCAGGTaGCTTAAGGAACCCTCAGGGACCCTCTGGGCTGCA +
Preference number: 3 (lower is better)
Translates to: LTFSCLMDVEGR*LKEPSGTLWAA
Trigger: TGCAGCCCAGAGGGTCCCTGAGGGTTCCTTAAGCCACCTGCCCTCCACATCCATTAGACAGGAGAAAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACCCAGCTGGGAACCAGTaGGCAGCTGAAATGTCTCAG +
Preference number: 3 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYPAGNQ*AAEMSQ
Trigger: CTGAGACATTTCAGCTGCCAACTGGTTCCCAGCTGG...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAATTCCTGGCACAAAGTaGGCCCTGGAGAAACAGTCT +
Preference number: 3 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPIPGTK*ALEKQS
Trigger: AGACTGTTTCTCCAGGGCCAACTTTGTGCCAGGAAT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GACGACAGGGAGGGGAAGAATCACTCGGAATTGTGCTaGCAGAGGGAGATTAGCCCCTCAGGCATGGCTAGT +
Preference number: 3 (lower is better)
Translates to: DDREGKNHSELC*QREISPSGMAS
Trigger: ACTAGCCATGCCTGAGGGGCTAATCTCCCTCTGTCAGCACAATTCCGAGTGATTCTTCCCCTCCCTGTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp TTGTGCTTGTGTGTATGTGGGCAGTCTGGCCCTCCCTaGCTTTGGGGTTACCCTGCATCCCCAGCAATTCAT +
Preference number: 3 (lower is better)
Translates to: LCLCVCGQSGPP*LWGYPASPAIH
Trigger: ATGAATTGCTGGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACACACAAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AGGATTCTCATGGCCCACCTCACTCCAGGATCAGGTTaGCATCTGTCCTTAACATCCGCTGCTGTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: RILMAHLTPGSG*HLSLTSAAVLS
Trigger: GGAGAGGACAGCAGCGGATGTTAAGGACAGATGCCAACCTGATCCTGGAGTGAGGTGGGCCATGAGAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAAGGGGCCACTCTACCCTaGGACCAACAGATCCACTCC +
Preference number: 3 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQGATLP*DQQIHS
Trigger: GGAGTGGATCTGTTGGTCCAAGGGTAGAGTGGCCCC...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACTCGCTATGCTCTGGATaGCAGGTTCCCCTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDSLCSG*QVPLPQ
Trigger: TTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCGA...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTAGCACTCTTGCTGTGTaGGCAGGAGGGATGATGCGT +
Preference number: 3 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTSTLAV*AGGMMR
Trigger: ACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp ACTACCTCTCATCCCCAGGGAAATCCTAACTGCCACTaGCTTCCTGTGTGGCCTTTGGTGAGTCCTTGGTCC +
Preference number: 3 (lower is better)
Translates to: TTSHPQGNPNCH*LPVWPLVSPWS
Trigger: GGACCAAGGACTCACCAAAGGCCACACAGGAAGTCAGTGGCAGTTAGGATTTCCCTGGGGATGAGAGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp GGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTaGCATATTTGGTACCCAAAGCATCCTGTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: GLLGLEVTEGRA*HIWYPKHPVLF
Trigger: GAAGAGAACAGGATGCTTTGGGTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp AATATAGAAACTACAGCTCCCCCTACCAACCTCTACTaGAGGCCCCACCACAGCTTGAACTGGGAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: NIETTAPPTNLY*RPHHSLNWEGD
Trigger: GTCTCCCTCCCAGTTCAAGCTGTGGTGGGGCCTGCAGTAGAGGTTGGTAGGGGGAGCTGTAGTTTCTATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CGTCTCCTAAGGAGTTCATTCTTGTTCGCTATGCTCTaGATTGCAGGTTCCCCTCCCCCAAGTCTTCCACCC +
Preference number: 3 (lower is better)
Translates to: RLLRSSFLFAML*IAGSPPPSLPP
Trigger: GGGTGGAAGACTTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCGAACAAGAATGAACTCCTTAGGAGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AAAGTTGGCCCTGGAGAAACAGTCTGTTTCTGGGTCTaGGTCCGCATCTTCAGAGCTCCCATCTCACAACGG +
Preference number: 3 (lower is better)
Translates to: KVGPGETVCFWV*VRIFRAPISQR
Trigger: CCGTTGTGAGATGGGAGCTCTGAAGATGCGGACCCAGACCCAGAAACAGACTGTTTCTCCAGGGCCAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TGGCACAAAGTTGGCCCTGGAGAAACAGTCTGTTTCTaGGTCTGGGTCCGCATCTTCAGAGCTCCCATCTCA +
Preference number: 3 (lower is better)
Translates to: WHKVGPGETVCF*VWVRIFRAPIS
Trigger: TGAGATGGGAGCTCTGAAGATGCGGACCCAGACCCAGAAACAGACTGTTTCTCCAGGGCCAACTTTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp GGATATTCTGGTGGGACCCTCAAAAGAACCGGGTTCTaGTCTCACCCTGCCACCAACTTGCTGTGTGACCTT +
Preference number: 3 (lower is better)
Translates to: GYSGGTLKRTGF*SHPATNLLCDL
Trigger: AAGGTCACACAGCAAGTTGGTGGCAGGGTGAGACCAGAACCCGGTTCTTTTGAGGGTCCCACCAGAATATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AATTGTGCTGACAGAGGGAGATTAGCCCCTCAGGCATaGCTAGTGATTCCTAGAGTTCCAGGGGCATGGAGG +
Preference number: 3 (lower is better)
Translates to: NCADRGRLAPQA*LVIPRVPGAWR
Trigger: CCTCCATGCCCCTGGAACTCTAGGAATCACTAGCCATGCCTGAGGGGCTAATCTCCCTCTGTCAGCACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTTACTGCCCATGCGGCTaGACACCCACTTGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPYCPCG*TPTCSL
Trigger: AAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTA...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GAAGAACCTGCAGAACTCGAGTACTTAGGAGGGTGTTaGCTGCAAGCGAGACCTTCCCTGGATATTCCCAGC +
Preference number: 3 (lower is better)
Translates to: EEPAELEYLGGC*LQARPSLDIPS
Trigger: GCTGGGAATATCCAGGGAAGGTCTCGCTTGCAGTCAACACCCTCCTAAGTACTCGAGTTCTGCAGGTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp CTATGGGAACGGTTCAGATACCTTCCAGCTATTTCATaGTGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: LWERFRYLPAIS*WVRKASGAGGY
Trigger: ATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTGGAAGGTATCTGAACCGTTCCCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp TCCAGGATCAGGTTGGCATCTGTCCTTAACATCCGCTaGTGTCCTCTCCCACCAATCACACCTAAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: SRIRLASVLNIR*CPLPPITPKLL
Trigger: CAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGCGGATGTTAAGGACAGATGCCAACCTGATCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TTTTCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTaGGATACTGGGGAGGAGAATAACTTGCCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: FSSRRQQPDGPF*DTGEENNLPRV
Trigger: CACCCTTGGCAAGTTATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp GGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTaGTACCCAAAGCATCCTGTTCTCTTCTGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GLEVTEGRACHI*YPKHPVLFCSW
Trigger: CCAGGAACAGAAGAGAACAGGATGCTTTGGGTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GGGCCTAGAGCTCCCATGAGCCCCAGAAGTCTAGAATaGGAGCACCCATTCCTAGAAAATTCCATTCACGCT +
Preference number: 3 (lower is better)
Translates to: GPRAPMSPRSLE*EHPFLENSIHA
Trigger: AGCGTGAATGGAATTTTCTAGGAATGGGTGCTCTCATTCTAGACTTCTGGGGCTCATGGGAGCTCTAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GCAGCCTTCGTCCCAGAAAACCTTCTCCCTATTGTCTaGGGCTTCTGTGGACTCCAGGTCCAGATTAATTCC +
Preference number: 3 (lower is better)
Translates to: AAFVPENLLPIV*GFCGLQVQINS
Trigger: GGAATTAATCTGGACCTGGAGTCCACAGAAGCCTCAGACAATAGGGAGAAGGTTTTCTGGGACGAAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp TGTGACCTTGGGCTGGCCATCTCCCATCTCTGGGCTTaGCCCTTCAGTAAAATAGGATGCTGGATGTCTAAA +
Preference number: 3 (lower is better)
Translates to: CDLGLAISHLWA*PFSKIGCWMSK
Trigger: TTTAGACATCCAGCATCCTATTTTACTGAAGGGGCAAGCCCAGAGATGGGAGATGGCCAGCCCAAGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp ATGAGAGCACCCATTCCTAGAAAATTCCATTCACGCTaGGCTCTAGAACCTCTTCTCCCCCACCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: MRAPIPRKFHSR*ALEPLLPHHCD
Trigger: GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAATGGGTGCTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp TGTGTGAATTCAGCCTCCAAAGATGGATTTGGAGGATaGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: CVNSASKDGFGG*MNPTEWAWVSL
Trigger: AAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CACAATGGAGACCAGGGAAAAGGGTCAGATTCGATCTaGGGGGATTTGGGTGAGAGAGAGATGGAGGAATCA +
Preference number: 3 (lower is better)
Translates to: HNGDQGKGSDSI*GDLGEREMEES
Trigger: TGATTCCTCCATCTCTCTCTCACCCAAATCCCCCCAGATCGAATCTGACCCTTTTCCCTGGTCTCCATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp GGGGGCTATGTTTATATGAGGCTCCTCCAAGTTCGGTaGTTTAGCACAATGGAGACCAGGGAAAAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: GGYVYMRLLQVR*FSTMETREKGQ
Trigger: CTGACCCTTTTCCCTGGTCTCCATTGTGCTAAACCACCGAACTTGGAGGAGCCTCATATAAACATAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTaGGGGCTATGTTTATATGAGGCTCCTCCAAGTTCG +
Preference number: 3 (lower is better)
Translates to: SYFMMGSESQWG*GLCLYEAPPSS
Trigger: CGAACTTGGAGGAGCCTCATATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTCACTCCAGGATCAGGTaGGCATCTGTCCTTAACATC +
Preference number: 3 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSHSRIR*ASVLNI
Trigger: GATGTTAAGGACAGATGCCAACCTGATCCTGGAGTG...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp AGATGGGTTGATAATACCTCTCTTGCAGGGACGTCGTaGCCAGAGGAGAGTGTAAGTGAAACGACATGGGGT +
Preference number: 3 (lower is better)
Translates to: RWVDNTSLAGTS*PEESVSETTWG
Trigger: ACCCCATGTCGTTTCACTTACACTCTCCTCTGGTCACGACGTCCCTGCAAGAGAGGTATTATCAACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp GGACTCCAGGTCCAGATTAATTCCAAGGGAAGAACCTaGAGAACTCGAGTACTTAGGAGGGTGTTGACTGCA +
Preference number: 3 (lower is better)
Translates to: GLQVQINSKGRT*RTRVLRRVLTA
Trigger: TGCAGTCAACACCCTCCTAAGTACTCGAGTTCTGCAGGTTCTTCCCTTGGAATTAATCTGGACCTGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp TCCCATCTCTGGGCTTGCCCCTTCAGTAAAATAGGATaGTGGATGTCTAAACCATTGATTCCCAACGTGGGG +
Preference number: 3 (lower is better)
Translates to: SHLWACPFSKIG*WMSKPLIPNVG
Trigger: CCCCACGTTGGGAATCAATGGTTTAGACATCCAGCATCCTATTTTACTGAAGGGGCAAGCCCAGAGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp CAGGATGTTCAGGCCATGGGAATAGACCACAGGTCCTaGGGAGTCATCAGATCTAAGGCAAAACAAGTCAGT +
Preference number: 3 (lower is better)
Translates to: QDVQAMGIDHRS*GVIRSKAKQVS
Trigger: ACTGACTTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGCCTGAACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp GCCCAGAGATCTTTCCAGACATCTTATCTGCTGTGTTaGAGACCTGTATCTAGAAGCCACGTTCCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: AQRSFQTSYLLC*RPVSRSHVPGA
Trigger: TGCACCTGGAACGTGGCTTCTAGATACAGGTCTTCAACACAGCAGATAAGATGTCTGGAAAGATCTCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CCA 72 bp AAGCATCCCTCTAATTTGCATAGTCTAGGATTCTCATaGCCCACCTCACTCCAGGATCAGGTTGGCATCTGT +
Preference number: 3 (lower is better)
Translates to: KHPSNLHSLGFS*PTSLQDQVGIC
Trigger: ACAGATGCCAACCTGATCCTGGAGTGAGGTGGGCCATGAGAATCCTAGACTATGCAAATTAGAGGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp ATCTTCAGAGCTCCCATCTCACAACGGCTTTGTGTGTaGATTCAGCCTCCAAAGATGGATTTGGAGGATGGA +
Preference number: 3 (lower is better)
Translates to: IFRAPISQRLCV*IQPPKMDLEDG
Trigger: TCCATCCTCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGTTGTGAGATGGGAGCTCTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR GCA 72 bp GCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTaGTGTGTTGAAGACCTGTATCTAGAAGCCACGTTC +
Preference number: 3 (lower is better)
Translates to: ALEPRDLSRHLI*CVEDLYLEATF
Trigger: GAACGTGGCTTCTAGATACAGGTCTTCAACACAGCAGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR-3UTR CAA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTAACCTTCTCAACATTTaGAACCGTAAGTCTCAAACT +
Preference number: 3 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPNLLNI*NRKSQT
Trigger: AGTTTGAGACTTACGGTTCAAAATGTTGAGAAGGTT...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp TCTCCATTACTCTTAGTTTCATTATCTCGAGGCATTTaGGTTTGCATCCCATGCAGCCTTCGTCCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: SPLLLVSLSRGI*VCIPCSLRPRK
Trigger: TTTTCTGGGACGAAGGCTGCATGGGATGCAAACTCAAATGCCTCGAGATAATGAAACTAAGAGTAATGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR TCA 72 bp AATACATATATTCCCCCACCTTCAAGCCCTAGAAGTTaGCTTGAGGCCTTAGAAACATTTATCTGCAATCAG +
Preference number: 3 (lower is better)
Translates to: NTYIPPPSSPRS*LEALETFICNQ
Trigger: CTGATTGCAGATAAATGTTTCTAAGGCCTCAAGTCAACTTCTAGGGCTTGAAGGTGGGGGAATATATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTCAAGGTGCGGGCCACTaGTGTGGGAGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCQGAGH*CGRQAR
Trigger: CCTGGCTTGCCTCCCACACCAGTGGCCCGCACCTTG...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGACGCGGGCGGCAATGCTaGACAGGTGCCACAGCACCT +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRRGRQC*TGATAP
Trigger: AGGTGCTGTGGCACCTGTTCAGCATTGCCGCCCGCG...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCCGGGGCGTGGCAGGTaGGGAGTACTCCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCPGRGR*GVLQCQ
Trigger: CTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGACCCACACTCCGGTACTaGAACCGGGGCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRPTLRY*NRGVAG
Trigger: ACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGG...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCAAGCCAGGCCGCACCTaGAAGACAGGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISKPGRT*KTGGVG
Trigger: CCCCACCCCACCTGTCTTCCAGGTGCGGCCTGGCTT...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCGCTGTCCTTGGTGCTaGCGGCGGGTCCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASRCPWC*RRVPGT
Trigger: GGTCCCCGGGACCCGCCGTCAGCACCAAGGACAGCG...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGTGCACCAGCAGGCTaGGCTGCAGCACTAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCGAPAG*AAALAA
Trigger: CGCAGCTAGTGCTGCAGCTCAGCCTGCTGGTGCACC...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAAGTACCAGAAGCCGGTaGGCGCGGCGTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRSTRSR*ARRSPA
Trigger: TGCTGGAGAACGCCGCGCTCACCGGCTTCTGGTACT...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGACCCGGCTCGGGGCTaGCTTCTTTGGTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCDPARG*LLWSGR
Trigger: CCTTCCGGACCAAAGAAGGCAGCCCCGAGCCGGGTC...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCCCAGCAAGCGCAGCATaGTCACGTCGGCGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISPASAA*SRRRSR
Trigger: TCGAGAGCGCCGACGTGAGCATGCTGCGCTTGCTGG...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACATGGGGTGGGGGTCCCTaGACGCTCTCCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTWGGGP*TLSRRG
Trigger: GCCTCGGCGGGAGAGCGTGCAGGGACCCCCACCCCA...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCTGGGAGGAGGGGCCCTaGGTGAGTCCCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPWEEGP*VSPLGT
Trigger: AGTGCCCAGGGGACTCACCCAGGGCCCCTCCTCCCA...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTTGTATGTGGGCAGTCTaGCCCTCCCTGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCCMWAV*PSLPLG
Trigger: CCCCAAAGGCAGGGAGGGCCAGACTGCCCACATACA...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGACAGGGGCCCCCAAGCTaGAGAAGACTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRQGPPS*RRLQQP
Trigger: AGGCTGCTGGAGTCTTCTCCAGCTTGGGGGCCCCTG...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAGGCTGCCCCCTCCCCTaGAAGAACCCAAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQGCPLP*KNPRVG
Trigger: CCCCACTCTTGGGTTCTTTCAGGGGAGGGGGCAGCC...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACAGACCTGGCCGAGCTaGAGGAGGTGGACGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQQTWPS*RRWTRV
Trigger: GACCCTCGTCCACCTCCTGCAGCTCGGCCAGGTCTG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGACCATGCCAAGCCCTaGCAGCACATCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCDHAKP*QHIPAP
Trigger: AGGGGCAGGGATGTGCTGGCAGGGCTTGGCATGGTC...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAGGGACCTTGAGAGAGTaGCTGCCACTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRGTLRE*LPLWAS
Trigger: TGAGGCCCAGAGTGGCAGCCACTCTCTCAAGGTCCC...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAGGGCAGCCCAGAGTCTaGGACCTTGAGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRGQPRV*DLERVA
Trigger: AGCCACTCTCTCAAGGTCCCAGACTCTGGGCTGCCC...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGCCCACCCATTCAGCCTaGCCAGGGGTGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGPTHSA*PGVPLQ
Trigger: CTGCAAGGGCACCCCTGGCCAGGCTGAATGGGTGGG...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAAAGTGTAGCACCAGATaGTTCCCCAGGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRKCSTR*FPRPWV
Trigger: GACCCAGGGCCTGGGGAATCATCTGGTGCTACACTT...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAGGGGTTAGAGGTAACTaGGGGCAGGGCCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRGVRGN*GQGLPY
Trigger: ATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCC...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTTCTTCAGCTCCCTCTTaGCCTGGCTCCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCSSAPS*PGSRPQ
Trigger: CTGAGGCCTGGAGCCAGGGCAAGAGGGAGCTGAAGA...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCTCTTCCACCCCTCCATaGTTCTGCCAGCCTAGACCC +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISSSTPP*FCQPRP
Trigger: GGGTCTAGGCTGGCAGAAGCATGGAGGGGTGGAAGA...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCAGTCTGGCCCTCCCTaGCTTTGGGGTTACCCTGCA +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCQSGPP*LWGYPA
Trigger: TGCAGGGTAACCCCAAAGGCAGGGAGGGCCAGACTG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACTGCCAGCACATCCCTaGCCCTTGGGAGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQLPAHP*PLGVSW
Trigger: CCAGGAGACTCCCAAGGGGCAGGGATGTGCTGGCAG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCCCTGTGTGGGGGAGTaGGGAGGTCTGTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCPCVGE*GGLCCS
Trigger: TGAACAGCACAGACCTCCCCACTCCCCCACACAGGG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTCAGCTGAGAGGGCAGTaGGCTCAGTTCTCAGATAGC +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCQLRGQ*AQFSDS
Trigger: GCTATCTGAGAACTGAGCCCACTGCCCTCTCAGCTG...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTGATTTGGAGGATGGATaGACCCAACAGAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCDLEDG*TQQSGP
Trigger: AGGCCCACTCTGTTGGGTTCATCCATCCTCCAAATC...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATTGCCAGGAGGCGCCGTaGTGTGGGTGTGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENCQEAP*CGCVWC
Trigger: GCACCACACACACCCACATCACGGCGCCTCCTGGCA...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTTACTTAGGAGGGTGTTaGCTGCAAGCGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCYLGGC*LQARPS
Trigger: GGAAGGTCTCGCTTGCAGTCAACACCCTCCTAAGTA...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGTCTGCAGCAGCCAGATaGAGAGGCGGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVSAAAR*RGGSSG
Trigger: GCCGCTGCTGCCGCCTCTGCATCTGGCTGCTGCAGA...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCTAGCTGCGGCGCGCTaGGCAGGAAGGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQLAAAR*AGRSPA
Trigger: TGCTGGAGACCTTCCTGCGCAGCGCGCCGCAGCTAG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAATTCGGGGCACAACACTaGGGCGGATGTGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQFGAQH*GGCGIS
Trigger: GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAA...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGGCTCCAGGCCTCAGATaGTACAGGAGCCACGCCATC +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGAPGLR*YRSHAI
Trigger: GATGGCGTGGCTCCTGTAGCATCTGAGGCCTGGAGC...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAGGTGTGTGTGGTGCCTaGAGAGGTTTGGGGAACACA +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRGVCGA*RGLGNT
Trigger: TGTGTTCCCCAAACCTCTGCAGGCACCACACACACC...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCCTGGGGACCCAGCATaGGCCCATTGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQPGDPA*AHWGAG
Trigger: TCCTGCACCCCAATGGGCCCATGCTGGGTCCCCAGG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATGGAAGACAGGTGGGGTaGGGGTCCCTGCACGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENGRQVG*GSLHAL
Trigger: GAGAGCGTGCAGGGACCCCCACCCCACCTGTCTTCC...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAACACTGCGGCGGATGTaGGATCAGCCAAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQTLRRM*DQPSLS
Trigger: GGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGT...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGCCACTCTACCCTTaGACCAACAGATCCACTCCC +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCGPLYP*TNRSTP
Trigger: GGGAGTGGATCTGTTGGTCCAAGGGTAGAGTGGCCC...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCCCTCAGGGACCCTCTaGGCTGCAAGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQPSGTL*AARTLA
Trigger: TGCCAGGGTCCTTGCAGCCCAGAGGGTCCCTGAGGG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAAGAGTTCCAGGGGCATaGAGGGGAGGATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQRVPGA*RGGSGL
Trigger: CAGCCCTGATCCTCCCCTCCATGCCCCTGGAACTCT...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGACGAGTAGAAGTCGGTTaGGAAGTTGCGGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRRVEVG*EVAAGV
Trigger: TACTCCAGCCGCAACTTCTCAACCGACTTCTACTCG...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAACCCGACTCTCATGGGTaGCATGCCTCTGTGGGACAC +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKPDSHG*HASVGH
Trigger: GTGTCCCACAGAGGCATGTCACCCATGAGAGTCGGG...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCCTTCTCCCTATTGTCTaGGGCTTCTGTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISLLPIV*GFCGLQ
Trigger: CTGGAGTCCACAGAAGCCTCAGACAATAGGGAGAAG...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGGGAAGCTCGGAGGGTaGATGGGGGTCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTGKLGG*MGVRGM
Trigger: CATCCCCCTGACCCCCATTCACCCTCCGAGCTTCCC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAACGGAAGCTCAGTAACTaGACGACCAGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKRKLSN*TTSEGR
Trigger: CCTGCCCTCGCTGGTCGTGCAGTTACTGAGCTTCCG...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCAGGTGGACGAGGGTCTaGAGCAGCCAGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLRWTRV*SSQMQR
Trigger: CCTCTGCATCTGGCTGCTGCAGACCCTCGTCCACCT...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCCCGCGCCAGCGGCTCTaGAGCCCCAGGTACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISPRQRL*SPRYRA
Trigger: CGCCCTGTACCTGGGGCTGCAGAGCCGCTGGCGCGG...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAAGTCGGTTGAGAAGTTaGGGCTGGAGTACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQMSLQAEALREGCVGLRSRLRS*GWSTRS
Trigger: GCTTCTGGTACTCCAGCCGCAACTTCTCAACCGACT...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTGCAGGAGGAGGTGCCTaGAGCCCTCTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSAGGGA*SPLPGP
Trigger: GGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCCTGC...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTACCAACCTCTACTaGAGGCCCCACCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQPTNLY*RPHHSL
Trigger: CAAGCTGTGGTGGGGCCTGCAGTAGAGGTTGGTAGG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCACCCTGCCACCAACTTaGTGTGTGACCTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPTLPPT*CVTLGW
Trigger: CCAGCCCAAGGTCACACAGCAAGTTGGTGGCAGGGT...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACCGGGGCTGCCTTCTTTaGTCCGGAAGGCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHRGCLL*SGRRRR
Trigger: GCGCCGGCGCCTTCCGGACCAAAGAAGGCAGCCCCG...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCAACGGGGCCCAGGGCTaGGGCCTCCGCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISNGAQG*GLRKAA
Trigger: GGCAGCCTTGCGGAGGCCCCAGCCCTGGGCCCCGTT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAGTGCTTGTGTGTATGTaGGCAGTCTGGCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQVLVCM*AVWPSL
Trigger: CAGGGAGGGCCAGACTGCCCACATACACACAAGCAC...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCACTGGTCCCGAGCTCCTaGGTGGAGAGTCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPLVPSS*VESPLR
Trigger: CCTTAAAGGACTCTCCACCCAGGAGCTCGGGACCAG...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAGGTGACATGCCTCTGTaGGACACAGGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQGDMPL*DTGVAG
Trigger: CCCTGCTACACCTGTGTCCCACAGAGGCATGTCACC...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTTCCACATCCTGCACCTaGACTCCCCTGCAACCCAAT +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCSTSCT*TPLQPN
Trigger: ATTGGGTTGCAGGGGAGTCCAGGTGCAGGATGTGGA...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAAAACCAGGCCAGGCCTaGACAGGGCCTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQKPGQA*TGPSFS
Trigger: GGAAAAGGAAGGCCCTGTCCAGGCCTGGCCTGGTTT...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACGCTGTCCTTGGTGCTaGTGGCGGCTCCGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQRCPWC*WRLRRL
Trigger: TAGCCGGCGGAGCCGCCATCAGCACCAAGGACAGCG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACGCAAGTCAATCCGGATaGCAGGCCCCTCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYASQSG*QAPLSA
Trigger: TGCGGACAGAGGGGCCTGTCATCCGGATTGACTTGC...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCACTCTCCACAACCCCTaGGGAGCACAGGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLTLHNP*GAQGLG
Trigger: ACCTAGACCCTGTGCTCCTCAGGGGTTGTGGAGAGT...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCACTCCTCTATCCCAGTaGAATGAAGGGACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISTPLSQ*NEGTSQ
Trigger: CTGGCTTGTCCCTTCATTTCACTGGGATAGAGGAGT...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCACACGTGGGCCAAATATaGGTGGCCAGCAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPHVGQI*VASSFP
Trigger: TGGGAAACTGCTGGCCACTCATATTTGGCCCACGTG...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACGGGTCCCGGGGACCCTaGGGGCTCCGAGTAGTCGTA +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHGSRGP*GLRVVV
Trigger: TACGACTACTCGGAGCCCGCAGGGTCCCCGGGACCC...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTAGTGGTAGAGGGTCATaGGGCGGCGGCTGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSSGRGS*GGGCGP
Trigger: AGGGCCGCAGCCGCCGCCGCATGACCCTCTACCACT...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCATGGACCCCAGACAGTaGCCTTTCTCTGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPMDPRQ*PFSGKS
Trigger: GGACTTGCCAGAGAAAGGGCACTGTCTGGGGTCCAT...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTCATTCTTGTTCGCTATaGTCTGGATTGCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCHSCSL*SGLQVP
Trigger: GGGAACCTGCAATCCAGAGCATAGCGAACAAGAATG...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACTCACCCCATGGAACTaGCTACTTCCCCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQLTPWN*LLPLSH
Trigger: ATGGGAGAGGGGAAGTAGGCAGTTCCATGGGGTGAG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGCCCTACTACTGCCCATaGGGCTTGACACCCACTTGT +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGPYYCP*GLTPTC
Trigger: ACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGG...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACCAGCCTGGCCAGGGGTaGCCTTGCAGTGGTTATGCA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYQPGQG*PCSGYA
Trigger: TGCATAACCACTGCAAGGGCACCCCTGGCCAGGCTG...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTCACCTGGAAGACAGGTaGGGTGGGGGTCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPHLEDR*GGGPCT
Trigger: CGTGCAGGGACCCCCACCCCACCTGTCTTCCAGGTG...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTTTAGAAAGATGGCTATaGACCAAGGTAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCLERWL*TKVTGA
Trigger: GGCCCCTGTTACCTTGGTCCATAGCCATCTTTCTAA...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACACCAACAGAGTGGGCCTaGGTCAGCCTTGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTPTEWA*VSLGLL
Trigger: GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGG...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCATGAACCCAACAGAGTaGGCCTGGGTCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLMNPTE*AWVSLG
Trigger: CCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCAT...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAACCTTATCCAGAGGCCTaGACTTTCCCCAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKPYPEA*TFPRPH
Trigger: GTGAGGCCTGGGGAAAGTCCAGGCCTCTGGATAAGG...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCGACAGGTGCCAAAGGTaGCAGGGGCCAGCACAGAAT +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLDRCQR*QGPAQN
Trigger: ATTCTGTGCTGGCCCCTGCCACCTTTGGCACCTGTC...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGAGAAGCCTCTATGGTTaGGAAGGGGGCTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGRSLYG*EGGSNP
Trigger: GGGGTTTGAGCCCCCTTCCCAACCATAGAGGCTTCT...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAGGTTCGGAAAGCCAGTaGGGCTGGGGGCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQGSESQ*GWGLCL
Trigger: TAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACC...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGCCATCTCCCATCTCTaGGCTTGCCCCTTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCAISHL*ACPFSK
Trigger: TTTACTGAAGGGGCAAGCCCAGAGATGGGAGATGGC...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACGGGGAGGATCAGGGCTaGGGATATTCTGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYGEDQG*GYSGGT
Trigger: GGTCCCACCAGAATATCCCCAGCCCTGATCCTCCCC...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTTTAGCCCCTCAGGCATaGCTAGTGATTCCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCLAPQA*LVIPRV
Trigger: AACTCTAGGAATCACTAGCCATGCCTGAGGGGCTAA...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGCGGCGGTCAATAAAATaGGCATCCCAGGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVRRSIK*ASQAGY
Trigger: GTACCCGGCCTGGGATGCTCATTTTATTGACCGCCG...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCTTATCTCGAGGCATTTaGGTTTGCATCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISLSRGI*VCIPCS
Trigger: GCTGCATGGGATGCAAACTCAAATGCCTCGAGATAA...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTTCTCAGATAGCCAGGTaGTGGGGATTTAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCSQIAR*WGFRVG
Trigger: TCCAACCCTAAATCCCCATCACCTGGCTATCTGAGA...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACCAGCCTCTAACCCCATaGGGCACTGGAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDQPLTP*GTGGAC
Trigger: ACAGGCCCCTCCAGTGCCTCATGGGGTTAGAGGCTG...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATACTGCCCATGCGGCTTaGCACCCACTTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENTAHAA*HPLVPF
Trigger: GAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGT...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAACCAGAATGGCACATTaGAGCTCCTTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPTRMAH*SSFPPQ
Trigger: CTGGGGAGGAAAGGAGCTTCAATGTGCCATTCTGGT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGGCAATGCTGAACAGGTaGCACAGCACCTGTGCCACG +
Preference number: 4 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVAMLNR*HSTCAT
Trigger: CGTGGCACAGGTGCTGTGGCACCTGTTCAGCATTGC...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGAAGATGCAACCAGGTaGCTGGGGACCCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTEDATR*LGTQHG
Trigger: CCCATGCTGGGTCCCCAGGCACCTGGTTGCATCTTC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAACTGAGGGCAGGGCCTaGCATATTTGGTACCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPTEGRA*HIWYPK
Trigger: CTTTGGGTACCAAATATGGCAGGCCCTGCCCTCAGT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTCGAGGGAGGCGGAGGTaGAGAGGGCCGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSRGRRR*RGPAAG
Trigger: ACCTGCTGCCGGCCCTCTCCACCTCCGCCTCCCTCG...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGAAGTCCGTCTCCCCTTaGATGACCCAGAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGKSVSP*MTQKVM
Trigger: CATGACCTTCTGGGTCATCCAAGGGGAGACGGACTT...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCCAGCATGGGCCCATTaGGGTGCAGGAGACAGTAGT +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQPAWAH*GAGDSS
Trigger: ACTACTGTCTCCTGCACCCCAATGGGCCCATGCTGG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTATGCAACCAGGTGCCTaGGGACCCAGCATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPMQPGA*GPSMGP
Trigger: TGGGCCCATGCTGGGTCCCCAGGCACCTGGTTGCAT...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTGCGGGCCACTGGTGTaGGAGGCAAGCCAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEICGPLV*EASQAA
Trigger: TGCGGCCTGGCTTGCCTCCCACACCAGTGGCCCGCA...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTACTGCAACCGGGGCGTaGCAGGTGAGGAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTTATGA*QVRSTP
Trigger: TGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCGCCCCATTTGCAGAGTaGCTGAGAGCCAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPAPFAE*LRARIH
Trigger: ATGAATCCTGGCTCTCAGCCACTCTGCAAATGGGGC...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACGGCCCTCCCTGCCTTTaGGGTTACCCTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDGPPCL*GYPASP
Trigger: TGGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCC...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGAAGGGACAAGCCAGTaGAGCAGGGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIEGTSQ*SRGPQA
Trigger: GGCCTGAGGCCCCCTGCTCCACTGGCTTGTCCCTTC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGACTGAACATCCAGACTaGGGTGGGGGTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVTEHPD*GGGQGT
Trigger: TGTCCCCTGACCCCCACCCCAGTCTGGATGTTCAGT...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAAGTGCCTGCAGAGGTTTaGGGAACACAGTCAACAGCG +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKVPAEV*GTQSTA
Trigger: CGCTGTTGACTGTGTTCCCCAAACCTCTGCAGGCAC...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACAGGTGTAGCAGGGAGCTaGCTGGGGGTAAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTGVAGS*LGVRQI
Trigger: AATCTGCCTTACCCCCAGCCAGCTCCCTGCTACACC...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGGGGCCAGCACAGAATaGGACTCTTGGGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTGASTE*DSWVLA
Trigger: AGCCAGGACCCAAGAGTCCCATTCTGTGCTGGCCCC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCACTGGGGATATTCTGGTaGGACCCTCAAAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPLGIFW*DPQKNR
Trigger: CCGGTTCTTTTGAGGGTCCCACCAGAATATCCCCAG...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp GGGCTCAAACCCCAACCCTACTACTGCCCATGCGGCTaGACACCCACTTGTTCCCTTCCATTGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: GLKPQPYYCPCG*TPTCSLPLRHC
Trigger: GCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGGTTTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp CCTCTTTGTCCCAGGATACCCTCCATTCTGAGATTATaGCAGGTGCCCTGGGACCCCCACCCATTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLCPRIPSILRL*QVPWDPHPFSL
Trigger: CAGGCTGAATGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGGACAAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTCAGAGTCTGGGACCTTaGGAGAGTGGCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTQSLGP*ESGCHS
Trigger: AGAGTGGCAGCCACTCTCTCAAGGTCCCAGACTCTG...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAAAGGGGAGAGACTGGCTaGGGTAGATTGTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKRGETG*GRLCHR
Trigger: TCTGTGACACAATCTACCTCAGCCAGTCTCTCCCCT...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAAATCCTAACTGCCACTaGCTTCCTGTGTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQNPNCH*LPVWPL
Trigger: CAAAGGCCACACAGGAAGTCAGTGGCAGTTAGGATT...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACAGGCCGGGTACTTCTTaGGAGGCAAGTCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYRPGTS*EASQSG
Trigger: TCCGGATTGACTTGCCTCGCAAGAAGTACCCGGCCT...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTGCGAGCCTCAGACCATaGCAAGCCCTGCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPASLRP*QALPAH
Trigger: ATGTGCTGGCAGGGCTTGGCATGGTCTGAGGCTCGC...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACCTCTCATGGGTGACATaGCTCTGTGGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYLSWVT*LCGTQV
Trigger: CACCTGTGTCCCACAGAGGCATGTCACCCATGAGAG...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACTGCCCAGCGCAAAGCTaGAGGCCACTACGCAGACCA +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDCPAQS*RPLRRP
Trigger: TGGTCTGCGTAGTGGCCTCCAGCTTTGCGCTGGGCA...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATAGCAGGGGCAACACATaGGCAACGCCAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNSRGNT*ATPGRG
Trigger: TCCCCTGCCTGGCGTTGCCCATGTGTTGCCCCTGCT...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCGAAACAGTCTGTTTCTaGGTCTGGGTCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPETVCF*VWVRIF
Trigger: GAAGATGCGGACCCAGACCCAGAAACAGACTGTTTC...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCATTCCTGGCACAAAGTTaGCCCTGGAGAAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPFLAQS*PWRNSL
Trigger: CAGACTGTTTCTCCAGGGCCAACTTTGTGCCAGGAA...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTTGGGCCAAATATGAGTaGCCAGCAGTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCWAKYE*PAVSQT
Trigger: TGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCA...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATCACCACAGCTTGAACTaGGAGGGAGACAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENHHSLN*EGDRCQ
Trigger: TTGGCACCTGTCTCCCTCCCAGTTCAAGCTGTGGTG...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTTTATTGCAGGTGCCCTaGGACCCCCACCCATTCAGC +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTLLQVP*DPHPFS
Trigger: GCTGAATGGGTGGGGGTCCCAGGGCACCTGCAATAA...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCGTAAATACCAGGAGGTaGGACCAGGAAAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: SLVALKFGAQHCGGCGISVNTRR*DQEKET
Trigger: TGTTTCCTTTTCCTGGTCCCACCTCCTGGTATTTAC...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp GATGGGCCATTCTGGGATACTGGGGAGGAGAATAACTaGCCAAGGGTGACCCTCATGCTACATCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DGPFWDTGEENN*PRVTLMLHLWA
Trigger: GGCCCAGAGATGTAGCATGAGGGTCACCCTTGGCAAGTTATTCTCCTCCCCAGTATCCCAGAATGGCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAAGCAGAAGATGTAGATaGTGCCCACGACCATGTTGT +
Preference number: 4 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPSRRCR*CPRPCC
Trigger: ACAACATGGTCGTGGGCATCATCTACATCTTCTGCT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATATGGGCCACAGGGCTCTaGGGCCTTACGGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIWATGL*GLTEDA
Trigger: TGCATCTTCCGTAAGGCCTCAGAGCCCTGTGGCCCA...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTCTCCCCCACCACTGTaGCAGGTGCTAGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNSPPPL*QVLESP
Trigger: GGGGGATTCTAGCACCTGTCACAGTGGTGGGGGAGA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGCTGTTCAGCTGGGGTaGCAGTTACAAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTAVQLG*QLQGTW
Trigger: CCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCGGCCCCACCACAGCTTaGACTGGGAGGGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEIGPTTA*TGRETG
Trigger: ACCTGTCTCCCTCCCAGTTCAAGCTGTGGTGGGGCC...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCTTGTTCCCTTCCATTaGGACACTGCAAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCLVPFH*DTAKHF
Trigger: AAAGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAAAAAGGCCAGGGTTGCTaGGGAGAGGGCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQKGQGC*GEGSLL
Trigger: GAGAAGGCTGCCCTCTCCTCAGCAACCCTGGCCTTT...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTCACCAACTTGCTGTGTaGCCTTGGGCTGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPHQLAV*PWAGHL
Trigger: GAGATGGCCAGCCCAAGGTCACACAGCAAGTTGGTG...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATAGAAGAGGACAGGGGTaGGGGCCCGTTAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNRRGQG*GPVREE
Trigger: TTCCTCCCTAACGGGCCCTCACCCCTGTCCTCTTCT...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACCGCTATGCTCTGGATTaGAGGTTCCCCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDRYALD*RFPSPK
Trigger: CTTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCG...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTCCCGTATCATGGTTGTaGTTGTGCTTGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCPVSWL*LCLCVC
Trigger: ACATACACACAAGCACAAGCACAACCATGATACGGG...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACTGTGGCCATTCCTGTaGCCAGATGTCCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQLWPFL*PDVPAG
Trigger: GCCTGCAGGGACATCTGGGCACAGGAATGGCCACAG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACAGGCCTCACCTTCCCTaGCCTCTGTCTTTCCCGACT +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDRPHLP*PLSFPT
Trigger: AGTCGGGAAAGACAGAGGGCAGGGAAGGTGAGGCCT...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATACCCCAACCCTACTACTaGCCATGCGGCTTGACACCC +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIPQPYY*PCGLTP
Trigger: GGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGGGG...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAAGAAGGCAGGAATGAGTaGCCACAAGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQEGRNE*PQVLLR
Trigger: TCTCAAAAGCACTTGTGGGCACTCATTCCTGCCTTC...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATACCAGCCACAGGTCCGTaGCACCGTCGGAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIPATGP*HRRRRT
Trigger: TGTTCTTCTCCGACGGTGCCACGGACCTGTGGCTGG...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTACAGGGTCTAGGTCATaGACCCCAGACAGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTTGSRS*TPDSAL
Trigger: AAGGGCACTGTCTGGGGTCCATGACCTAGACCCTGT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGGATGGATTTGGAGGATaGATGAACCCAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGDGFGG*MNPTEW
Trigger: CCACTCTGTTGGGTTCATCCATCCTCCAAATCCATC...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGGCACAAAGTTGGCCCTaGAGAAACAGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGAQSWP*RNSLFL
Trigger: CAGAAACAGACTGTTTCTCCAGGGCCAACTTTGTGC...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACGATGTGGAGGGCAGGTaGCTTAAGGAACCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDDVEGR*LKEPSG
Trigger: CCCTGAGGGTTCCTTAAGCCACCTGCCCTCCACATC...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCGGAGGCGCCGTGATGTaGGTGTGTGTGGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEIGGAVM*VCVVPA
Trigger: TGCAGGCACCACACACACCCACATCACGGCGCCTCC...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAATCTGTGCTGTTCAGCTaGGGTGACAGTTACAAGGCA +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKSVLFS*GDSYKA
Trigger: TGCCTTGTAACTGTCACCCCAGCTGAACAGCACAGA...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTGGGTCAGATTCGATCTaGGGGGATTTGGGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASGSDSI*GDLGER
Trigger: TCTCTCACCCAAATCCCCCCAGATCGAATCTGACCC...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACAGGGGGATGAGGGATaGCACAGATGTAGTAAATAC +
Preference number: 4 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQQGDEG*HRCSKY
Trigger: GTATTTACTACATCTGTGCCATCCCTCATCCCCCTG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTTTAGCCTGGTGGCCCTaGAATTCGGGGCACAACACT +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPLAWWP*NSGHNT
Trigger: AGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCTAA...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTTGTTGGCAGGAGGGATaGTGCGTACACCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSCWQEG*CVHHLG
Trigger: GCCGAGATGGTGTACGCATCATCCCTCCTGCCAACA...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATCTGTGTGGCCTTTGGTaGGTCCTTGGTCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNLCGLW*VLGPLW
Trigger: CCAGAGAGGACCAAGGACTCACCAAAGGCCACACAG...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCGTCCCTGACTTCCGCTaGGGGGTTTCCACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISVPDFR*GVSTWQ
Trigger: CTGCCAAGTGGAAACCCCTCAGCGGAAGTCAGGGAC...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACAGGGGCTATGTTTATATaGGGCTCCTCCAAGTTCGGT +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTGAMFI*GSSKFG
Trigger: ACCGAACTTGGAGGAGCCTCATATAAACATAGCCCC...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTGTGCCACAGCACCTGTaGCACGGCGCCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSVPQHL*HGALVG
Trigger: TCCTACAAGGGCGCCGTGGCACAGGTGCTGTGGCAC...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAAGGCCTTACGGAAGATaGAACCAGGTGCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIRPYGR*NQVPGD
Trigger: GTCCCCAGGCACCTGGTTGCATCTTCCGTAAGGCCT...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCCAATCACACCTAAGTTaGTGTGGGAGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLQSHLS*CGSVCV
Trigger: CACACACACACTCCCACAGCAACTTAGGTGTGATTG...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCTCCAAGGGAAGAACCTaGAGAACTCGAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLSKGRT*RTRVLR
Trigger: CCTAAGTACTCGAGTTCTGCAGGTTCTTCCCTTGGA...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACAGAGCTTGTAGACGCTaGCGAAGAGCGCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHRACRR*RRARRP
Trigger: TGGCCTTCGCGCTCTTCGCCAGCGTCTACAAGCTCT...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGAAAGAACCCAAGAGTaGGGCCACTCTACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTERTQE*GHSTLG
Trigger: TCCAAGGGTAGAGTGGCCCCACTCTTGGGTTCTTTC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACAGGGGAATTTAGGGAATaGGCCACAAGGCTGAAAACG +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTGEFRE*ATRLKT
Trigger: CGTTTTCAGCCTTGTGGCCCATTCCCTAAATTCCCC...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACTGGGGTGAAAATTCCTaGCACAAAGTTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYWGENS*HKVGPG
Trigger: TCCAGGGCCAACTTTGTGCCAGGAATTTTCACCCCA...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACTGGAGATGGGGACACTaGTCTCCTGGGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDWRWGH*SPGVRG
Trigger: ACCTCTAACCCCAGGAGACCAGTGTCCCCATCTCCA...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGGGGGTAAGGCAGATTTaGGGGAGACACAAGAATGAG +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQGVRQI*GRHKNE
Trigger: CTCATTCTTGTGTCTCCCCCAAATCTGCCTTACCCC...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTCAAACTGGTGGCACGTaGGCCAAATATGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTQTGGT*AKYEWP
Trigger: TGGCCACTCATATTTGGCCCACGTGCCACCAGTTTG...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACACAGAATGGGACTCTTaGGTCCTGGCTTTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYTEWDS*VLAFSP
Trigger: TGGACTGAAAGCCAGGACCCAAGAGTCCCATTCTGT...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACATCTCAGAAGCCTCTATaGTTGGGAAGGGGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTSQKPL*LGRGLK
Trigger: TTTGAGCCCCCTTCCCAACCATAGAGGCTTCTGAGA...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAATCTCCCCAACCAGAATaGCACATTGAAGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKSPQPE*HIEAPF
Trigger: GAAAGGAGCTTCAATGTGCCATTCTGGTTGGGGAGA...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGTGGGTGAGAGAGAGATaGAGGAATCACCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQWVRER*RNHLFP
Trigger: GGGGAAAAGGTGATTCCTCCATCTCTCTCTCACCCA...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATGGTGGTTTAGCACAATaGAGACCAGGGAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENGGLAQ*RPGKRV
Trigger: GACCCTTTTCCCTGGTCTCCATTGTGCTAAACCACC...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCATTCCTGTGCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTATAATGAGGGAGCTATaGGAACGGTTCAGATACCTT +
Preference number: 4 (lower is better)
Translates to: PFLCPDVPAGRSPEGRVCIMREL*ERFRYL
Trigger: AAGGTATCTGAACCGTTCCCATAGCTCCCTCATTAT...ACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGCACAGGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp CCCTTCAGTAAAATAGGATGCTGGATGTCTAAACCATaGATTCCCAACGTGGGGTCCCAGACCCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PFSKIGCWMSKP*IPNVGSQTLRA
Trigger: GGCCCTCAGGGTCTGGGACCCCACGTTGGGAATCAATGGTTTAGACATCCAGCATCCTATTTTACTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGCCCAGAAGTCTAGAATaGGAGCACCCATTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVPRSLE*EHPFLE
Trigger: TTCTAGGAATGGGTGCTCTCATTCTAGACTTCTGGG...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTCGAGGCCTCGTTCCTaGGGGTGCTTAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEISRPRS*GCLAAE
Trigger: TTCTGCTGCTAAGCACCCTCAGGAACGAGGCCTCGA...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCAACGGCTTTGTGTGTaGATTCAGCCTCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASQRLCV*IQPPKM
Trigger: CATCTTTGGAGGCTGAATTCACACACAAAGCCGTTG...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTATTTCCCTTTTCAGCTaGGAGGGCAGTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPISLFS*EGSGLS
Trigger: ACTGAGCCCACTGCCCTCTCAGCTGAAAAGGGAAAT...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACATGGGGTCCCAGACCCTaGGGGCCTGTGAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTWGPRP*GPVKAG
Trigger: TCCTGCCTTCACAGGCCCTCAGGGTCTGGGACCCCA...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACACCGAGCTGCAGGAGGTaGACGAGGGTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTPSCRR*TRVCSS
Trigger: GCTGCTGCAGACCCTCGTCCACCTCCTGCAGCTCGG...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAAAAATTCCATTCACGCTaGGCTCTAGAACCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DSPGPGSGEFREWATRLKKFHSR*ALEPLL
Trigger: GAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTT...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGACTCCAGGATCAGGTTaGCATCTGTCCTTAACATCC +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQTPGSG*HLSLTS
Trigger: GGATGTTAAGGACAGATGCCAACCTGATCCTGGAGT...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACGTCTGTTTCTGGGTCTaGGTCCGCATCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDVCFWV*VRIFRA
Trigger: AGCTCTGAAGATGCGGACCCAGACCCAGAAACAGAC...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTCCAGATGGGCCATTCTaGGATACTGGGGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPPDGPF*DTGEEN
Trigger: ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGG...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCACAGCTCCAAGGGGATaGACCCCTCCCTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISTAPRG*TPPSSD
Trigger: GTCAGATGAGGGAGGGGTCCATCCCCTTGGAGCTGT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAGGGCTGCAAGGACCCTaGCAGGGTGGGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTGLQGP*QGGKDR
Trigger: CCTGTCCTTCCCACCCTGCCAGGGTCCTTGCAGCCC...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTAAGCGAGACCTTCCCTaGATATTCCCAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPKRDLP*IFPAPS
Trigger: TGAGGGAGCTGGGAATATCCAGGGAAGGTCTCGCTT...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGAGTCCTTTAAGGGCTaGGACTCTTCTGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIESFKG*DSSEGE
Trigger: CTCACCCTCAGAAGAGTCTCAGCCCTTAAAGGACTC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACTCTATCCCAGTGAAATaGAGGGACAAGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDSIPVK*RDKPVE
Trigger: CTCCACTGGCTTGTCCCTTCATTTCACTGGGATAGA...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACGTAGCCCTTATCAGATaGTTCCCAAACCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHVALIR*FPNQGP
Trigger: GGGTCCCTGGTTTGGGAATCATCTGATAAGGGCTAC...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCTCTCCAGCAGGACGATaGAGTGGTAGAGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISSPAGR*SGRGSC
Trigger: GCATGACCCTCTACCACTGCATCGTCCTGCTGGAGA...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAAGCCTGTCCCTTTTGTaGTGGGACACTGTAGCCTAC +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFISLSLL*WDTVAY
Trigger: GTAGGCTACAGTGTCCCAGCACAAAAGGGACAGGCT...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACCCTTTGGTGAGTCCTTaGTCCTCTCTGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHPLVSP*SSLGLT
Trigger: AGTGAGACCCAGAGAGGACCAAGGACTCACCAAAGG...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACAGTTACAAGGCACATaGCACATCAGTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQQLQGT*HISARR
Trigger: CCTCCTGGCACTGATGTGCCATGTGCCTTGTAACTG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAGCAAGGCTCCCTCATTaGGGAGCCCTGTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTARLPH*GALCGG
Trigger: TCCCCCACACAGGGCTCCCCAATGAGGGAGCCTTGC...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp CCAACCCTACTACTGCCCATGCGGCTTGACACCCACTaGTTCCCTTCCATTGAGACACTGCAAAGCACTTTA +
Preference number: 4 (lower is better)
Translates to: PTLLLPMRLDTH*FPSIETLQSTL
Trigger: TAAAGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTAGTAGGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCAACCTCACCTGCACTTaGGCCCAGAGATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISNLTCT*AQRSFQ
Trigger: CTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATATGTCTCAGGGGTTCTaGGGACAATTTCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENMSQGF*GQFPFR
Trigger: TCTAAAAGGAAATTGTCCTCAGAACCCCTGAGACAT...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACATGCTGGTGGGGAGGGTaGCCCGTATCATGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTCWWGG*PVSWLC
Trigger: GCACAACCATGATACGGGTCACCCTCCCCACCAGCA...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACATCTCCCTGGGCCCTTTaGCTGTGGCCATTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTSPWAL*LWPFLC
Trigger: GCACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGA...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACTCCCATCTCTGGGCTTaGCCCTTCAGTAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDSHLWA*PFSKIG
Trigger: TCCTATTTTACTGAAGGGGCAAGCCCAGAGATGGGA...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACATACTCCAGCAGCTCCTaGGAAGTCCCCACACTCCGG +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTYSSSS*EVPTLR
Trigger: CCGGAGTGTGGGGACTTCCCAGGAGCTGCTGGAGTA...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTCTGTCCCTTTTGTGCTaGGACACTGTAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSLSLLC*DTVAYT
Trigger: AGTGTAGGCTACAGTGTCCCAGCACAAAAGGGACAG...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCCAGCTGGGAACCAGTTaGCAGCTGAAATGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISQLGTS*QLKCLR
Trigger: CCTGAGACATTTCAGCTGCCAACTGGTTCCCAGCTG...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTTTCAGCCTCCAAAGATaGATTTGGAGGATGGATGAA +
Preference number: 4 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASFSLQR*IWRMDE
Trigger: TTCATCCATCCTCCAAATCCATCTTTGGAGGCTGAA...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTAAGGCAGCAGCCAGATaGGCCATTCTGGGATACTGG +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSKAAAR*AILGYW
Trigger: CCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTT...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATCTCCTCCAAGTTCGGTaGTTTAGCACAATGGAGACC +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNLLQVR*FSTMET
Trigger: GGTCTCCATTGTGCTAAACCACCGAACTTGGAGGAG...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATAGAAAGCCAGTGGGGCTaGGGGCTATGTTTATATGAG +
Preference number: 4 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIESQWG*GLCLYE
Trigger: CTCATATAAACATAGCCCCCAGCCCCACTGGCTTTC...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp CAACACAACAAGAGACGTCTCCTAAGGAGTTCATTCTaGTTCGCTATGCTCTGGATTGCAGGTTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QHNKRRLLRSSF*FAMLWIAGSPP
Trigger: GGGAGGGGAACCTGCAATCCAGAGCATAGCGAACAAGAATGAACTCCTTAGGAGACGTCTCTTGTTGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp GGTCCGCATCTTCAGAGCTCCCATCTCACAACGGCTTaGTGTGTGAATTCAGCCTCCAAAGATGGATTTGGA +
Preference number: 4 (lower is better)
Translates to: GPHLQSSHLTTA*CVNSASKDGFG
Trigger: TCCAAATCCATCTTTGGAGGCTGAATTCACACACAAAGCCGTTGTGAGATGGGAGCTCTGAAGATGCGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCACCAGTGGGCCACGATaGAGATGCCAAAATAGAGCT +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEITSGPR*RCQNRA
Trigger: AGCTCTATTTTGGCATCTTCATCGTGGCCCACTGGT...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCGGATACCCTCCATTCTaGGATTATTGCAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISGYPPF*DYCRCP
Trigger: AGGGCACCTGCAATAATCTCAGAATGGAGGGTATCC...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTCATGGTTGTGCTTGTaGTTGTGTGTATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHSWLCL*LCVCGQ
Trigger: CTGCCCACATACACACAAGCACAAGCACAACCATGA...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTAAGGAAAAGCACTCTTaGTGTGTTGGCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSKEKHS*CVGRRD
Trigger: ATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTT...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTATACACAGATCAGAGTaGCTCCCTGGGACATTTTAT +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTIHRSE*LPGTFY
Trigger: ATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTAT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGTCCTCGTCTGTAAGATaGGTTGATAATACCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQSSSVR*VDNTSL
Trigger: AAGAGAGGTATTATCAACCCATCTTACAGACGAGGA...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTCATTTGCAGAGTGGCTaGGAGCCAGGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSHLQSG*EPGFMS
Trigger: TGACATGAATCCTGGCTCTCAGCCACTCTGCAAATG...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACAAGTTTCCCAAACATTTaGATTTTAGTACCTACAGGC +
Preference number: 4 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTSFPNI*ILVPTG
Trigger: GCCTGTAGGTACTAAAATTCAAATGTTTGGGAAACT...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTCAAGCCCTAGAAGTTaGCTTGAGGCCTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNSSPRS*LEALET
Trigger: TGTTTCTAAGGCCTCAAGTCAACTTCTAGGGCTTGA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACGCCCACAAGTGCTTTTaGGAATTTTGTATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYAHKCF*EFCIKQ
Trigger: TTGCTTAATACAAAATTCTCAAAAGCACTTGTGGGC...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTCCTTTGGGGTTACCCTaGATCCCCAGCAATTCATCA +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSPLGLP*IPSNSS
Trigger: TGATGAATTGCTGGGGATGCAGGGTAACCCCAAAGG...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp ATTCCTAGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACACACAGTCAACAGCGTaGGGGTCAGTTCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: IPRKFHSRWALEPLLPHHTQSTA*GSVLRK
Trigger: TTTTCTTAGAACTGACCCCCACGCTGTTGACTGTGT...GTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTGAAATGAGGCTGGTTTaGGAGAAAAATCTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTEMRLV*EKNLLN
Trigger: GTTTAGGAGATTTTTCTCCCAAACCAGCCTCATTTC...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCAGTAGTAGACACACATaGAGAATATGCCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISSSRHT*RICPAQ
Trigger: TTGCGCTGGGCATATTCTTCATGTGTGTCTACTACT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTTTCAAACATTTCACCTaGGGTGTGTGGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSFKHFT*GVWNFI
Trigger: GATGAAGTTCCACACACCTCAGGTGAAATGTTTGAA...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTCTTATCTGCTGTGTTaGAGACCTGTATCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNSYLLC*RPVSRS
Trigger: GCTTCTAGATACAGGTCTTCAACACAGCAGATAAGA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTTTCAGTAAAATAGGATaGTGGATGTCTAAACCATTG +
Preference number: 4 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASFSKIG*WMSKPL
Trigger: CAATGGTTTAGACATCCAGCATCCTATTTTACTGAA...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATACCTTCTCAACATTTTaGACCGTAAGTCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNTFSTF*TVSLKL
Trigger: CAGTTTGAGACTTACGGTTCAAAATGTTGAGAAGGT...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAAGTCTAGGATTCTCATaGCCCACCTCACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTSLGFS*PTSLQD
Trigger: ATCCTGGAGTGAGGTGGGCCATGAGAATCCTAGACT...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp GTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTaGAGCCCAGAGATCTTTCCAGACATCTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: VPLITVLKPHLH*SPEIFPDILSA
Trigger: AGCAGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACACTTCCAGCTATTTCATaGTGGGTTCGGAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTLPAIS*WVRKAS
Trigger: ACTGGCTTTCCGAACCCATCATGAAATAGCTGGAAG...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR TCA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTCTTCTTCAAGAAATaGGGCTGGTTTGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SVPLITVLKPHLHLSPEIFFFKK*GWFGRK
Trigger: TTTTCTCCCAAACCAGCCTCATTTCTTGAAGAAGAA...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATTTCCTTTTAGAAAGATaGCTATGGACCAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNFLLER*LWTKVT
Trigger: TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAA...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAATAGACCACAGGTCCTaGGGAGTCATCAGATCTAAG +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTIDHRS*GVIRSK
Trigger: CTTAGATCTGATGACTCCCCAGGACCTGTGGTCTAT...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CCA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAAGGGCCTGCCATATTTaGTACCCAAAGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTRACHI*YPKHPV
Trigger: AACAGGATGCTTTGGGTACCAAATATGGCAGGCCCT...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp GTCTCCATTACTCTTAGTTTCATTATCTCGAGGCATTaGAGTTTGCATCCCATGCAGCCTTCGTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSITLSFIISRH*SLHPMQPSSQK
Trigger: TTTCTGGGACGAAGGCTGCATGGGATGCAAACTCAAATGCCTCGAGATAATGAAACTAAGAGTAATGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR GCA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTTCCAGACATCTTATCTaGTGTGTTGAAGACCTGTAT +
Preference number: 4 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSSRHLI*CVEDLY
Trigger: ATACAGGTCTTCAACACAGCAGATAAGATGTCTGGA...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
3UTR CAA 72 bp ATTACTCTTAGTTTCATTATCTCGAGGCATTTGAGTTaGCATCCCATGCAGCCTTCGTCCCAGAAAACCTTC +
Preference number: 4 (lower is better)
Translates to: ITLSFIISRHLS*HPMQPSSQKTF
Trigger: GAAGGTTTTCTGGGACGAAGGCTGCATGGGATGCAAACTCAAATGCCTCGAGATAATGAAACTAAGAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 90 bp GCGGAGGTGGAGAGGGCCGGCAGCAGGTCGGGCGCGCCACCGCGGTaGACCAGCAGGCTGAGCTGCAGCACTAGCTGCGGCGCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: AEVERAGSRSGAPPR*TSRLSCSTSCGALR
Trigger: GCGCAGCGCGCCGCAGCTAGTGCTGCAGCTCAGCCTGCTGGTGCACCGCGGTGGCGCGCCCGACCTGCTGCCGGCCCTCTCCACCTCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 90 bp GGCCAGGCCGCGGGCGGCAATGCTGAACAGGTGCCACAGCACCTGTaGCACGGCGCCCTTGTAGGACAGCGGCCGCTTGTCGTCCCGCGA +
Preference number: 5 (lower is better)
Translates to: GQAAGGNAEQVPQHL*HGALVGQRPLVVPR
Trigger: TCGCGGGACGACAAGCGGCCGCTGTCCTACAAGGGCGCCGTGGCACAGGTGCTGTGGCACCTGTTCAGCATTGCCGCCCGCGGCCTGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp AGACGCTGGCGAAGAGCGCGAAGGCCAGGCCGCGGGCGGCAATGCTaGACAGGTGCCACAGCACCTGTGCCACGGCGCCCTTGTAGGACA +
Preference number: 5 (lower is better)
Translates to: RRWRRARRPGRGRQC*TGATAPVPRRPCRT
Trigger: TGTCCTACAAGGGCGCCGTGGCACAGGTGCTGTGGCACCTGTTCAGCATTGCCGCCCGCGGCCTGGCCTTCGCGCTCTTCGCCAGCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp CTGGGAAGTCCCCACACTCCGGTACTGCAACCGGGGCGTGGCAGGTaGGGAGTACTCCAGTGCCAGGATGGTCTTCCGGAGCCGGCGGTC +
Preference number: 5 (lower is better)
Translates to: LGSPHTPVLQPGRGR*GVLQCQDGLPEPAV
Trigger: GACCGCCGGCTCCGGAAGACCATCCTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 90 bp TGGCGTCAGCGGGTGGGCCACAGGGCTCTGAGGCCTTACGGAAGATaGAACCAGGTGCCTGGGGACCCAGCATGGGCCCATTGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: WRQRVGHRALRPYGR*NQVPGDPAWAHWGA
Trigger: TGCACCCCAATGGGCCCATGCTGGGTCCCCAGGCACCTGGTTGCATCTTCCGTAAGGCCTCAGAGCCCTGTGGCCCACCCGCTGACGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 90 bp GCAGCTCCTGGGAAGTCCCCACACTCCGGTACTGCAACCGGGGCGTaGCAGGTGAGGAGTACTCCAGTGCCAGGATGGTCTTCCGGAGCC +
Preference number: 5 (lower is better)
Translates to: AAPGKSPHSGTATGA*QVRSTPVPGWSSGA
Trigger: GGCTCCGGAAGACCATCCTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCCAGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp GAGCATCCCAGGCCGGGTACTTCTTGCGAGGCAAGTCAATCCGGATaGCAGGCCCCTCTGTCCGCAAGGTGCGGGCCACTGGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: EHPRPGTSCEASQSG*QAPLSARCGPLVWE
Trigger: CTCCCACACCAGTGGCCCGCACCTTGCGGACAGAGGGGCCTGTCATCCGGATTGACTTGCCTCGCAAGAAGTACCCGGCCTGGGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 90 bp GTCTCATACTCCAGCAGCTCCTGGGAAGTCCCCACACTCCGGTACTaGAACCGGGGCGTGGCAGGTGAGGAGTACTCCAGTGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: VSYSSSSWEVPTLRY*NRGVAGEEYSSARM
Trigger: CATCCTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCCAGGAGCTGCTGGAGTATGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTCAGAAGCCTCTATGGTaGGGAAGGGGGCTCAAACCC +
Preference number: 5 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCQKPLW*GRGLKP
Trigger: GGGTTTGAGCCCCCTTCCCAACCATAGAGGCTTCTG...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 90 bp TGGGACACTGTAGCCTACACTGTGGTCTCATACTCCAGCAGCTCCTaGGAAGTCCCCACACTCCGGTACTGCAACCGGGGCGTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WDTVAYTVVSYSSSS*EVPTLRYCNRGVAG
Trigger: ACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCCAGGAGCTGCTGGAGTATGAGACCACAGTGTAGGCTACAGTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp GCTGGAGGCCACTACGCAGACCATGATGAGCGAGTAGAAGTCGGTTaGGAAGTTGCGGCTGGAGTACCAGAAGCCGGTGAGCGCGGCGTT +
Preference number: 5 (lower is better)
Translates to: AGGHYADHDERVEVG*EVAAGVPEAGERGV
Trigger: AACGCCGCGCTCACCGGCTTCTGGTACTCCAGCCGCAACTTCTCAACCGACTTCTACTCGCTCATCATGGTCTGCGTAGTGGCCTCCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACTGGCCCTCCCTGCCTTaGGGGTTACCCTGCATCCCC +
Preference number: 5 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYWPSLP*GLPCIP
Trigger: GGGGATGCAGGGTAACCCCAAAGGCAGGGAGGGCCA...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCACTCTCCCTGGGCCCTTaGACTGTGGCCATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPLSLGP*TVAIPV
Trigger: CACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAG...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp AGTAGAAGTCGGTTGAGAAGTTGCGGCTGGAGTACCAGAAGCCGGTaGGCGCGGCGTTCTCCAGCAGGACGATGCAGTGGTAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SRSRLRSCGWSTRSR*ARRSPAGRCSGRGS
Trigger: TGACCCTCTACCACTGCATCGTCCTGCTGGAGAACGCCGCGCTCACCGGCTTCTGGTACTCCAGCCGCAACTTCTCAACCGACTTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAATCGCTATGCTCTGGATaGCAGGTTCCCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQSLCSG*QVPLPQ
Trigger: TTGGGGGAGGGGAACCTGCAATCCAGAGCATAGCGA...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGGGTGCCTGCAGAGGTTaGGGGAACACAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGGACRG*GNTVNS
Trigger: GCTGTTGACTGTGTTCCCCAAACCTCTGCAGGCACC...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp TACTCCAGTGCCAGGATGGTCTTCCGGAGCCGGCGGTCAATAAAATaGGCATCCCAGGCCGGGTACTTCTTGCGAGGCAAGTCAATCCGG +
Preference number: 5 (lower is better)
Translates to: YSSARMVFRSRRSIK*ASQAGYFLRGKSIR
Trigger: CCGGATTGACTTGCCTCGCAAGAAGTACCCGGCCTGGGATGCTCATTTTATTGACCGCCGGCTCCGGAAGACCATCCTGGCACTGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 90 bp ACACTGCGGCGGATGTGGGATCAGCCAAGCCTGTCCCTTTTGTGCTaGGACACTGTAGCCTACACTGTGGTCTCATACTCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TLRRMWDQPSLSLLC*DTVAYTVVSYSSSS
Trigger: GGAGCTGCTGGAGTATGAGACCACAGTGTAGGCTACAGTGTCCCAGCACAAAAGGGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCTCGGGGCTGCCTTCTTaGGTCCGGAAGGCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISSGLPS*VRKAPA
Trigger: CGCCGGCGCCTTCCGGACCAAAGAAGGCAGCCCCGA...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCGAAGTCCGTCTCCCCTaGGATGACCCAGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPEVRLP*DDPEGH
Trigger: ATGACCTTCTGGGTCATCCAAGGGGAGACGGACTTC...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAACCAAGCCTGTCCCTTTaGTGCTGGGACACTGTAGCC +
Preference number: 5 (lower is better)
Translates to: DSPGPGSGEFREWATRLKPSLSL*CWDTVA
Trigger: GGCTACAGTGTCCCAGCACAAAAGGGACAGGCTTGG...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACATTCTTCAGCTCCCTCTaGCCCTGGCTCCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTFFSSL*PWLQAS
Trigger: TGAGGCCTGGAGCCAGGGCAAGAGGGAGCTGAAGAA...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGCCAGAGTCTGGGACCTaGAGAGAGTGGCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVPESGT*REWLPL
Trigger: GAGTGGCAGCCACTCTCTCAAGGTCCCAGACTCTGG...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCCCAGATGTCCCTGCAGGCAGAAGCCCTGAGGGAAGGGTGTGTGGGGTTGAGAATTACCCATCACCTTTaGATGGGCAGCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: AQMSLQAEALREGCVGLRITHHL*MGSPES
Trigger: AGACTCTGGGCTGCCCATCAAAAGGTGATGGGTAAT...TCTCAACCCCACACACCCTTCCCTCAGGGCTTCTGCCTGCAGGGACATCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CCCAGGATACCCTCCATTCTGAGATTATTGCAGGTGCCCTGGGACCCCCACCCAAGCACTCTTGCTGTGTaGGCAGGAGGGATGATGCGT +
Preference number: 5 (lower is better)
Translates to: PRIPSILRLLQVPWDPHPSTLAV*AGGMMR
Trigger: ACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCT...TGGGTGGGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGAGGGTATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ACCCTTGGACCAACAGATCCACTCCCCCTTAGCCTGGTGGCCCTGAAATTCGGGTGGCCAGGGGTGCCCTaGCAGTGGTTATGCATAGAA +
Preference number: 5 (lower is better)
Translates to: TLGPTDPLPLSLVALKFGWPGVP*QWLCIE
Trigger: TTCTATGCATAACCACTGCAAGGGCACCCCTGGCCA...CCCGAATTTCAGGGCCACCAGGCTAAGGGGGAGTGGATCTGTTGGTCCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 90 bp CCAGCATGGGCCCATTGGGGTGCAGGAGACAGTAGTAGACACACATaGAGAATATGCCCAGCGCAAAGCTGGAGGCCACTACGCAGACCA +
Preference number: 5 (lower is better)
Translates to: PAWAHWGAGDSSRHT*RICPAQSWRPLRRP
Trigger: TGGTCTGCGTAGTGGCCTCCAGCTTTGCGCTGGGCATATTCTTCATGTGTGTCTACTACTGTCTCCTGCACCCCAATGGGCCCATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 90 bp ACAACACTGCGGCGGATGTGGGATCAGCCAAGCCTGTCCCTTTTGTaGTGGGACACTGTAGCCTACACTGTGGTCTCATACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TTLRRMWDQPSLSLL*WDTVAYTVVSYSSS
Trigger: GCTGCTGGAGTATGAGACCACAGTGTAGGCTACAGTGTCCCAGCACAAAAGGGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CTGTGCTGTTCAGCTGGGGTGACAGTTACAAGGCACATGGCACATCAGTGCCAGCTGAGGGGTTTCCACTaGGCAGGACACTCCAGAACC +
Preference number: 5 (lower is better)
Translates to: LCCSAGVTVTRHMAHQCQLRGFH*AGHSRT
Trigger: GGTTCTGGAGTGTCCTGCCAAGTGGAAACCCCTCAG...CTGGCACTGATGTGCCATGTGCCTTGTAACTGTCACCCCAGCTGAACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATGCGAGTAGAAGTCGGTaGAGAAGTTGCGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENASRSR*RSCGWS
Trigger: ACTCCAGCCGCAACTTCTCAACCGACTTCTACTCGC...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACGGGGCCACTCTACCCTaGGACCAACAGATCCACTCC +
Preference number: 5 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDGATLP*DQQIHS
Trigger: GGAGTGGATCTGTTGGTCCAAGGGTAGAGTGGCCCC...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GGAGGAGGTGCCTGCAGCCCTCTCCCTGGGCCCTTTGACTGTGGCCATTCCTGTCTAAGGAGTTCATTCTaGTTCGCTATGCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: GGGACSPLPGPFDCGHSCLRSSF*FAMLWI
Trigger: AATCCAGAGCATAGCGAACAAGAATGAACTCCTTAG...ACAGGAATGGCCACAGTCAAAGGGCCCAGGGAGAGGGCTGCAGGCACCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCTCACCCAAACCTCACCTGCACTaGAGCCCAGAGATCTTTCCA +
Preference number: 5 (lower is better)
Translates to: QMLQEPRHPCPHNAPTSPKPHLH*SPEIFP
Trigger: TGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTT...GGGTGAGGTTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CCAGGCCTCAGATGCTACAGGAGCCACGCCATCCCTGTCCACACAATGCTCCAACCAATCACACCTAAGTaGCTGTGGGAGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PGLRCYRSHAIPVHTMLQPITPK*LWECVC
Trigger: ACACACACACTCCCACAGCAACTTAGGTGTGATTGG...TTGGAGCATTGTGTGGACAGGGATGGCGTGGCTCCTGTAGCATCTGAGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAAGAAGGAAAAGCACTCTaGCTGTGTTGGCAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: DSPGPGSGEFREWATRLKEGKAL*LCWQEG
Trigger: TCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTC...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGATCTTTTCCCACCATAGAGGCAGCCCACTCTCCACAACCCCTGAGGAGCACATACTGCCCATGCGGCTaGACACCCACTTGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSFPTIEAAHSPQPLRSTYCPCG*TPTCSL
Trigger: AAGGGAACAAGTGGGTGTCAAGCCGCATGGGCAGTA...TGTGCTCCTCAGGGGTTGTGGAGAGTGGGCTGCCTCTATGGTGGGAAAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ACTGGTCTCCTGGGGTTAGAGGTAACTGAGGGCAGGGCCTGCCATATTTGGTACTCCATTCTGAGATTATaGCAGGTGCCCTGGGACCCC +
Preference number: 5 (lower is better)
Translates to: TGLLGLEVTEGRACHIWYSILRL*QVPWDP
Trigger: GGGGTCCCAGGGCACCTGCAATAATCTCAGAATGGA...GTACCAAATATGGCAGGCCCTGCCCTCAGTTACCTCTAACCCCAGGAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAATTCTGTACCCCCTCTTaGTCCCAGGATACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: DSPGPGSGEFREWATRLKFCTPS*SQDTLH
Trigger: ATGGAGGGTATCCTGGGACAAAGAGGGGGTACAGAA...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTAAGTCGGTTGAGAAGTaGCGGCTGGAGTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASKSVEK*RLEYQK
Trigger: CTTCTGGTACTCCAGCCGCAACTTCTCAACCGACTT...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGAAGGAAAAGCACTCTTGCTGTGTTGGCAGGAGGGATGATGCGTACACCATCTCAGGCCGGGTACTTCTaGCGAGGCAAGTCAATCCGG +
Preference number: 5 (lower is better)
Translates to: RRKSTLAVLAGGMMRTPSQAGYF*RGKSIR
Trigger: CCGGATTGACTTGCCTCGCAAGAAGTACCCGGCCTG...AGATGGTGTACGCATCATCCCTCCTGCCAACACAGCAAGAGTGCTTTTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CTGGTGGCACGTGGGCCAAATATGAGTGGCCAGCAGTTTCCCAAACATTTGAATGCACATCCCTGCCCCTaGGGAGTCTCCTGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: LVARGPNMSGQQFPKHLNAHPCP*GVSWSV
Trigger: TACACTCCAGGAGACTCCCAAGGGGCAGGGATGTGC...ATTCAAATGTTTGGGAAACTGCTGGCCACTCATATTTGGCCCACGTGCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp TCCTCTAGAAGGCAGCAGCCAGATGGGCCATTCTGGGATACTGGGGAGGAGAATGTACTTAGGAGGGTGTaGACTGCAAGCGAGACCTTC +
Preference number: 5 (lower is better)
Translates to: SSRRQQPDGPFWDTGEENVLRRV*TASETF
Trigger: GAAGGTCTCGCTTGCAGTCAACACCCTCCTAAGTAC...ATTCTCCTCCCCAGTATCCCAGAATGGCCCATCTGGCTGCTGCCTTCTAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGTCGAGGCATTTGAGTTaGCATCCCATGCAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVSRHLS*HPMQPS
Trigger: CGAAGGCTGCATGGGATGCAAACTCAAATGCCTCGA...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTTGGTTGTGCTTGTGCTaGTGTGTATGTGGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASWLCLC*CVCGQS
Trigger: AGACTGCCCACATACACACAAGCACAAGCACAACCA...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GATTCCCCAGGCCCTGGGTCAGGGGAATTTAGGGAATGGGCCACAAGGCTGAAAGTATCATGGTTGTGCTaGTGCTTGTGTGTATGTGGG +
Preference number: 5 (lower is better)
Translates to: DSPGPGSGEFREWATRLKVSWLC*CLCVCG
Trigger: CCCACATACACACAAGCACAAGCACAACCATGATAC...TTTCAGCCTTGTGGCCCATTCCCTAAATTCCCCTGACCCAGGGCCTGGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCTGCTGTCCTCTCCCACCAATCACACCTAAGTTGCTGTGGGAGTGTGTGTGTGATTCCTGGCACAAAGTaGGCCCTGGAGAAACAGTCT +
Preference number: 5 (lower is better)
Translates to: AAVLSHQSHLSCCGSVCVIPGTK*ALEKQS
Trigger: AGACTGTTTCTCCAGGGCCAACTTTGTGCCAGGAAT...CACACACACACTCCCACAGCAACTTAGGTGTGATTGGTGGGAGAGGACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GGACCCAGAAATGTCCTATCCTCTCCCCAACCAGAATGGCACATTGAAGCTCCTCTTCCTGTGTGGCCTTaGGTGAGTCCTTGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GPRNVLSSPQPEWHIEAPLPVWP*VSPWSS
Trigger: AGAGGACCAAGGACTCACCAAAGGCCACACAGGAAG...AGGAGCTTCAATGTGCCATTCTGGTTGGGGAGAGGATAGGACATTTCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp TTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCAAAACCTTCTCCCTATaGTCTGAGGCTTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: FGGWMNPTEWAWVSLGLLKTFSL*SEASVD
Trigger: GTCCACAGAAGCCTCAGACAATAGGGAGAAGGTTTT...GAGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACCAGCTGGGAACCAGTaGGCAGCTGAAATGTCTCAG +
Preference number: 5 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQPAGNQ*AAEMSQ
Trigger: CTGAGACATTTCAGCTGCCAACTGGTTCCCAGCTGG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGAAAATTCCATTCACGCTGGGCTCTAGAACCTCTTCTCCCCCACCACTGTGACCAGGGCCTGCCATATTaGGTACCCAAAGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: RKFHSRWALEPLLPHHCDQGLPY*VPKASC
Trigger: ACAGGATGCTTTGGGTACCAAATATGGCAGGCCCTG...GTCACAGTGGTGGGGGAGAAGAGGTTCTAGAGCCCAGCGTGAATGGAATTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGCCTGGTGGCCCTGAAATTCGGGGCACAACACTGCGGCGGATGTGGGATCAGCAACCTTCTCAACATTTaGAACCGTAAGTCTCAAACT +
Preference number: 5 (lower is better)
Translates to: SLVALKFGAQHCGGCGISNLLNI*NRKSQT
Trigger: AGTTTGAGACTTACGGTTCAAAATGTTGAGAAGGTT...GCTGATCCCACATCCGCCGCAGTGTTGTGCCCCGAATTTCAGGGCCACCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp ATTTGGAGGATGGATGAACCCAACAGAGTGGGCCTGGGTCAGCCTTGGGCTTCTCCCCAACACTCCCTATaGTCTCCATTACTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: IWRMDEPNRVGLGQPWASPQHSL*SPLLLV
Trigger: AACTAAGAGTAATGGAGACAATAGGGAGTGTTGGGG...AGAAGCCCAAGGCTGACCCAGGCCCACTCTGTTGGGTTCATCCATCCTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp TCAGTTCCTCTGATAACTGTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCCACAGAATGGGACTCTaGGGTCCTGGCTTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: SVPLITVLKPHLHLSPEIHRMGL*GPGFQS
Trigger: GGACTGAAAGCCAGGACCCAAGAGTCCCATTCTGTG...GATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GCCATGGGAATAGACCACAGGTCCTGGGGAGTCATCAGATCTAAGGCAAAACAACGGCTTGACACCCACTaGTTCCCTTCCATTGAGACA +
Preference number: 5 (lower is better)
Translates to: AMGIDHRSWGVIRSKAKQRLDTH*FPSIET
Trigger: TGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCG...TTGTTTTGCCTTAGATCTGATGACTCCCCAGGACCTGTGGTCTATTCCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTACTTGCTGTGTGACCTaGGGCTGGCCATCTCCCATC +
Preference number: 5 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSTCCVT*GWPSPI
Trigger: GATGGGAGATGGCCAGCCCAAGGTCACACAGCAAGT...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CAGCTATTTCATGATGGGTTCGGAAAGCCAGTGGGGCTGGGGGCTATGTTTATACACTCCAGGATCAGGTaGGCATCTGTCCTTAACATC +
Preference number: 5 (lower is better)
Translates to: QLFHDGFGKPVGLGAMFIHSRIR*ASVLNI
Trigger: GATGTTAAGGACAGATGCCAACCTGATCCTGGAGTG...TATAAACATAGCCCCCAGCCCCACTGGCTTTCCGAACCCATCATGAAATAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CCCATGCGGCTTGACACCCACTTGTTCCCTTCCATTGAGACACTGCAAAGCACTACTTGTTCCCTTCCATaGAGACACTGCAAAGCACTT +
Preference number: 5 (lower is better)
Translates to: PMRLDTHLFPSIETLQSTTCSLP*RHCKAL
Trigger: AAGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGT...AGTGCTTTGCAGTGTCTCAATGGAAGGGAACAAGTGGGTGTCAAGCCGCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp GTGCTAAAACCTCACCTGCACTTGAGCCCAGAGATCTTTCCAGACATCTTATCTCATCTCACAACGGCTTaGTGTGTGAATTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VLKPHLHLSPEIFPDILSHLTTA*CVNSAS
Trigger: GGAGGCTGAATTCACACACAAAGCCGTTGTGAGATG...AGATAAGATGTCTGGAAAGATCTCTGGGCTCAAGTGCAGGTGAGGTTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp AGGGGTTCTGAGGACAATTTCCTTTTAGAAAGATGGCTATGGACCAAGGTAACAGGGGAGGAGAATAACTaGCCAAGGGTGACCCTCATG +
Preference number: 5 (lower is better)
Translates to: RGSEDNFLLERWLWTKVTGEENN*PRVTLM
Trigger: CATGAGGGTCACCCTTGGCAAGTTATTCTCCTCCCC...TGTTACCTTGGTCCATAGCCATCTTTCTAAAAGGAAATTGTCCTCAGAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS-3UTR CAA 90 bp CTCCTCACAACAGAATACACAGATCAGAGTGGCTCCCTGGGACATTTTATCAGCAGAAATGAGGCTGGTTaGGGAGAAAAATCTCCTAAA +
Preference number: 5 (lower is better)
Translates to: LLTTEYTDQSGSLGHFISRNEAG*GEKSPK
Trigger: TTTAGGAGATTTTTCTCCCAAACCAGCCTCATTTCT...GCTGATAAAATGTCCCAGGGAGCCACTCTGATCTGTGTATTCTGTTGTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp GCAGGTCGGGCGCGCCACCGCGGTGCACCAGCAGGCTaGGCTGCAGCACTAGCTGCGGCGCGCTGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: AGRARHRGAPAG*AAALAAARCAG
Trigger: TCCTGCGCAGCGCGCCGCAGCTAGTGCTGCAGCTCAGCCTGCTGGTGCACCGCGGTGGCGCGCCCGACCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 72 bp AAGTGGCGCCGCAGCCGCTCCCCGCGCCAGCGGCTCTaGAGCCCCAGGTACAGGGCGCGCAGGTACCTCCAG +
Preference number: 6 (lower is better)
Translates to: KWRRSRSPRQRL*SPRYRARRYLQ
Trigger: CTGGAGGTACCTGCGCGCCCTGTACCTGGGGCTGCAGAGCCGCTGGCGCGGGGAGCGGCTGCGGCGCCACTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp CGAAGAGCGCGAAGGCCAGGCCGCGGGCGGCAATGCTaGACAGGTGCCACAGCACCTGTGCCACGGCGCCCT +
Preference number: 6 (lower is better)
Translates to: RRARRPGRGRQC*TGATAPVPRRP
Trigger: AGGGCGCCGTGGCACAGGTGCTGTGGCACCTGTTCAGCATTGCCGCCCGCGGCCTGGCCTTCGCGCTCTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 72 bp CAGGCCCCTCTGTCCGCAAGGTGCGGGCCACTGGTGTaGGAGGCAAGCCAGGCCGCACCTGGAAGACAGGTG +
Preference number: 6 (lower is better)
Translates to: QAPLSARCGPLV*EASQAAPGRQV
Trigger: CACCTGTCTTCCAGGTGCGGCCTGGCTTGCCTCCCACACCAGTGGCCCGCACCTTGCGGACAGAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 72 bp GCGGGCGGCAATGCTGAACAGGTGCCACAGCACCTGTaGCACGGCGCCCTTGTAGGACAGCGGCCGCTTGTC +
Preference number: 6 (lower is better)
Translates to: AGGNAEQVPQHL*HGALVGQRPLV
Trigger: GACAAGCGGCCGCTGTCCTACAAGGGCGCCGTGGCACAGGTGCTGTGGCACCTGTTCAGCATTGCCGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp CCCCACACTCCGGTACTGCAACCGGGGCGTGGCAGGTaGGGAGTACTCCAGTGCCAGGATGGTCTTCCGGAG +
Preference number: 6 (lower is better)
Translates to: PHTPVLQPGRGR*GVLQCQDGLPE
Trigger: CTCCGGAAGACCATCCTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp AGGCCGGGTACTTCTTGCGAGGCAAGTCAATCCGGATaGCAGGCCCCTCTGTCCGCAAGGTGCGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RPGTSCEASQSG*QAPLSARCGPL
Trigger: CAGTGGCCCGCACCTTGCGGACAGAGGGGCCTGTCATCCGGATTGACTTGCCTCGCAAGAAGTACCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS GCA 72 bp TCCAGCAGCTCCTGGGAAGTCCCCACACTCCGGTACTaGAACCGGGGCGTGGCAGGTGAGGAGTACTCCAGT +
Preference number: 6 (lower is better)
Translates to: SSSSWEVPTLRY*NRGVAGEEYSS
Trigger: ACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCCAGGAGCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 72 bp GGGAAGTCCCCACACTCCGGTACTGCAACCGGGGCGTaGCAGGTGAGGAGTACTCCAGTGCCAGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: GKSPHSGTATGA*QVRSTPVPGWS
Trigger: AGACCATCCTGGCACTGGAGTACTCCTCACCTGCCACGCCCCGGTTGCAGTACCGGAGTGTGGGGACTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp CGGTTGAGAAGTTGCGGCTGGAGTACCAGAAGCCGGTaGGCGCGGCGTTCTCCAGCAGGACGATGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: RLRSCGWSTRSR*ARRSPAGRCSG
Trigger: ACCACTGCATCGTCCTGCTGGAGAACGCCGCGCTCACCGGCTTCTGGTACTCCAGCCGCAACTTCTCAACCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp GCCAGGATGGTCTTCCGGAGCCGGCGGTCAATAAAATaGGCATCCCAGGCCGGGTACTTCTTGCGAGGCAAG +
Preference number: 6 (lower is better)
Translates to: ARMVFRSRRSIK*ASQAGYFLRGK
Trigger: CTTGCCTCGCAAGAAGTACCCGGCCTGGGATGCTCATTTTATTGACCGCCGGCTCCGGAAGACCATCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CAA 90 bp GGCACAACACTGCGGCGGATGTGGGATCAGCCAAGCCTGTCCCTTTaGTGCTGGGACACTGTAGCCTACACTGTGGTCTCATACTCCAGC +
Preference number: 6 (lower is better)
Translates to: GTTLRRMWDQPSLSL*CWDTVAYTVVSYSS
Trigger: GCTGGAGTATGAGACCACAGTGTAGGCTACAGTGTCCCAGCACAAAAGGGACAGGCTTGGCTGATCCCACATCCGCCGCAGTGTTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp CACTACGCAGACCATGATGAGCGAGTAGAAGTCGGTTaGGAAGTTGCGGCTGGAGTACCAGAAGCCGGTGAG +
Preference number: 6 (lower is better)
Translates to: HYADHDERVEVG*EVAAGVPEAGE
Trigger: CTCACCGGCTTCTGGTACTCCAGCCGCAACTTCTCAACCGACTTCTACTCGCTCATCATGGTCTGCGTAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS CCA 72 bp CGGATGTGGGATCAGCCAAGCCTGTCCCTTTTGTGCTaGGACACTGTAGCCTACACTGTGGTCTCATACTCC +
Preference number: 6 (lower is better)
Translates to: RMWDQPSLSLLC*DTVAYTVVSYS
Trigger: GGAGTATGAGACCACAGTGTAGGCTACAGTGTCCCAGCACAAAAGGGACAGGCTTGGCTGATCCCACATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3
CDS TCA 72 bp GCCCATTGGGGTGCAGGAGACAGTAGTAGACACACATaGAGAATATGCCCAGCGCAAAGCTGGAGGCCACTA +
Preference number: 6 (lower is better)
Translates to: AHWGAGDSSRHT*RICPAQSWRPL
Trigger: TAGTGGCCTCCAGCTTTGCGCTGGGCATATTCTTCATGTGTGTCTACTACTGTCTCCTGCACCCCAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562532.3